View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12162_high_8 (Length: 360)

Name: NF12162_high_8
Description: NF12162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12162_high_8
NF12162_high_8
[»] chr3 (16 HSPs)
chr3 (243-321)||(23054437-23054515)
chr3 (214-258)||(2025290-2025334)
chr3 (217-257)||(53057645-53057685)
chr3 (215-258)||(28165378-28165421)
chr3 (217-291)||(17229981-17230055)
chr3 (216-258)||(17910796-17910838)
chr3 (216-258)||(17960804-17960846)
chr3 (216-258)||(19888144-19888186)
chr3 (216-257)||(3237890-3237931)
chr3 (217-258)||(4433164-4433205)
chr3 (217-258)||(15663528-15663569)
chr3 (217-258)||(21735576-21735617)
chr3 (217-258)||(22150404-22150445)
chr3 (218-258)||(2560383-2560423)
chr3 (217-257)||(14954607-14954647)
chr3 (217-257)||(28581292-28581332)
[»] scaffold0014 (1 HSPs)
scaffold0014 (217-259)||(112795-112837)
[»] chr4 (13 HSPs)
chr4 (217-320)||(18949668-18949773)
chr4 (217-257)||(41115688-41115728)
chr4 (219-257)||(15736016-15736054)
chr4 (216-258)||(31267586-31267628)
chr4 (216-258)||(33377562-33377604)
chr4 (216-258)||(49002775-49002817)
chr4 (217-258)||(5872796-5872837)
chr4 (217-258)||(11514459-11514500)
chr4 (217-258)||(14836898-14836939)
chr4 (217-258)||(19570440-19570481)
chr4 (217-249)||(18773282-18773314)
chr4 (217-257)||(19611248-19611288)
chr4 (217-257)||(40859900-40859940)
[»] chr6 (15 HSPs)
chr6 (216-257)||(14101358-14101399)
chr6 (213-257)||(26588790-26588834)
chr6 (219-257)||(30372574-30372612)
chr6 (219-257)||(32335030-32335068)
chr6 (216-258)||(32756755-32756797)
chr6 (217-258)||(7752040-7752081)
chr6 (217-258)||(12352932-12352973)
chr6 (216-257)||(15301412-15301453)
chr6 (217-258)||(16124335-16124376)
chr6 (217-258)||(19453469-19453510)
chr6 (217-258)||(19833901-19833942)
chr6 (217-258)||(21034236-21034277)
chr6 (217-258)||(28252365-28252406)
chr6 (217-258)||(33866498-33866539)
chr6 (217-257)||(15551235-15551275)
[»] chr2 (14 HSPs)
chr2 (222-323)||(31955529-31955633)
chr2 (217-259)||(31328836-31328878)
chr2 (217-259)||(31335557-31335599)
chr2 (217-258)||(1041528-1041569)
chr2 (215-244)||(19355685-19355714)
chr2 (217-258)||(24450315-24450356)
chr2 (217-258)||(28702088-28702129)
chr2 (217-258)||(28732712-28732753)
chr2 (217-258)||(45087861-45087902)
chr2 (217-257)||(6391861-6391901)
chr2 (217-257)||(19539647-19539687)
chr2 (217-257)||(22797604-22797644)
chr2 (215-259)||(24851535-24851579)
chr2 (217-257)||(28551785-28551825)
[»] scaffold0072 (1 HSPs)
scaffold0072 (123-187)||(10551-10615)
[»] chr7 (19 HSPs)
chr7 (214-258)||(6045152-6045196)
chr7 (215-258)||(1559965-1560008)
chr7 (217-258)||(4433462-4433503)
chr7 (217-258)||(13259365-13259406)
chr7 (217-258)||(14746541-14746582)
chr7 (216-257)||(16557533-16557574)
chr7 (216-257)||(16608088-16608129)
chr7 (217-258)||(18440584-18440625)
chr7 (217-258)||(21284296-21284337)
chr7 (217-258)||(24883265-24883306)
chr7 (217-257)||(2499223-2499263)
chr7 (217-257)||(4493739-4493779)
chr7 (217-257)||(9761886-9761925)
chr7 (217-257)||(10884093-10884133)
chr7 (217-257)||(11792065-11792105)
chr7 (217-257)||(21382351-21382391)
chr7 (216-244)||(21691616-21691644)
chr7 (217-257)||(33604099-33604139)
chr7 (217-257)||(48806806-48806846)
[»] chr5 (11 HSPs)
chr5 (217-257)||(22000929-22000969)
chr5 (214-257)||(33021842-33021885)
chr5 (217-258)||(3246362-3246403)
chr5 (217-258)||(13533176-13533217)
chr5 (217-258)||(17456621-17456662)
chr5 (217-258)||(21702433-21702474)
chr5 (217-258)||(23477571-23477612)
chr5 (217-258)||(37395362-37395403)
chr5 (217-258)||(40033682-40033723)
chr5 (217-257)||(21199913-21199953)
chr5 (217-257)||(31487403-31487443)
[»] chr1 (11 HSPs)
chr1 (214-257)||(23975682-23975725)
chr1 (217-258)||(16634411-16634452)
chr1 (217-258)||(19037165-19037206)
chr1 (217-258)||(19171207-19171248)
chr1 (216-257)||(22153020-22153061)
chr1 (216-257)||(32786782-32786823)
chr1 (216-257)||(48571095-48571136)
chr1 (217-258)||(51657285-51657326)
chr1 (217-257)||(7308986-7309026)
chr1 (217-257)||(30892260-30892300)
chr1 (214-258)||(46181689-46181733)
[»] scaffold0267 (1 HSPs)
scaffold0267 (216-258)||(7187-7229)
[»] scaffold0037 (1 HSPs)
scaffold0037 (217-255)||(76448-76486)
[»] scaffold0007 (2 HSPs)
scaffold0007 (216-257)||(59966-60008)
scaffold0007 (219-259)||(63534-63574)
[»] chr8 (11 HSPs)
chr8 (217-259)||(17007500-17007542)
chr8 (217-258)||(40213991-40214032)
chr8 (217-258)||(45539404-45539445)
chr8 (217-257)||(1210621-1210661)
chr8 (217-257)||(13431539-13431579)
chr8 (217-257)||(17287084-17287124)
chr8 (217-257)||(17541410-17541450)
chr8 (217-257)||(18565166-18565206)
chr8 (217-257)||(18676847-18676887)
chr8 (214-258)||(40002372-40002416)
chr8 (217-257)||(43773308-43773348)
[»] scaffold0752 (1 HSPs)
scaffold0752 (217-258)||(614-655)
[»] scaffold0471 (1 HSPs)
scaffold0471 (216-257)||(2650-2691)
[»] scaffold0391 (1 HSPs)
scaffold0391 (217-258)||(3050-3091)
[»] scaffold0205 (1 HSPs)
scaffold0205 (216-257)||(826-867)
[»] scaffold0116 (1 HSPs)
scaffold0116 (217-258)||(21808-21849)
[»] scaffold0068 (1 HSPs)
scaffold0068 (217-258)||(11436-11477)
[»] scaffold0047 (1 HSPs)
scaffold0047 (217-258)||(33732-33773)
[»] scaffold0038 (1 HSPs)
scaffold0038 (217-258)||(52565-52606)
[»] scaffold0002 (2 HSPs)
scaffold0002 (217-258)||(476164-476205)
scaffold0002 (217-258)||(482684-482725)
[»] scaffold0622 (1 HSPs)
scaffold0622 (215-255)||(1861-1901)
[»] scaffold0084 (1 HSPs)
scaffold0084 (217-257)||(31786-31826)
[»] scaffold0045 (1 HSPs)
scaffold0045 (217-257)||(88473-88513)
[»] scaffold0022 (2 HSPs)
scaffold0022 (217-257)||(36626-36666)
scaffold0022 (217-257)||(134686-134726)


Alignment Details
Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 23054515 - 23054437
Alignment:
Q  243 ggtttgagttgtgtttgacacttttgcaactcttttgaaaacacaaataggagcggaaagtatagagataagggaaaga 321  Q
    ||||||| || | |||||||||||||||| | |||||||||||||||||| |||| | |||| ||||||||| ||||||    
T  23054515 ggtttgaattatatttgacacttttgcaatttttttgaaaacacaaatagcagcgaagagtaaagagataagagaaaga 23054437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 2025290 - 2025334
Alignment:
Q  214 aactgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||    
T  2025290 aactgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 2025334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 53057685 - 53057645
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  53057685 tgaaggtgagaaaaacacaagaaagggggttgaattgtgtt 53057645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 28165378 - 28165421
Alignment:
Q  215 actgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||    
T  28165378 actgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 28165421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 17229981 - 17230055
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtttgacacttttgcaactcttttgaaaacacaaata 291  Q
