View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12167_low_1 (Length: 461)

Name: NF12167_low_1
Description: NF12167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12167_low_1
NF12167_low_1
[»] chr2 (30 HSPs)
chr2 (11-446)||(42639095-42639533)
chr2 (128-442)||(42634019-42634336)
chr2 (91-245)||(42628651-42628806)
chr2 (391-446)||(42628496-42628551)
chr2 (1-83)||(2256964-2257047)
chr2 (282-332)||(42628588-42628638)
chr2 (10-78)||(7302136-7302204)
chr2 (1-83)||(24592831-24592914)
chr2 (1-78)||(17736791-17736869)
chr2 (1-78)||(29798502-29798580)
chr2 (1-51)||(29133469-29133520)
chr2 (1-71)||(29809331-29809402)
chr2 (1-78)||(4927434-4927512)
chr2 (1-82)||(12599850-12599932)
chr2 (1-78)||(27412821-27412899)
chr2 (1-78)||(31815872-31815950)
chr2 (1-70)||(41859858-41859928)
chr2 (1-76)||(31397774-31397850)
chr2 (1-51)||(30762480-30762531)
chr2 (1-70)||(17778977-17779047)
chr2 (1-78)||(26999108-26999186)
chr2 (1-70)||(17413318-17413387)
chr2 (1-77)||(24393244-24393321)
chr2 (1-77)||(37265154-37265231)
chr2 (1-76)||(4238759-4238835)
chr2 (1-64)||(11175797-11175861)
chr2 (1-76)||(18324879-18324955)
chr2 (1-76)||(27152353-27152429)
chr2 (25-73)||(31156816-31156864)
chr2 (1-68)||(41748741-41748809)
[»] chr6 (19 HSPs)
chr6 (1-82)||(2655012-2655094)
chr6 (1-83)||(2726402-2726485)
chr6 (1-64)||(11456361-11456424)
chr6 (32-77)||(10497169-10497214)
chr6 (3-82)||(14679119-14679199)
chr6 (1-51)||(12582214-12582265)
chr6 (1-76)||(14609981-14610056)
chr6 (1-66)||(34828316-34828383)
chr6 (1-82)||(3373366-3373448)
chr6 (1-78)||(4494857-4494934)
chr6 (16-77)||(6610076-6610138)
chr6 (36-78)||(7885539-7885581)
chr6 (2-68)||(15364974-15365040)
chr6 (1-78)||(17935727-17935805)
chr6 (1-78)||(34701145-34701223)
chr6 (1-77)||(3808103-3808180)
chr6 (1-78)||(26320549-26320626)
chr6 (1-76)||(14296942-14297018)
chr6 (1-71)||(27080789-27080861)
[»] scaffold0062 (1 HSPs)
scaffold0062 (7-78)||(7472-7543)
[»] chr1 (32 HSPs)
chr1 (1-84)||(15602162-15602246)
chr1 (22-89)||(26498048-26498115)
chr1 (1-78)||(2613720-2613798)
chr1 (9-83)||(28031259-28031333)
chr1 (1-82)||(34766854-34766936)
chr1 (1-81)||(48646710-48646792)
chr1 (1-77)||(14520943-14521020)
chr1 (1-84)||(8736427-8736511)
chr1 (1-76)||(9265821-9265897)
chr1 (1-76)||(11410627-11410703)
chr1 (1-76)||(33153865-33153941)
chr1 (14-70)||(43840324-43840380)
chr1 (1-71)||(24529690-24529761)
chr1 (1-71)||(40227834-40227905)
chr1 (1-71)||(41973260-41973331)
chr1 (36-82)||(2889947-2889993)
chr1 (1-78)||(10356168-10356246)
chr1 (1-51)||(13096921-13096971)
chr1 (1-78)||(16033435-16033513)
chr1 (1-51)||(19533164-19533214)
chr1 (6-78)||(24752637-24752711)
chr1 (1-78)||(29042535-29042613)
chr1 (32-78)||(30678830-30678876)
chr1 (1-78)||(41763140-41763218)
chr1 (1-78)||(42045357-42045435)
chr1 (1-82)||(45773527-45773609)
chr1 (1-78)||(6219848-6219925)
chr1 (25-70)||(12852212-12852257)
chr1 (1-77)||(42888574-42888651)
chr1 (1-78)||(49130213-49130290)
chr1 (25-78)||(52267762-52267815)
chr1 (3-78)||(5280629-5280705)
[»] chr7 (22 HSPs)
chr7 (1-83)||(3830061-3830144)
chr7 (1-78)||(18505643-18505720)
chr7 (1-83)||(580911-580994)
chr7 (1-84)||(21993174-21993257)
chr7 (1-78)||(8883551-8883627)
chr7 (1-78)||(36428146-36428223)
chr7 (7-78)||(24839486-24839558)
chr7 (8-78)||(24225973-24226044)
chr7 (1-51)||(30753751-30753802)
chr7 (1-71)||(40187621-40187692)
chr7 (1-78)||(7388024-7388102)
chr7 (1-78)||(14046596-14046674)
chr7 (1-78)||(14356626-14356704)
chr7 (1-78)||(19416512-19416590)
chr7 (1-51)||(22777345-22777395)
chr7 (36-78)||(44454510-44454552)
chr7 (13-77)||(2916101-2916166)
chr7 (1-77)||(27263340-27263417)
chr7 (1-77)||(27772218-27772295)
chr7 (1-76)||(34722005-34722082)
chr7 (1-78)||(47342675-47342752)
chr7 (1-69)||(34343119-34343187)
[»] chr5 (33 HSPs)
chr5 (6-85)||(11720885-11720964)
chr5 (1-78)||(17046332-17046409)
chr5 (7-76)||(22498942-22499011)
chr5 (1-78)||(6489005-6489083)
chr5 (1-78)||(11637557-11637635)
chr5 (1-78)||(25509309-25509387)
chr5 (1-78)||(28207130-28207208)
chr5 (1-51)||(35412982-35413032)
chr5 (32-82)||(38043491-38043541)
chr5 (25-82)||(3389156-3389213)
chr5 (1-78)||(29178445-29178521)
chr5 (32-84)||(8682411-8682463)
chr5 (1-84)||(14124293-14124377)
chr5 (1-71)||(781868-781939)
chr5 (1-83)||(26409246-26409329)
chr5 (2-51)||(1257140-1257190)
chr5 (32-78)||(1512853-1512899)
chr5 (1-70)||(3156540-3156610)
chr5 (1-51)||(9595577-9595627)
chr5 (1-78)||(10032259-10032337)
chr5 (1-78)||(10227778-10227856)
chr5 (1-82)||(18391594-18391676)
chr5 (1-78)||(22665188-22665266)
chr5 (1-66)||(26655474-26655540)
chr5 (1-66)||(26927059-26927125)
chr5 (1-78)||(37932328-37932406)
chr5 (7-77)||(39914900-39914970)
chr5 (1-77)||(11647196-11647273)
chr5 (37-78)||(18995642-18995683)
chr5 (1-77)||(34702489-34702566)
chr5 (1-84)||(19647493-19647577)
chr5 (1-40)||(21376708-21376748)
chr5 (1-78)||(42515805-42515884)
[»] scaffold0350 (1 HSPs)
scaffold0350 (1-82)||(1242-1324)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-78)||(53365-53443)
[»] chr8 (17 HSPs)
chr8 (1-82)||(6038260-6038342)
chr8 (1-84)||(44293567-44293651)
chr8 (17-79)||(15188896-15188959)
chr8 (1-78)||(37872975-37873053)
chr8 (1-77)||(1244690-1244767)
chr8 (1-78)||(13286129-13286206)
chr8 (1-69)||(32944825-32944894)
chr8 (1-51)||(4756955-4757006)
chr8 (1-78)||(3650518-3650596)
chr8 (1-70)||(26886027-26886097)
chr8 (1-78)||(29376899-29376977)
chr8 (1-78)||(4757758-4757835)
chr8 (33-82)||(13272540-13272589)
chr8 (7-83)||(21557426-21557503)
chr8 (1-50)||(31685242-31685291)
chr8 (1-78)||(37570739-37570816)
chr8 (1-76)||(40679714-40679790)
[»] chr4 (27 HSPs)
chr4 (1-78)||(16431614-16431692)
chr4 (1-77)||(38374956-38375033)
chr4 (1-78)||(8494985-8495063)
chr4 (37-83)||(23619094-23619140)
chr4 (1-51)||(27655756-27655806)
chr4 (1-78)||(43034327-43034405)
chr4 (6-72)||(49949338-49949404)
chr4 (1-46)||(4963338-4963383)
chr4 (1-78)||(7030879-7030956)
chr4 (1-76)||(19908692-19908768)
chr4 (1-71)||(21318238-21318309)
chr4 (1-78)||(5318828-5318906)
chr4 (9-78)||(10303504-10303574)
chr4 (29-71)||(14197445-14197487)
chr4 (1-78)||(19588152-19588230)
chr4 (1-78)||(32180828-32180906)
chr4 (1-78)||(35287492-35287570)
chr4 (2-76)||(51458678-51458752)
chr4 (1-50)||(2587686-2587735)
chr4 (1-66)||(17656779-17656844)
chr4 (1-69)||(25101375-25101444)
chr4 (1-50)||(46120017-46120066)
chr4 (1-50)||(46133151-46133200)
chr4 (6-83)||(50937539-50937616)
chr4 (1-76)||(3936627-3936703)
chr4 (1-76)||(19854565-19854641)
chr4 (2-77)||(30780128-30780204)
[»] chr3 (41 HSPs)
chr3 (1-78)||(7464476-7464554)
chr3 (1-82)||(25441485-25441567)
chr3 (1-78)||(32909286-32909364)
chr3 (1-78)||(5186831-5186908)
chr3 (1-77)||(51882185-51882262)
chr3 (1-83)||(13829062-13829145)
chr3 (1-78)||(2186412-2186490)
chr3 (1-71)||(3176959-3177029)
chr3 (1-78)||(14827523-14827601)
chr3 (1-77)||(8113547-8113624)
chr3 (1-77)||(10922293-10922370)
chr3 (1-77)||(14771330-14771407)
chr3 (38-83)||(32957502-32957547)
chr3 (1-50)||(38309569-38309618)
chr3 (1-77)||(46469276-46469352)
chr3 (1-76)||(53996299-53996375)
chr3 (1-78)||(1149054-1149132)
chr3 (1-50)||(4947811-4947861)
chr3 (36-78)||(7738667-7738709)
chr3 (1-70)||(7827514-7827584)
chr3 (1-83)||(8942010-8942092)
chr3 (1-83)||(20465543-20465625)
chr3 (1-78)||(25340909-25340987)
chr3 (1-78)||(28244089-28244167)
chr3 (1-51)||(31138442-31138492)
chr3 (5-78)||(32843251-32843325)
chr3 (1-78)||(33633303-33633381)
chr3 (9-78)||(34442440-34442510)
chr3 (1-78)||(44579634-44579712)
chr3 (1-51)||(49088777-49088827)
chr3 (1-78)||(4216385-4216462)
chr3 (2-78)||(27432232-27432309)
chr3 (30-71)||(44968182-44968223)
chr3 (1-57)||(48657802-48657859)
chr3 (1-78)||(53706822-53706899)
chr3 (25-77)||(17588361-17588413)
chr3 (11-78)||(21506753-21506821)
chr3 (16-71)||(25505701-25505757)
chr3 (1-76)||(38130944-38131020)
chr3 (22-78)||(41442933-41442989)
chr3 (6-70)||(46226068-46226132)
[»] scaffold1063 (1 HSPs)
scaffold1063 (27-78)||(1072-1123)
[»] scaffold1160 (1 HSPs)
scaffold1160 (1-70)||(1697-1767)
[»] scaffold0576 (1 HSPs)
scaffold0576 (2-68)||(9745-9811)
[»] scaffold0735 (1 HSPs)
scaffold0735 (1-77)||(1527-1604)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-66)||(118601-118666)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-51)||(7004-7056)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-76)||(161141-161217)
[»] scaffold0011 (1 HSPs)
scaffold0011 (7-78)||(185261-185333)


Alignment Details
Target: chr2 (Bit Score: 385; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 11 - 446
Target Start/End: Complemental strand, 42639533 - 42639095
Alignment:
Q  11 ggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac---tagggtcgtgtttatgaacacacat 107  Q
    ||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||||||| |||   ||||||| |||||||||||||||||    
T  42639533 ggccggggttcgaacccaggtcttacctatttcatgcattgtccctacaaactgagctaagttcacgaggacaactagggtcttgtttatgaacacacat 42639434  T
Q  108 aacatgtgatattaatgttgtgcagatttttgctatactgaagagattgatggtccatcaaaggactactgtgatgaaggcaacacagagtggccatgtg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42639433 aacatgtgatattaatgttgtgcagatttttgctatactgaagagattgatggtccatcaaaggactactgtgatgaaggcaacacagagtggccatgtg 42639334  T
Q  208 cccctaacaaaggttactatggtcgtggaccgattcaacttccttggaactacaactatggaccagctggaagagacaatggttttgatggattgaactc 307  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42639333 cccctaacaaaggttactatggtcgtggaccgattcaactatcttggaactacaactatggaccagctggaagagacaatggttttgatggattgaactc 42639234  T
Q  308 acctgaaacagtggccaatgatcctacagtgtccttcaagacagcattatggtattggatgaataatgtgcacggtgtcatcaaccaaggttttggtgca 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42639233 acctgaaacagtggccaatgatcctacagtgtccttcaagacagcattatggtattggatgaataacgtgcacggtgtcatcaaccaaggttttggtgca 42639134  T
Q  408 accattagagccattaatggtcgacttgaatgtgatggt 446  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42639133 accattagagccattaatggtcgacttgaatgtgatggt 42639095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 128 - 442
Target Start/End: Complemental strand, 42634336 - 42634019
Alignment:
Q  128 tgcagatttttgctatactgaagagattgatggtccatcaaaggactactgtgatgaaggcaacacagagtggccatgtgcccctaacaaaggttactat 227  Q
    |||||||||||||||||  |||||||  |||||| |||||||||||||||| |||||| ||||||||||||  || ||||||||||||||||| ||||||    
