View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12174_low_4 (Length: 637)

Name: NF12174_low_4
Description: NF12174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12174_low_4
NF12174_low_4
[»] chr6 (35 HSPs)
chr6 (66-379)||(15576375-15576688)
chr6 (462-617)||(15576189-15576344)
chr6 (70-312)||(15574462-15574708)
chr6 (402-552)||(16527772-16527913)
chr6 (132-309)||(16526916-16527093)
chr6 (402-530)||(1755666-1755794)
chr6 (1-67)||(5994698-5994764)
chr6 (1-66)||(5004061-5004126)
chr6 (1-66)||(23925335-23925400)
chr6 (1-66)||(25506541-25506606)
chr6 (1-66)||(25550295-25550360)
chr6 (1-66)||(30824529-30824594)
chr6 (1-66)||(35091676-35091741)
chr6 (2-66)||(13825703-13825767)
chr6 (3-66)||(11279837-11279900)
chr6 (1-64)||(25991852-25991915)
chr6 (163-308)||(12972738-12972883)
chr6 (1-67)||(33298084-33298150)
chr6 (14-66)||(5489132-5489184)
chr6 (4-67)||(15391614-15391677)
chr6 (463-552)||(30355260-30355349)
chr6 (12-68)||(13490191-13490247)
chr6 (5-67)||(11053701-11053764)
chr6 (402-519)||(12972509-12972626)
chr6 (446-545)||(15574842-15574941)
chr6 (245-380)||(17860693-17860828)
chr6 (5-66)||(30114444-30114505)
chr6 (461-509)||(12974270-12974318)
chr6 (552-603)||(13194291-13194342)
chr6 (70-124)||(17860886-17860940)
chr6 (422-467)||(7837121-7837166)
chr6 (152-272)||(8322602-8322722)
chr6 (427-467)||(17695705-17695745)
chr6 (553-622)||(6091920-6091989)
chr6 (427-467)||(11126599-11126639)
[»] chr5 (47 HSPs)
chr5 (151-530)||(24841367-24841754)
chr5 (141-382)||(11274630-11274871)
chr5 (70-327)||(17027056-17027316)
chr5 (78-309)||(22754483-22754718)
chr5 (402-545)||(17027400-17027543)
chr5 (427-530)||(11274445-11274547)
chr5 (1-67)||(24956846-24956912)
chr5 (1-67)||(24965309-24965375)
chr5 (1-69)||(1728159-1728227)
chr5 (1-67)||(20372913-20372979)
chr5 (1-66)||(20398635-20398700)
chr5 (1-66)||(29186278-29186343)
chr5 (1-66)||(43598046-43598111)
chr5 (1-66)||(43603538-43603603)
chr5 (1-66)||(43609030-43609095)
chr5 (3-67)||(28852549-28852613)
chr5 (3-66)||(28843940-28844003)
chr5 (1-67)||(23350076-23350142)
chr5 (1-66)||(19223555-19223620)
chr5 (1-66)||(31421789-31421854)
chr5 (149-382)||(23125219-23125454)
chr5 (3-66)||(31410890-31410953)
chr5 (402-487)||(12029493-12029578)
chr5 (461-545)||(25594791-25594875)
chr5 (469-552)||(17382127-17382210)
chr5 (138-292)||(19331160-19331315)
chr5 (461-552)||(30072111-30072201)
chr5 (403-539)||(22754829-22754958)
chr5 (460-535)||(22967951-22968026)
chr5 (485-552)||(24517310-24517377)
chr5 (552-617)||(11273683-11273748)
chr5 (461-538)||(22229741-22229818)
chr5 (5-63)||(41099780-41099838)
chr5 (402-519)||(22643989-22644105)
chr5 (552-624)||(17768641-17768713)
chr5 (553-617)||(19571048-19571112)
chr5 (427-467)||(20860430-20860470)
chr5 (427-467)||(34133866-34133906)
chr5 (407-454)||(11274548-11274595)
chr5 (553-603)||(24518964-24519014)
chr5 (460-530)||(24846192-24846262)
chr5 (461-537)||(15205577-15205653)
chr5 (553-622)||(18451061-18451130)
chr5 (17-66)||(21929236-21929285)
chr5 (427-467)||(22938049-22938089)
chr5 (557-617)||(25682147-25682207)
chr5 (458-530)||(26070404-26070475)
[»] chr7 (56 HSPs)
chr7 (70-378)||(21471316-21471628)
chr7 (70-309)||(5721920-5722164)
chr7 (402-538)||(7494584-7494720)
chr7 (406-552)||(20470902-20471049)
chr7 (1-66)||(12978455-12978520)
chr7 (1-66)||(18304392-18304457)
chr7 (406-545)||(21471674-21471813)
chr7 (5-67)||(4941581-4941643)
chr7 (1-67)||(10439936-10440002)
chr7 (1-67)||(4952397-4952463)
chr7 (1-67)||(13831499-13831565)
chr7 (1-67)||(13839530-13839596)
chr7 (461-552)||(29544451-29544542)
chr7 (2-66)||(30244775-30244839)
chr7 (402-513)||(9761537-9761646)
chr7 (406-503)||(3269123-3269220)
chr7 (151-274)||(7955796-7955920)
chr7 (461-557)||(2632523-2632619)
chr7 (461-530)||(7142030-7142099)
chr7 (8-67)||(21663030-21663089)
chr7 (8-66)||(30245568-30245626)
chr7 (8-58)||(30255420-30255470)
chr7 (451-513)||(9801996-9802057)
chr7 (552-622)||(21544679-21544749)
chr7 (463-527)||(2353357-2353421)
chr7 (461-552)||(20446171-20446262)
chr7 (461-553)||(23124833-23124924)
chr7 (553-624)||(7494484-7494555)
chr7 (406-529)||(16536689-16536811)
chr7 (402-529)||(16577387-16577513)
chr7 (402-529)||(16588149-16588275)
chr7 (406-529)||(16628851-16628973)
chr7 (402-484)||(1074341-1074422)
chr7 (155-307)||(1074076-1074229)
chr7 (402-463)||(7956058-7956119)
chr7 (462-519)||(18496498-18496555)
chr7 (461-513)||(21545929-21545984)
chr7 (552-620)||(7143571-7143639)
chr7 (552-624)||(7776350-7776422)
chr7 (427-467)||(13287676-13287716)
chr7 (427-467)||(26137034-26137074)
chr7 (558-617)||(9071392-9071451)
chr7 (553-624)||(18494555-18494626)
chr7 (548-603)||(21473039-21473094)
chr7 (473-538)||(7815267-7815332)
chr7 (457-503)||(22532784-22532830)
chr7 (579-620)||(7152116-7152157)
chr7 (553-614)||(14074486-14074547)
chr7 (553-614)||(14384514-14384575)
chr7 (427-467)||(2506786-2506826)
chr7 (427-467)||(4596918-4596958)
chr7 (427-467)||(15170730-15170770)
chr7 (150-202)||(16166702-16166754)
chr7 (427-467)||(19154909-19154949)
chr7 (427-467)||(20754308-20754348)
chr7 (427-467)||(39270239-39270279)
[»] chr8 (51 HSPs)
chr8 (70-382)||(16052557-16052873)
chr8 (131-315)||(28901685-28901869)
chr8 (405-552)||(24120107-24120254)
chr8 (402-552)||(16052369-16052519)
chr8 (410-530)||(22894648-22894768)
chr8 (1-66)||(17973565-17973630)
chr8 (141-289)||(22894905-22895054)
chr8 (1-66)||(30938282-30938347)
chr8 (1-67)||(39837562-39837628)
chr8 (1-66)||(26876054-26876119)
chr8 (1-66)||(39845605-39845670)
chr8 (3-66)||(1407075-1407138)
chr8 (1-67)||(26873604-26873670)
chr8 (454-544)||(28252481-28252571)
chr8 (402-552)||(28901432-28901582)
chr8 (1-66)||(4839782-4839847)
chr8 (1-66)||(25579812-25579877)
chr8 (402-552)||(10866861-10867011)
chr8 (1-67)||(17664640-17664706)
chr8 (444-552)||(13082029-13082137)
chr8 (1-66)||(17683796-17683861)
chr8 (241-382)||(24119925-24120066)
chr8 (148-335)||(12755799-12755987)
chr8 (406-487)||(5570305-5570386)
chr8 (471-552)||(12956431-12956512)
chr8 (471-552)||(14977199-14977280)
chr8 (5-67)||(6670710-6670772)
chr8 (406-489)||(28973490-28973573)
chr8 (469-530)||(11310318-11310379)
chr8 (460-552)||(16054225-16054317)
chr8 (428-513)||(29291670-29291755)
chr8 (461-552)||(32239219-32239310)
chr8 (5-67)||(4582203-4582265)
chr8 (460-558)||(6358629-6358727)
chr8 (552-614)||(12957559-12957621)
chr8 (244-301)||(5570508-5570565)
chr8 (552-617)||(32240446-32240511)
chr8 (461-552)||(29047408-29047499)
chr8 (554-617)||(13305658-13305721)
chr8 (552-603)||(13803096-13803147)
chr8 (9-66)||(6663042-6663099)
chr8 (9-66)||(6743444-6743501)
chr8 (243-309)||(28292459-28292525)
chr8 (459-513)||(30851230-30851284)
chr8 (422-467)||(26829427-26829472)
chr8 (579-624)||(26853601-26853646)
chr8 (151-266)||(17099875-17099990)
chr8 (427-467)||(25180687-25180727)
chr8 (427-467)||(29765357-29765397)
chr8 (477-529)||(30543711-30543763)
chr8 (427-467)||(33878232-33878272)
[»] chr1 (46 HSPs)
chr1 (402-552)||(23223284-23223434)
chr1 (402-538)||(21451921-21452057)
chr1 (1-67)||(31548522-31548588)
chr1 (1-66)||(31539954-31540019)
chr1 (406-552)||(30675360-30675507)
chr1 (3-66)||(35104066-35104129)
chr1 (1-67)||(3432890-3432956)
chr1 (1-67)||(29221488-29221554)
chr1 (141-229)||(23223131-23223220)
chr1 (1-66)||(32137754-32137819)
chr1 (1-66)||(41746693-41746758)
chr1 (402-501)||(15299012-15299111)
chr1 (9-66)||(44320200-44320257)
chr1 (461-552)||(50047113-50047204)
chr1 (461-538)||(12424020-12424097)
chr1 (5-66)||(21498902-21498963)
chr1 (402-530)||(31313425-31313553)
chr1 (473-552)||(26657420-26657499)
chr1 (553-624)||(50048239-50048310)
chr1 (256-378)||(21452099-21452221)
chr1 (460-545)||(11770093-11770178)
chr1 (461-545)||(25730670-25730754)
chr1 (462-543)||(25777932-25778013)
chr1 (461-552)||(12810256-12810345)
chr1 (477-529)||(34935297-34935349)
chr1 (484-526)||(25266462-25266504)
chr1 (300-382)||(30675235-30675317)
chr1 (552-622)||(34522115-34522185)
chr1 (461-545)||(8247756-8247840)
chr1 (422-467)||(22624837-22624882)
chr1 (473-530)||(25965488-25965545)
chr1 (150-226)||(31313020-31313097)
chr1 (427-467)||(21914855-21914895)
chr1 (459-519)||(26101987-26102047)
chr1 (17-64)||(28457556-28457604)
chr1 (4-64)||(51058391-51058450)
chr1 (151-202)||(27754786-27754837)
chr1 (178-247)||(14397286-14397356)
chr1 (555-617)||(17836791-17836853)
chr1 (32-66)||(20314058-20314092)
chr1 (544-622)||(23224619-23224697)
chr1 (555-617)||(30676667-30676729)
chr1 (148-202)||(31313107-31313161)
chr1 (5-66)||(52100017-52100078)
chr1 (427-467)||(21912072-21912112)
chr1 (553-617)||(27682929-27682993)
[»] chr2 (51 HSPs)
chr2 (402-545)||(28278522-28278664)
chr2 (460-552)||(21505231-21505323)
chr2 (1-67)||(15944557-15944623)
chr2 (1-67)||(35138592-35138658)
chr2 (1-67)||(35146928-35146994)
chr2 (1-67)||(41233844-41233910)
chr2 (1-66)||(14582925-14582990)
chr2 (1-66)||(15953072-15953137)
chr2 (1-66)||(17687398-17687463)
chr2 (1-66)||(38168357-38168422)
chr2 (406-530)||(39730324-39730448)
chr2 (3-67)||(42565931-42565995)
chr2 (3-66)||(42574555-42574618)
chr2 (1-67)||(20621517-20621583)
chr2 (1-66)||(20372313-20372378)
chr2 (1-66)||(25483601-25483666)
chr2 (1-66)||(25491207-25491272)
chr2 (402-527)||(31449830-31449955)
chr2 (405-519)||(32276638-32276752)
chr2 (1-66)||(44372705-44372770)
chr2 (1-66)||(44388616-44388681)
chr2 (168-274)||(39730111-39730217)
chr2 (149-274)||(22389140-22389265)
chr2 (5-67)||(24292371-24292433)
chr2 (5-66)||(24285696-24285757)
chr2 (473-530)||(32619586-32619643)
chr2 (5-66)||(34070608-34070669)
chr2 (5-66)||(42249459-42249520)
chr2 (243-335)||(17415496-17415588)
chr2 (258-378)||(28278704-28278823)
chr2 (552-624)||(31000597-31000669)
chr2 (461-552)||(35707735-35707826)
chr2 (5-64)||(26903337-26903396)
chr2 (4-66)||(27606647-27606709)
chr2 (1-38)||(35037884-35037921)
chr2 (461-552)||(25473969-25474060)
chr2 (461-528)||(18236418-18236485)
chr2 (470-552)||(1733042-1733123)
chr2 (5-66)||(21322814-21322875)
chr2 (450-500)||(29769610-29769660)
chr2 (402-499)||(27918127-27918224)
chr2 (402-466)||(22388934-22388997)
chr2 (16-66)||(20917520-20917570)
chr2 (4-66)||(35303737-35303799)
chr2 (427-467)||(1504312-1504352)
chr2 (427-467)||(20379377-20379417)
chr2 (427-467)||(25873169-25873209)
chr2 (427-467)||(25886157-25886197)
chr2 (554-622)||(28455128-28455196)
chr2 (478-530)||(31914047-31914099)
chr2 (427-467)||(45456266-45456306)
[»] chr4 (35 HSPs)
chr4 (402-536)||(1676403-1676537)
chr4 (402-536)||(1682931-1683065)
chr4 (210-334)||(1696893-1697017)
chr4 (1-68)||(52295602-52295669)
chr4 (1-67)||(12996475-12996541)
chr4 (1-67)||(8094282-8094348)
chr4 (1-66)||(8103088-8103153)
chr4 (1-66)||(27343691-27343756)
chr4 (1-66)||(4523680-4523745)
chr4 (1-66)||(21532304-21532369)
chr4 (4-66)||(12428481-12428543)
chr4 (402-538)||(1696675-1696809)
chr4 (9-66)||(10638328-10638385)
chr4 (463-538)||(15192137-15192212)
chr4 (402-489)||(34850752-34850839)
chr4 (477-552)||(34864383-34864458)
chr4 (464-528)||(12111446-12111510)
chr4 (459-530)||(18897921-18897992)
chr4 (460-545)||(5906819-5906905)
chr4 (447-513)||(10576371-10576437)
chr4 (138-204)||(15787861-15787927)
chr4 (553-623)||(47023552-47023622)
chr4 (552-615)||(20717941-20718004)
chr4 (4-67)||(33188765-33188827)
chr4 (461-523)||(9288142-9288204)
chr4 (552-616)||(12840697-12840761)
chr4 (553-617)||(22219945-22220009)
chr4 (461-552)||(25315323-25315414)
chr4 (579-622)||(24580004-24580047)
chr4 (482-545)||(25050164-25050227)
chr4 (563-614)||(30797703-30797754)
chr4 (16-66)||(3424331-3424381)
chr4 (469-513)||(10320350-10320394)
chr4 (462-530)||(17339927-17339995)
chr4 (427-467)||(19826667-19826707)
[»] chr3 (47 HSPs)
chr3 (70-378)||(11520659-11520971)
chr3 (403-551)||(21017750-21017899)
chr3 (402-527)||(13911138-13911263)
chr3 (1-66)||(50824352-50824417)
chr3 (1-66)||(50851443-50851508)
chr3 (2-66)||(17628265-17628329)
chr3 (1-67)||(8154644-8154710)
chr3 (1-67)||(9525434-9525500)
chr3 (1-67)||(41006555-41006621)
chr3 (1-67)||(41015335-41015401)
chr3 (461-544)||(25919564-25919647)
chr3 (1-67)||(14538605-14538671)
chr3 (1-67)||(17933654-17933720)
chr3 (1-67)||(27341335-27341401)
chr3 (1-66)||(9555108-9555173)
chr3 (2-66)||(2211239-2211303)
chr3 (2-66)||(28470218-28470282)
chr3 (4-67)||(17919198-17919261)
chr3 (402-501)||(8402693-8402792)
chr3 (461-552)||(17637035-17637126)
chr3 (151-291)||(5632859-5633000)
chr3 (4-67)||(16816207-16816269)
chr3 (5-67)||(8197700-8197762)
chr3 (9-66)||(18039011-18039068)
chr3 (402-466)||(5632668-5632732)
chr3 (4-66)||(21186747-21186809)
chr3 (5-66)||(30480-30541)
chr3 (5-62)||(18349560-18349617)
chr3 (4-64)||(43470556-43470615)
chr3 (428-479)||(11521039-11521090)
chr3 (492-552)||(33914654-33914714)
chr3 (470-544)||(12573231-12573305)
chr3 (470-544)||(13549695-13549769)
chr3 (465-530)||(16970177-16970241)
chr3 (461-538)||(19219317-19219394)
chr3 (558-622)||(10343000-10343064)
chr3 (427-467)||(10883984-10884024)
chr3 (461-528)||(18065761-18065828)
chr3 (461-550)||(1475374-1475463)
chr3 (464-530)||(31477705-31477771)
chr3 (556-617)||(33913400-33913461)
chr3 (39-67)||(6958978-6959006)
chr3 (218-266)||(8770880-8770928)
chr3 (427-467)||(16223572-16223612)
chr3 (427-467)||(18541774-18541814)
chr3 (427-467)||(31283869-31283909)
chr3 (427-467)||(47053927-47053967)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-66)||(35356-35421)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-66)||(121228-121293)
scaffold0002 (461-538)||(446937-447014)
[»] scaffold0497 (1 HSPs)
scaffold0497 (1-66)||(10993-11058)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-66)||(33035-33100)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-66)||(15813-15878)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-66)||(40833-40898)
[»] scaffold0209 (1 HSPs)
scaffold0209 (3-66)||(86-149)
[»] scaffold0016 (1 HSPs)
scaffold0016 (8-67)||(23463-23522)
[»] scaffold0282 (1 HSPs)
scaffold0282 (406-528)||(22661-22783)
[»] scaffold0173 (1 HSPs)
scaffold0173 (4-67)||(932-995)
[»] scaffold0431 (1 HSPs)
scaffold0431 (4-66)||(139-201)
[»] scaffold0632 (1 HSPs)
scaffold0632 (1-66)||(4390-4455)
[»] scaffold1026 (2 HSPs)
scaffold1026 (404-523)||(1952-2071)
scaffold1026 (168-304)||(2186-2323)
[»] scaffold0048 (3 HSPs)
scaffold0048 (20-66)||(7648-7694)
scaffold0048 (427-467)||(24001-24041)
scaffold0048 (427-467)||(28239-28279)
[»] scaffold0991 (1 HSPs)
scaffold0991 (5-66)||(377-438)
[»] scaffold0015 (1 HSPs)
scaffold0015 (5-68)||(192526-192589)
[»] scaffold0863 (1 HSPs)
scaffold0863 (5-67)||(376-438)
[»] scaffold0170 (1 HSPs)
scaffold0170 (4-66)||(7193-7255)
[»] scaffold0044 (2 HSPs)
scaffold0044 (5-67)||(81790-81852)
scaffold0044 (5-67)||(65542-65604)
[»] scaffold0171 (3 HSPs)
scaffold0171 (461-538)||(6128-6205)
scaffold0171 (553-625)||(7349-7421)
scaffold0171 (468-530)||(21336-21398)
[»] scaffold0386 (2 HSPs)
scaffold0386 (461-537)||(8816-8892)
scaffold0386 (476-545)||(13170-13239)
[»] scaffold1487 (1 HSPs)
scaffold1487 (20-59)||(762-801)
[»] scaffold0990 (2 HSPs)
scaffold0990 (211-314)||(3134-3237)
scaffold0990 (131-183)||(3075-3127)
[»] scaffold0514 (1 HSPs)
scaffold0514 (5-67)||(10912-10974)
[»] scaffold0188 (1 HSPs)
scaffold0188 (470-530)||(27068-27128)
[»] scaffold0389 (1 HSPs)
scaffold0389 (5-67)||(415-477)
[»] scaffold0222 (1 HSPs)
scaffold0222 (4-66)||(20485-20547)
[»] scaffold0484 (1 HSPs)
scaffold0484 (17-66)||(11457-11507)
[»] scaffold0210 (1 HSPs)
scaffold0210 (402-464)||(25216-25278)
[»] scaffold0027 (1 HSPs)
scaffold0027 (33-67)||(65710-65744)
[»] scaffold0084 (1 HSPs)
scaffold0084 (427-468)||(28544-28585)
[»] scaffold0321 (1 HSPs)
scaffold0321 (427-467)||(3841-3881)
[»] scaffold0270 (1 HSPs)
scaffold0270 (427-467)||(1054-1094)
[»] scaffold0198 (1 HSPs)
scaffold0198 (422-466)||(3979-4023)
[»] scaffold0072 (1 HSPs)
scaffold0072 (427-467)||(38382-38422)
[»] scaffold0007 (1 HSPs)
scaffold0007 (8-66)||(61288-61347)


Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 66 - 379
Target Start/End: Complemental strand, 15576688 - 15576375
Alignment:
Q  66 agcatactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatgccttcggtgtgtatggtgatatagaccttgaatgtctattt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  15576688 agcatactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatgcctccagtgtgtatggtgatatagaccttgaatgtctattt 15576589  T
Q  166 agaattgcttcaatctcatagtaaggtacaatcacatgatgactgagtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtat 265  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  15576588 cgaattgcttcaatctcatagtaaggtacaatcacatgatggctgagtgtgacaaatgccttgaccagccccaccggctttaggaggtatatacgtgtat 15576489  T
Q  266 cttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtgggatgagtga 365  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15576488 cttggaattttatttggttgaaagtaattgtatcttctctaagtttgttcctcttgcatggaaatggtaatatagttacgtctgacggtgggatgagtga 15576389  T
Q  366 caatctgagcaaaa 379  Q
    ||||||||||||||    
T  15576388 caatctgagcaaaa 15576375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 462 - 617
Target Start/End: Complemental strand, 15576344 - 15576189
Alignment:
Q  462 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgttgatggacg 561  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15576344 gatgatggagcatcatatgatatttttggctatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagaggagttgttgatggacg 15576245  T
Q  562 aaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  15576244 aaattggcaagtgcatcaaatcgtaacaagtaataaagtagtcagtttatcgttct 15576189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 70 - 312
Target Start/End: Original strand, 15574462 - 15574708
Alignment:
Q  70 tactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatgcct---tcggtgtgtatggtgatatagaccttgaatgtctattta 166  Q
    ||||||| |||||||| ||||||||||||||| |||||| |||||||||||||  |||   |  ||||||||  ||||||| ||||||||||||||| ||    
T  15574462 tactttcccaaatatatcccaccttaacctcagccacgttataaccttgaaaagtcctctatatgtgtgtataatgatataaaccttgaatgtctatgta 15574561  T
Q  167 gaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtat 265  Q
     ||||||||||||||||||| ||| |||||||||||||  | | |||||||  |||||| ||||||||  |||   ||||||| || |||||| ||||||    
T  15574562 taattgcttcaatctcatagcaagatacaatcacatgacaagtagagtgtggtaaatgctttgaccagtgccacaagctttagaagatacatatgtgtat 15574661  T
Q  266 cttggaattttatctggttgaaagtaattgtatcttctctaagtttg 312  Q
    ||||||||  ||| |||||||||||||  ||||| ||||||||||||    
T  15574662 cttggaatcatatgtggttgaaagtaagagtatcctctctaagtttg 15574708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 402 - 552
Target Start/End: Original strand, 16527772 - 16527913
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||| |||||||||   ||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||    
T  16527772 attctaacgtcttgctat---gttgcttgaggacaagaaccggtttaagtttggggttgtgatggcagagcatcatataatatttttggctatgttttta 16527868  T
Q  502 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||||||||      |||||||||| ||||||| |||||| ||||||    
T  16527869 gtacttttctttg------aagacaaataagatgagagttagaggagttgt 16527913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 132 - 309
Target Start/End: Original strand, 16526916 - 16527093
Alignment:
Q  132 tgtgtatggtgatatagaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgac 230  Q
    ||||| || ||||||| ||||||||||||| ||||||||||||| ||| | |||| ||||||||||||||||| |||| |||||||| | ||| ||||||    
T  16526916 tgtgtgtgatgatatataccttgaatgtctgtttagaattgctttaatgttatagaaaggtacaatcacatgacgactggagtgtgaaatatgtcttgac 16527015  T
Q  231 cagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagt 309  Q
    ||| ||||  | ||||| |||||||||| |||||||||| |||| ||| ||||||||| |||  |||||||||||||||    