    |||||||||||||||||||| |||||  ||||| ||||||| ||   ||||||||||||||  |||| |||||||    
T  17229981 tgaaggtgagaaaaacacaaaaaaggaatttgaattgtgttcgatggttttgcaactctttcaaaaatacaaata 17230055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 17910838 - 17910796
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  17910838 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 17910796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 17960804 - 17960846
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  17960804 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 17960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 19888186 - 19888144
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  19888186 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 19888144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 3237890 - 3237931
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  3237890 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 3237931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 4433164 - 4433205
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  4433164 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 4433205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 15663569 - 15663528
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  15663569 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 15663528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 21735576 - 21735617
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  21735576 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 21735617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 22150404 - 22150445
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  22150404 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 22150445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 2560383 - 2560423
Alignment:
Q  218 gaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||| |||| |||| ||||||||    
T  2560383 gaaggtgagaaaaacacaagaaggggggttgaattgtgttt 2560423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 14954607 - 14954647
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  14954607 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 14954647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 28581292 - 28581332
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  28581292 tgaaggtgagaaaaacacaagaatgggggttgaattgtgtt 28581332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 112837 - 112795
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtttg 259  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  112837 tgaaggtgagaaaaacacaagaaagggggttgaattgtgtttg 112795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 18949668 - 18949773
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaagggg--tttgagttgtgtttgacacttttgcaactcttttgaaaacacaaataggagcggaaagtatagagataag 314  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||| || |||||| |||||||| ||| | | | |||  || |||||||| ||| |||||    
T  18949668 tgaaggtgagaaaaatacaagaaaggggattttgaattgtgtttaacgcttttgaaactctttagaagatatagataacagtggaaagtaaagatataag 18949767  T
Q  315 ggaaag 320  Q
    ||||||    
T  18949768 ggaaag 18949773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 41115728 - 41115688
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  41115728 tgaaggtgagaaaaacacaagaagggggtttgaattgtgtt 41115688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 15736016 - 15736054
Alignment:
Q  219 aaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  15736016 aaggtgagaaaaacacaagaaagggggttgaattgtgtt 15736054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 31267628 - 31267586
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  31267628 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 31267586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 33377562 - 33377604
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  33377562 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 33377604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 49002817 - 49002775
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  49002817 ctgaaggtgagaaaaacacaagaatgggggttgaattgtgttt 49002775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 5872796 - 5872837
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  5872796 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 5872837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 11514459 - 11514500
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  11514459 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 11514500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 14836939 - 14836898
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  14836939 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 14836898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 19570440 - 19570481
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  19570440 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 19570481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 18773282 - 18773314
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttga 249  Q
    |||||||||||||||||||||||||||| ||||    
T  18773282 tgaaggtgagaaaaacacaagaaagggggttga 18773314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 19611288 - 19611248
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  19611288 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 19611248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 40859900 - 40859940
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  40859900 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 40859940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 14101399 - 14101358
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  14101399 ctgaaggtgagaaaaacacaagaaagggggttgaattgtgtt 14101358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 26588790 - 26588834
Alignment:
Q  213 taactgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||    
T  26588790 taactgaaggtgagaaaaacacaagaatgggggttgaattgtgtt 26588834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 30372574 - 30372612
Alignment:
Q  219 aaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  30372574 aaggtgagaaaaacacaagaaagggggttgaattgtgtt 30372612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 32335030 - 32335068
Alignment:
Q  219 aaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  32335030 aaggtgagaaaaacacaagaaagggggttgaattgtgtt 32335068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 32756755 - 32756797
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  32756755 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 32756797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 7752081 - 7752040
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  7752081 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 7752040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 12352932 - 12352973
