View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12176_high_3 (Length: 232)

Name: NF12176_high_3
Description: NF12176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12176_high_3
NF12176_high_3
[»] chr6 (33 HSPs)
chr6 (17-213)||(19275181-19275360)
chr6 (16-59)||(3414696-3414739)
chr6 (17-59)||(6564889-6564931)
chr6 (21-59)||(14656209-14656247)
chr6 (21-61)||(6564593-6564633)
chr6 (17-61)||(27765059-27765103)
chr6 (16-59)||(3968658-3968701)
chr6 (16-59)||(6412231-6412274)
chr6 (16-59)||(21385264-21385307)
chr6 (16-59)||(22543662-22543705)
chr6 (20-59)||(24901252-24901291)
chr6 (21-59)||(3276303-3276341)
chr6 (21-59)||(8170100-8170138)
chr6 (21-59)||(10910913-10910951)
chr6 (17-59)||(11925752-11925794)
chr6 (21-59)||(12757623-12757661)
chr6 (17-59)||(17765022-17765064)
chr6 (21-59)||(19690406-19690444)
chr6 (74-134)||(12176585-12176650)
chr6 (16-61)||(19129404-19129449)
chr6 (19-60)||(19690466-19690507)
chr6 (74-130)||(25431796-25431857)
chr6 (74-130)||(34582834-34582895)
chr6 (21-61)||(1214765-1214805)
chr6 (98-134)||(1890423-1890459)
chr6 (25-61)||(13268180-13268216)
chr6 (74-125)||(14428652-14428708)
chr6 (25-61)||(15722681-15722717)
chr6 (74-125)||(15962331-15962387)
chr6 (74-125)||(23770163-23770219)
chr6 (18-46)||(25121209-25121237)
chr6 (74-125)||(30928683-30928739)
chr6 (74-125)||(34582531-34582587)
[»] chr3 (50 HSPs)
chr3 (17-61)||(35177326-35177370)
chr3 (17-59)||(19297894-19297936)
chr3 (16-59)||(49324090-49324133)
chr3 (17-59)||(29490688-29490730)
chr3 (74-125)||(46186713-46186769)
chr3 (16-59)||(474057-474100)
chr3 (16-59)||(12740920-12740963)
chr3 (24-59)||(30034120-30034155)
chr3 (17-59)||(863294-863336)
chr3 (21-59)||(1721102-1721140)
chr3 (21-59)||(4034730-4034768)
chr3 (21-59)||(12741220-12741258)
chr3 (21-59)||(26090027-26090065)
chr3 (21-59)||(28452160-28452198)
chr3 (25-125)||(29490636-29490741)
chr3 (21-59)||(30034421-30034459)
chr3 (17-125)||(30106105-30106218)
chr3 (17-59)||(35177268-35177310)
chr3 (17-125)||(35565510-35565623)
chr3 (21-59)||(35569085-35569123)
chr3 (17-59)||(39288586-39288628)
chr3 (17-59)||(46186716-46186758)
chr3 (21-59)||(46622078-46622116)
chr3 (21-59)||(47114500-47114538)
chr3 (21-59)||(47336530-47336568)
chr3 (21-59)||(48924189-48924227)
chr3 (21-59)||(51550395-51550433)
chr3 (21-59)||(54608812-54608850)
chr3 (22-59)||(474358-474395)
chr3 (74-134)||(863274-863339)
chr3 (81-133)||(3151744-3151801)
chr3 (74-134)||(4513256-4513321)
chr3 (23-64)||(14772280-14772321)
chr3 (77-125)||(20611022-20611075)
chr3 (74-134)||(31869898-31869963)
chr3 (77-125)||(39288575-39288628)
chr3 (22-59)||(43441283-43441320)
chr3 (17-46)||(45161139-45161168)
chr3 (74-125)||(4950039-4950095)
chr3 (74-125)||(5345631-5345687)
chr3 (25-61)||(7957120-7957156)
chr3 (21-49)||(20907160-20907188)
chr3 (74-125)||(22008528-22008584)
chr3 (74-125)||(22016046-22016102)
chr3 (74-125)||(25710812-25710868)
chr3 (25-61)||(39132800-39132836)
chr3 (25-61)||(47005225-47005261)
chr3 (74-125)||(50196301-50196357)
chr3 (81-132)||(51834891-51834947)
chr3 (74-125)||(53701605-53701661)
[»] chr1 (50 HSPs)
chr1 (17-59)||(15211524-15211566)
chr1 (25-125)||(26324840-26324945)
chr1 (16-59)||(32420111-32420154)
chr1 (17-63)||(18079468-18079514)
chr1 (21-59)||(26207291-26207329)
chr1 (74-125)||(41739065-41739118)
chr1 (25-61)||(15211749-15211785)
chr1 (25-61)||(17129977-17130013)
chr1 (21-53)||(20756038-20756070)
chr1 (74-125)||(26442841-26442897)
chr1 (16-59)||(15526306-15526349)
chr1 (76-134)||(21391089-21391152)
chr1 (16-59)||(24977791-24977834)
chr1 (16-59)||(30322942-30322985)
chr1 (16-59)||(33000613-33000656)
chr1 (16-59)||(35056543-35056586)
chr1 (16-59)||(38150861-38150904)
chr1 (16-59)||(40718123-40718166)
chr1 (16-59)||(45380285-45380328)
chr1 (24-59)||(49073704-49073739)
chr1 (21-59)||(3247211-3247249)
chr1 (21-59)||(4789321-4789359)
chr1 (21-59)||(8140447-8140485)
chr1 (21-59)||(10631177-10631215)
chr1 (21-59)||(10887547-10887585)
chr1 (21-59)||(12360917-12360955)
chr1 (21-59)||(19720725-19720763)
chr1 (21-59)||(32906189-32906227)
chr1 (21-59)||(39747784-39747822)
chr1 (17-59)||(42482992-42483034)
chr1 (81-125)||(37545630-37545679)
chr1 (74-130)||(48609536-48609597)
chr1 (74-125)||(3753215-3753271)
chr1 (74-125)||(4323830-4323886)
chr1 (74-125)||(6567438-6567494)
chr1 (17-61)||(7350621-7350665)
chr1 (74-125)||(12361013-12361069)
chr1 (74-125)||(13770491-13770547)
chr1 (74-125)||(14007491-14007547)
chr1 (74-125)||(18302329-18302385)
chr1 (17-61)||(18927848-18927892)
chr1 (81-132)||(19622650-19622706)
chr1 (17-61)||(20948966-20949010)
chr1 (74-125)||(22919686-22919742)
chr1 (23-59)||(24654118-24654154)
chr1 (17-61)||(28507186-28507230)
chr1 (74-125)||(29072499-29072555)
chr1 (81-132)||(35005693-35005749)
chr1 (74-125)||(35308053-35308109)
chr1 (74-125)||(45368492-45368548)
[»] chr7 (47 HSPs)
chr7 (17-61)||(3808064-3808108)
chr7 (21-59)||(34877787-34877825)
chr7 (18-60)||(38186706-38186748)
chr7 (74-130)||(23816667-23816728)
chr7 (25-61)||(35665946-35665982)
chr7 (16-59)||(1614572-1614615)
chr7 (16-59)||(8144308-8144351)
chr7 (16-59)||(23399920-23399963)
chr7 (16-59)||(23676145-23676188)
chr7 (16-59)||(25092173-25092216)
chr7 (16-59)||(25988398-25988441)
chr7 (16-59)||(30709588-30709631)
chr7 (20-59)||(39438754-39438793)
chr7 (74-132)||(39832901-39832964)
chr7 (21-59)||(5354781-5354819)
chr7 (20-58)||(6887174-6887212)
chr7 (21-59)||(6911095-6911133)
chr7 (17-59)||(6954871-6954913)
chr7 (25-59)||(20355488-20355522)
chr7 (21-59)||(27458412-27458450)
chr7 (21-59)||(35104091-35104129)
chr7 (21-59)||(35837937-35837975)
chr7 (21-59)||(35838286-35838324)
chr7 (21-59)||(39520679-39520717)
chr7 (21-59)||(44403198-44403236)
chr7 (21-59)||(46759671-46759709)
chr7 (21-59)||(46759891-46759929)
chr7 (22-59)||(19005611-19005648)
chr7 (74-130)||(31310362-31310423)
chr7 (18-59)||(37952997-37953038)
chr7 (22-59)||(38486491-38486528)
chr7 (74-125)||(1974011-1974067)
chr7 (74-125)||(6847061-6847117)
chr7 (74-125)||(10358310-10358366)
chr7 (74-125)||(12894344-12894400)
chr7 (74-125)||(17999663-17999719)
chr7 (25-61)||(19005831-19005867)
chr7 (74-125)||(19561392-19561448)
chr7 (74-125)||(19757750-19757806)
chr7 (74-125)||(21223407-21223463)
chr7 (17-61)||(22540178-22540222)
chr7 (13-61)||(24717239-24717287)
chr7 (74-125)||(28911848-28911904)
chr7 (74-125)||(35210457-35210513)
chr7 (25-61)||(35837995-35838031)
chr7 (74-125)||(44344731-44344787)
chr7 (25-61)||(44841426-44841462)
[»] chr5 (52 HSPs)
chr5 (16-63)||(31602217-31602264)
chr5 (17-59)||(20690746-20690788)
chr5 (21-59)||(42207255-42207293)
chr5 (17-59)||(42553655-42553697)
chr5 (16-59)||(2636682-2636725)
chr5 (16-59)||(5917139-5917182)
chr5 (74-132)||(5950171-5950234)
chr5 (21-60)||(9588560-9588599)
chr5 (25-64)||(17070603-17070642)
chr5 (16-59)||(19565480-19565523)
chr5 (16-59)||(19685030-19685073)
chr5 (74-132)||(29692739-29692802)
chr5 (21-59)||(45151-45189)
chr5 (21-59)||(1381260-1381298)
chr5 (21-59)||(6912806-6912844)
chr5 (21-59)||(10744003-10744041)
chr5 (21-59)||(14318058-14318096)
chr5 (25-63)||(15916355-15916393)
chr5 (21-59)||(18258476-18258514)
chr5 (21-59)||(30888173-30888211)
chr5 (74-131)||(31037683-31037745)
chr5 (21-59)||(35928407-35928445)
chr5 (22-59)||(1286995-1287032)
chr5 (74-134)||(30800792-30800857)
chr5 (22-59)||(35609587-35609624)
chr5 (74-130)||(38554748-38554807)
chr5 (22-59)||(38962819-38962856)
chr5 (17-61)||(45388-45432)
chr5 (74-125)||(2217496-2217552)
chr5 (74-125)||(7075574-7075630)
chr5 (74-125)||(9179595-9179651)
chr5 (77-132)||(10409271-10409331)
chr5 (74-125)||(10743996-10744052)
chr5 (74-125)||(11799400-11799456)
chr5 (81-132)||(14318040-14318096)
chr5 (74-125)||(16038682-16038738)
chr5 (25-61)||(20661019-20661055)
chr5 (74-125)||(20690735-20690791)
chr5 (74-125)||(26133355-26133411)
chr5 (74-125)||(28863512-28863568)
chr5 (74-125)||(28863780-28863836)
chr5 (21-61)||(28871709-28871749)
chr5 (81-132)||(29875674-29875730)
chr5 (74-125)||(30800496-30800552)
chr5 (74-125)||(33335968-33336024)
chr5 (74-125)||(35609305-35609361)
chr5 (23-59)||(35877003-35877039)
chr5 (74-125)||(36577724-36577780)
chr5 (74-125)||(36578025-36578081)
chr5 (74-125)||(38786161-38786217)
chr5 (74-125)||(40029439-40029495)
chr5 (74-125)||(40167950-40168006)
[»] chr4 (51 HSPs)
chr4 (16-59)||(25358484-25358527)
chr4 (17-59)||(22584300-22584342)
chr4 (21-59)||(47022753-47022791)
chr4 (17-59)||(54208770-54208812)
chr4 (22-59)||(47532622-47532659)
chr4 (17-61)||(2322317-2322361)
chr4 (74-125)||(22099854-22099910)
chr4 (74-125)||(22584289-22584345)
chr4 (74-125)||(51545631-51545687)
chr4 (16-59)||(43231101-43231144)
chr4 (24-59)||(52543435-52543470)
chr4 (21-59)||(13073772-13073810)
chr4 (21-59)||(13631241-13631279)
chr4 (21-59)||(13764756-13764794)
chr4 (21-59)||(14791755-14791793)
chr4 (21-59)||(19903604-19903642)
chr4 (17-59)||(20291999-20292041)
chr4 (17-59)||(22099857-22099899)
chr4 (21-59)||(25423937-25423975)
chr4 (21-59)||(25424261-25424299)
chr4 (21-59)||(29420486-29420524)
chr4 (21-59)||(35420652-35420690)
chr4 (21-59)||(35464031-35464069)
chr4 (77-130)||(51708690-51708748)
chr4 (21-59)||(52442041-52442079)
chr4 (22-59)||(42823789-42823826)
chr4 (22-59)||(53915997-53916034)
chr4 (21-61)||(2034743-2034783)
chr4 (75-134)||(4279015-4279079)
chr4 (74-125)||(8760723-8760779)
chr4 (25-61)||(8905128-8905164)
chr4 (74-125)||(13064407-13064463)
chr4 (17-61)||(13073831-13073875)
chr4 (74-125)||(13479553-13479609)
chr4 (25-61)||(14594460-14594496)
chr4 (74-125)||(16712633-16712689)
chr4 (25-61)||(20144490-20144526)
chr4 (25-61)||(26314061-26314097)
chr4 (74-125)||(28809013-28809069)
chr4 (17-49)||(41439810-41439842)
chr4 (25-61)||(41439859-41439895)
chr4 (74-125)||(43368467-43368523)
chr4 (19-59)||(44925498-44925538)
chr4 (74-125)||(45474538-45474594)
chr4 (74-125)||(52017507-52017563)
chr4 (74-125)||(52017812-52017868)
chr4 (74-125)||(52442034-52442090)
chr4 (17-57)||(53307829-53307869)
chr4 (74-125)||(53717116-53717172)
chr4 (25-61)||(54903369-54903405)
chr4 (74-125)||(55072391-55072447)
[»] chr2 (48 HSPs)
chr2 (20-59)||(1295196-1295235)
chr2 (17-59)||(31644854-31644896)
chr2 (17-59)||(44559354-44559396)
chr2 (17-61)||(5164381-5164425)
chr2 (74-133)||(44985615-44985679)
chr2 (16-59)||(2481206-2481249)
chr2 (16-59)||(20131330-20131373)
chr2 (16-59)||(33576061-33576104)
chr2 (16-59)||(41451850-41451893)
chr2 (21-59)||(2265346-2265384)
chr2 (21-59)||(3172481-3172519)
chr2 (21-59)||(4424134-4424172)
chr2 (17-59)||(4794418-4794460)
chr2 (21-59)||(13215073-13215111)
chr2 (17-59)||(17912462-17912504)
chr2 (21-59)||(20939274-20939312)
chr2 (21-59)||(23990145-23990183)
chr2 (21-59)||(25705098-25705136)
chr2 (81-134)||(27311018-27311076)
chr2 (17-59)||(29182181-29182223)
chr2 (21-59)||(36806845-36806883)
chr2 (17-59)||(37228746-37228788)
chr2 (77-130)||(38639409-38639467)
chr2 (17-59)||(38639425-38639467)
chr2 (21-59)||(42695881-42695919)
chr2 (21-59)||(44559075-44559113)
chr2 (25-125)||(44559302-44559407)
chr2 (21-59)||(45442645-45442683)
chr2 (74-134)||(33732855-33732920)
chr2 (22-59)||(36815785-36815822)
chr2 (74-130)||(43592043-43592104)
chr2 (25-61)||(1138053-1138089)
chr2 (98-130)||(3671000-3671032)
chr2 (74-125)||(3838206-3838262)