T  16527016 cag-cccactgactttaagaggtacatatgtgtatcttgaaattgtatgtggttgaaattaagagtatcttctctaagt 16527093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 530
Target Start/End: Complemental strand, 1755794 - 1755666
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||||||| || ||| |||| || ||||||| | ||  ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  1755794 attctaacttctcgcaattttgttgctagaggacaggtaatagtttaagtttggggttgtgatgacggagcatcatatgatatatcaggttatgttttta 1755695  T
Q  502 gtacttttctttgaatttaaagacaaata 530  Q
    ||  |||||||||||||| ||||||||||    
T  1755694 gttattttctttgaatttgaagacaaata 1755666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5994764 - 5994698
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5994764 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 5994698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5004126 - 5004061
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5004126 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 5004061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23925400 - 23925335
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23925400 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 23925335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25506541 - 25506606
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25506541 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 25506606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25550360 - 25550295
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25550360 cgactttaaaaatatgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 25550295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30824529 - 30824594
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30824529 cgactttaaaaatacaaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 30824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35091676 - 35091741
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35091676 cgactttaaaaatatgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 13825767 - 13825703
Alignment:
Q  2 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13825767 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 13825703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 11279900 - 11279837
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11279900 actttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 11279837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25991915 - 25991852
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatga 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25991915 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaacatttggggtatga 25991852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 163 - 308
Target Start/End: Complemental strand, 12972883 - 12972738
Alignment:
Q  163 tttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgt 261  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| | ||||||| ||||||||||||||||| | | | | |||| || | |||||| |    
T  12972883 tttagaattgattcaatctcatagcaaggtacaatcacatgatgattggagtgtggcaaatgccttgaccagcacta-ctgatttaagaagaacatacat 12972785  T
Q  262 gtatcttggaattttatctggttgaaagtaattgtatcttctctaag 308  Q
    |||||||||||||| |  | |||||||||||  ||||||||||||||    
T  12972784 gtatcttggaatttcaagtagttgaaagtaagggtatcttctctaag 12972738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33298150 - 33298084
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  33298150 cgactttaaaaatacgaataaaatgggtaaggatagagaaaagtggtcaaaagttggggtatgacag 33298084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 5489132 - 5489184
Alignment:
Q  14 acgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5489132 acgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 5489184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 15391614 - 15391677
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  15391614 ctttaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttgggatatgacag 15391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 463 - 552
Target Start/End: Original strand, 30355260 - 30355349
Alignment:
Q  463 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||| |||| |||  ||||| ||||||| |||||| ||||||    
T  30355260 atgacggagcatcatatgatatttttggctatgtttttagtacttttacttgcatttgaaggtaaataagatgagagttagagaagttgt 30355349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 13490247 - 13490191
Alignment:
Q  12 atacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacagc 68  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  13490247 atacgaataaaatggataaaaatagagaaaagtggtcaaaatttggggtatgacagc 13490191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 11053764 - 11053701
Alignment:
Q  5 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||    
T  11053764 tttaaaaatacgaataaaatttggtaaaaatagaaaaaagtggtcaaaatttggggtatgacag 11053701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 519
Target Start/End: Complemental strand, 12972626 - 12972509
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||||| |||||||| || | ||| || | ||| |||  |||||||||||||| |||||||  || |||||| |||||||||||| ||||||||||    
T  12972626 attctaacttgttgctattttggtgctttagaagaagcaacaatttaagtttggggtagtgatgatagaacatcatttgatatttttggctatgttttta 12972527  T
Q  502 gtacttttctttgaattt 519  Q
    ||  ||||||||| ||||    
T  12972526 gttattttctttgcattt 12972509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 446 - 545
Target Start/End: Original strand, 15574842 - 15574941
Alignment:
Q  446 ttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 544  Q
    |||||||||||||| ||||||| || |||||||||| | |||||| ||| || ||||||| ||||||||| |||| |||||||||| ||||||| |||||    
T  15574842 ttaagtttggggttatgatgacagaacatcatatgaca-ttttggctatcttgttagtactttttctttgcatttgaagacaaataagatgagatttaga 15574940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 380
Target Start/End: Complemental strand, 17860828 - 17860693
Alignment:
Q  245 ttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttac 344  Q
    |||||||||||||| |||||| || ||||| ||| |||||||||||||  |||| ||||||||   |||||  |||||||||||  |||||  ||||||     
T  17860828 ttaggaggtacatatgtgtatattagaattgtatgtggttgaaagtaagagtatgttctctaaaaatgttccgcttgcatggaagaggtaagctagttaa 17860729  T
Q  345 gtctgatggtgggatgagtgacaatctgagcaaaat 380  Q
    |||||||| ||||  || | | ||||||||||||||    
T  17860728 gtctgatgatgggtggaataaaaatctgagcaaaat 17860693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 30114505 - 30114444
Alignment:
Q  5 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  30114505 tttaaaaatacgaataaaatttggtaaaaataga-aaaagtggtcaaaatttggggtatgaca 30114444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 509
Target Start/End: Original strand, 12974270 - 12974318
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt 509  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||    
T  12974270 tgatgacggagcatcatatgatattttttgctatggttttagtactttt 12974318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 552 - 603
Target Start/End: Complemental strand, 13194342 - 13194291
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 603  Q
    ||||||||||||||| |||||| ||  |||||||||||||||||||||||||    
T  13194342 ttgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagt 13194291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 17860940 - 17860886
Alignment:
Q  70 tactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatg 124  Q
    |||||| ||||||||| |||||||||||||||  ||||| |||||||||||||||    
T  17860940 tactttttcaaatatatcccaccttaacctcagtcacgttataaccttgaaaatg 17860886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 422 - 467
Target Start/End: Original strand, 7837121 - 7837166
Alignment:
Q  422 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  7837121 tgtttcttgaggacaagtaacagtttaagtttgaggttgtgatgac 7837166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 8322602 - 8322722
Alignment:
Q  152 ttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccagccccatcggctttagga 250  Q
    |||||||||  |||||||||| |||||  |||||| |||||||| |||| ||| ||||| | || || ||||| | |||||||||| |  | ||||||||    
T  8322602 ttgaatgtccgtttagaattgtttcaaattcatagcaaggtacattcacgtgacgactggaatgaga-aaatgtcgtgaccagcccaactgactttagga 8322700  T
Q  251 ggtacatacgtgtatcttggaa 272  Q
    ||| ||||||||||||||||||    
T  8322701 ggtgcatacgtgtatcttggaa 8322722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 17695705 - 17695745
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  17695705 cttgaggacaaggaatggtttaagtttggggttgtgatgac 17695745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 622
Target Start/End: Original strand, 6091920 - 6091989
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 622  Q
    ||||||||||||||  ||||| ||| ||||||||| || |||||||||||  || |||||||||| ||||    
T  6091920 tgatggacgaaattgacaagtgcattaaatcgtaaaaaataataaagtagaaagtttatcgttctccaca 6091989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 11126639 - 11126599
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    ||||||||| ||||| |||| ||||||||||||||||||||    
T  11126639 cttgaggactagaaatggttcaagtttggggttgtgatgac 11126599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 7e-63; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 151 - 530
Target Start/End: Original strand, 24841367 - 24841754
Alignment:
Q  151 cttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggctttagg 249  Q
    ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| ||||||||||||||| |  |||||||    
T  24841367 cttgaatgtttgtttagaattgcttcaatctcatagtaaggtccaatcacatgatgactaaagtgtgacaaatcccttgaccagcccca-cttctttagg 24841465  T
Q  250 aggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctg 349  Q
     | |||||| ||||||||||||||| ||| |||||||||||||  |||||||| ||||| || |||  ||||||||||| ||||||  |||| | ||| |    
T  24841466 tgatacatatgtgtatcttggaattgtatgtggttgaaagtaagagtatcttccctaagcttcttctacttgcatggaagtggtaagctagtcaagtcag 24841565  T
Q  350 atggtgggatgagtgacaatctgagcaaaatctgagcagaaggta--ttttcct--------attctaacttcttgctattgtgtttcttgaggacaaga 439  Q
    || ||| || || | ||||||||||| ||||||  |  ||| |||  ||||  |        |||||||||||||| ||||||||||||||||||||||     
T  24841566 atagtgagaagaataacaatctgagc-aaatctccg-ggaatgtatgttttaattaatgtaaattctaacttcttgttattgtgtttcttgaggacaagc 24841663  T
Q  440 aacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    ||| || || || ||||||||||||||| ||||||||||||| |||||| | ||||||||||||||| ||||||| |||| ||||||||||    
T  24841664 aacagtgtacgtatggggttgtgatgacagagcatcatatgacattttttgctatgtttttagtactattctttgcatttgaagacaaata 24841754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 141 - 382
Target Start/End: Complemental strand, 11274871 - 11274630
Alignment:
Q  141 tgatatagaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccat 239  Q
    ||||||| ||||||||||| | ||| |||| |||||||| ||||||||||||| ||||||||||  ||| |||||||||||| |||||||||| |||| |    
T  11274871 tgatatataccttgaatgtttgtttggaatcgcttcaatttcatagtaaggtaaaatcacatgacaactagagtgtgacaaacgccttgaccatccccct 11274772  T
Q  240 cggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatata 339  Q
     ||||||||||| ||| || ||||||||||||||| ||| |||||||||||||  |||||||||| |||| |||||  |||||||| ||   ||||  ||    
T  11274771 -ggctttaggagatacctatgtgtatcttggaattgtatgtggttgaaagtaaaagtatcttctcaaagtctgttctgcttgcatgaaagcagtaagcta 11274673  T
Q  340 gttacgtctgatggtgggatgagtgacaatctgagcaaaatct 382  Q
    |||| |||||||||||| | || ||||||| ||||||||||||    
T  11274672 gttaagtctgatggtggaaagaatgacaatatgagcaaaatct 11274630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 70 - 327
Target Start/End: Original strand, 17027056 - 17027316
Alignment:
Q  70 tactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatgccttcg--gtgtgtatggtgatatagaccttgaatgtctatttag 167  Q
    ||||||||||||| || |||||||||||||||| || || |||||||| |||| |||||    |||||| || ||||| | ||||||| ||||| ||||     
T  17027056 tactttctcaaatgtatcccaccttaacctcaatcatgttataacctttaaaaggccttatatgtgtgtgtgatgataaataccttgagtgtctgtttat 17027155  T
Q  168 aattgcttcaatctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtatc 266  Q
    |||||||| ||| |||||| |||| |||||||||||| ||||| ||| |||||||||| |||| ||||||||   |||||||||||||||||| ||||||    
T  17027156 aattgcttaaatgtcataggaaggaacaatcacatgacgactggagtatgacaaatgcattgatcagccccactagctttaggaggtacatacatgtatc 17027255  T
Q  267 ttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatgga 327  Q
    |||||||| ||  ||||||||| |||  ||||||||||||| | |||||  ||||||||||    
T  17027256 ttggaattgtacgtggttgaaaataagagtatcttctctaactgtgttccgcttgcatgga 17027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 78 - 309
Target Start/End: Original strand, 22754483 - 22754718
Alignment:
Q  78 caaatataccccaccttaacctcaaccacgtgataaccttgaaaatgccttcggtgtgtatgg----tgatatagaccttgaatgtctatttagaattgc 173  Q
    ||||| || ||||||||||||||| |||||| |||||||||||| || | || || ||| ||     |||| || |||||||||| || ||||||||| |    
T  22754483 caaatttatcccaccttaacctcagccacgttataaccttgaaa-tgtcctctgtatgtgtgtgaaatgatgtataccttgaatgcctgtttagaatttc 22754581  T
Q  174 ttcaatctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaa 272  Q
    |||||||| |||| ||||||||||||||||| ||||| |||||| ||||||| ||||||| ||| || | ||||||||||||||||||||||||||||||    
T  22754582 ttcaatcttatagcaaggtacaatcacatgacgactggagtgtggcaaatgctttgaccaaccctattgactttaggaggtacatacgtgtatcttggaa 22754681  T
Q  273 ttttatctggttgaaagtaattgtatcttctctaagt 309  Q
    | |||| |||||||||||||   |||| |||||||||    
T  22754682 tattatatggttgaaagtaagaatatcctctctaagt 22754718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 402 - 545
Target Start/End: Original strand, 17027400 - 17027543
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||||| |||||| |||||| |||||||| ||| || |  |||||||||||||||||| || |||||||||||||| |||||||| ||||||||||    
T  17027400 attctaactttttgctaatgtgttgcttgaggataagcaatgacttaagtttggggttgtgacgagggagcatcatatgacatttttggctatgttttta 17027499  T
Q  502 gtacttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    ||||||||||||| |||||||||||| || ||||||| ||||||    
T  17027500 gtacttttctttgcatttaaagacaattaagatgagagttagag 17027543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 427 - 530
Target Start/End: Complemental strand, 11274547 - 11274445
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagaca 526  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| | ||| ||||||||||||||||||| ||||||||||     
T  11274547 cttgaggacaagcaacggtttaagtttggggttgtgatgaaggagcatcatttgatattttttgctat-tttttagtacttttctttgcatttaaagacc 11274449  T
Q  527 aata 530  Q
    ||||    
T  11274448 aata 11274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24956846 - 24956912
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24956846 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 24956912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24965309 - 24965375
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24965309 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 24965375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1728159 - 1728227
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacagca 69  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1728159 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacagca 1728227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20372913 - 20372979
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20372913 cgactttaaaaatacgaataaaatcggtaagaatagagaaaagtggtcaaaatttggggtatgacag 20372979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20398635 - 20398700
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20398635 cgactttaaaaatacgaataaaatcggtaagaatagagaaaagtggtcaaaatttggggtatgaca 20398700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29186278 - 29186343
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29186278 cgactttaaaaatacgaataaaatgggtaaggatagagaaaagtggtcaaaatttggggtatgaca 29186343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43598046 - 43598111
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43598046 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 43598111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43603538 - 43603603
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43603538 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 43603603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43609030 - 43609095
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43609030 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 43609095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 28852613 - 28852549
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28852613 actttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacag 28852549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 28844003 - 28843940
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28844003 actttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 28843940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23350076 - 23350142
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  23350076 cgactttaaaaatacgaataaaatgggtaaaaatagagaaaaatggtcaaaatttggggtatgacag 23350142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19223620 - 19223555
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19223620 cgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 19223555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31421854 - 31421789
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31421854 cgacttcaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaattttgggtatgaca 31421789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 149 - 382
Target Start/End: Complemental strand, 23125454 - 23125219
Alignment:
Q  149 accttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggcttta 247  Q
    ||||||| ||| | |||||||||| |||||||||| || || ||||||||||||||  ||| ||||||| ||| | ||||||||| |||||    |||||    
T  23125454 accttgagtgtatgtttagaattgtttcaatctcacagcaaagtacaatcacatgacaactggagtgtggcaagttccttgaccaaccccactatcttta 23125355  T
Q  248 ggaggtacatacgtgtatcttggaattttatctggttgaaagtaat-tgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgt 346  Q
     |||||||||| ||||||||||||||| ||  || ||| |||||||  |||||||||||||| |||| |  ||||||||||| ||||||  |||| | ||    
T  23125354 tgaggtacatatgtgtatcttggaattgtaagtgattggaagtaataagtatcttctctaagcttgtcccgcttgcatggaagtggtaagttagtcaagt 23125255  T
Q  347 ctgatggtgggatgagtgacaatctgagcaaaatct 382  Q
    |||   |||||| || ||||||| |||||| |||||    
T  23125254 ctggaagtgggaagaatgacaatatgagcacaatct 23125219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 31410953 - 31410890
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  31410953 actttaaaaatacgaataaaatgggttagaatagagaaatgtggtcaaaatttggggtatgaca 31410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 487
Target Start/End: Original strand, 12029493 - 12029578
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttt 487  Q
    ||||| ||||||| ||||| |||| ||||||||||| |||   ||||||||||||||||||||||| |||||||||||||||||||    
T  12029493 attcttacttctttctattttgttacttgaggacaaaaaatattttaagtttggggttgtgatgaccgagcatcatatgatatttt 12029578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 545
Target Start/End: Complemental strand, 25594875 - 25594791
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    ||||||| |||||||||||  ||||||||| |||||||||||||||||| |||| |||| |||||||||| ||||||| ||||||    
T  25594875 tgatgacagagcatcatatattatttttggctatgtttttagtacttttatttgcatttgaagacaaataagatgagagttagag 25594791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 552
Target Start/End: Complemental strand, 17382210 - 17382127
Alignment:
Q  469 gagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||||||||||||||| | ||||| |||||||||||| |||| |||| |||||||||| ||||||| |||||| ||||||    
