View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12163_low_8 (Length: 249)
Name: NF12163_low_8
Description: NF12163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12163_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 21 - 228
Target Start/End: Complemental strand, 41214852 - 41214645
Alignment:
| Q |
21 |
aagactggtaaaactgaaaactttttagcttgagtggagaatcaagcaagatggtaataagaaattgagaaaaagtttgccgtaacactattatccaaca |
120 |
Q |
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| T |
41214852 |
aagactggtaaaactgaaaactttttagcttgagtggagaatcaagcaagatggtaataagaaattgataaaaagtttgccgtaacactattatccaaca |
41214753 |
T |
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| Q |
121 |
actacatggaaaaggacagtgttcatttcatctagaccaaattcaaggaaatgacaaaggttcaaattaagatggattttacaagttgtggtagatatat |
220 |
Q |
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| T |
41214752 |
actacatggaaaaggacagtgttcatttcatctagactaaatacaaggaaatgacaaaggttcaaattaagatggattttacaagttgtggtagatatat |
41214653 |
T |
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| Q |
221 |
atgttttt |
228 |
Q |
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|||||||| |
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| T |
41214652 |
atgttttt |
41214645 |
T |
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