chr2 (74-125)||(11713487-11713543)
chr2 (17-61)||(11788124-11788168)
chr2 (74-125)||(11788358-11788414)
chr2 (74-125)||(24483833-24483889)
chr2 (74-125)||(29865453-29865509)
chr2 (74-125)||(31644843-31644899)
chr2 (74-125)||(36622252-36622308)
chr2 (74-125)||(36622526-36622582)
chr2 (21-49)||(36815511-36815539)
chr2 (74-125)||(37228735-37228791)
chr2 (74-125)||(40302281-40302337)
chr2 (74-125)||(41693676-41693732)
chr2 (74-125)||(41791254-41791310)
chr2 (74-133)||(43597148-43597212)
[»] chr8 (43 HSPs)
chr8 (21-59)||(9175025-9175063)
chr8 (17-59)||(9175316-9175358)
chr8 (74-125)||(7272422-7272478)
chr8 (74-125)||(18549203-18549259)
chr8 (16-59)||(1778577-1778620)
chr8 (16-59)||(2728245-2728288)
chr8 (16-59)||(3512210-3512253)
chr8 (16-59)||(7326099-7326142)
chr8 (16-59)||(7420243-7420286)
chr8 (25-134)||(9175264-9175378)
chr8 (16-59)||(11019533-11019576)
chr8 (16-59)||(11976680-11976723)
chr8 (16-59)||(32725920-32725963)
chr8 (16-59)||(34963608-34963651)
chr8 (16-59)||(35097341-35097384)
chr8 (16-59)||(35346642-35346685)
chr8 (16-59)||(35346942-35346985)
chr8 (21-59)||(7185953-7185991)
chr8 (17-59)||(7272433-7272475)
chr8 (21-59)||(8298600-8298638)
chr8 (21-59)||(8298924-8298962)
chr8 (21-59)||(10337132-10337170)
chr8 (21-59)||(13232211-13232249)
chr8 (21-59)||(14489022-14489060)
chr8 (17-59)||(24090433-24090475)
chr8 (21-59)||(42133103-42133141)
chr8 (77-125)||(1525811-1525864)
chr8 (17-46)||(2356193-2356222)
chr8 (18-59)||(2811727-2811768)
chr8 (22-59)||(9496354-9496391)
chr8 (22-59)||(25600243-25600280)
chr8 (22-59)||(38930315-38930352)
chr8 (74-125)||(6146891-6146947)
chr8 (25-61)||(13779428-13779464)
chr8 (74-125)||(16789311-16789367)
chr8 (21-61)||(23939618-23939658)
chr8 (74-125)||(24090430-24090486)
chr8 (81-132)||(24954959-24955015)
chr8 (74-125)||(27341533-27341589)
chr8 (74-125)||(29158356-29158412)
chr8 (74-125)||(29488052-29488108)
chr8 (74-125)||(40844158-40844214)
chr8 (74-125)||(43477165-43477221)
[»] scaffold0056 (5 HSPs)
scaffold0056 (16-59)||(50022-50065)
scaffold0056 (16-59)||(55123-55166)
scaffold0056 (25-61)||(49971-50007)
scaffold0056 (74-125)||(54817-54873)
scaffold0056 (25-61)||(55072-55108)
[»] scaffold0326 (2 HSPs)
scaffold0326 (81-134)||(4034-4092)
scaffold0326 (81-134)||(19216-19274)
[»] scaffold0160 (1 HSPs)
scaffold0160 (21-59)||(27313-27351)
[»] scaffold0119 (1 HSPs)
scaffold0119 (25-59)||(17048-17082)
[»] scaffold0005 (2 HSPs)
scaffold0005 (21-59)||(47938-47976)
scaffold0005 (25-61)||(222882-222918)
[»] scaffold0001 (1 HSPs)
scaffold0001 (21-59)||(148231-148269)
[»] scaffold0078 (1 HSPs)
scaffold0078 (18-59)||(4025-4066)
[»] scaffold1001 (1 HSPs)
scaffold1001 (74-125)||(2780-2836)
[»] scaffold0535 (2 HSPs)
scaffold0535 (74-125)||(8734-8790)
scaffold0535 (74-125)||(8970-9026)
[»] scaffold0085 (1 HSPs)
scaffold0085 (25-61)||(34978-35014)
[»] scaffold0065 (1 HSPs)
scaffold0065 (74-125)||(3860-3916)
[»] scaffold0003 (1 HSPs)
scaffold0003 (74-125)||(366215-366271)


Alignment Details
Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 19275181 - 19275360
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaactatnnnnnnnnnttacagagactaaaaccaaaacgaatttgcatggactaaaacc 116  Q
    |||||||||||||||||||||||||||||| || |||||||||||||          |||||||||||||||||||||||||||||||||||||||||||    
T  19275181 cagagactaaaaccaaaacgagacatatttgcagggaccaaaaactaaaaaaaaaaattacagagactaaaaccaaaacgaatttgcatggactaaaacc 19275280  T
Q  117 atattttagactaaaatacgggaccaaaacagatggcattttgatcagaacaacctgtagggatatttacctagcggcatagtttgaccaacctcac 213  Q
    ||||||||||                 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19275281 atattttaga-----------------aacagatggcattttgaacagaacaacctgtagggatatttacctagcggcatagtttgaccaacctcac 19275360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3414696 - 3414739
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  3414696 gcagggactaaaaccaaaacgagacatatttacagggaccaaaa 3414739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 6564889 - 6564931
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  6564889 cagagactaaaaccaaaacgagacatatttgcagggaccaaaa 6564931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 14656209 - 14656247
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  14656209 gactaaaaccaaaacgagacatatttgcaaggaccaaaa 14656247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 6564633 - 6564593
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  6564633 gactaaaaccaaaacgagacatatttgcagggaccaaaaac 6564593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 27765059 - 27765103
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||||||||||||||| || |||||||||||    
T  27765059 cagagaccaaaaccaaaacgagacatatttgcagggaccaaaaac 27765103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 3968701 - 3968658
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  3968701 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 3968658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 6412274 - 6412231
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  6412274 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 6412231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 21385307 - 21385264
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  21385307 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 21385264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 22543662 - 22543705
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  22543662 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 22543705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 24901291 - 24901252
Alignment:
Q  20 agactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  24901291 agactaaaaccaaaacgagacatatttgcagggaccaaaa 24901252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 3276303 - 3276341
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  3276303 gactaaaaccaaaacgagacatatttgcagggaccaaaa 3276341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 8170100 - 8170138
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  8170100 gactaaaaccaaaacgagacatatttgcagggaccaaaa 8170138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 10910913 - 10910951
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  10910913 gactaaaaccaaaacgagacatatttgcagggaccaaaa 10910951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 11925794 - 11925752
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||| ||||||||||||||||| || |||||||||    
T  11925794 cagagactaaaatcaaaacgagacatatttgcagggaccaaaa 11925752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 12757661 - 12757623
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  12757661 gactaaaaccaaaacgagacatatttgcagggaccaaaa 12757623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 17765064 - 17765022
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| ||||||||||||||||||||||||| || |||||||||    
T  17765064 cagaaactaaaaccaaaacgagacatatttgcagggaccaaaa 17765022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 19690444 - 19690406
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  19690444 gactaaaaccaaaacgagacatatttgcagggaccaaaa 19690406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 12176585 - 12176650
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||  ||||||||    
T  12176585 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttaacctaaaata 12176650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 19129404 - 19129449
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||| ||| |||||||||||||||||||||| || |||||||||||    
T  19129404 gcagggaccaaaaccaaaacgagacatatttgcagggaccaaaaac 19129449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 19690507 - 19690466
Alignment:
Q  19 gagactaaaaccaaaacgagacatatttacaaggaccaaaaa 60  Q
    ||||| |||||||||||||||||||||| |||||||| ||||    
T  19690507 gagaccaaaaccaaaacgagacatatttgcaaggacccaaaa 19690466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 25431796 - 25431857
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaa 130  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||||    
T  25431796 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaa 25431857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 34582834 - 34582895
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaa 130  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||||    
T  34582834 ttacagggactaaaaccaaaacgaggtatatttgcagggactaaaaccatattttagcctaa 34582895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 1214805 - 1214765
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||||||||||| |||||||||| || |||||||||||    
T  1214805 gactaaaaccaaaacaagacatatttgcagggaccaaaaac 1214765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 1890423 - 1890459
Alignment:
Q  98 atttgcatggactaaaaccatattttagactaaaata 134  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  1890423 atttgcagggactaaaaccatattttagcctaaaata 1890459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 13268216 - 13268180
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  13268216 aaaaccaaaacgagacatatttgcagggaccaaaaac 13268180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 14428708 - 14428652
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  14428708 ttacagggactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttag 14428652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 15722717 - 15722681
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  15722717 aaaatcaaaacgaggcatatttacaaggaccaaaaac 15722681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 15962331 - 15962387
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  15962331 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 15962387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 23770219 - 23770163
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  23770219 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 23770163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 25121237 - 25121209
Alignment:
Q  18 agagactaaaaccaaaacgagacatattt 46  Q
    |||||||||||||||||||||||||||||    
T  25121237 agagactaaaaccaaaacgagacatattt 25121209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 30928739 - 30928683
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  30928739 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 30928683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 34582587 - 34582531
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  34582587 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 34582531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 35177370 - 35177326
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  35177370 cagagaccaaaaccaaaacgagacatatttacaaggaccaaaaac 35177326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 19297894 - 19297936
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  19297894 cagagactaaaaacaaaacgagacatatttacaaggaccaaaa 19297936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 49324090 - 49324133
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  49324090 gcagggactaaaaccaaaacgagacatatttacagggaccaaaa 49324133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 29490688 - 29490730
