View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12157_high_2 (Length: 245)
Name: NF12157_high_2
Description: NF12157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12157_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 44043323 - 44043552
Alignment:
| Q |
1 |
atccgatctgttctcgatcatgttgttttcaatctgatttttacgttttctattaattttgattagatcacaattaagctggatattctgtttagacttt |
100 |
Q |
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| T |
44043323 |
atccgatctgttctcgatcatgttgttttcaatctgatttttacgttttctattaattttgattagatcacaattaagctggatattctgtgtagacttt |
44043422 |
T |
|
| Q |
101 |
gcatgttcgcatcaaatttcataaactatattgcttaatcattatctccaatcacattgtaatttaatttatatttctcgatacctgcatctgatttttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
44043423 |
gcatgttcgcatcaaatttcataaactatattgcttaatcattatctccaatcacattgtaatttaatttatatttctcgatccctgcatctgatttttt |
44043522 |
T |
|
| Q |
201 |
tagtttttatcatcaactgtgattagatca |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
44043523 |
tagtttttatcatcaactgtgattagatca |
44043552 |
T |
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