T  42634336 tgcagatttttgctatatagaagagaaggatggtgcatcaaaggactactgcgatgaaagcaacacagagtacccgtgtgcccctaacaaaggatactat 42634237  T
Q  228 ggtcgtggaccgattcaacttccttggaactacaactatggaccagctggaagagacaatggttttgatggattgaactcacctgaaacagtggccaatg 327  Q
    || ||||||||||||||| |  |||||||||  || || |||||||||||||  |||| ||||||||||| ||||||||| |||||||||||||||||||    
T  42634236 ggccgtggaccgattcaattatcttggaactttaattacggaccagctggaaaggacagtggttttgatgaattgaactctcctgaaacagtggccaatg 42634137  T
Q  328 atcctacagtgtccttcaagacagcattatggtattggatgaataatgtgcacggtgtcatcaac---caaggttttggtgcaaccattagagccattaa 424  Q
    |||||  ||||||||||||||||||||||||||||||||||||| ||||||||  |||||| |||   ||||| |||||||||||  |||||||||||||    
T  42634136 atcctttagtgtccttcaagacagcattatggtattggatgaatcatgtgcacaatgtcatgaaccaacaaggctttggtgcaacggttagagccattaa 42634037  T
Q  425 tggtcgacttgaatgtga 442  Q
    ||||||||||||||||||    
T  42634036 tggtcgacttgaatgtga 42634019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 91 - 245
Target Start/End: Complemental strand, 42628806 - 42628651
Alignment:
Q  91 tgtttatgaacacacataacatgtgatattaatgttg-tgcagatttttgctatactgaagagattgatggtccatcaaaggactactgtgatgaaggca 189  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||| |||    
T  42628806 tgtttatgaacacacataacatgtgaaattaatgttgatgcagatttctgctatactgaagagattgatggtgcatcataagactactgtgatgaaagca 42628707  T
Q  190 acacagagtggccatgtgcccctaacaaaggttactatggtcgtggaccgattcaa 245  Q
    |  ||||||   ||||||||||||||||||| | ||||||| ||||||||||||||    
T  42628706 atgcagagtacacatgtgcccctaacaaagggttctatggttgtggaccgattcaa 42628651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 446
Target Start/End: Complemental strand, 42628551 - 42628496
Alignment:
Q  391 accaaggttttggtgcaaccattagagccattaatggtcgacttgaatgtgatggt 446  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42628551 accaaggctttggtgcaaccactagagccattaatggtcgacttgaatgtgatggt 42628496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 2257047 - 2256964
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||||||||||||||||||||||||| ||| ||| ||||| |||||||||| || ||| |||||||||||| |||||| ||||    
T  2257047 tttttgtggtggccggggttcgaaccccagaccttgcatatattatgcattgtccataccaactgagttaagctcacgaggact 2256964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 42628638 - 42628588
Alignment:
Q  282 gacaatggttttgatggattgaactcacctgaaacagtggccaatgatcct 332  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  42628638 gacaatggttctgatggattgaactctcctgaaacagtggccaatgatcct 42628588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 7302136 - 7302204
Alignment:
Q  10 tggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| |||||||||||||||| ||| |||||||||||||||| |||||  ||||||| |||||||||||    
T  7302136 tggctggggttcgaacccagaccttgcatattttatgcattgtccctatcaactgagctaagttcacga 7302204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24592831 - 24592914
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    |||| ||||||||||||||| |||||| ||| ||| ||||| |||||||||| |||||| ||||||| ||||||||||| ||||    
T  24592831 ttttggtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagttcacgaggact 24592914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17736869 - 17736791
Alignment:
Q  1 tttttgtggtggccggggttcgaaccca-gatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||||||  | ||| ||||||| |||| ||||||    
T  17736869 tttttgtggtggccgaggttcgaatccatgatcttacatattttatgcattgttcataccaactgagctaagctcacga 17736791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29798502 - 29798580
Alignment:
Q  1 tttttgtggtggccggggttcgaaccca-gatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||||||||||  || |||| ||||||||||||||| || ||| |||||||||||| ||||||    
T  29798502 tttttgtggtggtcggggttcgaacccctgaccttaaatattttatgcattgtccataccaactgagttaagctcacga 29798580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29133469 - 29133520
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattg 51  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  29133469 tttttgtggtggtcggggttcgaaccctagatcttgcatattttatgcattg 29133520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29809402 - 29809331
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    ||||||||||||||||| ||||||||| | | ||| ||||| |||||||||| |||||| ||||||||||||    
T  29809402 tttttgtggtggccgggattcgaaccccgtacctttcatatattatgcattgtccctaccaactgagttaag 29809331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4927434 - 4927512
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||| ||||||||||| |||||| | | ||||||||| |||||| ||| |||||| ||||||| |||||||||||    
T  4927434 tttttgtgatggccggggtttgaaccccggaccttacatatattatgctttgtccctaccaactgagctaagttcacga 4927512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12599850 - 12599932
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||||||| ||||||||||| |||||| ||| ||||| ||||| |||| || ||| |||||||||||| | ||||||||    
T  12599850 tttttgtggtggtcggggttcgaaccccagaccttgcatatattatgtattgtccatactaactgagttaagcttacgaagac 12599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 27412821 - 27412899
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||| ||||  |||| ||||||||| |||||||||| | |||| |||||||||||| ||||||    
T  27412821 tttttgtggtggtcggggtttgaacaacagaccttacatatattatgcattgtctctaccaactgagttaagctcacga 27412899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31815872 - 31815950
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||| |||||| | | ||| ||||| |||||||||| |||||| |||||||||||| ||||||    
T  31815872 tttttgtggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagttaagctcacga 31815950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41859928 - 41859858
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    ||||| |||||||||||||| |||||| ||| ||| |||||||||||||||| || ||| |||||||||||    
T  41859928 tttttatggtggccggggtttgaaccccagaccttgcatattttatgcattgtccataccaactgagttaa 41859858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31397774 - 31397850
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||| ||||||||||||||||||| | | || |||||||||||||||||||| |||||| || |||| |||| ||||    
T  31397774 ttttggtggtggccggggttcgaatctcggaccttacatattttatgcattgtccctaccaattgagctaagctcac 31397850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30762480 - 30762531
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattg 51  Q
    ||||||||||||||| ||||||||||| | ||||| ||||||||||||||||    
T  30762480 tttttgtggtggccgaggttcgaaccctaaatcttgcatattttatgcattg 30762531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17778977 - 17779047
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    |||||||||||||||| |||||||| ||| | ||| || ||||||||||||| | |||| |||||||||||    
T  17778977 tttttgtggtggccggagttcgaactccaaaccttgcaaattttatgcattgtctctaccaactgagttaa 17779047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26999186 - 26999108
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||| ||| ||||| |||| ||| ||||| |||||||||| | |||| ||||||  |||||||||||    
T  26999186 tttttgtggtggccggagtttgaaccgcagaccttgcatatattatgcattgtctctaccaactgaactaagttcacga 26999108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17413318 - 17413387
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    |||||||||||| |||| || |||| | ||||||||||||||||||||||   || || |||||||||||    
T  17413318 tttttgtggtggtcgggatttgaacactgatcttacatattttatgcattattccaaccaactgagttaa 17413387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24393321 - 24393244
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    ||||||||||| |||||||||||||| |||| ||| ||||| |||||||||| || ||  ||||||| |||| |||||    
T  24393321 tttttgtggtgtccggggttcgaacctcagaccttgcatatattatgcattgtccttaacaactgagctaagctcacg 24393244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37265154 - 37265231
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||| ||||||||||| ||||||||  |||| ||||||||||||||| |||| || ||  |||||| |||||||||||    
T  37265154 ttttggtggtggccggagttcgaacgtcagaccttacatattttatgtattgtccttatcaactgaattaagttcacg 37265231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4238835 - 4238759
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||| ||| |||||||||| | | ||||||||| |||||||||| || ||| ||||||| |||| ||||    
T  4238835 tttttgtggtggtcggagttcgaaccccgaaccttacatatattatgcattgtccatactaactgagctaagctcac 4238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11175861 - 11175797
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactg 64  Q
    |||||||||||||||| ||| ||| |||||||||| ||||| |||||||||| || ||| |||||    
T  11175861 tttttgtggtggccggagtttgaaccccagatcttgcatatattatgcattgtccataccaactg 11175797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18324879 - 18324955
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||  | ||||||||| || ||||||| ||||| |||||||||| || ||| |||||||||||| ||||    
T  18324879 tttttgtggtgttcagggttcgaatcctagatcttgcatatattatgcattgtccttaccaactgagttaagctcac 18324955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27152429 - 27152353
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||| |||||| || |||||||||||| ||| ||| ||||| |||||||||  |||||| |||||||||||| ||||    
T  27152429 ttttggtggtgtcctgggttcgaaccccagaccttgcatatattatgcattatccctaccaactgagttaagctcac 27152353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 31156864 - 31156816
Alignment:
Q  25 cccagatcttacatattttatgcattgaccctacaaactgagttaagtt 73  Q
    |||||||||||||||| |||||||||  |||||| ||||||| ||||||    
T  31156864 cccagatcttacatatattatgcattatccctaccaactgagctaagtt 31156816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41748741 - 41748809
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagtt 68  Q
    ||||| |||||| ||||||| ||| ||| ||||||||||||||||||||||| || ||| | |||||||    
T  41748741 tttttttggtggtcggggtttgaatcccggatcttacatattttatgcattgtccataccagctgagtt 41748809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2655012 - 2655094
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    ||||||| |||||||||||| |||||| | |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  2655012 tttttgtagtggccggggtttgaaccccggatcttacatattttatgcattgtcccaacaaactgagttaagctcacgaagac 2655094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2726402 - 2726485