T  17382210 gagcatcatatgatattttttgctatgtgtttagtacttttttttgcatttgaagacaaataagatgagagttagaggagttgt 17382127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 138 - 292
Target Start/End: Original strand, 19331160 - 19331315
Alignment:
Q  138 tggtgatatagaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccc 236  Q
    |||||||||  | ||||||||||| | || |||||||||||||||| || |||||| |||||||||| | || ||||||||||||||| || |||| ||     
T  19331160 tggtgatatgtatcttgaatgtctctatataattgcttcaatctcaaagcaaggtagaatcacatgacggctggagtgtgacaaatgctttcaccaacca 19331259  T
Q  237 catcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaa 292  Q
     |  |  ||||||||||||||| |||||| |||||||| ||  |||||||||||||    
T  19331260 tactgattttaggaggtacatatgtgtattttggaattgtaagtggttgaaagtaa 19331315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 30072111 - 30072201
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||||| |||||| || |||||| || |||||||| |||||||||||||| |||| |||||||||| |||||||||||||| ||||||    
T  30072111 tgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattagaggagttgt 30072201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 403 - 539
Target Start/End: Original strand, 22754829 - 22754958
Alignment:
Q  403 ttctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttag 502  Q
    ||||||||| ||||||||||||| |||| |||||||||||  |||||||||||| || | ||||  |||      |||| ||||| || |||||||||||    
T  22754829 ttctaactttttgctattgtgttgcttgtggacaagaaacattttaagtttgggtttcttatgatagag------atgacatttt-ggatatgtttttag 22754921  T
Q  503 tacttttctttgaatttaaagacaaataggatgagaa 539  Q
    ||| |||||||| ||||||||||||||| ||||||||    
T  22754922 tacgtttctttgcatttaaagacaaataagatgagaa 22754958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 535
Target Start/End: Complemental strand, 22968026 - 22967951
Alignment:
Q  460 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatg 535  Q
    |||||||||||| ||||||||||||||| || ||||||||||||| ||||||||| || | |||||||||| ||||    
T  22968026 gtgatgacggagtatcatatgatattttaggctatgtttttagtagttttctttgcatgttaagacaaataagatg 22967951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 552
Target Start/End: Original strand, 24517310 - 24517377
Alignment:
Q  485 ttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||| |||||||||||||| |||| ||||| |||| |||||||||| |||||||||||||| ||||||    
T  24517310 ttttagttatgtttttagttctttgctttgcatttgaagacaaataagatgagaattagaggagttgt 24517377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 552 - 617
Target Start/End: Original strand, 11273683 - 11273748
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    ||||||||| ||||| |||||| ||| |||| |||||||||||||||||||| || ||||||||||    
T  11273683 ttgatggacaaaattggcaagtgcatcaaattgtaacaagtaataaagtagtaagtttatcgttct 11273748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 538
Target Start/End: Original strand, 22229741 - 22229818
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttt-tagtacttttctttgaatttaaagacaaataggatgaga 538  Q
    ||||||| ||||||||||||  ||||| || |||||||| ||||||||||||||| |||| |||||||||| |||||||    
T  22229741 tgatgacagagcatcatatgtcatttt-ggctatgttttttagtacttttctttgcatttgaagacaaataagatgaga 22229818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 41099780 - 41099838
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatg 63  Q
    ||||||| ||||||  ||||| |||| |||||| |||||||||||||||||||||||||    
T  41099780 tttaaaagtacgaacgaaatgtgtaaaaatagataaaagtggtcaaaatttggggtatg 41099838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 402 - 519
Target Start/End: Complemental strand, 22644105 - 22643989
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||| |||||||||| ||| |||| |||||||| ||| |||||||||||||| || |||||||||  ||  | ||||| |||||||| | ||| ||||||    
T  22644105 attccaacttcttgccattttgttgcttgaggataagcaacggtttaagttt-ggtttgtgatgattgaataacatataatatttttaggtatattttta 22644007  T
Q  502 gtacttttctttgaattt 519  Q
    ||  ||||||||| ||||    
T  22644006 gttattttctttgtattt 22643989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 624
Target Start/End: Complemental strand, 17768713 - 17768641
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 624  Q
    ||||||||||||||| ||||||  |  ||||||||| ||||||||||||||| || |||| ||||| ||||||    
T  17768713 ttgatggacgaaattggcaagtaaaccaaatcgtaagaagtaataaagtagtaagtttattgttctccacagg 17768641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 617
Target Start/End: Complemental strand, 19571112 - 19571048
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    |||||||| ||||| |||||| ||  |||||||||||| |||||||||||| || ||||||||||    
T  19571112 tgatggactaaatttgcaagtgcaccaaatcgtaacaaataataaagtagtaagtttatcgttct 19571048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 20860470 - 20860430
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  20860470 cttgaggacaagcaacagtttaagtttggggttgtgatgac 20860430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 34133906 - 34133866
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  34133906 cttgaggacaaggaacggttcaagtttggggttgtgatgac 34133866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 454
Target Start/End: Complemental strand, 11274595 - 11274548
Alignment:
Q  407 aacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttg 454  Q
    |||||||||||| |||||| |||||||||||| ||| |||||||||||    
T  11274595 aacttcttgctactgtgttgcttgaggacaagtaacagtttaagtttg 11274548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 603
Target Start/End: Complemental strand, 24519014 - 24518964
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 603  Q
    |||||||||||| | ||||||  || |||||||||||||||||||||||||    
T  24519014 tgatggacgaaactggcaagtgtatcaaatcgtaacaagtaataaagtagt 24518964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 460 - 530
Target Start/End: Original strand, 24846192 - 24846262
Alignment:
Q  460 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    ||||||||||||||| ||||||| |||| || ||| ||||||||   |||||||| |||| ||||||||||    
T  24846192 gtgatgacggagcatgatatgatgttttaggctatatttttagttactttctttgcatttgaagacaaata 24846262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 537
Target Start/End: Original strand, 15205577 - 15205653
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagta-cttttctttgaatttaaagacaaataggatgag 537  Q
    ||||||| ||||||||||||||| |||||  |||||||||||||  |||| |||| ||||||| ||||||| ||||||    
T  15205577 tgatgacagagcatcatatgata-ttttgactatgtttttagtattttttatttgcatttaaatacaaataagatgag 15205653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 622
Target Start/End: Original strand, 18451061 - 18451130
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 622  Q
    |||||||||||||| ||||||  |  | |||||||||||||||||||| || || |||||||||| ||||    
T  18451061 tgatggacgaaattggcaagtggaccagatcgtaacaagtaataaagttgtaagtttatcgttctccaca 18451130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 21929285 - 21929236
Alignment:
Q  17 aataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||| ||  ||||||| | |||||||||||||||||||||    
T  21929285 aataaaatgggtaaaaagcgagaaaaattgtcaaaatttggggtatgaca 21929236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 22938089 - 22938049
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  22938089 cttgaggacaaggaatggttcaagtttggggttgtgatgac 22938049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 557 - 617
Target Start/End: Complemental strand, 25682207 - 25682147
Alignment:
Q  557 ggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    |||||||||| |||||| ||  |||||||||||||||||||| |||| |  ||||||||||    
T  25682207 ggacgaaattggcaagtgcactaaatcgtaacaagtaataaaatagtaattttatcgttct 25682147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 26070404 - 26070475
Alignment:
Q  458 ttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    |||| |||| ||| ||||||||||| ||||||| ||||||||||||  ||||||||| |||| ||| ||||||    
T  26070404 ttgtaatgatggaacatcatatgat-tttttggctatgtttttagttattttctttgcattttaaggcaaata 26070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 1e-55; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 70 - 378
Target Start/End: Original strand, 21471316 - 21471628
Alignment:
Q  70 tactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatgccttcg---gtgtgtatggtgatatagaccttgaatgtctattta 166  Q
    |||||||  ||||||| || | |||||||| |  ||||| |||||||||||||  |||| |   |||||| || ||||||| || |||||||||||||||    
T  21471316 tactttccaaaatatatcctaacttaaccttagtcacgttataaccttgaaaagtcctttgtatgtgtgtgtgatgatatatacattgaatgtctattta 21471415  T
Q  167 gaattgcttcaatctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtat 265  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| ||| || |||||||||||||||||||||| || ||||||||  |||||| |||||    
T  21471416 gaattgcttcaatctcatagcaaggtacaatcacatgacgactggagtatggcaaatgccttgaccagccccattggatttaggagacacatacatgtat 21471515  T
Q  266 cttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtgggatgagtga 365  Q
    ||||||||| ||  |||||||||||||  ||||| |||||||||||| ||  |||||||| |  ||||||  |||| | || |||| |||||| || |||    
T  21471516 cttggaattgtacgtggttgaaagtaagagtatcctctctaagtttgatccacttgcatgaaggtggtaagctagtcaagtttgatagtgggaggaatga 21471615  T
Q  366 caatctgagcaaa 378  Q
    |||||||||||||    
T  21471616 caatctgagcaaa 21471628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 70 - 309
Target Start/End: Original strand, 5721920 - 5722164
Alignment:
Q  70 tactttctcaaatataccccacctt-aacctcaaccacgtgataaccttgaaaatgcct---tcggtgtgtatggtgatatagaccttgaatgtctattt 165  Q
    |||||||| ||||||| |||||||| ||||| | |||||| |||||||||||||  |||   |  |||||| |||| ||||   ||||||||| ||||||    
T  5721920 tactttctaaaatatatcccacctttaacctaagccacgttataaccttgaaaaaacctctatatgtgtgtctggtaatatgtgccttgaatgcctattt 5722019  T
Q  166 agaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgta 264  Q
    ||||||||||||||||||||| ||| |||||||| ||||  ||| |||||||||||||  |||  ||| |||||  | ||||||||| ||||||||||||    
T  5722020 agaattgcttcaatctcatagcaagatacaatcaaatgactactggagtgtgacaaatttctttcccatccccactgactttaggagatacatacgtgta 5722119  T
Q  265 tcttggaattttatctggttgaaagtaattgtatcttctctaagt 309  Q
    |||||||||| ||  |||||||||| ||  |||||||||||||||    
T  5722120 tcttggaattgtaagtggttgaaagcaagagtatcttctctaagt 5722164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 402 - 538
Target Start/End: Original strand, 7494584 - 7494720
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||| |||||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||  |||||||| ||||||||||||| |||  |||||    
T  7494584 attctgacttcttgctattgtgttgcttgaggacaagcaacagtttaagtttgtggttgtgatgaatgagcatcacatgatatttttggctattctttta 7494683  T
Q  502 gtacttttctttgaatttaaagacaaataggatgaga 538  Q
    ||||||||||||| | || |||||||| ||| |||||    
T  7494684 gtacttttctttgcacttgaagacaaacaggttgaga 7494720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 552
Target Start/End: Complemental strand, 20471049 - 20470902
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaag-aaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 504  Q
    |||||||||||||| ||||| |||||||||||  ||||  |||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||||||    
T  20471049 taacttcttgctatcgtgttgcttgaggacaaacaaacaatttaagtttggggttgtgatgacgaagcatcatatgaattttttggctttgtttttagta 20470950  T
Q  505 cttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||| |||  || | |||||||||| ||||| |||||||| ||||||    
T  20470949 cttttatttatatgtgaagacaaataagatgataattagaggagttgt 20470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12978520 - 12978455
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12978520 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18304392 - 18304457
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18304392 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 18304457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 406 - 545
Target Start/End: Original strand, 21471674 - 21471813
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 505  Q
    |||||||| |||||||| || |||||||||||  ||| |||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  21471674 taacttctagctattgtattgcttgaggacaatcaacagtttaagtttggggttgtgatgacagagcatcatatgcca-ttttggttatgtttttagtac 21471772  T
Q  506 -ttttctttgaatttaaagacaaataggatgagaattagag 545  Q
     ||||| ||| |||| |||||||||| ||||| | ||||||    
T  21471773 tttttccttgcatttgaagacaaataagatgatatttagag 21471813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 4941581 - 4941643
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4941581 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 4941643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10440002 - 10439936
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10440002 cgactttaaaaatacgaataaaatgggcaagaatagagaaaagtggtcaaaatttggggtatgacag 10439936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4952397 - 4952463
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  4952397 cgactttaaaaatacgaataaaatgggtaagaatagataaaagtggtcaaaatttgaggtatgacag 4952463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13831565 - 13831499
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  13831565 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttagggtatgacag 13831499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13839596 - 13839530
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  13839596 cgactttaaaaatacgaataaaatggataagaatagaggaaagtggtcaaaatttggggtatgacag 13839530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 29544451 - 29544542
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||| ||||||||||||||||||||||| |||||||||| || ||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  29544451 tgatgaaggagcatcatatgatatttttggctatgtttttattaattttctttgcatttgaagacaaataagatgagagttagaggagttgt 29544542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 30244839 - 30244775
Alignment:
Q  2 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  30244839 gactttaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttgaggtatgaca 30244775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 402 - 513
Target Start/End: Complemental strand, 9761646 - 9761537
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||||||||| ||||||||| |  |||||||||||| |||  ||||| ||||||||||||||||| ||||||||||||| | |||||| || |||||||    
T  9761646 attctaacttcatgctattgtctagcttgaggacaagcaacaatttaa-tttggggttgtgatgacagagcatcatatgaca-ttttggctacgttttta 9761549  T
Q  502 gtacttttcttt 513  Q
    ||||||||||||    
T  9761548 gtacttttcttt 9761537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 3269220 - 3269123
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagt 503  Q
    |||||||||| |||| |||| |  |||||||| |||||||||||||||| |||||||||||| |||| |||||||||| ||| || ||||||||||||    
T  3269220 taacttcttgttattttgttgcgagaggacaataaacggtttaagtttgaggttgtgatgaccgagcttcatatgatactttaggctatgtttttagt 3269123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 7955796 - 7955920
Alignment:
Q  151 cttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggctttagg 249  Q
    ||||| ||||| ||| ||||||||| | |||||||  |||||||||||||||||||||| ||||| | ||||||||||||  |||||  | |  ||||||    
T  7955796 cttgagtgtctgtttggaattgctttagtctcataacaaggtacaatcacatgatgactggagtggggcaaatgccttgagaagccctgttgaatttagg 7955895  T
Q  250 aggtacatacgtgtatcttggaatt 274  Q
    ||||||| |||||||||||||||||    
T  7955896 aggtacacacgtgtatcttggaatt 7955920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 461 - 557
Target Start/End: Complemental strand, 2632619 - 2632523
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgagaattagagtagttgttgatg 557  Q
    ||||||| ||| ||| ||||||||||||| |||||||| |||||||||| ||||| |||||||||| ||||| |||||| |||||| |||||||||||    
T  2632619 tgatgacagagtatcgtatgatatttttg-ttatgtttatagtactttttctttgcatttaaagactaatagtatgagagttagaggagttgttgatg 2632523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 461 - 530
Target Start/End: Original strand, 7142030 - 7142099
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    ||||||| ||||||||||||| |||||||| |||||||||| || ||||||||| |||||||||||||||    
T  7142030 tgatgacagagcatcatatgacatttttggctatgtttttaatagttttctttgcatttaaagacaaata 7142099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 21663030 - 21663089
Alignment:
Q  8 aaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||    
T  21663030 aaaaatacgaataaaatgggtaaaaacagataaaagtgatcaaaatttggggtatgacag 21663089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 30245626 - 30245568
Alignment:
Q  8 aaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||    
T  30245626 aaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaaatttgggtatgaca 30245568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 30255470 - 30255420
Alignment:
Q  8 aaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggg 58  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  30255470 aaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttggg 30255420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 513
Target Start/End: Complemental strand, 9802057 - 9801996
Alignment:
Q  451 tttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 513  Q
    ||||||||||||||||| ||||||||||||| | |||||| || |||||||||||||||||||    
T  9802057 tttggggttgtgatgacagagcatcatatgaca-ttttggctacgtttttagtacttttcttt 9801996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 552 - 622
Target Start/End: Original strand, 21544679 - 21544749
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 622  Q
    ||||||||||||||| |||||| ||  ||||||||||||||||||||||||| || ||| |||||| ||||    
T  21544679 ttgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtttaccgttctccaca 21544749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 2353421 - 2353357
Alignment:
Q  463 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaa 527  Q
    ||||||||||||| ||||||||||| || ||||||||||||  ||||||||| |||| |||||||    
T  2353421 atgacggagcatcgtatgatattttaggctatgtttttagttgttttctttgcatttgaagacaa 2353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 20446171 - 20446262
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||| ||||| ||||||||||||| | | ||||||||| ||||||| ||||| |||| ||||||| || |||||||||||||| ||||||    
T  20446171 tgatgacagagcaacatatgatattttagct-atgtttttaatactttttctttgcatttgaagacaattaagatgagaattagaggagttgt 20446262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 23124833 - 23124924
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgtt 553  Q
    |||||| |||||||||| ||| ||||||   |||||||||||||| |||||||  |||| |||||||||| ||||||| |||||| |||||||    
T  23124833 tgatgatggagcatcatctgacattttttactatgtttttagtac-tttctttacatttgaagacaaataagatgagatttagaggagttgtt 23124924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 624
Target Start/End: Complemental strand, 7494555 - 7494484
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 624  Q
    |||||||||||||| |||||| ||  |||||||||||||||||||| |||| || ||||| |||| ||||||    
T  7494555 tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaattagtaagtttatcattctccacagg 7494484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 529
Target Start/End: Complemental strand, 16536811 - 16536689
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 505  Q
    |||||||||  |||| |||| |||||||||||  |||  |||||||||  ||||||||||| ||| |||||| |||||||||  |||||| |||| ||      
T  16536811 taacttctttttattttgttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatctgatattttaagttatg-ttttggtta 16536713  T
Q  506 ttttctttgaatttaaagacaaat 529  Q
    ||||||||| |||| |||||||||    
T  16536712 ttttctttgcatttgaagacaaat 16536689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 529
Target Start/End: Complemental strand, 16577513 - 16577387
