View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12155_high_7 (Length: 210)
Name: NF12155_high_7
Description: NF12155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12155_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 45299744 - 45299590
Alignment:
| Q |
15 |
ggtatagtttggtaagagagtgatggtagcattaaattaatttagaaaatgtgaggctaactatgagttagattactttggcatgaggcaaaggcaattt |
114 |
Q |
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| T |
45299744 |
ggtatagtttggtaagagagtgatggtagcattaaattaatttagaaaatgtgaggctaactatgagttagattactttggcatgaggcaaaggcaattt |
45299645 |
T |
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| Q |
115 |
actatcaccgctagtttaatacaatttgaagcacattcattaaagacgatgcaat |
169 |
Q |
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| T |
45299644 |
actatcaccgctagtttaatacaatttgaagcacattcattaaagacgatgcaat |
45299590 |
T |
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