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||||||||| ||||||||||||||| | | ||| ||||| |||||||||| || ||| |||||||||||||| |||| ||||    
T  2726402 tttttgtggtgaccggggttcgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagtttacgaggact 2726485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11456361 - 11456424
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactg 64  Q
    |||||||||||||||||||| |||||| || ||||||||| |||||||||| || ||| |||||    
T  11456361 tttttgtggtggccggggtttgaaccccgaccttacatatattatgcattgtccataccaactg 11456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 10497169 - 10497214
Alignment:
Q  32 cttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||    
T  10497169 cttacatatattatgcattgtccttacaaactgagttaagttcacg 10497214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 14679199 - 14679119
Alignment:
Q  3 tttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    ||||||||||||||| |||||| |||| | ||| ||||| |||||||||| || ||| ||| |||||||||||||| ||||    
T  14679199 tttgtggtggccgggattcgaaacccaaaccttgcatatattatgcattgtccttaccaaccgagttaagttcacggagac 14679119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12582214 - 12582265
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattg 51  Q
    |||||||||||||||||||| |||| ||||| ||| ||||||||||||||||    
T  12582214 tttttgtggtggccggggtttgaactccagaccttgcatattttatgcattg 12582265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14610056 - 14609981
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||| ||||||||||||||| |||||| || ||||||||| ||||  |||| |||||  ||||||| |||||||||    
T  14610056 ttttggtggtggccggggtttgaacccggaccttacatatattatagattgtccctatcaactgagctaagttcac 14609981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34828383 - 34828316
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatatt-ttatgcattgaccctacaaactgag 66  Q
    ||||| |||||||||||||||||||| |||| |||||||||| |||||||||| || ||| |||||||    
T  34828383 tttttatggtggccggggttcgaacctcagaccttacatattattatgcattgtccataccaactgag 34828316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3373366 - 3373448
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||||| || ||| |||||| |||| ||||| ||||| |||||||||| || ||  ||||||||||| |||||||||||    
T  3373366 tttttgtggtagctgggattcgaatcccaaatcttgcatatattatgcattgtccatatcaactgagttaaattcacgaagac 3373448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4494857 - 4494934
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||||| |||||| |||||| ||  |||||||||||||||| || ||| ||||||| |||| ||||||    
T  4494857 tttttgtggtggccggg-ttcgaatcccagacctcgcatattttatgcattgtccataccaactgagctaagctcacga 4494934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 6610138 - 6610076
Alignment:
Q  16 gggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||||| ||||||| ||||| |||||||||| || ||  ||||||||||||||||||    
T  6610138 gggttcgaaccctagatcttgcatatattatgcattgcccttatcaactgagttaagttcacg 6610076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 7885581 - 7885539
Alignment:
Q  36 catattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||    
T  7885581 catattttatgcattgaccataccaactgagttaagctcacga 7885539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 15364974 - 15365040
Alignment:
Q  2 ttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagtt 68  Q
    ||||||||||| ||||||| ||||||| | ||| ||||| |||||||||| || ||| |||||||||    
T  15364974 ttttgtggtggtcggggtttgaacccaaaacttgcatatattatgcattgcccatactaactgagtt 15365040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17935805 - 17935727
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| |||| || |||||| ||| ||| |||||||||||||||| ||  || ||||||| |||||||||||    
T  17935805 tttttgtggtggtcgggatttgaaccctagaccttgcatattttatgcattgtccaaaccaactgagctaagttcacga 17935727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34701223 - 34701145
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||| ||| ||||| |||| ||| ||||| ||||||||||  ||||| ||||||  |||||||||||    
T  34701223 tttttgtggtggccggagtttgaacctcagaccttgcatatattatgcattgttcctaccaactgaactaagttcacga 34701145  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3808103 - 3808180
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    ||||||||||||| |||||| ||| | | || ||| ||||| |||||||||| || ||| ||||||||||||||||||    
T  3808103 tttttgtggtggctggggtttgaatctcggaccttgcatatattatgcattgtccttactaactgagttaagttcacg 3808180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26320549 - 26320626
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| |||||| |||| ||| |||||| || ||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  26320549 ttttagtggtgaccggagtttgaacccggaccttgcatattttatgcattgtccataccaactgagctaagctcacga 26320626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14296942 - 14297018
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||||||||||| ||| ||| || ||||||||||||||| |||| || ||| |||| || |||| ||||    
T  14296942 tttttgtggtggccggggtttgaaccccggaccttacatattttatgtattgtccataccaactcagctaagctcac 14297018  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27080789 - 27080861
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctac-aaactgagttaag 71  Q
    |||||||||||| ||||||| |||  ||||| ||| ||||| |||||||||| |||||| |||||||||||||    
T  27080789 tttttgtggtggtcggggtttgaattccagagcttgcatatattatgcattgtccctactaaactgagttaag 27080861  T

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Target: scaffold0062 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 7543 - 7472
Alignment:
Q  7 tggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||| |||||||||||||||||||||||||||||||||  | ||| || ||||||||| ||||||    
T  7543 tggtggccgggattcgaacccagatcttacatattttatgcattgttcataccaattgagttaagctcacga 7472  T

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Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15602162 - 15602246
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagat-cttacatattttatgcattgaccctacaaactgagttaagttcacgaagacta 84  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||||| || ||| ||||||| || | |||||| |||||    
T  15602162 tttttgtggtggccggggctcgaacccagatccttacatatattatgcattgtccataccaactgagctatgctcacgaggacta 15602246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 26498115 - 26498048
Alignment:
Q  22 gaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagactagggtc 89  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||| |||| |||||| ||||| ||||    
T  26498115 gaacccagaccttacatattttatgcattgtccgtaccaactgagctaagctcacgatgactatggtc 26498048  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2613798 - 2613720
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatc-ttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||| |||| |||||||||||||| || | ||||||||||||||||||| || ||| ||||||| |||| ||||||    
T  2613798 tttttgttgtggtcggggttcgaaccccgaaccttacatattttatgcattgtccataccaactgagctaagctcacga 2613720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 28031333 - 28031259
Alignment:
Q  9 gtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||||||||||||||||||||  ||| ||||||||||||||  | |||| ||||||| ||||| ||||| ||||    
T  28031333 gtggccggggttcgaacccagactttatatattttatgcattatctctaccaactgagataagtccacgaggact 28031259  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34766936 - 34766854
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    ||||||||||||||| |||||||| |||||| ||| ||| | |||| ||||| || ||| |||||||||||| ||||||||||    
T  34766936 tttttgtggtggccgaggttcgaaccccagaccttgcatgtattatacattgtccataccaactgagttaagctcacgaagac 34766854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48646710 - 48646792
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatatt-ttatgcattgaccctacaaactgagttaagttcacgaaga 81  Q
    |||||||||||||||| ||| |||||| | | ||| |||||| |||||||||| || |||||||||||||||| |||||||||    
T  48646710 tttttgtggtggccggagtttgaaccccggaccttgcatattattatgcattgtccatacaaactgagttaagctcacgaaga 48646792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14521020 - 14520943
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||||||||||||||||| |||| |  || |||||||||||||||| || ||| ||||||| |||| |||||    
T  14521020 tttttgtggtggccggggttcgaaccccaaactttgcatattttatgcattgtccataccaactgagctaagctcacg 14520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8736511 - 8736427
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagacta 84  Q
    |||||||||||||||||||| ||| ||| || ||| |||||||||||||||| || ||| |||  ||||||| |||||| |||||    
T  8736511 tttttgtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaaccaagttaagctcacgacgacta 8736427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9265821 - 9265897
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||||||||||| ||| |||||| ||| ||| | |||| ||||| || ||| |||||||||||||||||    
T  9265821 tttttgtggtggccggggtttgaatcccagaccttgcatgtattatacattgtccataccaactgagttaagttcac 9265897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11410703 - 11410627
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||| |||| ||||||||| ||| ||||||||||||||| ||||  | ||| |||||||||||| ||||    
T  11410703 tttttgtggtggtcgggattcgaaccccagaccttacatattttatgtattgttcataccaactgagttaagctcac 11410627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33153865 - 33153941
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||  ||||||| ||||| | || ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  33153865 tttttgtggtgttcggggtttgaacctcggaccttacatatattatgcattgtccctaccaactgagttaagctcac 33153941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 43840324 - 43840380
Alignment:
Q  14 cggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    |||||||||||| | ||||||||||||||||||||||| || ||  |||||||||||    
T  43840324 cggggttcgaactcggatcttacatattttatgcattgtccatatcaactgagttaa 43840380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24529761 - 24529690
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||| |||||||||||| ||||||||| | | ||||||||||||||||| || || ||| ||||||||||||    
T  24529761 ttttggtggtggccgggattcgaaccccggaccttacatattttatgcaatgtccatactaactgagttaag 24529690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40227905 - 40227834
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||||||||||| ||||||||||| |||||| |||  ||||||||||||||| || ||| ||||||| ||||    