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||||||||  |||| | || |||||||||||  |||  |||||||||  ||||||||||| ||| ||||||||||||||||  | ||||||||      
T  16577513 attctaacttctttttatttttttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatatgatattttaaggtatgttttgg 16577414  T
Q  502 gtacttttctttgaatttaaagacaaat 529  Q
     || ||||||||| |||| |||||||||    
T  16577413 cta-ttttctttgcatttgaagacaaat 16577387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 529
Target Start/End: Original strand, 16588149 - 16588275
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||||||||  |||| | || |||||||||||  |||  |||||||||  ||||||||||| ||| ||||||||||||||||  | ||||||||      
T  16588149 attctaacttctttttatttttttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatatgatattttaaggtatgttttgg 16588248  T
Q  502 gtacttttctttgaatttaaagacaaat 529  Q
     || ||||||||| |||| |||||||||    
T  16588249 cta-ttttctttgcatttgaagacaaat 16588275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 529
Target Start/End: Original strand, 16628851 - 16628973
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 505  Q
    |||||||||  |||| |||| |||||||||||  |||  |||||||||  ||||||||||| ||| |||||| |||||||||  |||||| |||| ||      
T  16628851 taacttctttttattttgttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatctgatattttaagttatg-ttttggtta 16628949  T
Q  506 ttttctttgaatttaaagacaaat 529  Q
    ||||||||| |||| |||||||||    
T  16628950 ttttctttgcatttgaagacaaat 16628973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 484
Target Start/End: Original strand, 1074341 - 1074422
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatat 484  Q
    |||||| |||||||||||| ||||  ||| ||||||| |||| ||||||||| |||||||||||| | ||||| |||||||||    
T  1074341 attctaccttcttgctattttgttgtttggggacaagcaacgatttaagtttagggttgtgatgatgtagcat-atatgatat 1074422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 155 - 307
Target Start/End: Original strand, 1074076 - 1074229
Alignment:
Q  155 aatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggctttaggaggt 253  Q
    ||||||| |||  ||||||||||||||||||  ||||||||||||||||| | || |||||||  |||||||| ||||   | ||| | |||||||||||    
T  1074076 aatgtctgtttgaaattgcttcaatctcataacaaggtacaatcacatgacgtctggagtgtggaaaatgcctagacctttcacattgactttaggaggt 1074175  T
Q  254 acatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaa 307  Q
    ||||| |||  ||||| ||||  |  || ||||||||||  |||| ||||||||    
T  1074176 acatatgtgcgtcttgtaattggaagtgattgaaagtaagagtatattctctaa 1074229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 7956058 - 7956119
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtga 463  Q
    |||||| | ||||| |||| |||| ||| ||||||||||||| |||||||||||||||||||    
T  7956058 attctaccgtcttgatattttgttgcttcaggacaagaaacgatttaagtttggggttgtga 7956119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 519
Target Start/End: Original strand, 18496498 - 18496555
Alignment:
Q  462 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaattt 519  Q
    ||||| |||||| ||||||||||||| || ||||||||||||| ||||||||| ||||    
T  18496498 gatgatggagcaccatatgatattttaggctatgtttttagtagttttctttgcattt 18496555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 513
Target Start/End: Complemental strand, 21545984 - 21545929
Alignment:
Q  461 tgatgacggagcat---catatgatatttttggttatgtttttagtacttttcttt 513  Q
    ||||||||||||||   |||||||||||||||  ||||||||||||||||||||||    
T  21545984 tgatgacggagcatgatcatatgatatttttgactatgtttttagtacttttcttt 21545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 620
Target Start/End: Complemental strand, 7143639 - 7143571
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttca 620  Q
    |||||||| ||||||  ||||| ||  ||||||||||||||||||||||||  || |||||||||||||    
T  7143639 ttgatggatgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagcaagtttatcgttcttca 7143571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 624
Target Start/End: Original strand, 7776350 - 7776422
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 624  Q
    |||||| || |||||||||||| ||  ||||| |||||||||| |||||||| || |||||||||| ||||||    
T  7776350 ttgatgaacaaaattagcaagtgcaccaaatcttaacaagtaacaaagtagtaagtttatcgttctccacagg 7776422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 13287676 - 13287716
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  13287676 cttgaggacaagaaacagtctaagtttggggttgtgatgac 13287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 26137074 - 26137034
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  26137074 cttgaggacaaggaacggttcaagtttggggttgtgatgac 26137034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 617
Target Start/End: Complemental strand, 9071451 - 9071392
Alignment:
Q  558 gacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    |||||||||||||| | ||| |||||||||||||||| |||||||| || || |||||||    
T  9071451 gacgaaattagcaactgcatcaaatcgtaacaagtaaaaaagtagtaagtttttcgttct 9071392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 624
Target Start/End: Original strand, 18494555 - 18494626
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 624  Q
    |||| ||||||||| |||||| ||  ||||||||||||||||||| ||||| || |||| ||||| ||||||    
T  18494555 tgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaggtagtaagtttattgttctccacagg 18494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 548 - 603
Target Start/End: Complemental strand, 21473094 - 21473039
Alignment:
Q  548 gttgttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 603  Q
    |||||||||||||||||||| ||||| ||  ||||| |||||||| ||||||||||    
T  21473094 gttgttgatggacgaaattatcaagtgcaccaaatcataacaagttataaagtagt 21473039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 538
Target Start/End: Original strand, 7815267 - 7815332
Alignment:
Q  473 atcatatgatatttttggttatgtttttagtacttttct-ttgaatttaaagacaaataggatgaga 538  Q
    ||||||||||||||| ||||||||||||||||||||| | ||| |||| |||| ||||| |||||||    
T  7815267 atcatatgatatttt-ggttatgtttttagtacttttttgttgcatttgaagataaataagatgaga 7815332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 22532830 - 22532784
Alignment:
Q  457 gttgtgatgacggagcatcatatgatatttttggttatgtttttagt 503  Q
    ||||| |||| |||||||||||||||||||| || ||||||||||||    
T  22532830 gttgtaatgatggagcatcatatgatattttaggctatgtttttagt 22532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 620
Target Start/End: Complemental strand, 7152157 - 7152116
Alignment:
Q  579 aaatcgtaacaagtaataaagtagtcagattatcgttcttca 620  Q
    ||||||||||||||||||||||||| || |||||||| ||||    
T  7152157 aaatcgtaacaagtaataaagtagtaagtttatcgtttttca 7152116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 614
Target Start/End: Complemental strand, 14074547 - 14074486
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 614  Q
    |||||||||||| | | |||| ||  ||||||||||||||||||||||||| || |||||||    
T  14074547 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcgt 14074486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 553 - 614
Target Start/End: Complemental strand, 14384575 - 14384514
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 614  Q
    |||||||||||| | | |||| ||  ||||||||||||||||||||||||| || |||||||    
T  14384575 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcgt 14384514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 2506786 - 2506826
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  2506786 cttgaggacaagcaactatttaagtttggggttgtgatgac 2506826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 4596958 - 4596918
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  4596958 cttgaggacaaggaatggttcaagtttggggttgtgatgac 4596918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 15170730 - 15170770
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||| ||||| ||||||||||||||||||    
T  15170730 cttgaggacaagcaacagtttatgtttggggttgtgatgac 15170770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 16166702 - 16166754
Alignment:
Q  150 ccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacat 202  Q
    |||||||||||| |||||||||| |||||| | ||| || |||||||||||||    
T  16166702 ccttgaatgtctgtttagaattgtttcaattttataatatggtacaatcacat 16166754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 19154949 - 19154909
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  19154949 cttgaggacaagcaacagattaagtttggggttgtgatgac 19154909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 20754348 - 20754308
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  20754348 cttgaggacaagcaacagattaagtttggggttgtgatgac 20754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 39270239 - 39270279
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  39270239 cttgaggacaagcaacaatttaagtttggggttgtgatgac 39270279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 6e-51; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 70 - 382
Target Start/End: Complemental strand, 16052873 - 16052557
Alignment:
Q  70 tactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatgcct---tcggtgtgtatggtgatatagaccttgaatgtctattta 166  Q
    |||||||| || |||| | ||||||| |||||  ||||| ||||||||||||| ||||   |   ||||| || |||||||   ||||||||||| |||     
T  16052873 tactttctaaactatatctcaccttatcctcagtcacgttataaccttgaaaaggcctctatttatgtgtgtgatgatatatttcttgaatgtctgtttc 16052774  T
Q  167 gaattgcttcaatctcatagtaaggtacaatcacatgatgactga-gtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtat 265  Q
    |||||||||||||||||||| ||||||||||||||||| || ||| ||||| ||||||||||||||| |||||   ||||||||||||||||||| ||||    
T  16052773 gaattgcttcaatctcatagcaaggtacaatcacatgacgattgaagtgtggcaaatgccttgaccaaccccactagctttaggaggtacatacgcgtat 16052674  T
Q  266 cttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtgggatgagtga 365  Q
    ||||||||| ||| |||||||||||||   |||  ||| ||||| |||||| ||||||| ||| ||||||  |||||| || ||||| ||||| |||||     
T  16052673 cttggaattgtatgtggttgaaagtaagaatatactctttaagtctgttcagcttgcatagaagtggtaagctagttaagtttgatgatgggaagagtgg 16052574  T
Q  366 caatctgagcaaaatct 382  Q
    |||||||||| ||||||    
T  16052573 caatctgagccaaatct 16052557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 131 - 315
Target Start/End: Complemental strand, 28901869 - 28901685
Alignment:
Q  131 gtgtgtatggtgatatagaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgactga-gtgtgacaaatgccttga 229  Q
    |||||| || ||||||| ||||| || ||||||||||||| ||||||||||| ||| ||| ||||||||||||| |||  | | ||||||||| ||||||    
T  28901869 gtgtgtgtgatgatatataccttaaaagtctatttagaat-gcttcaatctcgtagcaagatacaatcacatgacgacaaacgagtgacaaattccttga 28901771  T
Q  230 ccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttc 315  Q
    ||| |||||  || |||||||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||||| ||||||    
T  28901770 ccaaccccaatggttttaggagatacatacgtgtatcttggaattgtatgtggttgaaagtaagagtatcttctctaagcttgttc 28901685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 405 - 552
Target Start/End: Original strand, 24120107 - 24120254
Alignment:
Q  405 ctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 504  Q
    ||||||| |||||||||||||  ||||||||||| |||  ||||  || ||||||||||||||| | ||||||||||||||||| | |||||||||||||    
T  24120107 ctaacttattgctattgtgttgattgaggacaagcaacattttattttgggggttgtgatgacgaatcatcatatgatattttttgctatgtttttagta 24120206  T
Q  505 cttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||||| |||| |||| ||||| ||||||| |||||| ||||||    
T  24120207 cttttctttgcatttgaagagaaataagatgagagttagaggagttgt 24120254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 402 - 552
Target Start/End: Complemental strand, 16052519 - 16052369
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||||||||||||||||| | |   |||||||   |  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16052519 attctaacttcttgctattgtgctgcaaaaggacaaacgagagtttaagtttagggttgtgatgacggagcatcatatgatatttttggctatgttttta 16052420  T
Q  502 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||| |||| |||| | ||||||||  |||||| |||||| ||||||    
T  16052419 gtacttttatttgcatttgaggacaaataaaatgagagttagaggagttgt 16052369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 410 - 530
Target Start/End: Complemental strand, 22894768 - 22894648
Alignment:
Q  410 ttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtactttt 509  Q
    |||||||||||||||||||||||||||||  || ||||||||||| | |||||||||| ||||||||||||| |||||| | ||||||||||||||||||    
T  22894768 ttcttgctattgtgtttcttgaggacaagggacagtttaagtttgagattgtgatgacagagcatcatatgacatttttaggtatgtttttagtactttt 22894669  T
Q  510 ctttgaatttaaagacaaata 530  Q
    ||| | |||| ||| ||||||    
T  22894668 cttcgcatttgaagccaaata 22894648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17973630 - 17973565
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17973630 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 289
Target Start/End: Complemental strand, 22895054 - 22894905
Alignment:
Q  141 tgatatagaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccagccccat 239  Q
    ||||||| ||| ||||||||| |||||||| ||||||||||||||| |||||||||||| | ||  |||| |||||| ||||||||||||| |||| ||     
T  22895054 tgatatataccctgaatgtctgtttagaatggcttcaatctcatagaaaggtacaatcatacgacaactggagtgtggcaaatgccttgactagcctcac 22894955  T
Q  240 cggctttaggaggtacatacgtgtatcttggaattttatctggttgaaag 289  Q
      |||||||||| ||||||||||| |||||||||| ||| ||||||||||    
T  22894954 tagctttaggagatacatacgtgtgtcttggaattgtatgtggttgaaag 22894905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30938347 - 30938282
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30938347 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 30938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39837562 - 39837628
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39837562 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacag 39837628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26876054 - 26876119
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26876054 cgacattaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 26876119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39845605 - 39845670
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39845605 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 39845670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 1407075 - 1407138
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1407075 actttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1407138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26873604 - 26873670
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26873604 cgacattacaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 26873670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 454 - 544
Target Start/End: Complemental strand, 28252571 - 28252481
Alignment:
Q  454 ggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattaga 544  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| || | ||||||||||||||| ||||||| |||||    
T  28252571 ggggttgtgatgaaggagcatcatatgatattttttgttatgtttttaatacttttattcgtatttaaagacaaataagatgagagttaga 28252481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 402 - 552
Target Start/End: Complemental strand, 28901582 - 28901432
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||||||||||||||| |||||| |||||| ||||| |||| |||||||||   ||||||||   |||||||||||||| |||||||| |||| |||||    
T  28901582 attctaacttcttgctactgtgttgcttgagaacaagcaacgatttaagtttctagttgtgatattggagcatcatatgaaatttttggctatgctttta 28901483  T
Q  502 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
     |||||||||||| |||| || ||||||| | |||||  ||||| ||||||    
T  28901482 atacttttctttgcatttgaatacaaataagttgagagatagaggagttgt 28901432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4839782 - 4839847
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  4839782 cgactttaaaaatacgaataaaataggtaagaatagagaaaagcggtcaaaatttggggtatgaca 4839847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25579812 - 25579877
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  25579812 cgactttaaaaatacgaataaaatgggtaagaatagataaaagtggtcaaaatttagggtatgaca 25579877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 402 - 552
Target Start/End: Original strand, 10866861 - 10867011
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||| ||| |||||||| |||  |||||||||||  || ||||||| |||||||||||||||| ||| ||||||||||||||||| | |||| |||||    
T  10866861 attctatctttttgctattttgtagcttgaggacaaacaaaggtttaattttggggttgtgatgatggaacatcatatgatattttttggtatgatttta 10866960  T
Q  502 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||  |||||||||||||  ||| |||||| || |  | |||||||||||||    
T  10866961 gttattttctttgaattcgaaggcaaataagaggtcatttagagtagttgt 10867011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17664640 - 17664706
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  17664640 cgactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgacag 17664706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 552
Target Start/End: Complemental strand, 13082137 - 13082029
Alignment:
Q  444 gtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaatta 542  Q
    ||||||||||||||||||||||||  | |||||||||| | ||||| ||||||||||||||| ||||||||| |||| |||||||||| ||||||| |||    
T  13082137 gtttaagtttggggttgtgatgacaaaacatcatatgaca-ttttgattatgtttttagtactttttctttgcatttgaagacaaataagatgagagtta 13082039  T
Q  543 gagtagttgt 552  Q
    ||| ||||||    
T  13082038 gaggagttgt 13082029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17683796 - 17683861
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17683796 cgactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17683861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 241 - 382
Target Start/End: Original strand, 24119925 - 24120066
Alignment:
Q  241 ggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatag 340  Q
    |||||| | ||||||||||||||||||||||||| ||| | ||| |||||||  ||||||||||| ||| |||||  ||||||||||| ||||||  |||    
T  24119925 ggctttggcaggtacatacgtgtatcttggaattatatgtcgtttaaagtaagagtatcttctcttagtctgttctgcttgcatggaagtggtaagctag 24120024  T
Q  341 ttacgtctgatggtgggatgagtgacaatctgagcaaaatct 382  Q
    |||   ||| |||||| | |||||||||||||||| ||||||    
T  24120025 ttaaacctgttggtggaaagagtgacaatctgagccaaatct 24120066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 148 - 335
Target Start/End: Original strand, 12755799 - 12755987
Alignment:
Q  148 gaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgactgag-tgtgacaaatgccttgaccagccccatcggcttt 246  Q
    |||||||||||||| ||||||||| ||| ||||  |||| ||||||||| || |||| || |||  |||||||||||  ||||||| | |||   |||||    
T  12755799 gaccttgaatgtctgtttagaattcctttaatcctatagcaaggtacaaccatatgacgaatgaaatgtgacaaatgttttgaccaactccactagcttt 12755898  T
Q  247 aggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaa 335  Q
    | ||| |||||| || |||||||||||| || | ||||||||||||  ||||||||||||||  ||| |  ||||||||||| ||||||    
T  12755899 atgagatacatatgtatatcttggaattgtaaccggttgaaagtaagagtatcttctctaagaatgtcccacttgcatggaagtggtaa 12755987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 5570386 - 5570305
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttt 487  Q
    |||||||||  |||||||||  ||||| ||||| |||  |||||||||||||||||||| ||||||||||||||||||||||    
T  5570386 taacttcttattattgtgttgtttgagtacaagcaacaatttaagtttggggttgtgataacggagcatcatatgatatttt 5570305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 471 - 552
Target Start/End: Original strand, 12956431 - 12956512
Alignment:
Q  471 gcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||| |||||||||||  ||||||||||||||||||||||| |||| |||| ||||| ||||||| |||||| ||||||    
T  12956431 gcatcatgtgatatttttgtctatgtttttagtacttttctttgcatttgaagataaataagatgagagttagaggagttgt 12956512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 471 - 552