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  12352932 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 12352973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 15301412 - 15301453
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  15301412 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 15301453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 16124376 - 16124335
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  16124376 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 16124335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 19453510 - 19453469
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  19453510 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 19453469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 19833942 - 19833901
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  19833942 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 19833901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 21034236 - 21034277
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  21034236 tgaaggtgagaaaaacacaagaacgggggttgaattgtgttt 21034277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 28252406 - 28252365
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  28252406 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 28252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 33866498 - 33866539
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  33866498 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 33866539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 15551235 - 15551275
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  15551235 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 15551275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 323
Target Start/End: Complemental strand, 31955633 - 31955529
Alignment:
Q  222 gtgagaaaaacacaagaaagg--ggtttgagttgtgtttgac-acttttgcaactcttttgaaaacacaaataggagcggaaagtatagagataagggaa 318  Q
    ||||||||||||||||||| |  ||||| | ||||||||| | | ||||| ||||| ||  || ||||| |||| ||||||||||| |||||||||||||    
T  31955633 gtgagaaaaacacaagaaatgagggttttaattgtgtttgtcgatttttgtaactcattaaaacacacagatagcagcggaaagtaaagagataagggaa 31955534  T
Q  319 agaaa 323  Q
    |||||    
T  31955533 agaaa 31955529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 31328878 - 31328836
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtttg 259  Q
    ||||||||||||||||||||||| |||| |||| |||||||||    
T  31328878 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtttg 31328836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 31335599 - 31335557
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtttg 259  Q
    ||||||||||||||||||||||| |||| |||| |||||||||    
T  31335599 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtttg 31335557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 1041528 - 1041569
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  1041528 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 1041569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 244
Target Start/End: Original strand, 19355685 - 19355714
Alignment:
Q  215 actgaaggtgagaaaaacacaagaaagggg 244  Q
    ||||||||||||||||||||||||||||||    
T  19355685 actgaaggtgagaaaaacacaagaaagggg 19355714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 24450356 - 24450315
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  24450356 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 24450315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 28702129 - 28702088
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  28702129 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 28702088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 28732753 - 28732712
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  28732753 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 28732712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 45087902 - 45087861
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  45087902 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 45087861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 6391861 - 6391901
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  6391861 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 6391901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 19539647 - 19539687
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  19539647 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 19539687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 22797604 - 22797644
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  22797604 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 22797644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 24851579 - 24851535
Alignment:
Q  215 actgaaggtgagaaaaacacaagaaaggggtttgagttgtgtttg 259  Q
    ||||||||||||||||||||||||| | || |||| |||||||||    
T  24851579 actgaaggtgagaaaaacacaagaaggagggttgaattgtgtttg 24851535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 28551825 - 28551785
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  28551825 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 28551785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 10551 - 10615
Alignment:
Q  123 gacatatcattggtgttggaaggaggggcggttagtgattctcaacatatttcttcaaatccttc 187  Q
    |||| |||||||||| | ||||||||||||||||| |||| ||| || ||||| |||||||||||    
T  10551 gacagatcattggtgctagaaggaggggcggttagcgattttcatcaaatttcctcaaatccttc 10615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 6045196 - 6045152
Alignment:
Q  214 aactgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||    
T  6045196 aactgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 6045152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 1560008 - 1559965
Alignment:
Q  215 actgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||    
T  1560008 actgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 1559965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 4433503 - 4433462
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  4433503 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 4433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 13259406 - 13259365
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  13259406 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 13259365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 14746582 - 14746541
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  14746582 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 14746541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 16557574 - 16557533
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  16557574 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 16557533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 16608088 - 16608129