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  29490688 cagagactaaaaccaaaacgagacatatttgcagggaccaaaa 29490730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 46186713 - 46186769
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  46186713 ttacagagactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttag 46186769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 474100 - 474057
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  474100 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 474057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 12740963 - 12740920
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  12740963 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 12740920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 30034155 - 30034120
Alignment:
Q  24 taaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30034155 taaaaccaaaacgaggcatatttacaaggaccaaaa 30034120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 863336 - 863294
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||| |||||||||||||||| || |||||||||    
T  863336 cagagactaaaactaaaacgagacatatttgcatggaccaaaa 863294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 1721140 - 1721102
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  1721140 gactaaaaccaaaatgagacatatttgcaaggaccaaaa 1721102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 4034768 - 4034730
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  4034768 gactaaaaccaaaacgagacatatttgcagggaccaaaa 4034730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 12741220 - 12741258
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  12741220 gactaaaaccaaaacgagacatatttgcagggaccaaaa 12741258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 26090027 - 26090065
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  26090027 gactaaaaccaaaacgagacatatttgcagggaccaaaa 26090065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 28452198 - 28452160
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  28452198 gactaaaaccaaaacaagacatatttgcaaggaccaaaa 28452160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 29490636 - 29490741
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaactatnnnnnnnnnttacagagactaaaaccaaaacga-----atttgcatggactaaaaccata 119  Q
    ||||||||||||||| |||||| ||||||||||||||            ||||||||||||||||||||||||     ||||||| |||| |||||||||    
T  29490636 aaaaccaaaacgagatatatttgcaaggaccaaaaacagcaaaaaacaattacagagactaaaaccaaaacgagacatatttgcagggaccaaaaccata 29490735  T
Q  120 ttttag 125  Q
    ||||||    
T  29490736 ttttag 29490741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 30034421 - 30034459
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  30034421 gactaaaaccaaaacgagacatatttgcaaggagcaaaa 30034459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 30106105 - 30106218
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaactatnnnnnnnnnttacagagactaaaaccaaaacga-----atttgcatggacta 111  Q
    ||||||| ||||  |||||||||||||||| |||||||||||||| |          |||||| |||||||||||||||||     ||||||| |||| |    
T  30106105 cagagaccaaaattaaaacgagacatatttgcaaggaccaaaaacaaaacaaaaaaattacagggactaaaaccaaaacgaggtatatttgcagggacca 30106204  T
Q  112 aaaccatattttag 125  Q
    ||||||||||||||    
T  30106205 aaaccatattttag 30106218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 35177310 - 35177268
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| ||||||||||||||||||||||||| || |||||||||    
T  35177310 cagaaactaaaaccaaaacgagacatatttgcagggaccaaaa 35177268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 35565623 - 35565510
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaactatnnnnnnnnnttacagagactaaaaccaaaacga-----atttgcatggacta 111  Q
    |||||||||||||||||| ||| ||||||| || ||||||||||| ||         |||||| |||||||||||||||||     ||||||| |||  |    
T  35565623 cagagactaaaaccaaaatgaggcatatttgcagggaccaaaaacaataacaaaaaattacagggactaaaaccaaaacgaggtatatttgcagggaaca 35565524  T
Q  112 aaaccatattttag 125  Q
    ||||||||||||||    
T  35565523 aaaccatattttag 35565510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 35569085 - 35569123
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  35569085 gactaaaaccaaaacgagacatatttgcagggaccaaaa 35569123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 39288628 - 39288586
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||| ||||    
T  39288628 cagagactaaaaccaaaacgagacatatttgcagggactaaaa 39288586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 46186716 - 46186758
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||    
T  46186716 cagagactaaaaccaaaacgaggcatatttgcaaggactaaaa 46186758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 46622078 - 46622116
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  46622078 gactaaaaccaaaacgaaacatatttgcaaggaccaaaa 46622116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 47114538 - 47114500
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  47114538 gactaaaaccaaaacgagacatatttgcagggaccaaaa 47114500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 47336530 - 47336568
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  47336530 gactaaaaccaaaacgagacatatttgcagggaccaaaa 47336568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 48924189 - 48924227
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  48924189 gactaaaaccaaaacgaggcatatttacagggaccaaaa 48924227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 51550395 - 51550433
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  51550395 gactaaaaccaaaacgagacatatttgcagggaccaaaa 51550433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 54608812 - 54608850
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  54608812 gactaaaaccaaaacgagacatatttgcagggaccaaaa 54608850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 474358 - 474395
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| || |||||||||    
T  474358 actaaaaccaaaacgagacatatttgcagggaccaaaa 474395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 863339 - 863274
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||||||||||||| |||||||     |||||||||||| |||| |||||||||| ||||||||    
T  863339 ttacagagactaaaactaaaacgagacatatttgcatggaccaaaatcatattttagcctaaaata 863274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 3151801 - 3151744
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaat 133  Q
    |||||||||||||||||     ||||||| |||||||||||||||||||| |||||||    
T  3151801 gactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctaaaat 3151744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 4513321 - 4513256
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| || |||||    
T  4513321 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagccttaaata 4513256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 14772321 - 14772280
Alignment:
Q  23 ctaaaaccaaaacgagacatatttacaaggaccaaaaactat 64  Q
    ||||||| |||||||||||||||| || ||||||||||||||    
T  14772321 ctaaaactaaaacgagacatatttgcatggaccaaaaactat 14772280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 20611075 - 20611022
Alignment:
Q  77 cagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||     |||||| ||||||||||||||||||||    
T  20611075 cagagactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttag 20611022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 31869898 - 31869963
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||| ||||||||| |||||||     ||||||| |||||||||||||||||||| ||||||||    
T  31869898 ttacagggactaaaactaaaacgagacatatttgcagggactaaaaccatattttagcctaaaata 31869963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 39288628 - 39288575
Alignment:
Q  77 cagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  39288628 cagagactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 39288575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 43441320 - 43441283
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| || |||||||||    
T  43441320 actaaaaccaaaacgagacatatttgcagggaccaaaa 43441283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 45161168 - 45161139
Alignment:
Q  17 cagagactaaaaccaaaacgagacatattt 46  Q
    ||||||||||||||||||||||||||||||    
T  45161168 cagagactaaaaccaaaacgagacatattt 45161139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 4950095 - 4950039
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  4950095 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 4950039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 5345631 - 5345687
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  5345631 ttacagggactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttag 5345687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 7957120 - 7957156
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  7957120 aaaaccaaaacgagacatatttgcagggaccaaaaac 7957156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 49
Target Start/End: Complemental strand, 20907188 - 20907160
Alignment:
Q  21 gactaaaaccaaaacgagacatatttaca 49  Q
    |||||||||||||||||||||||||||||    
T  20907188 gactaaaaccaaaacgagacatatttaca 20907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 22008584 - 22008528
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  22008584 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 22008528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 22016102 - 22016046
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  22016102 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 22016046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 25710812 - 25710868
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  25710812 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 25710868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 39132800 - 39132836
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  39132800 aaaaccaaaacgagacatatttgcagggaccaaaaac 39132836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 47005261 - 47005225
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  47005261 aaaaccaaaacgagacatatttgcagggaccaaaaac 47005225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 50196357 - 50196301
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  50196357 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 50196301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 51834891 - 51834947
Alignment:
Q  81 gactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttagactaaaa 132  Q
    ||||||||||||||||||     |||||| |||||||||||||||||||| ||||||    
T  51834891 gactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagcctaaaa 51834947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 53701605 - 53701661
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  53701605 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 53701661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 15211566 - 15211524
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  15211566 cagagactaaaaccaaaacgagacatatttacagggaccaaaa 15211524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 26324840 - 26324945
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaactatnnnnnnnnnttacagagactaaaaccaaaacga-----atttgcatggactaaaaccata 119  Q