T  40227905 tttttgtggtggtcggggttcgaaccccagaccttgtatattttatgcattgtccataccaactgagctaag 40227834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41973331 - 41973260
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||||||||||||||||||||||| ||| || ||| ||||| |||||||||| |||||| || | |||||||    
T  41973331 tttttgtggtggccggggttcgaaccccggaccttgcatatattatgcattgtccctaccaattaagttaag 41973260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 2889947 - 2889993
Alignment:
Q  36 catattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    ||||| |||||||||| |||||| |||||||||||| ||||||||||    
T  2889947 catatattatgcattgtccctaccaactgagttaagctcacgaagac 2889993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10356168 - 10356246
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||| ||||||| ||| || | | ||||| |||||||||| || ||| |||||||||||| ||||||    
T  10356168 tttttgtggtggccggagttcgaaccccggaccgtgcatatattatgcattgtccataccaactgagttaagctcacga 10356246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13096971 - 13096921
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattg 51  Q
    |||||||||||| |||||||||||||| || |||  |||||||||||||||    
T  13096971 tttttgtggtggtcggggttcgaaccccgaccttgtatattttatgcattg 13096921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16033435 - 16033513
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||| ||| ||| |||||| ||| ||||| |||||||||| |||||  |||||||| ||| ||||||    
T  16033435 tttttgtggtggccggagtttgaaccccagaccttgcatatattatgcattgtccctatcaactgagtcaagctcacga 16033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19533164 - 19533214
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattg 51  Q
    ||||||||||||||||  |||||||||| ||||| ||||| ||||||||||    
T  19533164 tttttgtggtggccggaattcgaacccaaatcttgcatatattatgcattg 19533214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 24752637 - 24752711
Alignment:
Q  6 gtggtggccggggttcgaa-cccagatcttacatatt-ttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||||||| |||||| ||| |||||| |||||||||| || ||| ||||||| |||| ||||||    
T  24752637 gtggtggccggggttcgaaccccagaccttgcatattattatgcattgtccataccaactgagctaagctcacga 24752711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29042613 - 29042535
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| |||| || |||||| | ||||||||||| |||||||||  |||||| || ||||||||||| ||||    
T  29042613 tttttgtggtggtcgggatttgaaccccggatcttacatatattatgcattatccctaccaattgagttaagtttacga 29042535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 30678830 - 30678876
Alignment:
Q  32 cttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||| |||||||||| |||||| |||||||||||| ||||||    
T  30678830 cttacatatattatgcattgtccctaccaactgagttaagctcacga 30678876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41763140 - 41763218
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||| |||||||||||| |||||| | | ||| |||||||||||||||  |||||| ||||||| |||| ||||||    
T  41763140 tttttgttgtggccggggtttgaaccccggaccttgcatattttatgcattatccctaccaactgagctaagctcacga 41763218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42045357 - 42045435
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||||||||||||| |||| ||||| ||| ||||| |||||||||| || ||| ||||||| |||| ||||||    
T  42045357 ttttggtggtggccggggtttgaactccagaccttgcatatattatgcattgtccataccaactgagctaagctcacga 42045435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45773527 - 45773609
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    ||||| |||| ||||||||| ||||| ||||||||  ||||||||||||||| || ||| |||||||||| | || |||||||    
T  45773527 tttttttggtagccggggtttgaaccacagatcttgtatattttatgcattgtccgtaccaactgagttatgctctcgaagac 45773609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6219848 - 6219925
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| | || || |||||| || ||||||||| ||||| |||| |||||| ||| |||||||| ||||||    
T  6219848 tttttgtggtggtcaggatttgaacccggaccttacatatattatgtattgtccctaccaaccgagttaagctcacga 6219925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 12852212 - 12852257
Alignment:
Q  25 cccagatcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    |||||||||||||||| |||||||||  |||||| |||||||||||    
T  12852212 cccagatcttacatatattatgcattatccctaccaactgagttaa 12852257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42888651 - 42888574
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||| |||||||| ||||||||||||| | | ||| |||||||||||||||| || ||| ||||||| |||| |||||    
T  42888651 ttttggtggtggcgggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacg 42888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49130213 - 49130290
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||||| |||||||||||| |  ||||| |||||||||||||||  || ||| || ||||||||| ||||||    
T  49130213 ttttggtggtggtcggggttcgaactcgaatcttgcatattttatgcattagccttaccaattgagttaagctcacga 49130290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 52267815 - 52267762
Alignment:
Q  25 cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||| ||| |||||||||||||||| || ||| |||||||||||| ||||||    
T  52267815 cccagaccttgcatattttatgcattgtccttaccaactgagttaagctcacga 52267762  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 5280705 - 5280629
Alignment:
Q  3 tttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||| ||||||||||| |||||| ||| ||||| ||||||| || | || | |||||||||||| ||||||    
T  5280705 tttgtggtggtcggggttcgaaccccagaccttgcatatattatgcactgtctcttccaactgagttaagctcacga 5280629  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3830144 - 3830061
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||||||||||| |||||| |||||| | | ||| ||||| |||||||||| |||||||||||||| ||||||||||| ||||    
T  3830144 tttttgtggtggctggggtttgaaccctggaccttgcatatattatgcattgtccctacaaactgagctaagttcacgaggact 3830061  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18505643 - 18505720
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||| |||| | ||||||| |||||| |||||| |||||||||||||||| |||||| ||||||| |||| ||||||    
T  18505643 tttttttggtagtcggggtttgaacccggatcttgcatattttatgcattgtccctaccaactgagctaagctcacga 18505720  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 580911 - 580994
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    |||||||||||| |||||||||||| || |||||| |||||||||||||||| || ||| ||| ||| |||| |||||| ||||    
T  580911 tttttgtggtggtcggggttcgaacgccggatcttgcatattttatgcattgtccataccaaccgagctaagctcacgaggact 580994  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21993257 - 21993174
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagacta 84  Q
    |||||||| ||||||||||| ||| || |  ||| |||||||||||||||| || ||| |||||||||||| |||||| |||||    
T  21993257 tttttgtgatggccggggtttgaaacccggccttgcatattttatgcattgtccataccaactgagttaagctcacgaggacta 21993174  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8883627 - 8883551
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||||| ||||||||| || ||| || || |||||||||| || ||| |||||||||||| ||||||    
T  8883627 tttttgtggtggccgggattcgaaccc-gaccttgcacatattatgcattgtccataccaactgagttaagctcacga 8883551  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36428223 - 36428146
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||| ||| |||||||||||||| || ||| |||||||||| ||||| || ||| |||||||||||| ||||||    
T  36428223 ttttggtgttggtcggggttcgaaccccgaccttgcatattttatacattgtccataccaactgagttaagctcacga 36428146  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 24839558 - 24839486
Alignment:
Q  7 tggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||| |||| |||||||| ||| |||||||||||||||||||| |  ||| |||||||||||| ||||||    
T  24839558 tggtggctggggatcgaaccccagaccttacatattttatgcattgtctataccaactgagttaagctcacga 24839486  T

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Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 24225973 - 24226044
Alignment:
Q  8 ggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||| || |||||||||| | || |||||||||||||||||||| || ||| ||||||| |||||||||||    
T  24225973 ggtggtcgaggttcgaacctcggaccttacatattttatgcattgtccatacgaactgagctaagttcacga 24226044  T

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Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30753802 - 30753751
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattg 51  Q
    |||||||||||||||| ||| |||| ||||| ||||||||||||||||||||    
T  30753802 tttttgtggtggccggagtttgaactccagaccttacatattttatgcattg 30753751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40187621 - 40187692
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||| ||||||  ||||||| ||||| |||| ||||||||| |||||||||| |||||| ||||||||||||    
T  40187621 ttttggtggtgttcggggtttgaaccgcagaccttacatatattatgcattgtccctaccaactgagttaag 40187692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7388024 - 7388102
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatc-ttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||| ||| || || | |||||||| |||||||||| ||| || |||||||||||| ||||||    
T  7388024 tttttgtggtggtcggggtttgaatcccgaaccttacatatattatgcattgtcccaaccaactgagttaagctcacga 7388102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14046596 - 14046674
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||||||| |||||| | ||||| ||||| |||||||||  || ||| ||||||| |||| ||||||    
T  14046596 tttttgtggtggccggggtttgaaccccgtatcttgcatatattatgcattacccataccaactgagataagctcacga 14046674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14356626 - 14356704
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||||||| |||||| | ||||| ||||| |||||||||  || ||| ||||||| |||| ||||||    
T  14356626 tttttgtggtggccggggtttgaaccccgtatcttgcatatattatgcattacccataccaactgagataagctcacga 14356704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19416590 - 19416512
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||||||||||||| |||||| | | ||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  19416590 ttttggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacga 19416512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22777345 - 22777395
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattg 51  Q
    ||||||||||||||||| ||||||||| || ||| ||||| ||||||||||    
T  22777345 tttttgtggtggccgggattcgaaccccgaccttgcatatattatgcattg 22777395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 44454552 - 44454510
Alignment:
Q  36 catattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||| |||||| |||||||||||| ||||||    