Target Start/End: Complemental strand, 14977280 - 14977199
Alignment:
Q  471 gcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||||||||||||||   ||||||||||| ||||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  14977280 gcatcatatgatatttttaactatgtttttagcacttttctttgcattttaagacaaataagatgagagttagaggagttgt 14977199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 6670772 - 6670710
Alignment:
Q  5 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||    
T  6670772 tttaaaaatacgaataaaatttggtaaaaataga-aaaagtggtcaaaatttggggtatgacag 6670710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 489
Target Start/End: Complemental strand, 28973573 - 28973490
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttg 489  Q
    |||||||||| |||||||||||||   |||||| ||| |||||||||||||||||  |||||  | ||||||||||||||||||    
T  28973573 taacttcttgttattgtgtttcttaccgacaagcaactgtttaagtttggggttgcaatgacaaaacatcatatgatatttttg 28973490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 530
Target Start/End: Complemental strand, 11310379 - 11310318
Alignment:
Q  469 gagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    |||||||||||||||||||| | |||||||||||||||| |||||| |||| |||| |||||    
T  11310379 gagcatcatatgatattttttgctatgtttttagtacttatctttgcatttgaagaaaaata 11310318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 552
Target Start/End: Original strand, 16054225 - 16054317
Alignment:
Q  460 gtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||| ||||||||||||| | |||||| ||||| |||||||| ||||||||| |||| |||||||||| ||| ||| |||||| ||||||    
T  16054225 gtgatgacagagcatcatatgaca-ttttggctatgtctttagtactttttctttgcatttgaagacaaataagataagagttagaggagttgt 16054317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 428 - 513
Target Start/End: Original strand, 29291670 - 29291755
Alignment:
Q  428 ttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 513  Q
    ||||||| ||| |||| |||||||||| |||| |||| ||||| |||||||||||||||| || ||||||||| ||  ||||||||    
T  29291670 ttgaggataagcaacgatttaagtttgaggttatgattacggaacatcatatgatattttaggctatgttttttgttattttcttt 29291755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 32239219 - 32239310
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||| || ||||| |||||||||||||| ||||||||||| ||||||||||  |||| |||| | ||| ||| | |||||||| ||||||    
T  32239219 tgatgatggtgcatcgtatgatatttttggctatgtttttagcacttttctttacatttgaagatagataagataataattagaggagttgt 32239310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 4582265 - 4582203
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||| || ||| |||||| |||| ||||||||||||||||||||||||  ||||||||||    
T  4582265 tttaaaagtatgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttaaggtatgacag 4582203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 558
Target Start/End: Original strand, 6358629 - 6358727
Alignment:
Q  460 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgttgatgg 558  Q
    |||||||| |||||  |||||| ||||| || |||||||||||||||||| |||| |||| |||||| ||| | |||||  ||||| ||||||| ||||    
T  6358629 gtgatgacagagcactatatgacattttgggctatgtttttagtacttttatttgcatttgaagacatataagttgagagatagaggagttgttaatgg 6358727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 552 - 614
Target Start/End: Complemental strand, 12957621 - 12957559
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 614  Q
    |||||||||||||||  ||||| ||  ||||||||||||||||||||||||| || |||||||    
T  12957621 ttgatggacgaaattgacaagtgcactaaatcgtaacaagtaataaagtagtaagcttatcgt 12957559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 5570565 - 5570508
Alignment:
Q  244 tttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatctt 301  Q
    |||||||| || |||||||||||||| |||| ||| |||||||||||||| |||||||    
T  5570565 tttaggagatatatacgtgtatcttgaaattgtatgtggttgaaagtaatagtatctt 5570508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 552 - 617
Target Start/End: Complemental strand, 32240511 - 32240446
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    ||||||||| ||||| |||||| ||  |||| |||||||||||||||||||| || ||||||||||    
T  32240511 ttgatggacaaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaagtttatcgttct 32240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 552
Target Start/End: Complemental strand, 29047499 - 29047408
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||| |||||||||||||||  ||||| ||| || ||||||| ||||||||| |||| || ||||||| ||||||| |||||| ||||||    
T  29047499 tgatgacagagcatcatatgata-atttggctatattattagtactttttctttgcatttgaaaacaaataagatgagagttagaggagttgt 29047408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 617
Target Start/End: Complemental strand, 13305721 - 13305658
Alignment:
Q  554 gatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    ||||||||||||| |||||| |   |||| |||||||||||||||||||| || ||||||||||    
T  13305721 gatggacgaaattggcaagtgcgcaaaattgtaacaagtaataaagtagttagtttatcgttct 13305658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 552 - 603
Target Start/End: Original strand, 13803096 - 13803147
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 603  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||| ||||    
T  13803096 ttgatggacgaaattgacaagtgcatcaaatcgtaacaagtaataaaatagt 13803147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 6663099 - 6663042
Alignment:
Q  9 aaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||  ||||| |||||| ||||||||| ||||||||||||||||||    
T  6663099 aaaatacgaataaaatttggtaaaaataga-aaaagtggttaaaatttggggtatgaca 6663042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 6743501 - 6743444
Alignment:
Q  9 aaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||  ||||| |||||| ||||||||| ||||||||||||||||||    
T  6743501 aaaatacgaataaaatttggtaaaaataga-aaaagtggttaaaatttggggtatgaca 6743444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 28292525 - 28292459
Alignment:
Q  243 ctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagt 309  Q
    |||||||||||| ||||||||||||| ||||| ||  ||||||||| |||  ||||||||| |||||    
T  28292525 ctttaggaggtagatacgtgtatctttgaattataagtggttgaaattaagagtatcttctttaagt 28292459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 30851284 - 30851230
Alignment:
Q  459 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 513  Q
    |||||||| ||| | ||||||||||||||||| ||||||||||||  ||||||||    
T  30851284 tgtgatgatggaacgtcatatgatatttttggctatgtttttagttattttcttt 30851230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 467
Target Start/End: Original strand, 26829427 - 26829472
Alignment:
Q  422 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||| |||||||||||||||| || ||||||||||||||| |||||    
T  26829427 tgttacttgaggacaagaaacagtctaagtttggggttgtaatgac 26829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 624
Target Start/End: Complemental strand, 26853646 - 26853601
Alignment:
Q  579 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 624  Q
    ||||||||||||||||||||||||| || | |||||||| ||||||    
T  26853646 aaatcgtaacaagtaataaagtagtaagttcatcgttctccacagg 26853601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 17099875 - 17099990
Alignment:
Q  151 cttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccagccccatcggctttagg 249  Q
    ||||| ||||| |||||||||| |||||  | |||| |||||||| |||  ||| ||||| |||| ||||||||   |||||||||| |  |||||||||    
T  17099875 cttgattgtctgtttagaattgtttcaaatttatagcaaggtacattcatgtgacgactggagtg-gacaaatggtgtgaccagccctactggctttagg 17099973  T
Q  250 aggtacatacgtgtatc 266  Q
    || ||||||||||||||    
T  17099974 agatacatacgtgtatc 17099990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 25180687 - 25180727
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  25180687 cttgaggataagaaactatttaagtttggggttgtgatgac 25180727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 29765357 - 29765397
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  29765357 cttgaggacaagcaacaatttaagtttggggttgtgatgac 29765397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 529
Target Start/End: Original strand, 30543711 - 30543763
Alignment:
Q  477 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaat 529  Q
    |||||||||||| | ||||||||||||| |||| |||| |||| |||||||||    
T  30543711 tatgatatttttagctatgtttttagtatttttttttgcatttgaagacaaat 30543763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 33878272 - 33878232
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  33878272 cttgaggacaaggaatggttcaagtttggggttgtgatgac 33878232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 402 - 552
Target Start/End: Original strand, 23223284 - 23223434
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||||||||||| |||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  23223284 attctaacttctttctattgtgttgcttaaggacaagaaacaatttaagtttggggttgtgatgacggagcatcatatgatgtttttggctatgttttaa 23223383  T
Q  502 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||||||||| ||||  |||||| || |||| || |||||| ||||||    
T  23223384 gtacttttctttgcattttgagacaattaagatgggagttagaggagttgt 23223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 538
Target Start/End: Complemental strand, 21452057 - 21451921
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||  |||||||||||| | |||||| ||||||||||    
T  21452057 attctaacttcttgctattgtgtttcttgaggacaagtaatagtttaagtttggggttgtgatgacatagcatcatatgaca-ttttggctatgttttta 21451959  T
Q  502 gtac-ttttctttgaatttaaagacaaataggatgaga 538  Q
    |||| ||||||||| |||| |||||||||| |||||||    
T  21451958 gtacgttttctttgcatttgaagacaaataagatgaga 21451921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31548588 - 31548522
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31548588 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 31548522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31540019 - 31539954
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31540019 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31539954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 552
Target Start/End: Original strand, 30675360 - 30675507
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 505  Q
    |||||||||||||| || || |||||||||||| ||| ||||||||| || ||||||||||| ||||||||||||| |||||| | ||||||||||| ||    
T  30675360 taacttcttgctatagttttgcttgaggacaagcaactgtttaagttcggtgttgtgatgacagagcatcatatgacattttttgctatgtttttagaac 30675459  T
Q  506 ttttc-tttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||| |||  ||||  ||||||||| ||||| |||||||| ||||||    
T  30675460 ttttctttttcatttgtagacaaataagatgaaaattagaggagttgt 30675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 35104066 - 35104129
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35104066 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35104129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3432890 - 3432956
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3432890 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacag 3432956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29221488 - 29221554
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  29221488 cgactttaaaaatacgaataaaatgggtaaaaatagagaaaagtagtcaaaatttggggtatgacag 29221554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 23223131 - 23223220
Alignment:
Q  141 tgatatagaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttga 229  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| || | ||||||| ||||||||||||    
T  23223131 tgatatataccttgaatgtctatttagaattgctttaatctcatagcaaggtacaatcacatgacgattggagtgtggcaaatgccttga 23223220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32137754 - 32137819
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  32137754 cgactttaaaaatacgaataaaatggataagaatagagaaaagtgatcaaaatttggggtaagaca 32137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41746693 - 41746758
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  41746693 cgactttaaaaatatgaataaaatggataagaatagataaaagtggtcaaaatttgggatatgaca 41746758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 15299111 - 15299012
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||||||||||||||||| | || |||||||| ||  |||| ||||| |||| | ||||||||| ||| |||||||||||||||| |||||||||||||    
T  15299111 attctaacttcttgctatttttttgcttgaggagaatcaacgatttaaatttgcgattgtgatgatggaacatcatatgatattttaggttatgttttta 15299012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 44320200 - 44320257
Alignment:
Q  9 aaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  44320200 aaaatacgaataaaatgggtaaaaagcgagaaaagtggtcaaaatttggggtatgaca 44320257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 50047113 - 50047204
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||||||  | |||||||||||||||| |||||||||  |||||||||||| |||| |||||||||| ||||| || ||||| ||||||    
T  50047113 tgatgacggaataccatatgatatttttggctatgtttttgatacttttctttgcatttgaagacaaataagatgaaaagtagaggagttgt 50047204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 538
Target Start/End: Complemental strand, 12424097 - 12424020
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgaga 538  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||| |||| |||||||||| |||||||    
T  12424097 tgatgacagagcatcatatgata-ttttggctatgtttttagtactttttctttgcatttgaagacaaataagatgaga 12424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 21498902 - 21498963
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||| ||||||  ||||| |||| |||||||||||||||||||||||||||||||||||    
T  21498902 tttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 21498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 530
Target Start/End: Original strand, 31313425 - 31313553
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttt-tt 500  Q
    ||||||| ||||||||||| |||| | |||||||||| ||| |||||||||||||||||||| || ||  |||||||||||| ||| ||  |||||| ||    
T  31313425 attctaatttcttgctattttgttgcctgaggacaagcaacagtttaagtttggggttgtgacgatgg-tcatcatatgataatttaggccatgtttctt 31313523  T
Q  501 agtacttttctttgaatttaaagacaaata 530  Q
    |||  ||||||||| |||| ||| ||||||    
T  31313524 agttattttctttgcatttgaaggcaaata 31313553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 473 - 552
Target Start/End: Original strand, 26657420 - 26657499
Alignment:
Q  473 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||||||||||||  |||||||||| |||||||||||| |||| |||||||||| | |||||  ||||| ||||||    
T  26657420 atcatatgatatttttgactatgtttttattacttttctttgcatttgaagacaaatatgttgagagatagaggagttgt 26657499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 553 - 624
Target Start/End: Complemental strand, 50048310 - 50048239
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 624  Q
    |||||||||||||| |||||| ||| ||||  ||||||||||||||||||| || |||||||||| ||||||    
T  50048310 tgatggacgaaattggcaagtgcatcaaattataacaagtaataaagtagtaagtttatcgttctccacagg 50048239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 21452221 - 21452099
Alignment:
Q  256 atacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtg 355  Q
    ||||||||||||| ||||| ||| |||||||||||||  ||||| ||||||| |||| ||  ||||||||||  ||||||  |||| | || |||| |||    
T  21452221 atacgtgtatctttgaattgtatgtggttgaaagtaagagtatcctctctaaatttgatctgcttgcatggaggtggtaacctagtcaagtttgatagtg 21452122  T
Q  356 ggatgagtgacaatctgagcaaa 378  Q
    ||| || ||| ||||||||||||    
T  21452121 ggaggaatgaaaatctgagcaaa 21452099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 11770178 - 11770093
Alignment:
Q  460 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    |||||||  |||||||| ||||||||||||  |||||||||| |||| ||||||| |||| |||| ||||| ||||||| ||||||    
T  11770178 gtgatgatagagcatcacatgatatttttgtctatgtttttaatactattctttgcatttgaagataaataagatgagagttagag 11770093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 545
Target Start/End: Complemental strand, 25730754 - 25730670
Alignment:
Q  461 tgatgacggagcatcatatgatatttttg-gttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    ||||||| ||||||||||||||||||||  | |||||||| |||||||||||||| |||| || ||||||| ||||||| ||||||    
T  25730754 tgatgacagagcatcatatgatatttttttgctatgtttt-agtacttttctttgcatttgaaaacaaataagatgagagttagag 25730670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 25778013 - 25777932
Alignment:
Q  462 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattag 543  Q
    |||||||||| |||||||||||||||| | |||||| ||||| |||||||||| |||| || | ||||| ||||||| ||||    
T  25778013 gatgacggagtatcatatgatattttttgctatgttcttagtgcttttctttgcatttgaaaataaataagatgagagttag 25777932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 12810256 - 12810345
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||| ||||||||  |||||||||   ||||||||||||||||||||||  ||||||||||||||| | |||||  ||||| ||||||    
T  12810256 tgatgacgaagcatcat--gatattttttactatgtttttagtacttttctttatatttaaagacaaataagttgagagatagaggagttgt 12810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 529
Target Start/End: Complemental strand, 34935349 - 34935297
Alignment:
Q  477 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaat 529  Q
    ||||||||||| || ||||||||||||  ||||||||||||||||||||||||    
T  34935349 tatgatattttaggctatgtttttagttattttctttgaatttaaagacaaat 34935297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 526
Target Start/End: Complemental strand, 25266504 - 25266462
Alignment:
Q  484 tttttggttatgtttttagtacttttctttgaatttaaagaca 526  Q
    ||||||||||||||||||||||||||||||| |||| ||||||    
T  25266504 tttttggttatgtttttagtacttttctttgcatttgaagaca 25266462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 382
Target Start/End: Original strand, 30675235 - 30675317
Alignment:
Q  300 ttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtgggatgagtgacaatctgagcaaaatct 382  Q
    |||| |||||||||||   |||||| ||| ||||||  |||||| || ||||||||||| || ||||||||||||||||||||    
T  30675235 ttctataagtttgttccaattgcatagaagtggtaagttagttaagtttgatggtgggaagaatgacaatctgagcaaaatct 30675317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 552 - 622
Target Start/End: Complemental strand, 34522185 - 34522115
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 622  Q
    |||||||| |||||| |||||| ||  |||||||||||||||||||| |||| || |||||||||| ||||    
T  34522185 ttgatggaagaaattggcaagtgcaccaaatcgtaacaagtaataaaatagtaagtttatcgttctccaca 34522115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 545
Target Start/End: Complemental strand, 8247840 - 8247756
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagta-cttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    ||||||| ||||||||||||| | |||||  |||||||||| || |||||||||| |||| |||||||||| ||||||| ||||||    
T  8247840 tgatgacagagcatcatatgaca-ttttgactatgtttttaataccttttctttgcatttgaagacaaataagatgagagttagag 8247756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 422 - 467
Target Start/End: Original strand, 22624837 - 22624882
Alignment:
Q  422 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  22624837 tgttacttgaggacaagcaaccgtttaagtttggggttgtgatgac 22624882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 530
Target Start/End: Complemental strand, 25965545 - 25965488
Alignment:
Q  473 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    |||||||||| |||| |||||||||||||||  ||||||||| | |||||||||||||    
T  25965545 atcatatgatgttttaggttatgtttttagttattttctttgtacttaaagacaaata 25965488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 31313020 - 31313097
Alignment:
Q  150 ccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgcct 226  Q
    |||||| |||||||||||||||| || |||||||||| |||||||||| |||| | || | ||||||| |||||||||    
T  31313020 ccttgattgtctatttagaattggtttaatctcatagcaaggtacaataacatcacgattggagtgtggcaaatgcct 31313097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 21914895 - 21914855