    |||||||||||||||||||||| || ||||||||||| |          ||||||||||||||||||||||||     ||||||||||||||||| ||||    
T  26324840 aaaaccaaaacgagacatatttgcagggaccaaaaacaacaaaaaaaaattacagagactaaaaccaaaacgaggcatatttgcatggactaaaatcata 26324939  T
Q  120 ttttag 125  Q
    ||||||    
T  26324940 ttttag 26324945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 32420154 - 32420111
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  32420154 gcagggactaaaaccaaaacgagacatatttgcaaggaccaaaa 32420111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 18079514 - 18079468
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaacta 63  Q
    ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  18079514 cagagaccaaaaccaaaacgaggcatatttacagggaccaaaaacta 18079468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 26207329 - 26207291
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  26207329 gactaaaaccaaaacgagacatatttgcaaggaccaaaa 26207291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 41739065 - 41739118
Alignment:
Q  74 ttacagagactaaaaccaaaacgaat--ttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||||  ||||| ||||||||||||||||||||    
T  41739065 ttacagggactaaaaccaaaacgaatatttgcagggactaaaaccatattttag 41739118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 15211749 - 15211785
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| ||||||||||||||    
T  15211749 aaaaccaaaacgagacatatttgcaaggaccaaaaac 15211785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 17129977 - 17130013
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| ||||||||||||||    
T  17129977 aaaaccaaaacgagacatatttgcaaggaccaaaaac 17130013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 20756070 - 20756038
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaagga 53  Q
    |||||||||||||||||||||||||||||||||    
T  20756070 gactaaaaccaaaacgagacatatttacaagga 20756038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 26442841 - 26442897
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||||||||||||||||||||||||    
T  26442841 ttacagggactaaaaccaaaacgaggcatatttgcatggactaaaaccatattttag 26442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 15526306 - 15526349
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  15526306 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 15526349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 21391152 - 21391089
Alignment:
Q  76 acagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||||    
T  21391152 acagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaaaata 21391089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 24977834 - 24977791
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  24977834 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 24977791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 30322985 - 30322942
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  30322985 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 30322942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 33000613 - 33000656
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  33000613 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 33000656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 35056586 - 35056543
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  35056586 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 35056543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38150904 - 38150861
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  38150904 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 38150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 40718166 - 40718123
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  40718166 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 40718123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 45380328 - 45380285
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  45380328 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 45380285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 49073739 - 49073704
Alignment:
Q  24 taaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  49073739 taaaaccaaaacgagacatatttgcaaggaccaaaa 49073704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 3247249 - 3247211
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  3247249 gactaaaaccaaaacgagacatatttgcagggaccaaaa 3247211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 4789359 - 4789321
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  4789359 gactaaaaccaaaacgagacatatttgcagggaccaaaa 4789321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 8140485 - 8140447
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  8140485 gactaaaaccaaaacgagacatatttgcagggaccaaaa 8140447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 10631215 - 10631177
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  10631215 gactaaaaccaaaacgagacatatttgcagggaccaaaa 10631177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 10887547 - 10887585
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  10887547 gactaaaaccaaaacgagacatatttgcagggaccaaaa 10887585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 12360917 - 12360955
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  12360917 gactaaaaccaaaacgagacatatttgcagggaccaaaa 12360955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 19720763 - 19720725
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  19720763 gactaaaaccaaaacgagacatatttgcagggaccaaaa 19720725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 32906189 - 32906227
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  32906189 gactaaaatcaaaacgagacatatttgcaaggaccaaaa 32906227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 39747784 - 39747822
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  39747784 gactaaaaccaaaacgagacatatttgcagggaccaaaa 39747822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 42483034 - 42482992
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||| ||||||||||| || |||||||||    
T  42483034 cagagactaaaaccaaaatgagacatatttgcagggaccaaaa 42482992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 37545679 - 37545630
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||||||||||||||     ||||||||||||||||||||||||||||    
T  37545679 gactaaaaccaaaacgaggcatatttgcatggactaaaaccatattttag 37545630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 48609536 - 48609597
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaa 130  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||||    
T  48609536 ttacagtgactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaa 48609597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 3753271 - 3753215
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  3753271 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 3753215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 4323886 - 4323830
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||| ||||||||     ||||||| ||||||||||||||||||||    
T  4323886 ttacagagactaaaatcaaaacgaggcatatttgcagggactaaaaccatattttag 4323830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 6567438 - 6567494
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  6567438 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 6567494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 7350621 - 7350665
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||||||| ||||||| || |||||||||||    
T  7350621 cagagaccaaaaccaaaacgaggcatatttgcagggaccaaaaac 7350665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 12361069 - 12361013
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  12361069 ttacagggactaaaaccaaaacgaggcaaatttgcagggactaaaaccatattttag 12361013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 13770547 - 13770491
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  13770547 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 13770491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 14007547 - 14007491
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  14007547 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 14007491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 18302329 - 18302385
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  18302329 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 18302385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 18927892 - 18927848
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| ||||||||||||| |||||||| || |||||||||||    
T  18927892 cagagaccaaaaccaaaacgaaacatatttgcagggaccaaaaac 18927848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 19622706 - 19622650
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||    
T  19622706 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaaaa 19622650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 20948966 - 20949010
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||| ||||||||||| || |||||||||||    
T  20948966 cagagaccaaaaccaaaatgagacatatttgcacggaccaaaaac 20949010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 22919742 - 22919686
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  22919742 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 22919686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 24654118 - 24654154
Alignment:
Q  23 ctaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||| || |||||||||    
T  24654118 ctaaaaccaaaacgagacatatttgcagggaccaaaa 24654154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 28507230 - 28507186
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||||||| ||||||| || |||||||||||    
T  28507230 cagagaccaaaaccaaaacgaggcatatttgcagggaccaaaaac 28507186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 29072555 - 29072499
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  29072555 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 29072499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 35005693 - 35005749
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||    
T  35005693 gactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctaaaa 35005749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 35308053 - 35308109
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  35308053 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 35308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 45368548 - 45368492
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  45368548 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 45368492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 3808064 - 3808108
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||||||||||| || |||||||||||    
T  3808064 cagagactaaaaccaaaacgagacatatttgcagggaccaaaaac 3808108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 34877825 - 34877787
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  34877825 gactaaaaccaaaacgagacatatttacagggaccaaaa 34877787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 38186706 - 38186748
Alignment:
Q  18 agagactaaaaccaaaacgagacatatttacaaggaccaaaaa 60  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  38186706 agagactaaaaccaaaacgagacatatttgcagggaccaaaaa 38186748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 23816728 - 23816667