T  44454552 catattttatgcattgtccctaccaactgagttaagctcacga 44454510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 2916166 - 2916101
Alignment:
Q  13 ccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||||| |||||| ||| ||||| |||||||||| || ||| |||||||||||| |||||    
T  2916166 ccggggttcgaatcccagaccttgcatatattatgcattgtccgtaccaactgagttaaggtcacg 2916101  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27263417 - 27263340
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatc-ttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    ||||| ||||||| ||||||||||| | || | || ||||| |||||||||| || ||| ||||||||||||||||||    
T  27263417 tttttatggtggctggggttcgaactccgaaccttgcatatattatgcattgtccataccaactgagttaagttcacg 27263340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27772218 - 27772295
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||| |||||| || ||||||||| || ||||||| ||||| |||||||||| || ||| |||||||||||| |||||    
T  27772218 ttttggtggtgtccagggttcgaatcctagatcttgcatatattatgcattgcccttacgaactgagttaagctcacg 27772295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34722005 - 34722082
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatatt-ttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||||| ||||||||||| | || |||||||||| ||||||||||  | ||| |||||||||||| ||||    
T  34722005 tttttgtggtggcctgggttcgaacctcggaccttacatattattatgcattgttcataccaactgagttaagctcac 34722082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47342752 - 47342675
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||| ||||| ||||||||  | |||| | ||| |||||||||||||||| || ||| ||||||| |||||||||||    
T  47342752 tttttttggtgcccggggttgaaccccaaaccttgcatattttatgcattgtccataccaactgagctaagttcacga 47342675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34343187 - 34343119
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagtta 69  Q
    ||||| ||||||||||||||   |||  || |||||||||||||||||||| || ||| ||||||||||    
T  34343187 tttttatggtggccggggtttagaccacgaccttacatattttatgcattgtccttaccaactgagtta 34343119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 11720964 - 11720885
Alignment:
Q  6 gtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagactag 85  Q
    ||||||||||||||| |||||| || ||| ||||| |||||||||| |||||| |||||||||||| |||| | ||||||    
T  11720964 gtggtggccggggtttgaaccccgaccttgcatatattatgcattgtccctaccaactgagttaagctcacaaggactag 11720885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17046409 - 17046332
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| |||||||||||| ||||||| | |||||| ||||| |||||||||| || ||| |||||||||||| ||||||    
T  17046409 ttttggtggtggccgggattcgaactcggatcttgcatatattatgcattgtccataccaactgagttaagctcacga 17046332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 22499011 - 22498942
Alignment:
Q  7 tggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    ||||| |||||||||||||||||| ||| ||||| |||||||||| || ||| |||||||||||| ||||    
T  22499011 tggtgtccggggttcgaacccagaccttgcatatattatgcattgtccttaccaactgagttaagctcac 22498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6489083 - 6489005
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||||||||||||| ||| |||||| ||| ||||| |||||||||| |||||| ||||||| |||| ||||||    
T  6489083 ttttggtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagctcacga 6489005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11637557 - 11637635
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatc-ttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||| |||||| |||||||||||||| || | || |||||||||||||||| || ||| |||||||||||| ||||||    
T  11637557 tttttatggtggtcggggttcgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacga 11637635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25509387 - 25509309
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||| ||||||||| |||||||||| | || ||| |||||| ||||||||| |||||| |||||||||||| ||||||    
T  25509387 tttttttggtggccgaggttcgaacctcggaccttgcatattatatgcattgtccctactaactgagttaagctcacga 25509309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28207208 - 28207130
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||||| |||||||| | || ||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  28207208 tttttgtggtggccgggattcgaacctcggaccttgcatattttatgcattgtccataccaactgagctaagctcacga 28207130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35413032 - 35412982
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattg 51  Q
    ||||||||||||||||||||||||||| || ||| ||||| ||||||||||    
T  35413032 tttttgtggtggccggggttcgaacccggaccttgcatatattatgcattg 35412982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 38043541 - 38043491
Alignment:
Q  32 cttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||||||||||||||  || |||||||||| ||||||||||||||||    
T  38043541 cttacatattttatgcattatccatacaaactgaattaagttcacgaagac 38043491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 3389213 - 3389156
Alignment:
Q  25 cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||||| ||||| |||||||||| || ||| |||||||||| ||||||||||||    
T  3389213 cccagatcttgcatatattatgcattgtccataccaactgagttatgttcacgaagac 3389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29178521 - 29178445
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| |||| ||||||| |||| |||  ||||||||||||||| || ||| |||||||||||| ||||||    
T  29178521 tttttgtggtggtcggg-ttcgaacacagaccttgtatattttatgcattgtccataccaactgagttaagctcacga 29178445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 8682411 - 8682463
Alignment:
Q  32 cttacatattttatgcattgaccctacaaactgagttaagttcacgaagacta 84  Q
    ||||||||| |||||||||| |||||| |||||||||||| |||||| |||||    
T  8682411 cttacatatattatgcattgtccctactaactgagttaaggtcacgacgacta 8682463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14124377 - 14124293
Alignment:
Q  1 tttttgtggtggccggggttcgaacccaga-tcttacatattttatgcattgaccctacaaactgagttaagttcacgaagacta 84  Q
    |||| |||||||||||| ||||| ||| || ||||  |||| |||||||||| || ||| |||| ||||||||||||||||||||    
T  14124377 ttttggtggtggccgggattcgatccccgaatcttgtatatattatgcattgtccttaccaactaagttaagttcacgaagacta 14124293  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 781939 - 781868
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||||||||||| | |||||||||||| ||| ||| |||||||||| ||||| |||||  ||||||||||||    
T  781939 tttttgtggtggtcagggttcgaaccccagaccttgcatattttatacattgtccctatcaactgagttaag 781868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26409329 - 26409246
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||| |||||| ||||||||||| ||| || ||||||||| |||||||||| || ||| ||||||| |||| ||||| |||||    
T  26409329 tttttttggtgggcggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagctaagctcacggagact 26409246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 1257140 - 1257190
Alignment:
Q  2 ttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattg 51  Q
    |||||||||||  ||||||||||||| ||| ||||||||||||||||||||    
T  1257140 ttttgtggtggttggggttcgaaccccagaccttacatattttatgcattg 1257190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 1512899 - 1512853
Alignment:
Q  32 cttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||| |||||||||| |||||| |||||||||||| ||||||    
T  1512899 cttacatatattatgcattgtccctactaactgagttaagctcacga 1512853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3156610 - 3156540
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    |||| ||||||| |||| ||||||||| | |||||||||||||||||||||  || ||| |||||||||||    
T  3156610 ttttggtggtggtcgggattcgaaccccaaatcttacatattttatgcattatccataccaactgagttaa 3156540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9595627 - 9595577
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattg 51  Q
    ||||| ||||| |||||||| |||||| || ||||||||||||||||||||    
T  9595627 tttttatggtgaccggggtttgaaccccgaccttacatattttatgcattg 9595577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10032259 - 10032337
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||| |||| ||||| | | ||| ||||| |||||||||| || ||| |||||||||||| ||||||    
T  10032259 tttttgtggtggccggagttcaaaccccaaaccttgcatatgttatgcattgtccataccaactgagttaagctcacga 10032337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10227856 - 10227778
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||| ||| |||||||| | | ||| ||||||| |||||||| || ||| |||||||||||| ||||||    
T  10227856 tttttgtggtggccagggatcgaaccccggaccttgcatatttcatgcattgtccttacgaactgagttaagctcacga 10227778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18391676 - 18391594
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||||||| || |||||||||| | || ||| |||||||||||||||| || ||| ||||||| |||| ||| ||||||    
T  18391676 tttttgtggtggtcgaggttcgaacctcggaccttgcatattttatgcattgtccttaccaactgagctaagctcaagaagac 18391594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22665188 - 22665266
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||||||||||||| |||| || |||||| |||||||||| ||||| || ||| ||||||| |||| ||||||    
T  22665188 ttttggtggtggccggggtttgaactccggatcttgcatattttatacattgtccatactaactgagctaagctcacga 22665266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26655540 - 26655474
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgag 66  Q
    |||| ||||||||||||||||||| ||| || ||||||||| |||||||||| || ||| |||||||    
T  26655540 ttttggtggtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgag 26655474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26927125 - 26927059
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgag 66  Q
    |||| ||||||||||||||||||| ||| || ||||||||| |||||||||| || ||| |||||||    
T  26927125 ttttggtggtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgag 26927059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37932406 - 37932328
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||| ||||||||| ||| || ||| ||||| |||||||||| || ||| ||||||| |||| ||||||    
T  37932406 tttttgtggtggccagggttcgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcacga 37932328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 39914970 - 39914900
Alignment:
Q  7 tggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||| |||||||||||||| || ||| ||||| |||||||||| || ||| || ||||||||| |||||    