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  21914895 cttgaggacaagtaacggttcaagtttggggttgtgatgac 21914855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 519
Target Start/End: Original strand, 26101987 - 26102047
Alignment:
Q  459 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaattt 519  Q
    |||||||| |||||||||||||||||||| ||  |||||||||||  ||||||||| ||||    
T  26101987 tgtgatgatggagcatcatatgatattttaggcgatgtttttagttattttctttgcattt 26102047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 28457604 - 28457556
Alignment:
Q  17 aataaaatgggtaagaata-gagaaaagtggtcaaaatttggggtatga 64  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||    
T  28457604 aataaaatgggtaaaaaaacgagaaaagtggtcaaaatttggggtatga 28457556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 51058391 - 51058450
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatga 64  Q
    ||||||||||||||||||||||  || ||| | ||||||||| ||||||||||||||||||    
T  51058391 ctttaaaaatacgaataaaatgaata-gaacaaagaaaagtgatcaaaatttggggtatga 51058450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 27754786 - 27754837
Alignment:
Q  151 cttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacat 202  Q
    ||||||| ||| |||||||||| |||||| ||||||||| ||||||||||||    
T  27754786 cttgaatttctgtttagaattgtttcaatatcatagtaacgtacaatcacat 27754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 14397286 - 14397356
Alignment:
Q  178 atctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccagccccatcggcttta 247  Q
    ||||||||| ||||||||||||||||| ||| | |||||| ||||| |||||||||| | ||| |||||||    
T  14397286 atctcatagcaaggtacaatcacatgacgacggtagtgtggcaaataccttgaccagtctcattggcttta 14397356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 617
Target Start/End: Original strand, 17836791 - 17836853
Alignment:
Q  555 atggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    |||||||||||| |||||| ||  ||||| |||||||||| |||||||| || ||||||||||    
T  17836791 atggacgaaattggcaagtgcaccaaatcataacaagtaagaaagtagtaagtttatcgttct 17836853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 20314058 - 20314092
Alignment:
Q  32 aatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||| ||||||||||||||||||||||||||||    
T  20314058 aatagaaaaaagtggtcaaaatttggggtatgaca 20314092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 622
Target Start/End: Complemental strand, 23224697 - 23224619
Alignment:
Q  544 agtagttgttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 622  Q
    |||| ||| |||||| ||||||| |||||| | | ||||||||||||||||||| ||||| || ||||| |||| ||||    
T  23224697 agtaattggtgatgggcgaaattggcaagtgcgtcaaatcgtaacaagtaataaggtagtaagtttatcattctccaca 23224619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 617
Target Start/End: Complemental strand, 30676729 - 30676667
Alignment:
Q  555 atggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    ||||||||| ||  ||||||||  ||||||||||||||||||||||||| |  ||||||||||    
T  30676729 atggacgaacttgacaagttcaccaaatcgtaacaagtaataaagtagtaaatttatcgttct 30676667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 31313161 - 31313107
Alignment:
Q  148 gaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacat 202  Q
    |||||||| ||||||||||||||||||| |||||||||   ||||||||| ||||    
T  31313161 gaccttgattgtctatttagaattgctttaatctcataaccaggtacaataacat 31313107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 52100078 - 52100017
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||| |||||| |||||| |||| || |||||||| |||||||||||| || |||||||    
T  52100078 tttaaaagtacgaacaaaatgtgtaaaaacagagaaaaatggtcaaaatttaggatatgaca 52100017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 21912112 - 21912072
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  21912112 cttgaggacaaataacggttcaagtttggggttgtgatgac 21912072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 617
Target Start/End: Complemental strand, 27682993 - 27682929
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    ||||||||||||||  ||||| ||  ||| ||||||||||||||||||||| || |||| |||||    
T  27682993 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttattgttct 27682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 402 - 545
Target Start/End: Complemental strand, 28278664 - 28278522
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||||||||||||||||||| |||||||||||| |||  ||||||||| ||||||||||||| |||||||||||||||||||| | |||| |||||    
T  28278664 attctaacttcttgctattgtgttgcttgaggacaagcaacactttaagttttgggttgtgatgacagagcatcatatgatattttttgctatg-tttta 28278566  T
Q  502 gtacttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    ||||||||||||| |||| ||| |||||| || |||| ||||||    
T  28278565 gtacttttctttgcatttgaaggcaaataagaagagagttagag 28278522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 460 - 552
Target Start/End: Complemental strand, 21505323 - 21505231
Alignment:
Q  460 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||| ||||||| |||||||||||||    
T  21505323 gtgatgacggagcatcatatgatatttttggctatgtttttagtatttttctttgcatttgaagacaaataagatgagagttagagtagttgt 21505231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15944557 - 15944623
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15944557 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 15944623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35138658 - 35138592
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35138658 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 35138592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35146994 - 35146928
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35146994 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 35146928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41233844 - 41233910
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41233844 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 41233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14582990 - 14582925
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14582990 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 14582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15953072 - 15953137
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15953072 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15953137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17687398 - 17687463
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17687398 cgactttaaaaatatgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17687463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 38168357 - 38168422
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38168357 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggagtatgaca 38168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 406 - 530
Target Start/End: Original strand, 39730324 - 39730448
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 505  Q
    ||||||||||||||| |||| |||||||||||  |||  ||||||||||||||||||||| ||||||||||||| ||||||| || ||||||||||||      
T  39730324 taacttcttgctattttgttgcttgaggacaaataacattttaagtttggggttgtgatggcggagcatcatataatattttaggctatgtttttagtta 39730423  T
Q  506 ttttctttgaatttaaagacaaata 530  Q
    ||||||||  | || ||||||||||    
T  39730424 ttttctttataattgaagacaaata 39730448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 42565931 - 42565995
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42565931 actttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacag 42565995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 42574555 - 42574618
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42574555 actttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20621583 - 20621517
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20621583 cgacttcaaaaacacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 20621517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20372313 - 20372378
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  20372313 cgactttaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 20372378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25483666 - 25483601
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25483666 cgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 25483601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25491272 - 25491207
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25491272 cgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 25491207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 527
Target Start/End: Original strand, 31449830 - 31449955
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||| ||||||||||| | |||| |||||||||||| ||| ||||||||||||||||||||||| |||| ||| |||||||||||  | ||||||||||    
T  31449830 attctgacttcttgctaatttgttacttgaggacaagcaacagtttaagtttggggttgtgatgatggagtatcttatgatattttaagctatgttttta 31449929  T
Q  502 gtacttttctttgaatttaaagacaa 527  Q
    ||  |||| |||| |||| |||||||    
T  31449930 gttattttatttgcatttgaagacaa 31449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 405 - 519
Target Start/End: Complemental strand, 32276752 - 32276638
Alignment:
Q  405 ctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 504  Q
    |||| |||||| |||| |||| | | |||||||||||| ||||||||||||||||||||||| ||| ||||||||| || |||||| ||||||||||||     
T  32276752 ctaagttcttgttattttgttgcgtaaggacaagaaaccgtttaagtttggggttgtgatgaaggaacatcatatggtacttttggatatgtttttagtt 32276653  T
Q  505 cttttctttgaattt 519  Q
     ||||||||| ||||    
T  32276652 attttctttgcattt 32276638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44372770 - 44372705
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  44372770 cgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttggggtatgaca 44372705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44388681 - 44388616
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  44388681 cgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttggggtatgaca 44388616  T

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Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 274
Target Start/End: Original strand, 39730111 - 39730217
Alignment:
Q  168 aattgcttcaatctcatagtaaggtacaatcacatgatgac-tgagtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtatc 266  Q
    |||||| ||||||||||||||| ||||||||||| |||||| |||||||| ||||| |||||||||| | ||  ||||||||||||||||||| ||||||    
T  39730111 aattgcatcaatctcatagtaatgtacaatcacacgatgacttgagtgtggcaaataccttgaccag-ctcactggctttaggaggtacatacatgtatc 39730209  T
Q  267 ttggaatt 274  Q
    ||| ||||    
T  39730210 ttgaaatt 39730217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 22389265 - 22389140
Alignment:
Q  149 accttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgactgagtgtgacaaatgccttgaccagccccatcggctttag 248  Q
    ||||||||||| | |||| |||| ||||||| |||||| |||||||| |||||||| ||||| ||||| ||||| |||||||||||| ||    ||||||    
T  22389265 accttgaatgtttgtttataattacttcaatttcatagcaaggtacagtcacatgacgactgggtgtggcaaataccttgaccagcctcactacctttag 22389166  T
Q  249 gaggtacatacgtgtatcttggaatt 274  Q
    ||||||||  | |||| |||||||||    
T  22389165 gaggtacaatcctgtagcttggaatt 22389140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 24292433 - 24292371
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||| |||||| |||||| |||| |||| |||||||||||||||||||||||||||||||    
T  24292433 tttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgacag 24292371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 24285757 - 24285696
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||| |||||| |||||| |||| |||| ||||||||||||||||||||||||||||||    
T  24285757 tttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 24285696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 530
Target Start/End: Original strand, 32619586 - 32619643
Alignment:
Q  473 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||    
T  32619586 atcatatgatatttttggctatatttttagtacttttctttgcatttgaagacaaata 32619643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 34070608 - 34070669
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||| |||||| |||||| |||| |||||||||||||| ||||||||||||||||||||    
T  34070608 tttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgatcaaaatttggggtatgaca 34070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 42249459 - 42249520
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||| ||||||  ||||| |||| |||||||||||||||||||||||||||||||||||    
T  42249459 tttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 42249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 17415588 - 17415496
Alignment:
Q  243 ctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaa 335  Q
    ||||||||||||||||||||||||||||||||     | |||||||||||  ||||||| |||||||||||||  ||||| ||||| ||||||    
T  17415588 ctttaggaggtacatacgtgtatcttggaattgggaatagttgaaagtaagagtatcttttctaagtttgttccacttgcgtggaagtggtaa 17415496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 378
Target Start/End: Complemental strand, 28278823 - 28278704
Alignment:
Q  258 acgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtggg 357  Q
    ||||||||||||||||| ||| ||||| |||||||  ||||||||||||| ||||||   ||||||||||| ||||||  |||| |  |||||| |||||    
T  28278823 acgtgtatcttggaattctatgtggttaaaagtaagagtatcttctctaactttgtttcgcttgcatggaagtggtaaactagtcaaatctgatagtggg 28278724  T
Q  358 atgagtgacaatctgagcaaa 378  Q
    | || ||||||| ||||||||    
T  28278723 a-gaatgacaatatgagcaaa 28278704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 552 - 624
Target Start/End: Complemental strand, 31000669 - 31000597
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagg 624  Q
    ||||||||||||||| |||||| ||| |||| |||||||||||||||||||| || ||||| |||| ||||||    
T  31000669 ttgatggacgaaatttgcaagtgcatcaaattgtaacaagtaataaagtagtaagtttatcattctccacagg 31000597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 35707735 - 35707826
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||| ||||||||||||| | |||||  |||||||||||||| ||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  35707735 tgatgacagagcatcatatgaca-ttttgactatgtttttagtactttttctttgtatttgaagacaaataagatgagagttagagaagttgt 35707826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 26903337 - 26903396
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatga 64  Q
    ||||||| |||||| |||||| |||| |||||||||||||||||||||||| ||||||||    
T  26903337 tttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttagggtatga 26903396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 27606647 - 27606709
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||| |||||||||||| | ||| ||||||||||||| |||||||||||| ||||||||    
T  27606647 ctttaaaagtacgaataaaattgataaaaatagagaaaagtagtcaaaatttggagtatgaca 27606709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35037921 - 35037884
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagag 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35037921 cgactttaaaaatacgaataaaatgggtaagaatagag 35037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 25473969 - 25474060
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||| ||||||||||||| | |||||| |||||||||||||| |||| |||  |||| |||||||||| ||||||| |||||| ||||||    
T  25473969 tgatgacagagcatcatatgaca-ttttggctatgtttttagtacattttattttcatttgaagacaaataagatgagagttagaggagttgt 25474060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 528
Target Start/End: Complemental strand, 18236485 - 18236418
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 528  Q
    |||||||||||||||||||||||||||  | ||||||||||||  ||||||||| |||| ||| ||||    
T  18236485 tgatgacggagcatcatatgatattttatgctatgtttttagttattttctttgcatttgaaggcaaa 18236418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 552
Target Start/End: Original strand, 1733042 - 1733123
Alignment:
Q  470 agcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||||||| ||||| | ||||||||||||||||||| |||  |||| |||||||||  ||||||| |||||| ||||||    
T  1733042 agcatcatatgacattttag-ttatgtttttagtactttttttttcatttgaagacaaatgagatgagagttagaggagttgt 1733123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 21322814 - 21322875
Alignment:
Q  5 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||  ||||  |||||| ||||||||||||||||||||||||||||    
T  21322814 tttaaaaatacgaataaaatttggtacaaataga-aaaagtggtcaaaatttggggtatgaca 21322875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 500
Target Start/End: Original strand, 29769610 - 29769660
Alignment:
Q  450 gtttggggttgtgatgacggagcatcatatgatatttttggttatgttttt 500  Q
    |||||||||| ||||||||||||||||||| ||||||| || |||||||||    
T  29769610 gtttggggttatgatgacggagcatcatataatattttaggctatgttttt 29769660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 27918224 - 27918127
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttt 499  Q
    ||||||||||||| ||| ||| ||  |||| |||||| |||  ||||||||||||| |||||||| |||  | |||||||||||||| | ||||||||    
T  27918224 attctaacttcttactaatgttttgtttgatgacaagcaacaatttaagtttggggatgtgatgatggaataacatatgatatttttagctatgtttt 27918127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 22388997 - 22388934
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 466  Q
    ||||||||||||||||||| | |||||||| |||||| |||| | ||||||||||||||| ||||    
T  22388997 attctaacttcttgctatttt-tttcttgatgacaagcaacgatataagtttggggttgtaatga 22388934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 20917570 - 20917520
Alignment:
Q  16 gaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||  ||| |||||||||||||||||||||||| | ||||||||    
T  20917570 gaataaaatgaataaaaatagagaaaagtggtcaaaatttagagtatgaca 20917520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 35303799 - 35303737
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||| |||||| |||||||| |||||| |  |||||||| | |||||||||||||||||||||    
T  35303799 cttttaaaataagaataaaaggggtaaaatcagagaaaaatagtcaaaatttggggtatgaca 35303737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 1504352 - 1504312
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  1504352 cttgaggacaaggaatggttcaagtttggggttgtgatgac 1504312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 20379417 - 20379377
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  20379417 cttgaggacaagcaacagtctaagtttggggttgtgatgac 20379377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 25873169 - 25873209
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  25873169 cttgaggacaaggaatggttcaagtttggggttgtgatgac 25873209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 25886157 - 25886197
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  25886157 cttgaggacaagcaacaatttaagtttggggttgtgatgac 25886197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 554 - 622
Target Start/End: Original strand, 28455128 - 28455196
Alignment:
Q  554 gatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 622  Q
    ||||||||||||| |||||| ||  ||||| ||||||||| ||||||||| || |||| ||||| ||||    
T  28455128 gatggacgaaattggcaagtacaccaaatcataacaagtattaaagtagtaagtttatggttctccaca 28455196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 530
Target Start/End: Complemental strand, 31914099 - 31914047
Alignment:
Q  478 atgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    |||| |||||| | ||||||||||||| ||||||||| |||| ||||||||||    
T  31914099 atgacattttttgctatgtttttagtatttttctttgcatttgaagacaaata 31914047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 45456266 - 45456306
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  45456266 cttgaggacaaggaatggttcaagtttggggttgtgatgac 45456306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 536
Target Start/End: Complemental strand, 1676537 - 1676403
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||||||||||||||| |||||| ||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||     