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaa 130  Q
    ||||||||||||||||||||||||     ||||||| |||||||||||||||||||| ||||    
T  23816728 ttacagagactaaaaccaaaacgagccatatttgcagggactaaaaccatattttagcctaa 23816667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 35665982 - 35665946
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| ||||||||||||||    
T  35665982 aaaaccaaaacgagacatatttgcaaggaccaaaaac 35665946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 1614615 - 1614572
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  1614615 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 1614572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 8144351 - 8144308
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  8144351 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 8144308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 23399920 - 23399963
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  23399920 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 23399963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 23676188 - 23676145
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  23676188 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 23676145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 25092216 - 25092173
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  25092216 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 25092173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 25988441 - 25988398
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  25988441 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 25988398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 30709588 - 30709631
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||||||||| || |||| ||||    
T  30709588 gcagagactaaaaccaaaacgagacatatttgcagggactaaaa 30709631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 39438793 - 39438754
Alignment:
Q  20 agactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  39438793 agactaaaaccaaaacgaggcatatttacagggaccaaaa 39438754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 39832964 - 39832901
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||    
T  39832964 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaaaa 39832901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 5354819 - 5354781
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  5354819 gactaaaaccaaaacgaggcatatttacagggaccaaaa 5354781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 6887212 - 6887174
Alignment:
Q  20 agactaaaaccaaaacgagacatatttacaaggaccaaa 58  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  6887212 agactaaaaccaaaacaagacatatttgcaaggaccaaa 6887174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6911133 - 6911095
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  6911133 gactaaaatcaaaacgagacatatttataaggaccaaaa 6911095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 6954913 - 6954871
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||| |||||| || |||||||||    
T  6954913 cagagactaaaaccaaaacgagatatatttgcagggaccaaaa 6954871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 20355522 - 20355488
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||| ||||||||||||    
T  20355522 aaaaccaaaacgagacatatttgcaaggaccaaaa 20355488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 27458450 - 27458412
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  27458450 gactaaaaccaaaacgagacatatttgcagggaccaaaa 27458412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 35104129 - 35104091
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  35104129 gactaaaaccaaaacgagacatatttgcagggaccaaaa 35104091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 35837975 - 35837937
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  35837975 gactaaaaccaaaacgagacatatttgcagggaccaaaa 35837937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 35838286 - 35838324
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  35838286 gactaaaaccaaaacgagacatatttgcagggaccaaaa 35838324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 39520679 - 39520717
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  39520679 gactaaaatcaaaacgagacatatttgcaaggaccaaaa 39520717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 44403198 - 44403236
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  44403198 gactaaaaccaaaacgagacatatttgcaaggactaaaa 44403236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 46759709 - 46759671
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  46759709 gactaaaaccaaaacgagacatatttgcagggaccaaaa 46759671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 46759891 - 46759929
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  46759891 gactaaaaccaaaacgagacatatttgcagggaccaaaa 46759929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 19005648 - 19005611
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  19005648 actaaaatcaaaacgagacatatttacagggaccaaaa 19005611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 31310423 - 31310362
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaa 130  Q
    ||||||||||||||||||||||||     ||||||| ||||||||| |||||||||| ||||    
T  31310423 ttacagagactaaaaccaaaacgagaaatatttgcagggactaaaatcatattttagcctaa 31310362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 37952997 - 37953038
Alignment:
Q  18 agagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||| ||||||||||||| |||| ||||    
T  37952997 agagactaaaaccaaaacaagacatatttacagggactaaaa 37953038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 38486528 - 38486491
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  38486528 actaaaactaaaacgagacatatttacagggaccaaaa 38486491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 1974067 - 1974011
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  1974067 ttacagggactaaaaccaaaacgaaacatatttgcagggactaaaaccatattttag 1974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 6847061 - 6847117
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| |||| |||||||||||||||    
T  6847061 ttacagagactaaaaccaaaacgaagcatatttgcagggaccaaaaccatattttag 6847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 10358310 - 10358366
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  10358310 ttacagggactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttag 10358366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 12894344 - 12894400
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  12894344 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 12894400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 17999663 - 17999719
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  17999663 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 17999719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 19005831 - 19005867
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  19005831 aaaaccaaaacgagacatatttgcagggaccaaaaac 19005867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 19561392 - 19561448
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  19561392 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 19561448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 19757806 - 19757750
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  19757806 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 19757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 21223463 - 21223407
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| ||||||||| ||||||||||    
T  21223463 ttacagagactaaaaccaaaacgaagcatatttgcagggactaaaatcatattttag 21223407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 22540178 - 22540222
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||| ||||||||||||||||||||  ||||||||||    
T  22540178 cagagaccaaaatcaaaacgagacatatttacagagaccaaaaac 22540222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 24717287 - 24717239
Alignment:
Q  13 ggagcagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| ||| |||| ||||| |||||||||||||| |||||||||||    
T  24717287 ggagcagggaccaaaatcaaaatgagacatatttacagggaccaaaaac 24717239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 28911848 - 28911904
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  28911848 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 28911904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 35210457 - 35210513
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  35210457 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 35210513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 35838031 - 35837995
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||| |||||||||||||| |||||||||||    
T  35838031 aaaaccaaaatgagacatatttacagggaccaaaaac 35837995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 44344731 - 44344787
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  44344731 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 44344787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 44841462 - 44841426
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  44841462 aaaaccaaaacgagacatatttgcagggaccaaaaac 44841426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 31602264 - 31602217
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaaacta 63  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||    
T  31602264 gcagcgactaaaaccaaaacgagacatatttgcagggaccaaaaacta 31602217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 20690788 - 20690746
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  20690788 cagagactaaaaccaaaacgagacatatttgcagggaccaaaa 20690746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 42207293 - 42207255
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  42207293 gactaaaaccaaaacgagacatatttacaaggactaaaa 42207255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 42553697 - 42553655
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  42553697 cagagactaaaaccaaaacgagacatatttgcagggaccaaaa 42553655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 2636725 - 2636682
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| ||||| || |||||||||    
T  2636725 gcagagactaaaaccaaaacgagacgtatttgcagggaccaaaa 2636682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 5917182 - 5917139
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  5917182 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 5917139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 5950234 - 5950171
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||    
T  5950234 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctaaaa 5950171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 9588560 - 9588599
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaaa 60  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  9588560 gactaaaaccaaaacgagacatatttgcagggaccaaaaa 9588599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 17070642 - 17070603
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaactat 64  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  17070642 aaaaccaaaacgagccatatttacagggaccaaaaactat 17070603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 19565523 - 19565480