T  39914970 tggtggtcggggttcgaacccggaccttgcatatattatgcattgtccttaccaattgagttaagctcacg 39914900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11647273 - 11647196
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||||| | || ||||||||| | | ||| ||||| |||||||||| || ||| ||||||||||||||||||    
T  11647273 tttttgtggtggtcaggattcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagttaagttcacg 11647196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 18995683 - 18995642
Alignment:
Q  37 atattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  18995683 atatattatgcattgtccatacaaactgagttaagttcacga 18995642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34702566 - 34702489
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||||||| || ||||||||| | | ||| ||||| |||||||||| || ||| |||||||||||| |||||    
T  34702566 tttttgtggtggccaggattcgaaccccggacctttcatatattatgcattgtccttaccaactgagttaagctcacg 34702489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19647493 - 19647577
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagacta 84  Q
    ||||| |||||| |||| || |||||| ||| ||||||||| |||| ||||| |||||| | | |||||||||||||||| ||||    
T  19647493 tttttatggtggtcgggatttgaaccccagaccttacatatattatacattgtccctaccatccgagttaagttcacgaatacta 19647577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21376748 - 21376708
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatat 40  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  21376748 tttttgtggtggtcggggttcgaacctcagatcttacatat 21376708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42515884 - 42515805
Alignment:
Q  1 tttttgtggtggccggggttcgaa--cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||| |||||||||||| |||  ||| || ||||||||| |||||||||| || ||| |||||| ||||| ||||||    
T  42515884 tttttgtagtggccggggtttgaatccccggaccttacatatattatgcattgtccataccaactgaattaagctcacga 42515805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1324 - 1242
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||||||||||| ||| |||| ||||| ||||||||| |||||||||| || ||  ||||||| |||||||||||||||    
T  1324 tttttgtggtggccggagtttgaactccagaccttacatatattatgcattgtccatatcaactgagctaagttcacgaagac 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 53365 - 53443
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||| |||||| ||| ||| |||||||||||||||| |||| | |||||||||||| ||||||    
T  53365 tttttgtggtggtcggggtttgaaccccagaccttgcatattttatgcattgtcccttccaactgagttaagctcacga 53443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6038260 - 6038342
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||||||||||| ||| |||| ||||| ||||||||| |||||||||| || ||  ||||||| |||||||||||||||    
T  6038260 tttttgtggtggccggagtttgaactccagaccttacatatattatgcattgtccatatcaactgagctaagttcacgaagac 6038342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44293651 - 44293567
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagacta 84  Q
    |||||||||||| | |||||||||||| ||||||||||||| |||||||||| |  ||| ||||||| |||| |||||| |||||    
T  44293651 tttttgtggtggtcagggttcgaaccccagatcttacatatattatgcattgtctataccaactgagctaagctcacgaggacta 44293567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 15188959 - 15188896
Alignment:
Q  17 ggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacgaa 79  Q
    ||||||||||| ||||||||||||| |||||||||| || ||| |||||||||||| |||||||    
T  15188959 ggttcgaaccccagatcttacatatattatgcattgtccatactaactgagttaagctcacgaa 15188896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37873053 - 37872975
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||| ||||||||||||||||||||  | | ||| ||||||||||||||||||| ||| ||||||| |||| ||||||    
T  37873053 tttttatggtggccggggttcgaaccacgtaccttgcatattttatgcattgaccataccaactgagctaagctcacga 37872975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1244690 - 1244767
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    ||||||||||| |||||||||||| |||||| |||  |||| |||||||||| || ||| ||||||| ||||||||||    
T  1244690 tttttgtggtgtccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgagctaagttcacg 1244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13286206 - 13286129
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||| ||||||||||||| |||||| |||||| ||||| |||||||||| |  ||| ||||||| |||| ||||||    
T  13286206 tttttgcggtggccggggtttgaacccggatcttgcatatattatgcattgtctataccaactgagctaagctcacga 13286129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32944825 - 32944894
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagtta 69  Q
    |||||||||||| ||||||| ||||| |||| ||| |||||||||||||||| || ||| ||||||||||    
T  32944825 tttttgtggtggtcggggtttgaacctcagaccttgcatattttatgcattgtccataccaactgagtta 32944894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4756955 - 4757006
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattg 51  Q
    |||||||||||| |||||||||||||| |||| || ||||||||||||||||    
T  4756955 tttttgtggtggtcggggttcgaacccaagatattgcatattttatgcattg 4757006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3650596 - 3650518
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||||||| |||||| | | ||||||||| |||||||||    |||| |||||||||||| ||||||    
T  3650596 tttttgtggtggccggggtttgaaccccgaaccttacatatattatgcattttttctaccaactgagttaagctcacga 3650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26886027 - 26886097
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    |||| ||||| ||| |||||||||||| | |||||||||||||||||||||| || ||| |||| ||||||    
T  26886027 ttttagtggtagccagggttcgaaccccggatcttacatattttatgcattgtccataccaactaagttaa 26886097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29376977 - 29376899
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||| |||| ||||| ||| ||||| ||| |||||| || ||| |||||||||||| ||||||    
T  29376977 tttttgtggtggtcggggtttgaactccagaccttgcatatattacgcattgtccataccaactgagttaagctcacga 29376899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4757835 - 4757758
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||| ||||  ||| |||| ||||||||| ||||| |||| | || | |||| ||||||||||||||    
T  4757835 tttttgtggtggccgaggttacaactcagaccttacatatattatggattgtctctgccaacttagttaagttcacga 4757758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 13272540 - 13272589
Alignment:
Q  33 ttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||| |||||||||| || ||  |||||||||||||||||||||||    
T  13272540 ttacatatattatgcattgtccatatcaactgagttaagttcacgaagac 13272589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 21557503 - 21557426
Alignment:
Q  7 tggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    |||||| |||| |||||||| | || ||||||||| |||||||||| || ||| |||||||||||| |||||| ||||    
T  21557503 tggtggtcgggattcgaacctcggaccttacatatattatgcattgtccatactaactgagttaagctcacgaggact 21557426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31685291 - 31685242
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcatt 50  Q
    ||||||||||||||||| |||||||||  | ||||||||| |||||||||    
T  31685291 tttttgtggtggccgggtttcgaaccccaaccttacatatattatgcatt 31685242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37570739 - 37570816
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||| ||||||  | ||||||||| ||||| |||| || ||| ||| ||| |||||||||||    
T  37570739 tttttgtggtggtcggggtttgaaccccaaccttacatatgttatgtattgtccataccaaccgagctaagttcacga 37570816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40679714 - 40679790
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    ||||||||||||||| |||| ||| ||| || ||| ||||||||||  ||||||| ||| ||||||| |||||||||    
T  40679714 tttttgtggtggccgaggtttgaaccccggaccttgcatattttatatattgaccataccaactgagctaagttcac 40679790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16431692 - 16431614
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||| |||||||||| |||||| ||| ||| |||||||||||||||| || ||| ||||||| |||||||||||    
T  16431692 tttttgtggaggccggggtttgaaccccagaccttgcatattttatgcattgtccataccaactgagctaagttcacga 16431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38375033 - 38374956
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||||||||||||| |||| ||||| ||| ||||| |||||||||| |||||| |||| ||||||| |||||    
T  38375033 tttttgtggtggccggggtttgaactccagaccttgcatatattatgcattgtccctaccaactaagttaagctcacg 38374956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8495063 - 8494985
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||||| || |||| | | ||||| ||||| |||||||||| |||||| ||||||| |||||||||||    
T  8495063 tttttgtggtggccgggatttgaactcgggatcttgcatatattatgcattgtccctaccaactgagctaagttcacga 8494985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 23619140 - 23619094
Alignment:
Q  37 atattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  23619140 atattttatgcattgtccctaccaactgaggtaagttcacgaagact 23619094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27655806 - 27655756
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattg 51  Q
    |||| ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  27655806 ttttagtggtggccggggttcgaacccagaccttgcatatattatgcattg 27655756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43034327 - 43034405
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||||||||||||| ||||| |||| ||| ||||| |||||||||| || ||| |||||||||||| ||||||    
T  43034327 ttttggtggtggccggggtttgaacctcagaccttgcatatattatgcattgtccataccaactgagttaagctcacga 43034405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 49949404 - 49949338
Alignment:
Q  6 gtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagt 72  Q
    |||||||||||| |||||||||||| ||| ||||| |||||||||| || ||| ||||||| |||||    
T  49949404 gtggtggccgggattcgaacccagaccttgcatatattatgcattgtccttaccaactgagctaagt 49949338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4963338 - 4963383
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatg 46  Q
    |||| |||||||||||||||||||||| || |||||||||||||||    
T  4963338 ttttggtggtggccggggttcgaaccccgaccttacatattttatg 4963383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7030879 - 7030956
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||| ||||||| |||||||| || || ||| |||||||||||||||| |  ||| |||||||||||| ||||||    
T  7030879 tttttgtagtggccgaggttcgaatccggaccttgcatattttatgcattgtctataccaactgagttaagctcacga 7030956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19908768 - 19908692
