View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12167_high_4 (Length: 310)
Name: NF12167_high_4
Description: NF12167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12167_high_4 |
 |  |
|
| [»] scaffold0392 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 36613965 - 36613750
Alignment:
| Q |
11 |
caaagggaagcgacgcaaccataaccataatttaaatccttgatcaagttatccacaacacaacaacaattatcatgtcttacccactaagtggggttgg |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36613965 |
caaagggaagcgacgcaaccataaccataatttaaatccttgatcaagttatccacaacacaacaacaattatcatgtcttacccactaagtggggttgg |
36613866 |
T |
 |
| Q |
111 |
ctacatggatcaacttacatcgcaatctcctatcatataccgtatttatatcgaacacgttaatctctagatatttctgaatggttagtttttcggggtc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
36613865 |
ctacatggatcaacttacatcgcaatctcctatcatataccgtatttatatccaacacgttaatctctagatatttctgaatggttagtttttccgggtc |
36613766 |
T |
 |
| Q |
211 |
ttccccccttgcatata |
227 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
36613765 |
ttc-ccccttgcatata |
36613750 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 36613618 - 36613560
Alignment:
| Q |
223 |
atataaacattgaacaaacacatagggacattgaattccaaccaatgaataaacaaaca |
281 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36613618 |
atataaacattgaacaaacacatagggacattgaattccaaccaatgaataaacaaaca |
36613560 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 4604808 - 4604778
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
4604808 |
cccactaagtggggttggctacatggatcaa |
4604778 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 49029537 - 49029507
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
49029537 |
cccactaagtggggttggctacatggatcaa |
49029507 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 7221016 - 7220987
Alignment:
| Q |
94 |
ccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
7221016 |
ccactaagtggggttggctacatggatcaa |
7220987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 2885743 - 2885779
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
2885743 |
cccactaagtggggtcggctacatggatcaaattaca |
2885779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 14057736 - 14057704
Alignment:
| Q |
96 |
actaagtggggttggctacatggatcaacttac |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
14057736 |
actaagtggggttggctacatggatcaaattac |
14057704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 14367764 - 14367732
Alignment:
| Q |
96 |
actaagtggggttggctacatggatcaacttac |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
14367764 |
actaagtggggttggctacatggatcaaattac |
14367732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 123
Target Start/End: Complemental strand, 15682433 - 15682405
Alignment:
| Q |
95 |
cactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15682433 |
cactaagtggggttggctacatggatcaa |
15682405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 30200032 - 30200080
Alignment:
| Q |
140 |
ctatcatataccgtatttatatcgaacacgttaatctctagatatttct |
188 |
Q |
| |
|
|||||||||||| |||||||||| ||| | ||||||||||||| ||||| |
|
|
| T |
30200032 |
ctatcatataccatatttatatcaaactcattaatctctagatctttct |
30200080 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 388283 - 388369
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttacatcgcaatctcctatcatataccgtatttatatcgaacacgttaatctcta |
179 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||| || ||| |||||||||||||||||| |||| || | |||||||||| |
|
|
| T |
388283 |
cccactaagtggggttggctacattgatcaaattacgtcataatgctctatcatataccgtatttctatcttactcattaatctcta |
388369 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 52882683 - 52882718
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttac |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |
|
|
| T |
52882683 |
cccactaagtggggttggctacatggatcaaattac |
52882718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 45834621 - 45834651
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
45834621 |
cccactaagtggggttggctacatggatcaa |
45834651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 47555353 - 47555383
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
47555353 |
cccactaagtggggttggctacatggatcaa |
47555383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 24778630 - 24778666
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
24778630 |
cccactaagtggggtcggctacatggatcaaattaca |
24778666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 36304220 - 36304132
Alignment:
| Q |
100 |
agtggggttggctacatggatcaacttacatcgcaatctcctatcatataccgtatttatatcgaacacgttaatctctagatatttct |
188 |
Q |
| |
|
|||||||| ||||||||||||||| |||| | ||| |||||||||| ||| ||||| ||| ||| | ||||||||||||| ||||| |
|
|
| T |
36304220 |
agtggggtcggctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttct |
36304132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 46148290 - 46148254
Alignment:
| Q |
92 |
acccactaagtggggttggctacatggatcaacttac |
128 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
46148290 |
acccactaagtggggtcggctacatggatcaaattac |
46148254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 50960658 - 50960694
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
50960658 |
cccactaagtggggttggctaaatggatcaaattaca |
50960694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 41894334 - 41894298
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
41894334 |
cccactaagtggggttggctacatggatcaaattaca |
41894298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 1287600 - 1287632