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  19565523 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 19565480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 19685073 - 19685030
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  19685073 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 19685030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 29692802 - 29692739
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||    
T  29692802 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctaaaa 29692739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 45189 - 45151
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  45189 gactaaaaccaaaacgagacatatttgcagggaccaaaa 45151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 1381298 - 1381260
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  1381298 gactaaaaccaaaacgagacatatttgcagggaccaaaa 1381260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 6912806 - 6912844
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  6912806 gactaaaaccaaaacgagacatatttgcagggaccaaaa 6912844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 10744003 - 10744041
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  10744003 gactaaaaccaaaacgagacatatttgcaaggactaaaa 10744041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 14318096 - 14318058
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  14318096 gactaaaaccaaaacgagacatatttgcaaggactaaaa 14318058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 15916393 - 15916355
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaacta 63  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  15916393 aaaaccaaaacgagacatatttgtaaggaccaaaaacta 15916355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 18258476 - 18258514
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  18258476 gactaaaaccaaaacgagacatatttgcagggaccaaaa 18258514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 30888211 - 30888173
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  30888211 gactaaaaccaaaacgagacatatttgcagggaccaaaa 30888173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 31037683 - 31037745
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaa 131  Q
    ||||||||| ||||||||||||||     ||||||| |||||||||||||||||||| |||||    
T  31037683 ttacagagaataaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaaa 31037745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 35928407 - 35928445
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  35928407 gactaaaaccaaaacgagacatatttgcagggaccaaaa 35928445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 1286995 - 1287032
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  1286995 actaaaaccaaaatgagacatatttacagggaccaaaa 1287032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 30800792 - 30800857
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||| ||||    
T  30800792 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctagaata 30800857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 35609587 - 35609624
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| || |||||||||    
T  35609587 actaaaaccaaaacgagacatatttgcagggaccaaaa 35609624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 38554807 - 38554748
Alignment:
Q  74 ttacagagactaaaaccaaaacga---atttgcatggactaaaaccatattttagactaa 130  Q
    ||||||||||||||||||||||||   ||||||| |||  ||||||||||||||| ||||    
T  38554807 ttacagagactaaaaccaaaacgagatatttgcagggatcaaaaccatattttagcctaa 38554748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 38962856 - 38962819
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  38962856 actaaaaccaaaacgagacatatttacagggactaaaa 38962819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 45388 - 45432
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||| ||||||||||| || |||||||||||    
T  45388 cagagaccaaaaccaaaatgagacatatttgcagggaccaaaaac 45432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 2217552 - 2217496
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  2217552 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 2217496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 7075630 - 7075574
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  7075630 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 7075574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 9179651 - 9179595
Alignment:
Q  74 ttacagagactaaaaccaaaacgaat-----ttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||||     ||||| ||||||||||||||||||||    
T  9179651 ttacagggactaaaaccaaaacgaatcatatttgcaaggactaaaaccatattttag 9179595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 10409271 - 10409331
Alignment:
Q  77 cagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||||||||| ||||||||     ||||||| |||||||||||||||||||| ||||||    
T  10409271 cagagactaaaatcaaaacgaggcatatttgcagggactaaaaccatattttagcctaaaa 10409331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 10743996 - 10744052
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  10743996 ttacagggactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttag 10744052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 11799400 - 11799456
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  11799400 ttacagggactaaaaccaaaacgaggcatatttgcacggactaaaaccatattttag 11799456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 14318096 - 14318040
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||    
T  14318096 gactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagcctaaaa 14318040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 16038682 - 16038738
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| ||||||||| ||||||||||    
T  16038682 ttacagagactaaaaccaaaacgaggcatatttgcagggactaaaatcatattttag 16038738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 20661055 - 20661019
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||| | ||||||||||||||    
T  20661055 aaaaccaaaacgagacatatctgcaaggaccaaaaac 20661019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 20690791 - 20690735
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| |||| |||||||||||||||    
T  20690791 ttacagagactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttag 20690735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 26133355 - 26133411
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  26133355 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 26133411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 28863568 - 28863512
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  28863568 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 28863512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 28863780 - 28863836
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  28863780 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 28863836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 28871749 - 28871709
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||| ||||||||||| || |||||||||||    
T  28871749 gactaaaaccaaaatgagacatatttgcagggaccaaaaac 28871709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 29875674 - 29875730
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||    
T  29875674 gactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagcctaaaa 29875730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 30800552 - 30800496
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  30800552 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 30800496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 33335968 - 33336024
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  33335968 ttacagggactaaaaccaaaacgagtcatatttgcagggactaaaaccatattttag 33336024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 35609361 - 35609305
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     |||||||||||| |||||||||||||||    
T  35609361 ttacagggactaaaaccaaaacgatgcatatttgcatggaccaaaaccatattttag 35609305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 35877003 - 35877039
Alignment:
Q  23 ctaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||| || |||||||||    
T  35877003 ctaaaaccaaaacgagacatatttgcagggaccaaaa 35877039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 36577780 - 36577724
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  36577780 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 36577724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 36578025 - 36578081
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  36578025 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 36578081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 38786217 - 38786161
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  38786217 ttacagggactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttag 38786161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 40029439 - 40029495
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  40029439 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 40029495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 40167950 - 40168006
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     |||||||||||||||||| |||||||||    
T  40167950 ttacagggactaaaaccaaaacgagacatatttgcatggactaaaacaatattttag 40168006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 25358484 - 25358527
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  25358484 gcagggactaaaaccaaaacgagacatatttacagggaccaaaa 25358527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 22584342 - 22584300
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  22584342 cagagactaaaaccaaaacgagacatatttgcaaggactaaaa 22584300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 47022791 - 47022753
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  47022791 gactaaaaccaaaacgagacatatttgcaaggaccaaaa 47022753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 54208770 - 54208812
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  54208770 cagagactaaaaccaaaacgagacatatttgcagggaccaaaa 54208812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 47532622 - 47532659
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  47532622 actaaaaccaaaacgagacatatttgcaaggaccaaaa 47532659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 2322317 - 2322361
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||||||||||||||| || |||||||||||    
T  2322317 cagagacgaaaaccaaaacgagacatatttgcagggaccaaaaac 2322361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 22099854 - 22099910
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  22099854 ttacagagactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 22099910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 22584345 - 22584289
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  22584345 ttacagagactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttag 22584289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 51545687 - 51545631
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  51545687 ttacagagactaaaaccaaaacgaggtatatttgcagggactaaaaccatattttag 51545631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 43231144 - 43231101
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  43231144 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 43231101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 52543470 - 52543435