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||| ||||||||||||| | || ||| ||||| |||||||||| || ||| |||||||||||| ||||    
T  19908768 tttttgtggtggtcggggttcgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagctcac 19908692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21318238 - 21318309
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||| ||||||| ||||||| |||||| ||| ||| ||||| |||||||||| |||||| ||||||||||||    
T  21318238 ttttagtggtggtcggggtttgaaccctagaccttgcatatattatgcattgtccctaccaactgagttaag 21318309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5318906 - 5318828
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||||||| ||| || ||||||| ||||||| ||||  ||||| |||||  ||||||||||||    
T  5318906 tttttgtggtggtcggggttcgaagcccggaccttacattttttatgtattgttcctaccaactgtattaagttcacga 5318828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 10303504 - 10303574
Alignment:
Q  9 gtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||| ||||||||||| | ||||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  10303504 gtggccgaggttcgaaccccggatcttgcatattttatgcattgtccttaccaactgagctaagctcacga 10303574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 14197445 - 14197487
Alignment:
Q  29 gatcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||||||||||| |||||||||| |||||| ||||||||||||    
T  14197445 gatcttacatatattatgcattgtccctaccaactgagttaag 14197487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19588230 - 19588152
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||||||| ||||||  || ||| |||||||||||||||| || ||| || |||| |||| ||||||    
T  19588230 tttttgtggtggccggggtttgaaccctggaccttgcatattttatgcattgtccataccaattgagctaagctcacga 19588152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32180906 - 32180828
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||||||| ||||||  || |||||||||||||||| |  ||| ||||||| |||| ||||||    
T  32180906 tttttgtggtggtcggggttcgaaccccagactttgcatattttatgcattgtctataccaactgagctaagctcacga 32180828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35287492 - 35287570
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||||||| ||| ||| || ||| ||||||||||||||||  | ||| ||||||| |||| ||||||    
T  35287492 tttttgtggtggccggggttggaaccccggaccttgcatattttatgcattgttcataccaactgagctaagctcacga 35287570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 51458752 - 51458678
Alignment:
Q  2 ttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    ||||||||||||| || ||||||||| || ||| ||||||||||| |||| || ||| ||||||| |||| ||||    
T  51458752 ttttgtggtggccaggattcgaacccggaccttgcatattttatgtattgtccataccaactgagctaagctcac 51458678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2587686 - 2587735
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcatt 50  Q
    ||||||||||||| |||||| |||||| || ||||||||| |||||||||    
T  2587686 tttttgtggtggctggggtttgaacccggaccttacatatattatgcatt 2587735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17656779 - 17656844
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgag 66  Q
    ||||||||||||||||| ||||||||   | ||||||||| |||||||||| || ||| |||||||    
T  17656779 tttttgtggtggccgggattcgaacctgaaccttacatatattatgcattgtccataccaactgag 17656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25101375 - 25101444
Alignment:
Q  1 tttttgtggtggccggggttcgaacccaga-tcttacatattttatgcattgaccctacaaactgagtta 69  Q
    ||||||||||||||||||||| ||||| ||  ||| |||||||||||||||| || ||| || |||||||    
T  25101375 tttttgtggtggccggggttcaaaccccgacccttgcatattttatgcattgtccataccaattgagtta 25101444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46120017 - 46120066
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcatt 50  Q
    |||||||||||||||||||||||||||    ||| |||||||||||||||    
T  46120017 tttttgtggtggccggggttcgaaccccagccttgcatattttatgcatt 46120066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46133151 - 46133200
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcatt 50  Q
    |||||||||||||||||||||||||||    ||| |||||||||||||||    
T  46133151 tttttgtggtggccggggttcgaaccccagccttgcatattttatgcatt 46133200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 50937539 - 50937616
Alignment:
Q  6 gtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||||| |||| ||||||||| |||||||||||| |||||| |||  | ||| ||||||  |||| |||||||||||    
T  50937539 gtggtggtcgggattcgaaccctgatcttacatatattatgctttgttcttaccaactgaactaagctcacgaagact 50937616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3936703 - 3936627
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||||||||||||||||||||||| ||| || ||| ||||| ||||||||||  | ||| ||||||| |||| ||||    
T  3936703 tttttgtggtggccggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgagctaagctcac 3936627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19854641 - 19854565
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    ||||||||||| ||| |||||||| ||| |||||| ||||| |||||||||| || ||| ||||||| |||| ||||    
T  19854641 tttttgtggtgtccgaggttcgaaccccggatcttgcatatattatgcattgtccataccaactgagctaagctcac 19854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 30780204 - 30780128
Alignment:
Q  2 ttttgtggtggccggggttcgaacccagatc-ttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||||| |||||| ||| || || | ||| ||||||||||||||| || ||| |||||||||||| |||||    
T  30780204 ttttgtggtggcgggggtttgaatcccgaaccttatatattttatgcattgtccataccaactgagttaagctcacg 30780128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7464476 - 7464554
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| ||||||| |||||| | | ||||||||| |||||||||| |||||| |||||||||||| ||||||    
T  7464476 tttttgtggtggtcggggtttgaaccccggaccttacatatattatgcattgtccctaccaactgagttaagctcacga 7464554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 25441485 - 25441567
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagac 82  Q
    |||||||||||||||||||| ||| |||||| ||| ||||| |||||||||| || ||| ||||||| ||||||||| |||||    
T  25441485 tttttgtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaagttcacaaagac 25441567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32909286 - 32909364
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||||| || |||||||| | ||| |||||||||||||||| || ||| |||||||||||| ||||||    
T  32909286 tttttgtggtggccgggatttgaacccaggaccttgcatattttatgcattgtccatactaactgagttaagctcacga 32909364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5186908 - 5186831
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||| |||||||| ||||||||| ||| ||||| ||| |||||| |||||| | |||||||||| ||||||    
T  5186908 tttttgtggtgtccggggtttgaacccagaccttgcatatattaagcattgtccctaccagctgagttaagctcacga 5186831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 51882185 - 51882262
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||||||||||||| |||||| | ||||| ||||| |||||||||| || ||| |||||||||||| |||||    
T  51882185 tttttgtggtggccggggtttgaaccctggatcttgcatatattatgcattgtccataccaactgagttaagctcacg 51882262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13829062 - 13829145
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||| ||||||| ||||||||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||  |||||| ||||    
T  13829062 tttttatggtggcaggggttcgaaccccagaccttgcatatattatgcattgtccctaaaaactgagttaaactcacgatgact 13829145  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2186412 - 2186490
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||| ||| ||||||| |||||| ||| ||||||||| ||||| |||| || ||| |||||||||||||||||||    
T  2186412 tttttgtgatggtcggggtttgaaccccagaccttacatatattatgtattgtccataccaactgagttaagttcacga 2186490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3176959 - 3177029
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    ||||||||||||||| ||||  |||||||| ||| ||||| ||||||||||  ||||| ||||||||||||    
T  3176959 tttttgtggtggccgtggtttaaacccagaccttgcatatattatgcattgttcctaccaactgagttaag 3177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14827601 - 14827523
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||||||||||||  ||||| | ||||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  14827601 tttttgtggtggccggggtttaaaccccggatcttgcatattttatgcattgtccataccaactgagctaagctcacga 14827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8113547 - 8113624
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    ||||||||||||||||| |||||||| | |||||| ||||| |||||||||| || ||| ||||||| |||| |||||    
T  8113547 tttttgtggtggccgggattcgaaccgcggatcttgcatatattatgcattgtccttaccaactgagctaagctcacg 8113624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10922293 - 10922370
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||| | ||||||| |||||| | ||||| ||||| |||||||||| |||||| |||||||||||| |||||    
T  10922293 tttttgtggtagtcggggtttgaaccccggatcttgcatatattatgcattgtccctaccaactgagttaagctcacg 10922370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14771407 - 14771330
Alignment:
Q  1 tttttgtggtggccggggttcgaacc-cagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    ||||||||||| ||||| |||||||| |||| ||| ||||| |||||||||   ||||| ||||||||||||||||||    
T  14771407 tttttgtggtgtccgggattcgaacctcagaccttgcatatattatgcattatgcctactaactgagttaagttcacg 14771330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 32957502 - 32957547
Alignment:
Q  38 tattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||    
T  32957502 tattttatgcattgtccctaccaactgagctaagttcacgaagact 32957547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38309569 - 38309618
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcatt 50  Q
    ||||||||||||| |||| ||||||||||||||| ||||| |||||||||    
T  38309569 tttttgtggtggctggggctcgaacccagatcttgcatatattatgcatt 38309618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 46469352 - 46469276
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    ||||||||||||||||| ||||||||| || |||  |||| |||||||||| || ||| ||||||| |||| |||||    
T  46469352 tttttgtggtggccgggattcgaaccccgaccttgaatatattatgcattgtccttaccaactgagctaagctcacg 46469276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 53996375 - 53996299
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    ||||||||||||||||| |||||| |||||| ||| ||||| |||||||||| || ||| ||||||| |||| ||||    
T  53996375 tttttgtggtggccgggattcgaaccccagaccttgcatatattatgcattgtccataccaactgagctaagctcac 53996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1149054 - 1149132