T  1676537 attctaacttcttgctactgtgttgcttgaagacatgcaacagtttaagtttggggttgtgatgacgaagcatcatatgacatttttggttatatttttt 1676438  T
Q  502 gtacttttctttgaatttaaagacaaataggatga 536  Q
    ||||||||||||  |||| |||||||||| |||||    
T  1676437 gtacttttctttacatttgaagacaaataagatga 1676403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 536
Target Start/End: Complemental strand, 1683065 - 1682931
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||||||||||||||| |||||| ||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||     
T  1683065 attctaacttcttgctactgtgttgcttgaagacatgcaacagtttaagtttggggttgtgatgacgaagcatcatatgacatttttggttatatttttt 1682966  T
Q  502 gtacttttctttgaatttaaagacaaataggatga 536  Q
    ||||||||||||  |||| |||||||||| |||||    
T  1682965 gtacttttctttacatttgaagacaaataagatga 1682931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 210 - 334
Target Start/End: Complemental strand, 1697017 - 1696893
Alignment:
Q  210 gagtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagt 309  Q
    ||||||| |||||||||||||||||||||  |||||||| ||||||||| ||||||||||||||| ||| |||||||||||||  ||||| |||||||||    
T  1697017 gagtgtggcaaatgccttgaccagccccactggctttagaaggtacatatgtgtatcttggaattgtatgtggttgaaagtaaaagtatcctctctaagt 1696918  T
Q  310 ttgttcatcttgcatggaaatggta 334  Q
    ||||||  ||||||||||| |||||    
T  1696917 ttgttctgcttgcatggaagtggta 1696893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 52295669 - 52295602
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacagc 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52295669 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacagc 52295602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12996541 - 12996475
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12996541 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 12996475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8094282 - 8094348
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8094282 cgactttaaaaatacaaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 8094348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8103088 - 8103153
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8103088 cgactttaaaaatacaaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 8103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 27343691 - 27343756
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27343691 cgactttaaaaatacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 27343756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4523680 - 4523745
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  4523680 cgactttaaaaatacgaataaaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 4523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21532304 - 21532369
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  21532304 cgactttaaaaatacgaataaaatggataaggatagagaaaagtggtcaaaatttggggtatgaca 21532369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 12428481 - 12428543
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  12428481 ctttaaaaatacgaataaaatgggtagaaatagagaaaagtggtcaaaatttggggtatgaca 12428543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 402 - 538
Target Start/End: Complemental strand, 1696809 - 1696675
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    ||||||||||||||||| |||||| ||||| || ||| ||| ||||||||||| |||||||||||   |||||||||||| |||||||| ||  | ||||    
T  1696809 attctaacttcttgctactgtgttgcttgaagataagcaacagtttaagtttgaggttgtgatgataaagcatcatatgacatttttggcta--tattta 1696712  T
Q  502 gtacttttctttgaatttaaagacaaataggatgaga 538  Q
    |||||||| |||  |||| |||||||||| |||||||    
T  1696711 gtacttttatttacatttgaagacaaataagatgaga 1696675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 10638385 - 10638328
Alignment:
Q  9 aaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10638385 aaaatacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 10638328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 463 - 538
Target Start/End: Original strand, 15192137 - 15192212
Alignment:
Q  463 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 538  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||    
T  15192137 atgacagagcatcatatgacattttttgttatgtttttcgtacttttctttgcatttgaagacaaataagatgaga 15192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 489
Target Start/End: Original strand, 34850752 - 34850839
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttg 489  Q
    |||||||||||||| |||||||||||||| | ||||| ||| |||||| ||||| |||| |||||| || |||||||| |||||||||    
T  34850752 attctaacttcttgttattgtgtttcttgcgaacaagcaacagtttaaatttggagttgcgatgacagaacatcatataatatttttg 34850839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 552
Target Start/End: Complemental strand, 34864458 - 34864383
Alignment:
Q  477 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||||||| ||| | | |||||| ||||||    
T  34864458 tatgatattttttgttatgtttttagtacttttctttgtatttgaagacaaataagataaaagttagaggagttgt 34864383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 528
Target Start/End: Complemental strand, 12111510 - 12111446
Alignment:
Q  464 tgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 528  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||| |||| |||| ||||||||    
T  12111510 tgacagagcatcatatgacattttttgttatgtttttagtacttttatttgcatttgaagacaaa 12111446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 18897921 - 18897992
Alignment:
Q  459 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    ||||||| |||| |||||||||| |||||||| | |||||||| |||||||||||| |||| ||||||||||    
T  18897921 tgtgatggcggatcatcatatgacatttttggctgtgtttttactacttttctttgcatttgaagacaaata 18897992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 5906905 - 5906819
Alignment:
Q  460 gtgatgacggagcatcatatgatat-ttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    ||||||||| | ||||||||||||| |||| | |||||||||||||||||| |||| |||| |||||||| | ||||||| ||||||    
T  5906905 gtgatgacgaaacatcatatgatatatttttgctatgtttttagtacttttatttgcatttgaagacaaacaagatgagagttagag 5906819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 10576371 - 10576437
Alignment:
Q  447 taagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 513  Q
    |||||||||||||||||||| |||| ||||||||||||||| |  ||||||||||||  ||||||||    
T  10576371 taagtttggggttgtgatgatggagtatcatatgatattttagactatgtttttagttattttcttt 10576437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 15787927 - 15787861
Alignment:
Q  138 tggtgatatagaccttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatga 204  Q
    |||| |||||||| || |||||||||||| ||||| ||||||||||||| |||||||||||| ||||    
T  15787927 tggtaatatagactttaaatgtctatttaaaattgattcaatctcatagcaaggtacaatcaaatga 15787861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 623
Target Start/End: Original strand, 47023552 - 47023622
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacag 623  Q
    ||||| |||||||| |||||| ||| ||||||||||||||||||| ||||| || ||||| ||||||||||    
T  47023552 tgatgaacgaaattggcaagtacatcaaatcgtaacaagtaataaggtagtaagtttatctttcttcacag 47023622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 552 - 615
Target Start/End: Complemental strand, 20718004 - 20717941
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgtt 615  Q
    ||||| ||||||||| |||||| ||  ||||||||||||||||||||||||| || ||||||||    
T  20718004 ttgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgtt 20717941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 33188827 - 33188765
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||| ||||||| || ||| |||||| |||||| ||||||||||||||||||||||    
T  33188827 ctttaaaaatacaaataaaaaggataaaaataga-aaaagttgtcaaaatttggggtatgacag 33188765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 523
Target Start/End: Original strand, 9288142 - 9288204
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaag 523  Q
    |||||| |||||| ||||||||||||| || ||||||||||||| ||||||||| || |||||    
T  9288142 tgatgaaggagcaccatatgatattttaggatatgtttttagtagttttctttgcatataaag 9288204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 616
Target Start/End: Original strand, 12840697 - 12840761
Alignment:
Q  552 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttc 616  Q
    ||||||||||||||| |||||| ||   |||||||||||||| ||||||||| || |||||||||    
T  12840697 ttgatggacgaaattggcaagtgcactgaatcgtaacaagtattaaagtagtaagtttatcgttc 12840761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 617
Target Start/End: Complemental strand, 22220009 - 22219945
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    ||||||||||||||  ||||| ||  ||||| ||||||||||||||||||| || ||||||||||    
T  22220009 tgatggacgaaattgacaagtgcactaaatcataacaagtaataaagtagtaagtttatcgttct 22219945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 552
Target Start/End: Complemental strand, 25315414 - 25315323
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgttttt-agtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||| ||||||||||||| ||||| | |||||||||| |||||||||||||  |||| |||| ||||| |||||||  ||||| ||||||    
T  25315414 tgatgaccgagcatcatatgacattttag-ttatgttttttagtacttttctttacatttgaagataaataagatgagagatagaggagttgt 25315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 579 - 622
Target Start/End: Complemental strand, 24580047 - 24580004
Alignment:
Q  579 aaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 622  Q
    ||||||||||||||||||||||||| || |||||||||| ||||    
T  24580047 aaatcgtaacaagtaataaagtagttagtttatcgttctccaca 24580004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 545
Target Start/End: Complemental strand, 25050227 - 25050164
Alignment:
Q  482 tatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    ||||||||| ||||||||||||| |||| |||| |||| |||||||||| ||||| | ||||||    
T  25050227 tatttttggctatgtttttagtatttttatttgtatttgaagacaaataagatgaaagttagag 25050164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 563 - 614
Target Start/End: Complemental strand, 30797754 - 30797703
Alignment:
Q  563 aattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 614  Q
    |||| |||||| ||| ||||||||||||||||||||||||| || |||||||    
T  30797754 aattggcaagtgcatcaaatcgtaacaagtaataaagtagtaagtttatcgt 30797703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 3424381 - 3424331
Alignment:
Q  16 gaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||| |||||| | ||||||||| || ||||||||||||||||||||    
T  3424381 gaataaaaggggtaaaattagagaaaaatgatcaaaatttggggtatgaca 3424331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 469 - 513
Target Start/End: Complemental strand, 10320394 - 10320350
Alignment:
Q  469 gagcatcatatgatatttttggttatgtttttagtacttttcttt 513  Q
    ||||||||||||| |||||| | ||||||||||||| ||||||||    
T  10320394 gagcatcatatgacatttttcgctatgtttttagtaattttcttt 10320350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 17339995 - 17339927
Alignment:
Q  462 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    ||||| |||||||||||||||||||| || |||||||||| |  |||| |||  |||||||| ||||||    
T  17339995 gatgatggagcatcatatgatattttaggctatgtttttaattattttatttacatttaaaggcaaata 17339927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 19826667 - 19826707
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  19826667 cttgaggacaaggaatggttcaagtttggggttgtgatgac 19826707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 70 - 378
Target Start/End: Original strand, 11520659 - 11520971
Alignment:
Q  70 tactttctcaaatataccccaccttaacctcaaccacgtgataaccttgaaaatgcct---tcggtgtgtatggtgatatagaccttgaatgtctattta 166  Q
    |||||||  ||||||| |||||||| |||||| |||||| |||||||||||||  |||   |   ||||| |  ||||||| |||||||||||||  |||    
T  11520659 tactttcctaaatatatcccacctttacctcatccacgttataaccttgaaaagtcctctatgtctgtgtgttatgatatataccttgaatgtctgctta 11520758  T
Q  167 gaattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtat 265  Q
     ||||||||||||||||||| |||||||||||| |||| |||| ||||||| |||||||||||||||| ||||   | ||||| || |||||||||||||    
T  11520759 taattgcttcaatctcatagcaaggtacaatcatatgacgactagagtgtggcaaatgccttgaccagtcccactagatttagaagatacatacgtgtat 11520858  T
Q  266 cttggaattttatctggttgaaagtaattgtatcttctctaagtttgttcatcttgcatggaaatggtaatatagttacgtctgatggtgggatgagtga 365  Q
    ||| ||||| | | |||||||||||||  |||||  |||||||||||  |   ||| |||||  ||||||  |||| | || |||| |||||| || |||    
T  11520859 ctttgaattgtttgtggttgaaagtaagagtatccactctaagtttgaactggttgtatggatgtggtaagctagtcaagtttgatagtgggaggaatga 11520958  T
Q  366 caatctgagcaaa 378  Q
    |||||||||||||    
T  11520959 caatctgagcaaa 11520971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 403 - 551
Target Start/End: Original strand, 21017750 - 21017899
Alignment:
Q  403 ttctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgata-tttttggttatgttttta 501  Q
    ||||||||||||| ||||||||| ||| |||||||| |||| |||||||||| ||||||||| || ||||||||||||||| ||||| ||||||||||||    
T  21017750 ttctaacttcttgttattgtgttgcttaaggacaagcaacgatttaagtttgaggttgtgataacagagcatcatatgatatttttttgttatgttttta 21017849  T
Q  502 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttg 551  Q
    ||| ||||||||| |||| |||| ||||| ||||||| |||||| |||||    
T  21017850 gtatttttctttgcatttgaagaaaaataagatgagagttagaggagttg 21017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 402 - 527
Target Start/End: Original strand, 13911138 - 13911263
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||   ||||||||||    
T  13911138 attctaacttattgctattgtgttactttaggacaagcaacggtttaagtttagggttgtgatgacggagaatcaaatgatatttttttctatgttttta 13911237  T
Q  502 gtacttttctttgaatttaaagacaa 527  Q
    ||| ||||||||| |||| |||||||    
T  13911238 gtaattttctttgtatttgaagacaa 13911263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50824417 - 50824352
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50824417 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 50824352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50851443 - 50851508
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50851443 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 50851508  T

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Target: chr3; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 17628329 - 17628265
Alignment:
Q  2 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17628329 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8154644 - 8154710
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8154644 cgactttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacag 8154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9525434 - 9525500
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9525434 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtgatcaaaatttggggtatgacag 9525500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41006621 - 41006555
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41006621 cgactttaaaaatacgaataaaatgggtaagaatagagaaaaatggtcaaaatttggggtatgacag 41006555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41015401 - 41015335
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41015401 cgactttaaaaatacgaataaaatgggtaagaatagagaaaaatggtcaaaatttggggtatgacag 41015335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 25919647 - 25919564
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattaga 544  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||    
T  25919647 tgatgatggagcatcatatgatatttctggttatgtttttagtacatttctttgaatttgaagacaaataagatgagagttaga 25919564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14538605 - 14538671
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14538605 cgactttaaaaatatgaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgacag 14538671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17933720 - 17933654
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  17933720 cgactttaaaaatacgaataaaatgggtaaaaatagagaaaattggtcaaaatttggggtatgacag 17933654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27341335 - 27341401
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27341335 cgactttaaaaatatgaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgacag 27341401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9555108 - 9555173
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9555108 cgactttaaaaatacgagtaaaatgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 9555173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 2211303 - 2211239
Alignment:
Q  2 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  2211303 gactttaaaaatacgaataaaataggtaagaatagagaaaagtggtcaaaatttagggtatgaca 2211239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 28470218 - 28470282
Alignment:
Q  2 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  28470218 gactttaaaaatacgaataaaatggataaggatagagaaaagtggtcaaaatttggggtatgaca 28470282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 17919261 - 17919198
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  17919261 ctttaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttggggtatgacag 17919198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 8402792 - 8402693
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 501  Q
    |||||| |||| ||| ||| |||| |||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||    
T  8402792 attctatcttcctgcaattttgttgcttgaggaaaagcaacgatttaagtttggggttgtgatgacagagcatcatatgatattttagactatgttttta 8402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 17637035 - 17637126
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||||||||||||||||| |||||||| ||||||| || |||||||||||| | ||||||||||||| ||| ||||| |||| ||||||    
T  17637035 tgatgacggagcatcatatgacatttttggctatgtttatattacttttctttgtaattaaagacaaataagataagaataagaggagttgt 17637126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 151 - 291
Target Start/End: Complemental strand, 5633000 - 5632859
Alignment:
Q  151 cttgaatgtctatttagaattgcttcaatctcatagtaaggtacaatcacatgatgactg-agtgtgacaaatgccttgaccagccccatcggctttagg 249  Q
    ||||||||| | ||||||||||||||||||| || | |||||| ||| |||| | ||||| |||||||||||| ||||||  |   | | || |||||||    
T  5633000 cttgaatgtatgtttagaattgcttcaatctaattgcaaggtataattacattacgactgcagtgtgacaaattccttgattatgtctaccgactttagg 5632901  T
Q  250 aggtacatacgtgtatcttggaattttatctggttgaaagta 291  Q
    ||||||||||||||||||||||||| ||  ||||||||||||    
T  5632900 aggtacatacgtgtatcttggaattgtaagtggttgaaagta 5632859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 16816207 - 16816269
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  16816207 ctttaaaaatacgaataaaatgagtaaaaatagagaaaagtggtcaaaattt-gggtatgacag 16816269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 8197700 - 8197762
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  8197700 tttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgacag 8197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 18039068 - 18039011
Alignment:
Q  9 aaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  18039068 aaaatacgaataaaatgggtaaaaagcgagaaaagtggtcaaaatttggggtatgaca 18039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 5632732 - 5632668
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 466  Q
    ||||||||||||||| ||| |||| |||| ||||||| |||||||||||||||||||||||||||    
T  5632732 attctaacttcttgccattttgttgcttggggacaagcaacggtttaagtttggggttgtgatga 5632668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 21186809 - 21186747
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||| |||||||||||||| ||| || ||| ||||||||||||||||||||||||||||    
T  21186809 ctttaaaagtacgaataaaatggataaaaacagataaaagtggtcaaaatttggggtatgaca 21186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 30480 - 30541
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||| ||| || |||||| |||| |||||||||||||||||||||||||||||||||||    