Alignment:
Q  24 taaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||| ||||||||||||    
T  52543470 taaaaccaaaacgagacatatttgcaaggaccaaaa 52543435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 13073810 - 13073772
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  13073810 gactaaaaccaaaacgagacatatttgcagggaccaaaa 13073772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 13631279 - 13631241
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  13631279 gactaaaaccaaaacgagacatatttgcagggaccaaaa 13631241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 13764756 - 13764794
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  13764756 gactaaaaccaaaacgaaacatatttacagggaccaaaa 13764794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 14791755 - 14791793
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  14791755 gactaaaaccaaaacgagacatatttgcagggaccaaaa 14791793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 19903604 - 19903642
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  19903604 gactaaaaccaaaacgagacatatttgcagggaccaaaa 19903642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 20292041 - 20291999
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||| ||||||| || |||||||||    
T  20292041 cagagactaaaaccaaaacgaggcatatttgcagggaccaaaa 20291999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 22099857 - 22099899
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||| ||||    
T  22099857 cagagactaaaaccaaaacgagacatatttgcagggactaaaa 22099899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 25423975 - 25423937
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  25423975 gactaaaaccaaaacgagacatatttgcagggaccaaaa 25423937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 25424261 - 25424299
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  25424261 gactaaaaccaaaacgagacatatttgcagggaccaaaa 25424299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 29420486 - 29420524
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  29420486 gactaaaaccaaaacgagacatatttgcagggaccaaaa 29420524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 35420652 - 35420690
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  35420652 gactaaaaccaaatcgagacatatttgcaaggaccaaaa 35420690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 35464069 - 35464031
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  35464069 gactaaaaccaaaacgagacatatttgcagggaccaaaa 35464031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 51708748 - 51708690
Alignment:
Q  77 cagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaa 130  Q
    |||||||||||||||||||||     ||||||| |||||||||||||||||||| ||||    
T  51708748 cagagactaaaaccaaaacgagccatatttgcagggactaaaaccatattttagcctaa 51708690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 52442041 - 52442079
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  52442041 gactaaaaccaaaacgagacatatttgcaaggactaaaa 52442079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 42823826 - 42823789
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| || |||||||||    
T  42823826 actaaaaccaaaacgagacatatttgcagggaccaaaa 42823789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 53915997 - 53916034
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| || |||||||||    
T  53915997 actaaaaccaaaacgagacatatttgcagggaccaaaa 53916034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 2034743 - 2034783
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||| ||||||||||| || |||||||||||    
T  2034743 gactaaaaccaaaatgagacatatttgcagggaccaaaaac 2034783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 4279079 - 4279015
Alignment:
Q  75 tacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    ||||| |||||||||||||||||     ||||||| || ||||||||||||||||| ||||||||    
T  4279079 tacagggactaaaaccaaaacgagatatatttgcaggggctaaaaccatattttagcctaaaata 4279015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 8760723 - 8760779
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  8760723 ttacagggactaaaaccaaaacgagccatatttgcaaggactaaaaccatattttag 8760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 8905128 - 8905164
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  8905128 aaaaccaaaacgagacatatttgcagggaccaaaaac 8905164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 13064407 - 13064463
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  13064407 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 13064463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 13073875 - 13073831
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| ||||||||||||||| |||||| || |||||||||||    
T  13073875 cagagacgaaaaccaaaacgagatatatttgcagggaccaaaaac 13073831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 13479553 - 13479609
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  13479553 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 13479609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 14594460 - 14594496
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  14594460 aaaaccaaaacgagacatatttgcagggaccaaaaac 14594496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 16712633 - 16712689
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  16712633 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 16712689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 20144526 - 20144490
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  20144526 aaaaccaaaacgagacatatttgcagggaccaaaaac 20144490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 26314097 - 26314061
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  26314097 aaaaccaaaacgagacatattttcagggaccaaaaac 26314061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 28809069 - 28809013
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  28809069 ttacagggactaaaaccaaaacgatacatatttgcaaggactaaaaccatattttag 28809013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 41439842 - 41439810
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttaca 49  Q
    ||||||||||||||||||||||| |||||||||    
T  41439842 cagagactaaaaccaaaacgagaaatatttaca 41439810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 41439895 - 41439859
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||| | ||||||||||||||||||||    
T  41439895 aaaaccaaaacgaggcttatttacaaggaccaaaaac 41439859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 43368523 - 43368467
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  43368523 ttacagggactaaaaccaaaacgaaacatatttgcagggactaaaaccatattttag 43368467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 44925538 - 44925498
Alignment:
Q  19 gagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||| || ||| |||||    
T  44925538 gagactaaaaccaaaacgagacatatttgcagggatcaaaa 44925498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 45474538 - 45474594
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||||||||||||||||| ||||     |||||| ||||||||||||||||||||    
T  45474538 ttacagagactaaaaccaaagcgaagcatatttgcagggactaaaaccatattttag 45474594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 52017563 - 52017507
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  52017563 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 52017507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 52017812 - 52017868
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  52017812 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 52017868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 52442034 - 52442090
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  52442034 ttacagggactaaaaccaaaacgagacatatttgcaaggactaaaaccatattttag 52442090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 53307869 - 53307829
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaa 57  Q
    ||||||| |||||||||||||||||||||| || |||||||    
T  53307869 cagagacgaaaaccaaaacgagacatatttgcagggaccaa 53307829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 53717116 - 53717172
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  53717116 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 53717172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 54903369 - 54903405
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  54903369 aaaaccaaaacgagacatatttgcagggaccaaaaac 54903405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 55072447 - 55072391
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  55072447 ttacagggactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttag 55072391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 1295235 - 1295196
Alignment:
Q  20 agactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  1295235 agactaaaaccaaaacgagacatatttacatggaccaaaa 1295196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 31644896 - 31644854
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  31644896 cagagactaaaaccaaaacgagacatatttgcagggaccaaaa 31644854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 44559354 - 44559396
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  44559354 cagagactaaaaccaaaacgagacatatttgcagggaccaaaa 44559396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 5164381 - 5164425
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||||||||||||||| || |||||||||||    
T  5164381 cagagaccaaaaccaaaacgagacatatttgcatggaccaaaaac 5164425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 44985679 - 44985615
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaat 133  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| |||||||    
T  44985679 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagtctaaaat 44985615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 2481249 - 2481206
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| |||| |||||||    
T  2481249 gcagggactaaaaccaaaacgagacatatttgcaagtaccaaaa 2481206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 20131373 - 20131330
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  20131373 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 20131330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 33576061 - 33576104
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  33576061 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 33576104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 41451893 - 41451850
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  41451893 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 41451850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 2265346 - 2265384
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  2265346 gactaaaaccaaaacgagacatatttgcaaggactaaaa 2265384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 3172481 - 3172519
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  3172481 gactaaaaccaaaacgaggcatatttgcaaggaccaaaa 3172519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 4424134 - 4424172
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  4424134 gactaaaaccaaaacgagacatatttgcagggaccaaaa 4424172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 4794418 - 4794460
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||||||||  | |||||||||    
