View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12148_high_10 (Length: 237)
Name: NF12148_high_10
Description: NF12148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12148_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 33250877 - 33251083
Alignment:
| Q |
15 |
gacaccatttcgtccacaaaatcagaaaaatcctaaaattagaaacaaggcatgtttttcagaaccataataatataacaaactaataaacaaaaaagaa |
114 |
Q |
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| T |
33250877 |
gacaccatttcgtccacaaaatcagaaaaatcctaaaattagaaacaatgcatgtctttcagcaccataataatataacaaactaataaacaaaaacgaa |
33250976 |
T |
|
| Q |
115 |
acaatcttcaaggaaaactacaggaaaattttccataagcacataattacctcaacttcttcctcttgaggatcatacaagccagcatcgtacatacttc |
214 |
Q |
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|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33250977 |
acaatcttcaagaaaaactacaggaaaaatttccataagcacataattacctcaacttcttcctcttgaggatcatacaagccagcatcgtacatacttc |
33251076 |
T |
|
| Q |
215 |
ttttctt |
221 |
Q |
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||||||| |
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| T |
33251077 |
ttttctt |
33251083 |
T |
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