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  16608088 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 16608129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 18440584 - 18440625
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  18440584 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 18440625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 21284337 - 21284296
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  21284337 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 21284296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 24883306 - 24883265
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  24883306 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 24883265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 2499223 - 2499263
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  2499223 tgaaggtgagaaaaacacaagaagggggattgaattgtgtt 2499263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 4493739 - 4493779
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  4493739 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 4493779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 9761886 - 9761925
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  9761886 tgaaggtgagaaaaacacaag-aaggggtttgaattgtgtt 9761925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 10884133 - 10884093
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  10884133 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 10884093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 11792065 - 11792105
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  11792065 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 11792105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 21382391 - 21382351
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  21382391 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 21382351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 244
Target Start/End: Original strand, 21691616 - 21691644
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaagggg 244  Q
    |||||||||||||||||||||||||||||    
T  21691616 ctgaaggtgagaaaaacacaagaaagggg 21691644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 33604099 - 33604139
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  33604099 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 33604139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 48806846 - 48806806
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  48806846 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 48806806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 22000969 - 22000929
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  22000969 tgaaggtgagaaaaacacaagaaggggggttgagttgtgtt 22000929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 33021842 - 33021885
Alignment:
Q  214 aactgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||||| |||| |||| |||||||    
T  33021842 aactgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 33021885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 3246403 - 3246362
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  3246403 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 3246362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 13533176 - 13533217
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  13533176 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 13533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 17456621 - 17456662
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  17456621 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 17456662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 21702433 - 21702474
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  21702433 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 21702474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 23477571 - 23477612
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  23477571 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 23477612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 37395362 - 37395403
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  37395362 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 37395403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 40033723 - 40033682
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  40033723 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 40033682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 21199953 - 21199913
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  21199953 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 21199913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 31487403 - 31487443
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  31487403 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 31487443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000008; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 23975725 - 23975682
Alignment:
Q  214 aactgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||||| |||| |||| |||||||    
T  23975725 aactgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 23975682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 16634411 - 16634452
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||| ||||||||||||| |||||||||||||| |||||    
T  16634411 tgaaggtaagaaaaacacaagtaaggggtttgagttatgttt 16634452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 19037165 - 19037206
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  19037165 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 19037206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 19171248 - 19171207
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  19171248 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 19171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 22153020 - 22153061
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  22153020 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 22153061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 32786823 - 32786782
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  32786823 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 32786782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 48571136 - 48571095
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  48571136 ctgaaggtgagaaaaacacaagaatgggggttgaattgtgtt 48571095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 51657326 - 51657285
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  51657326 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 51657285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 7308986 - 7309026
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  7308986 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 7309026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 30892260 - 30892300