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaact |
125 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |
|
|
| T |
1287600 |
cccactaagtggggtcggctacatggatcaact |
1287632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 25575085 - 25574990
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttacatcgcaatctcctatcatataccgtatttatatcgaacacgttaatctctagatatttct |
188 |
Q |
| |
|
|||||||| |||||| |||||||||||||| ||||| | |||| | |||||||| ||| ||||| ||| ||| | ||||||||||||| ||||| |
|
|
| T |
25575085 |
cccactaaatggggtctgctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcattaatctctagatctttct |
25574990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 13805286 - 13805316
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
13805286 |
cccactaagtggggttggctacatggatcaa |
13805316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 54470468 - 54470438
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
54470468 |
cccactaagtggggttggctacatggatcaa |
54470438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 7947198 - 7947161
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttacat |
130 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
7947198 |
cccactaagtggggtcggctacatggatcaaattacat |
7947161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 50862892 - 50862856
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
50862892 |
cccactaagtggggtcggctacatggatcaaattaca |
50862856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 123
Target Start/End: Complemental strand, 55579290 - 55579262
Alignment:
| Q |
95 |
cactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
55579290 |
cactaagtggggttggctacatggatcaa |
55579262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 9496127 - 9496092
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttac |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9496127 |
cccactaagtggggttggctacatggatcaaattac |
9496092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 7326181 - 7326211
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
7326181 |
cccactaagtggggttggctacatggatcaa |
7326211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 3720436 - 3720472
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
3720436 |
cccactaagtggggtcggctacatggatcaaattaca |
3720472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 32; Significance: 0.000000007; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 40568431 - 40568466
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttac |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |
|
|
| T |
40568431 |
cccactaagtggggttggctacatggatcaaattac |
40568466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 2914144 - 2914174
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2914144 |
cccactaagtggggttggctacatggatcaa |
2914174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 4001476 - 4001506
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
4001476 |
cccactaagtggggttggctacatggatcaa |
4001506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 15086183 - 15086153
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
15086183 |
cccactaagtggggttggctacatggatcaa |
15086153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 42337817 - 42337787
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
42337817 |
cccactaagtggggttggctacatggatcaa |
42337787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 50257829 - 50257795
Alignment:
| Q |
95 |
cactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
50257829 |
cactaagtggggttggctacatggatcaaattaca |
50257795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 51602317 - 51602287
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
51602317 |
cccactaagtggggttggctacatggatcaa |
51602287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 4590553 - 4590589
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
4590553 |
cccactaagtggggtcggctacatggatcaaattaca |
4590589 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 43481819 - 43481855
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
43481819 |
cccactaagtggggtcggctacatggatcaaattaca |
43481855 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0392 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0392
Description:
Target: scaffold0392; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 6793 - 6823
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
6793 |
cccactaagtggggttggctacatggatcaa |
6823 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 14742859 - 14742889
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
14742859 |
cccactaagtggggttggctacatggatcaa |
14742889 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 40813585 - 40813555
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
40813585 |
cccactaagtggggttggctacatggatcaa |
40813555 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 45419496 - 45419460
Alignment:
| Q |
93 |
cccactaagtggggttggctacatggatcaacttaca |
129 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
45419496 |
cccactaagtggggtcggctacatggatcaaattaca |
45419460 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 3206456 - 3206510
Alignment:
| Q |
70 |
acaacaacaattatcatgtctta-cccactaagtggggttggctacatggatcaa |
123 |
Q |
| |
|
||||||||||| | || |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
3206456 |
acaacaacaataaccaagtcttatcccactaagtggggtcggctacatggatcaa |
3206510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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