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||| || |||||||||||| ||| ||| ||||| |||||||||| || ||| ||||||| |||| ||||||    
T  1149054 tttttgtggtgtccagggttcgaaccctagaccttgcatatattatgcattgtccttaccaactgagctaagctcacga 1149132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4947811 - 4947861
Alignment:
Q  1 tttttgtggtggccggggttcgaaccc-agatcttacatattttatgcatt 50  Q
    |||||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  4947811 tttttgtggtggtcggggttcaaaccccagaccttacatattttatgcatt 4947861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 7738709 - 7738667
Alignment:
Q  36 catattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||| |||||| |||||||||||| ||||||    
T  7738709 catattttatgcattgtccctaccaactgagttaagctcacga 7738667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7827584 - 7827514
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    |||||||||||| |||| ||||||| ||||| ||||||||| |||||||||| || ||  |||||||||||    
T  7827584 tttttgtggtggtcgggtttcgaactccagaccttacatatattatgcattgtccatatcaactgagttaa 7827514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8942092 - 8942010
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    |||||||||||| | || |||||| |||||  || ||||| ||||||||||  | ||| |||||||||||| |||||||||||    
T  8942092 tttttgtggtggtcaggattcgaatccagactttgcatatattatgcattgttcataccaactgagttaagctcacgaagact 8942010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20465543 - 20465625
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacgaagact 83  Q
    ||||| |||||| ||| ||||||||||| | |||||||||||||| ||||| |  ||  ||| |||||| |||||||||||||    
T  20465543 tttttatggtggtcggagttcgaacccaaaccttacatattttatacattgtctatatcaacagagttatgttcacgaagact 20465625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25340909 - 25340987
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||||||||||||| |||||| | | ||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  25340909 ttttggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacga 25340987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28244089 - 28244167
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||  |||||||||||||| | | ||| ||||||||||||||||  | ||| |||||||||||| ||||||    
T  28244089 tttttgtggtgatcggggttcgaaccccggaccttgcatattttatgcattgttcataccaactgagttaagctcacga 28244167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31138492 - 31138442
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattg 51  Q
    |||||||||||| ||||||| ||||| ||||||| ||||| ||||||||||    
T  31138492 tttttgtggtggtcggggtttgaacctagatcttgcatatattatgcattg 31138442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 32843251 - 32843325
Alignment:
Q  5 tgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||| |||||| ||| ||| |||||||||||||||| ||  || ||||||| |||| ||||||    
T  32843251 tgtggtggccggggtttgaaccccagaccttgcatattttatgcattgtccaaaccaactgagctaagctcacga 32843325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33633303 - 33633381
Alignment:
Q  1 tttttgtggtggccggggttcgaac-ccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| | | |||||||| || |||||||||||| |||||||||| |  ||| |||||||||||| ||||||    
T  33633303 tttttgtggtggtcagagttcgaactccggatcttacatatattatgcattgtctatactaactgagttaagctcacga 33633381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 34442440 - 34442510
Alignment:
Q  9 gtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||| |||||| | | |||||||||||||||||||| ||| || ||||||| |||| ||||||    
T  34442440 gtggccggggtttgaaccccggaccttacatattttatgcattgtcccaactaactgagctaagctcacga 34442510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44579712 - 44579634
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||| | ||||||||||||||| | | ||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  44579712 tttttgtggcgcccggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacga 44579634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49088827 - 49088777
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattg 51  Q
    |||||||||||| |||| ||||||| || | ||||||||||||||||||||    
T  49088827 tttttgtggtggtcgggattcgaactcaaaccttacatattttatgcattg 49088777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4216385 - 4216462
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| |||||| || |||||||||||| || ||| ||||| |||||||||| || ||  ||||||| |||||||||||    
T  4216385 ttttggtggtgtccagggttcgaaccccgaccttgcatatattatgcattgtccttatcaactgagctaagttcacga 4216462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 27432309 - 27432232
Alignment:
Q  2 ttttgtggtggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||||||||||||  ||||||||| | | ||||||||| ||||||||||  | ||| |||| ||||||||||||||    
T  27432309 ttttgtggtggccggaattcgaaccccataccttacatatattatgcattgtacataccaactaagttaagttcacga 27432232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 44968223 - 44968182
Alignment:
Q  30 atcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||||||||||||||||||||| || ||| ||||||||||||    
T  44968223 atcttacatattttatgcattgtccataccaactgagttaag 44968182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48657802 - 48657859
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgacccta 57  Q
    |||||||||||| |||||||||||||| | ||||||||||| ||||| |||| |||||    
T  48657802 tttttgtggtggtcggggttcgaaccccgaatcttacatatattatggattgtcccta 48657859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53706899 - 53706822
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||| ||||||||| |||||| || ||||||||||| |||||||| || ||| || | ||||||| ||||||    
T  53706899 ttttggtggttgccggggtttgaacccggaccttacatatttaatgcattgtccttaccaattaagttaagctcacga 53706822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 17588413 - 17588361
Alignment:
Q  25 cccagatcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||||||||| ||||| |||||||||| || ||| |||||||||||| |||||    
T  17588413 cccagatcttgcatatattatgcattgtccttaccaactgagttaagctcacg 17588361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 21506753 - 21506821
Alignment:
Q  11 ggccggggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||||||||| ||||| ||| ||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  21506753 ggccggggttcaaaccccagaccttgcatattttatgcattgtccataccaactgagctaagctcacga 21506821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 25505701 - 25505757
Alignment:
Q  16 gggttcgaaccc-agatcttacatattttatgcattgaccctacaaactgagttaag 71  Q
    |||||||||||| ||| ||| ||||| |||||||||| || ||||||||||||||||    
T  25505701 gggttcgaaccccagaccttgcatatattatgcattgtccttacaaactgagttaag 25505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38130944 - 38131020
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||| ||||||||||||||| |||||| | | ||| ||||| |||||||||| || ||| |||||||||||| ||||    
T  38130944 ttttggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagctcac 38131020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 41442933 - 41442989
Alignment:
Q  22 gaacccagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||||| |||||||||||| | |||||||| || ||| || ||||||||||||||||    
T  41442933 gaaccccgatcttacatatataatgcattgtccttaccaattgagttaagttcacga 41442989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 46226068 - 46226132
Alignment:
Q  6 gtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagttaa 70  Q
    |||||| | ||||||||||||| || ||| ||||| |||||||||| |||||| || ||||||||    
T  46226068 gtggtgtctggggttcgaacccggaccttgcatatattatgcattgtccctaccaattgagttaa 46226132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 1072 - 1123
Alignment:
Q  27 cagatcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    |||| ||||||||| |||||||||| |||||| |||||||||||| ||||||    
T  1072 cagaccttacatatattatgcattgtccctactaactgagttaagctcacga 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1697 - 1767
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatc-ttacatattttatgcattgaccctacaaactgagttaa 70  Q
    ||||||||||||| ||||||| ||||  || | || |||||||||||||||| |||||| |||||||||||    
T  1697 tttttgtggtggctggggttcaaacctcgaaccttgcatattttatgcattgtccctaccaactgagttaa 1767  T

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Target: scaffold0576 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 9745 - 9811
Alignment:
Q  2 ttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgagtt 68  Q
    ||||||||||| ||||||| ||||||| | ||| ||||| |||||||||| || ||| |||||||||    
T  9745 ttttgtggtggtcggggtttgaacccaaaacttgcatatattatgcattgcccatactaactgagtt 9811  T

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Target: scaffold0735 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1604 - 1527
Alignment:
Q  1 tttttgtggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacg 77  Q
    |||| |||||||| ||||||||||||| | | ||| |||||||||||||||| || ||| ||||||| |||| |||||    
T  1604 ttttggtggtggcgggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacg 1527  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 118666 - 118601
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatcttacatattttatgcattgaccctacaaactgag 66  Q
    ||||||||||||||||  ||||||||| || | ||||||| |||||||||| || ||| |||||||    
T  118666 tttttgtggtggccggaattcgaaccctgaccgtacatatattatgcattgtccttaccaactgag 118601  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7056 - 7004
Alignment:
Q  1 tttttgtggtggccggggttcgaa-cccagatcttacatatt-ttatgcattg 51  Q
    ||||||||||||||||| |||||| |||||| |||||||||| ||||||||||    
T  7056 tttttgtggtggccgggattcgaaccccagaccttacatattattatgcattg 7004  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 161217 - 161141
Alignment:
Q  1 tttttgtggtggccggggttcgaacccagatc-ttacatattttatgcattgaccctacaaactgagttaagttcac 76  Q
    |||| ||||||| ||||||| |||||| || | || |||||||||||||||| || ||| |||||||||||| ||||    
T  161217 ttttggtggtggtcggggtttgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcac 161141  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 185333 - 185261
Alignment:
Q  7 tggtggccggggttcgaacccag-atcttacatattttatgcattgaccctacaaactgagttaagttcacga 78  Q
    ||||| |||||||| |||||| | ||||| |||||||||||||||| || ||| ||||||| |||| ||||||    
T  185333 tggtgaccggggtttgaaccccggatcttgcatattttatgcattgtccataccaactgagctaagctcacga 185261  T

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