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  30892260 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 30892300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 46181733 - 46181689
Alignment:
Q  214 aactgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||||||  ||| |||| ||||||||    
T  46181733 aactgaaggtgagaaaaacacaagaagaggggttgaattgtgttt 46181689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 7229 - 7187
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  7229 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 76448 - 76486
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtg 255  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  76448 tgaaggtgagaaaaacacaagaagggggtttgaattgtg 76486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 60008 - 59966
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggt-ttgagttgtgtt 257  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  60008 ctgaaggtgagaaaaacacaagaaaggggtgttgaattgtgtt 59966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 63534 - 63574
Alignment:
Q  219 aaggtgagaaaaacacaagaaaggggtttgagttgtgtttg 259  Q
    ||||||||||||||||||||| |||| |||| |||||||||    
T  63534 aaggtgagaaaaacacaagaaggggggttgaattgtgtttg 63574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 17007500 - 17007542
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtttg 259  Q
    ||||||||||||||||||||||| |||| |||| |||||||||    
T  17007500 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtttg 17007542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 40214032 - 40213991
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  40214032 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 40213991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 45539445 - 45539404
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  45539445 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 45539404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 1210661 - 1210621
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  1210661 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 1210621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 13431579 - 13431539
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  13431579 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 13431539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 17287124 - 17287084
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  17287124 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 17287084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 17541450 - 17541410
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  17541450 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 17541410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 18565166 - 18565206
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  18565166 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 18565206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 18676847 - 18676887
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  18676847 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 18676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 40002372 - 40002416
Alignment:
Q  214 aactgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||| |||||||||||||| |||| |||| ||||||||    
T  40002372 aactgaaggtgggaaaaacacaagaaggggggttgaattgtgttt 40002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 43773308 - 43773348
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  43773308 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 43773348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 614 - 655
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  614 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 2650 - 2691
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  2650 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 2691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 3091 - 3050
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  3091 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 3050  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 867 - 826
Alignment:
Q  216 ctgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  867 ctgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 826  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 21849 - 21808
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  21849 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 21808  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 11477 - 11436
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  11477 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 11436  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 33773 - 33732
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  33773 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 33732  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 52606 - 52565
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  52606 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 52565  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 476205 - 476164
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  476205 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 476164  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 482725 - 482684
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgttt 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  482725 tgaaggtgagaaaaacacaagaaggggggttgaattgtgttt 482684  T

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Target: scaffold0622 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 1861 - 1901
Alignment:
Q  215 actgaaggtgagaaaaacacaagaaaggggtttgagttgtg 255  Q
    ||||||||||||||||||||||||| |||| |||| |||||    
T  1861 actgaaggtgagaaaaacacaagaaggggggttgaattgtg 1901  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 31786 - 31826
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  31786 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 31826  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 88513 - 88473
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  88513 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 88473  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 36626 - 36666
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  36626 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 36666  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 134686 - 134726
Alignment:
Q  217 tgaaggtgagaaaaacacaagaaaggggtttgagttgtgtt 257  Q
    ||||||||||||||||||||||| |||| |||| |||||||    
T  134686 tgaaggtgagaaaaacacaagaaggggggttgaattgtgtt 134726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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