T  30480 tttaaaagtacaaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 30541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 18349617 - 18349560
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtat 62  Q
    ||||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  18349617 tttaaaagtacgaataaaatgtgtaaaaatagagaaaagttgtcaaaatttggggtat 18349560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 43470556 - 43470615
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatga 64  Q
    |||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||||||    
T  43470556 ctttaaaaatacgaataaaaagggtaaaaataga-aaaagtagtcaaaatttggggtatga 43470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 428 - 479
Target Start/End: Original strand, 11521039 - 11521090
Alignment:
Q  428 ttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatat 479  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  11521039 ttgaggacaagcaacggtttaagtttggcgttgtgatgacagagcatcatat 11521090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 552
Target Start/End: Complemental strand, 33914714 - 33914654
Alignment:
Q  492 tatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 552  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||| ||| || ||||||    
T  33914714 tatgtttttagtacttttctttgcatttcaagacaaataagatgagagttataggagttgt 33914654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 544
Target Start/End: Original strand, 12573231 - 12573305
Alignment:
Q  470 agcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 544  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||| |||  |||||||||| ||||||| |||||    
T  12573231 agcatcatatgacatttt-ggttatgtttttagtactttttctttgcattagaagacaaataagatgagagttaga 12573305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 544
Target Start/End: Original strand, 13549695 - 13549769
Alignment:
Q  470 agcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 544  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||| |||  |||||||||| ||||||| |||||    
T  13549695 agcatcatatgacatttt-ggttatgtttttagtactttttctttgcattagaagacaaataagatgagagttaga 13549769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 530
Target Start/End: Original strand, 16970177 - 16970241
Alignment:
Q  465 gacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    ||||||||| |||||||||||||||  |||||||||||| |||||||||| |||| || |||||||    
T  16970177 gacggagca-catatgatatttttgactatgtttttagtgcttttctttgtatttgaacacaaata 16970241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 538
Target Start/End: Complemental strand, 19219394 - 19219317
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 538  Q
    |||||||| |||||||||||||| |||| | | ||||||||||| |||||||||  ||| |||| ||||| |||||||    
T  19219394 tgatgacgaagcatcatatgatacttttagctgtgtttttagtatttttctttgcttttgaagataaataagatgaga 19219317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 622
Target Start/End: Complemental strand, 10343064 - 10343000
Alignment:
Q  558 gacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcaca 622  Q
    |||||||||||||||| ||  |||||||||| ||||||||| |||| || |||||||||| ||||    
T  10343064 gacgaaattagcaagtgcacaaaatcgtaacgagtaataaaatagtaagtttatcgttctccaca 10343000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 10883984 - 10884024
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  10883984 cttgaggacaaggaacggttcaagtttggggttgtgatgac 10884024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 528
Target Start/End: Original strand, 18065761 - 18065828
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 528  Q
    ||||||||| |||| || ||| |||||||| ||||||||| ||| | ||||||| |||||||||||||    
T  18065761 tgatgacggggcattatgtgacatttttggctatgtttttggtaatattctttgcatttaaagacaaa 18065828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 550
Target Start/End: Complemental strand, 1475463 - 1475374
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagtt 550  Q
    |||||||  |||||||||||| ||||| || |||||||||||||| ||||||||| |||| ||| | |||| ||||||| |||||| ||||    
T  1475463 tgatgacatagcatcatatgacatttt-ggctatgtttttagtactttttctttgcatttgaagtctaataagatgagagttagaggagtt 1475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 31477771 - 31477705
Alignment:
Q  464 tgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    ||||| |||||||  |||||| || || ||||||||||||  ||||||||| |||||||||||||||    
T  31477771 tgacgaagcatcacttgatatattaggatatgtttttagttattttctttgtatttaaagacaaata 31477705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 617
Target Start/End: Original strand, 33913400 - 33913461
Alignment:
Q  556 tggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 617  Q
    ||||||||||| |||||| ||  |||| |||||||||||||||||||| |  ||||||||||    
T  33913400 tggacgaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaaatttatcgttct 33913461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 6958978 - 6959006
Alignment:
Q  39 aaaagtggtcaaaatttggggtatgacag 67  Q
    |||||||||||||||||||||||||||||    
T  6958978 aaaagtggtcaaaatttggggtatgacag 6959006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 8770928 - 8770880
Alignment:
Q  218 caaatgccttgaccagccccatcggctttaggaggtacatacgtgtatc 266  Q
    |||||||| |||||||||| |  ||||||||||| ||||||||||||||    
T  8770928 caaatgccgtgaccagccctactggctttaggagatacatacgtgtatc 8770880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 16223612 - 16223572
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  16223612 cttgaggacaagcaacaatttaagtttggggttgtgatgac 16223572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 18541774 - 18541814
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  18541774 cttgaggacaaggaatggttcaagtttggggttgtgatgac 18541814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 31283869 - 31283909
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||  ||||||||||||||||||||||||    
T  31283869 cttgaggacaagcaatagtttaagtttggggttgtgatgac 31283909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 47053927 - 47053967
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  47053927 cttgaggacaaggaatggttcaagtttggggttgtgatgac 47053967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35356 - 35421
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35356 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 121293 - 121228
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  121293 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 121228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 538
Target Start/End: Original strand, 446937 - 447014
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgaga 538  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||| ||||  |||| |||||||||| |||||||    
T  446937 tgatgacagagcatcatatgatattttt-gctatgtttttagtacttttcctttacatttgaagacaaataagatgaga 447014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11058 - 10993
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11058 cgactttaacaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 10993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33100 - 33035
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33100 cgactttaaaaatacgtataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 33035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15878 - 15813
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15878 cgactttaaaaatacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 15813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40833 - 40898
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40833 cgactttaaaaatacgaataaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 40898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 86 - 149
Alignment:
Q  3 actttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  86 actttaaaaatacgaataaaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 23522 - 23463
Alignment:
Q  8 aaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23522 aaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 23463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 406 - 528
Target Start/End: Complemental strand, 22783 - 22661
Alignment:
Q  406 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 505  Q
    |||||||||||||||||||| ||||||| |||| |||  ||||||||||||||||||||||  || ||||||||   |||||||| ||||||||| ||||    
T  22783 taacttcttgctattgtgttgcttgagggcaagcaacactttaagtttggggttgtgatgatagaccatcatataccatttttggctatgttttttgtac 22684  T
Q  506 ttttctttgaatttaaagacaaa 528  Q
    |||| |||| |||| ||||||||    
T  22683 ttttatttgcatttgaagacaaa 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 932 - 995
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  932 ctttaaaaatacgaataaaatgggtaagaatagagaaagctggtcaaaatttggggtatgacag 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 201 - 139
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  201 ctttaaaaatacgaataaaatgggtagaaatagagaaaagtggtcaaaatttggggtatgaca 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4455 - 4390
Alignment:
Q  1 cgactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||||    
T  4455 cgactttaaaaatatgaataaaatgggtaagaatagagaaaaaatgtcaaaatttggggtatgaca 4390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 404 - 523
Target Start/End: Complemental strand, 2071 - 1952
Alignment:
Q  404 tctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagt 503  Q
    ||||||||||||||||| | || ||||| |||||| |||| |||||||||||||||| ||||| |||  || ||||||| |||||   ||||||||||||    
T  2071 tctaacttcttgctatttttttgcttgatgacaagtaacgttttaagtttggggttgcgatgatggaatataatatgatgtttttaactatgtttttagt 1972  T
Q  504 acttttctttgaatttaaag 523  Q
      ||||||||| ||||||||    
T  1971 tattttctttgcatttaaag 1952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 304
Target Start/End: Complemental strand, 2323 - 2186
Alignment:
Q  168 aattgcttcaatctcatagtaaggtacaatcacatgatgact-gagtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtatc 266  Q
    |||| ||||||| |||||| || |||||||||||||| |||| ||||||| ||||| || | |||| |  ||  ||||||||||||||||||| ||| ||    
T  2323 aattacttcaatttcatagcaaagtacaatcacatgacgacttgagtgtggcaaataccgtaaccatctgcactggctttaggaggtacatacatgtgtc 2224  T
Q  267 ttggaattttatctggttgaaagtaattgtatcttctc 304  Q
    ||| | || ||  |||||||||||||  ||||||||||    
T  2223 ttgaatttgtacgtggttgaaagtaagagtatcttctc 2186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 7648 - 7694
Alignment:
Q  20 aaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7648 aaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 7694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 24001 - 24041
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  24001 cttgaggacaaggaatggtttaagtttggggttgtgatgac 24041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 28239 - 28279
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  28239 cttgaggacaaggaacggttcaagtttggggttgtgatgac 28279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 377 - 438
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    ||||||| |||||| |||||| |||| |||||||||||||||||||||||||||||||||||    
T  377 tttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 192589 - 192526
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacagc 68  Q
    ||||||| |||||| |||||  |||| |||||||||||||||||||||||||||||||||||||    
T  192589 tttaaaagtacgaacaaaatctgtaaaaatagagaaaagtggtcaaaatttggggtatgacagc 192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 376 - 438
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||| |||||| |||||| |||| |||| |||||||||||||||||||||||||||||||    
T  376 tttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgacag 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 7193 - 7255
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||| ||| |||||||||||||| || ||||||||||||||||||||| ||||||||||    
T  7193 ctttaaaagtacaaataaaatgggtaaaaacagagaaaagtggtcaaaatttagggtatgaca 7255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 81790 - 81852
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||| |||||| |||||| |||| |||||||||||||||||||||||| |||||||||||    
T  81790 tttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttagggtatgacag 81852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 65542 - 65604
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||| |||||| |||||| |||| ||||||||||||||  ||||||||||||||||||||    
T  65542 tttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgtacaaaatttggggtatgacag 65604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 461 - 538
Target Start/End: Original strand, 6128 - 6205
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 538  Q
    |||||||  |||||||||||  |||||||| ||||||||||||||||||||||  ||||||| ||||||| |||||||    
T  6128 tgatgacatagcatcatatggcatttttggctatgtttttagtacttttctttccatttaaacacaaataagatgaga 6205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 625
Target Start/End: Complemental strand, 7421 - 7349
Alignment:
Q  553 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacaggt 625  Q
    ||||||||||||||  ||||| ||  ||||||||||||||||||||||||| || |||||||||| |||||||    
T  7421 tgatggacgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgttctccacaggt 7349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 530
Target Start/End: Original strand, 21336 - 21398
Alignment:
Q  468 ggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||| |||| |||| |||||    
T  21336 ggagcatcatatgatattttttattatgtttttagtgtttttctttgcatttgaagaaaaata 21398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 461 - 537
Target Start/End: Complemental strand, 8892 - 8816
Alignment:
Q  461 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgag 537  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||||| |||  |||| |||| ||||| ||||||    
T  8892 tgatgatggaacatcatatgatatttttggttatttttttagtacttttattttcattttaagaaaaataagatgag 8816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 545
Target Start/End: Complemental strand, 13239 - 13170
Alignment:
Q  476 atatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 545  Q
    ||||||||||||| |||||||||||||||||||| |||  || | |||||||||| ||||||| ||||||    
T  13239 atatgatatttttagttatgtttttagtacttttattttcatattaagacaaataagatgagagttagag 13170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1487 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 762 - 801
Alignment:
Q  20 aaaatgggtaagaatagagaaaagtggtcaaaatttgggg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  762 aaaatgggtaagaatagagaaaagtggtcaaaatttgggg 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0990 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0990
Description:

Target: scaffold0990; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 314
Target Start/End: Original strand, 3134 - 3237
Alignment:
Q  211 agtgtgacaaatgccttgaccagccccatcggctttaggaggtacatacgtgtatcttggaattttatctggttgaaagtaattgtatcttctctaagtt 310  Q
    ||||||||||||||||||||||  ||||   |  ||||||| |||||| |||||||||| |||| ||| |||||||||||||  ||||| | ||||||||    
T  3134 agtgtgacaaatgccttgaccaatcccactagtcttaggagatacatatgtgtatcttgaaattgtatgtggttgaaagtaagagtatcctttctaagtt 3233  T
Q  311 tgtt 314  Q
    ||||    
T  3234 tgtt 3237  T

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Target: scaffold0990; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 3075 - 3127
Alignment:
Q  131 gtgtgtatggtgatatagaccttgaatgtctatttagaattgcttcaatctca 183  Q
    |||||| || ||||||| ||||| |||||||||||| ||||||||||||||||    
T  3075 gtgtgtgtgatgatatataccttcaatgtctatttataattgcttcaatctca 3127  T

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Target: scaffold0514 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 10912 - 10974
Alignment:
Q  5 tttaaaaatacgaataaaatg-ggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||    
T  10912 tttaaaaatacgaataaaatttggtaaaaataga-aaaagtggtcaaaatttggggtatgacag 10974  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 530
Target Start/End: Complemental strand, 27128 - 27068
Alignment:
Q  470 agcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 530  Q
    ||||||| |||||||||| || ||||||||||||||||||||||| |||| |||| |||||    
T  27128 agcatcacatgatattttcggctatgtttttagtacttttctttgcatttgaagataaata 27068  T

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Target: scaffold0389 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 477 - 415
Alignment:
Q  5 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||| |||||| |||||| |||| | || ||||||||||||||||||| |||||||||||    
T  477 tttaaaagtacgaacaaaatgtgtaaaattaaagaaaagtggtcaaaatttagggtatgacag 415  T

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Target: scaffold0222 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 20485 - 20547
Alignment:
Q  4 ctttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||| |||||| |||||| |||| |  | ||||||||||||||||||||||||||||||    
T  20485 ctttaaaagtacgaacaaaatgtgtaaaaccatagaaaagtggtcaaaatttggggtatgaca 20547  T

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Target: scaffold0484 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 11457 - 11507
Alignment:
Q  17 aataaaatgggtaagaatag-agaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||||||| | |||| |||||||||||||||||| ||||    
T  11457 aataaaatgggtaagaatagaaaaaaaatggtcaaaatttggggtacgaca 11507  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 25278 - 25216
Alignment:
Q  402 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgat 464  Q
    |||||||||| || ||||| |||| |||||||||||| |||   |||||||||||||||||||    
T  25278 attctaacttttttctattttgttacttgaggacaagcaacatattaagtttggggttgtgat 25216  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 65710 - 65744
Alignment:
Q  33 atagagaaaagtggtcaaaatttggggtatgacag 67  Q
    ||||||||||||||||||||||| |||||||||||    
T  65710 atagagaaaagtggtcaaaatttagggtatgacag 65744  T

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Target: scaffold0084 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 28544 - 28585
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgacg 468  Q
    |||||||||||| || |||| |||||||||||||||||||||    
T  28544 cttgaggacaaggaatggttcaagtttggggttgtgatgacg 28585  T

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Target: scaffold0321 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 3881 - 3841
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  3881 cttgaggacaaggaatggttcaagtttggggttgtgatgac 3841  T

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Target: scaffold0270 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 1094 - 1054
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  1094 cttgaggacaaggaatggttcaagtttggggttgtgatgac 1054  T

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Target: scaffold0198 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 422 - 466
Target Start/End: Original strand, 3979 - 4023
Alignment:
Q  422 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 466  Q
    |||| ||||||||| ||||| |||| |||||||||||||||||||    
T  3979 tgttccttgaggactagaaagggttcaagtttggggttgtgatga 4023  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 467
Target Start/End: Complemental strand, 38422 - 38382
Alignment:
Q  427 cttgaggacaagaaacggtttaagtttggggttgtgatgac 467  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  38422 cttgaggacaagcaacaatttaagtttggggttgtgatgac 38382  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 61347 - 61288
Alignment:
Q  8 aaaaatacgaataaaa-tgggtaagaa-tagagaaaagtggtcaaaatttggggtatgaca 66  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||||||||||||||||    
T  61347 aaaaatacgaataaaaatgagtaaaaaatagagaaa-gtggtcaaaatttggggtatgaca 61288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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