View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12152_high_10 (Length: 326)
Name: NF12152_high_10
Description: NF12152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12152_high_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 28063955 - 28064280
Alignment:
| Q |
1 |
gatgaattttcaaattaatgaagtttaagaaaaactagatttatttgtgattttccagatagaaacaacaataccaccagaaaattttacaccaaggata |
100 |
Q |
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| T |
28063955 |
gatgaattttcaaattaataaagtttaagaaaaactatatttatttgtgattttccagatagaaacaacaataccaccagaaaattttacaccaaggata |
28064054 |
T |
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| Q |
101 |
gtagacaggactgaagactatcttagggtggagtaccaaagcccaatcttgggggtatgtgcgtaatttaattctctcataatgaaatttaccttattat |
200 |
Q |
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| T |
28064055 |
gtagacaggactgaagactatcttagggtggagtaccaaagcccaatcttgggggtatgtgcgtaatttaattctctcataatgaaatttaccttattat |
28064154 |
T |
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| Q |
201 |
ttataaatttatgctatcaagtattttaagacttttgttgggttataaagaaccaactttaacaannnnnnnagtattcaaacagtttgtggatgatgtt |
300 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
28064155 |
ttataaatttatgctaacaagtattttaagacttttgttgggttataaagaaccaactttaacaatttttttagtattcaaacagtttgtggatgatgtt |
28064254 |
T |
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| Q |
301 |
gagttctggtttccacaagataagga |
326 |
Q |
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|||||||||||||||||||||||||| |
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| T |
28064255 |
gagttctggtttccacaagataagga |
28064280 |
T |
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