T  4794418 cagagactaaaaccaaaacgagacatatttgtagggaccaaaa 4794460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 13215111 - 13215073
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  13215111 gactaaaaccaaaacgagacatatttgcagggaccaaaa 13215073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 17912504 - 17912462
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||| ||||    
T  17912504 cagagactaaaaccaaaacgagacatatttgcagggactaaaa 17912462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 20939274 - 20939312
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  20939274 gactaaaaccaaaacgagacatatttgcagggaccaaaa 20939312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 23990145 - 23990183
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  23990145 gactaaaaccaaaacgagacatatttgcaaggactaaaa 23990183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 25705136 - 25705098
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  25705136 gactaaaaccaaaacgagacatatttgcagggaccaaaa 25705098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 27311018 - 27311076
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||||||||||||||     |||||||||||||||||||||||||||| ||| ||||    
T  27311018 gactaaaaccaaaacgaggcatatttgcatggactaaaaccatattttagcctacaata 27311076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 29182223 - 29182181
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||| || |||||||| ||||||||||||    
T  29182223 cagagactaaaaccaaaatgaaacatatttgcaaggaccaaaa 29182181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 36806845 - 36806883
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  36806845 gactaaaaccaaaacgagacatatttgcagggaccaaaa 36806883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 37228788 - 37228746
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||| |||||||| || |||||||||    
T  37228788 cagagactaaaaccaaaacgatacatatttgcagggaccaaaa 37228746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 38639467 - 38639409
Alignment:
Q  77 cagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaa 130  Q
    |||||||||||||||||||||     ||||||| |||||||||||||||||||| ||||    
T  38639467 cagagactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaa 38639409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 38639467 - 38639425
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||| ||||    
T  38639467 cagagactaaaaccaaaacgagacatatttgcagggactaaaa 38639425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 42695919 - 42695881
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  42695919 gactaaaaccaaaacgagacatatttgcagggaccaaaa 42695881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 44559113 - 44559075
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  44559113 gactaaaaccaaaacgagacatatttgcagggaccaaaa 44559075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 44559302 - 44559407
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaactatnnnnnnnnnttacagagactaaaaccaaaacga-----atttgcatggactaaaaccata 119  Q
    |||||||||| ||||||||||| || ||||||||||| |          ||||||||||||||||||||||||     ||||||| |||| |||||||||    
T  44559302 aaaaccaaaatgagacatatttgcagggaccaaaaacaacaaaagaattttacagagactaaaaccaaaacgagacatatttgcagggaccaaaaccata 44559401  T
Q  120 ttttag 125  Q
    ||||||    
T  44559402 ttttag 44559407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 45442645 - 45442683
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  45442645 gactaaaaccaaaacgagacatatttgcaaggactaaaa 45442683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 33732920 - 33732855
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| || |||||    
T  33732920 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttagccttaaata 33732855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 36815785 - 36815822
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| || |||||||||    
T  36815785 actaaaaccaaaacgagacatatttgcatggaccaaaa 36815822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 43592104 - 43592043
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaa 130  Q
    |||||| |||||||||||||||||     ||||||| |||||||||||||||||||| ||||    
T  43592104 ttacagggactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttagcctaa 43592043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 1138089 - 1138053
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  1138089 aaaaccaaaacgagacatatttgcagggaccaaaaac 1138053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Complemental strand, 3671032 - 3671000
Alignment:
Q  98 atttgcatggactaaaaccatattttagactaa 130  Q
    |||||||||||||||||||||||||||| ||||    
T  3671032 atttgcatggactaaaaccatattttagcctaa 3671000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 3838206 - 3838262
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  3838206 ttacagggactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttag 3838262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 11713543 - 11713487
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  11713543 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 11713487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 11788168 - 11788124
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||| |||||||||||||||||||||| ||  ||||||||||    
T  11788168 cagagaccaaaaccaaaacgagacatatttgcagcgaccaaaaac 11788124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 11788358 - 11788414
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  11788358 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 11788414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 24483833 - 24483889
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  24483833 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 24483889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 29865453 - 29865509
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  29865453 ttacagggactaaaaccaaaacgaagcatatttgcaaggactaaaaccatattttag 29865509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 31644899 - 31644843
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| |||| |||||||||||||||    
T  31644899 ttacagagactaaaaccaaaacgagacatatttgcagggaccaaaaccatattttag 31644843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 36622308 - 36622252
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  36622308 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 36622252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 36622526 - 36622582
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||| ||||||||||||||||     ||||||| ||||||||||||||||||||    
T  36622526 ttacagaaactaaaaccaaaacgatgcatatttgcagggactaaaaccatattttag 36622582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 49
Target Start/End: Complemental strand, 36815539 - 36815511
Alignment:
Q  21 gactaaaaccaaaacgagacatatttaca 49  Q
    |||||||||||||||||||||||||||||    
T  36815539 gactaaaaccaaaacgagacatatttaca 36815511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 37228791 - 37228735
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| |||| |||||||||||||||    
T  37228791 ttacagagactaaaaccaaaacgatacatatttgcagggaccaaaaccatattttag 37228735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 40302281 - 40302337
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  40302281 ttacagggactaaaaccaaaacgagccatatttgcagggactaaaaccatattttag 40302337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 41693732 - 41693676
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  41693732 ttacagggactaaaaccaaaacgaaacatatttgcagggactaaaaccatattttag 41693676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 41791254 - 41791310
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    ||||||||||| |||||||||||||     |||||| ||||||||||||||||||||    
T  41791254 ttacagagacttaaaccaaaacgaagcatatttgcagggactaaaaccatattttag 41791310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 43597212 - 43597148
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaat 133  Q
    |||||| |||||||||||||||||     ||||||| | |||||||||||||||||| |||||||    
T  43597212 ttacagggactaaaaccaaaacgaggcatatttgcaggaactaaaaccatattttagcctaaaat 43597148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 9175063 - 9175025
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  9175063 gactaaaaccaaaacgagacatatttgcaaggaccaaaa 9175025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 9175316 - 9175358
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  9175316 cagagactaaaaccaaaacgaggcatatttacagggaccaaaa 9175358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 7272478 - 7272422
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  7272478 ttacagagactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 7272422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 18549259 - 18549203
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  18549259 ttacagagactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttag 18549203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 1778620 - 1778577
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  1778620 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 1778577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 2728288 - 2728245
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  2728288 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 2728245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3512210 - 3512253
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  3512210 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 3512253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 7326142 - 7326099
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||    
T  7326142 gcagggactaaaaccaaaacgaggcatatttgcaaggaccaaaa 7326099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 7420286 - 7420243
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  7420286 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 7420243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 9175264 - 9175378
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaactatnnnnnnnnnttacagagactaaaaccaaaacga-----atttgcatggactaaaaccata 119  Q
    |||||||||||||||||||||| || ||||||||||| |          ||||||||||||||||||||||||     |||| || |||| |||||||||    
T  9175264 aaaaccaaaacgagacatatttgcagggaccaaaaacaacaaaaaaaatttacagagactaaaaccaaaacgaggcatatttacagggaccaaaaccata 9175363  T
Q  120 ttttagactaaaata 134  Q
    |||||  ||||||||    
T  9175364 ttttaacctaaaata 9175378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 11019576 - 11019533
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  11019576 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 11019533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 11976680 - 11976723
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  11976680 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 11976723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 32725963 - 32725920
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  32725963 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 32725920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 34963608 - 34963651
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  34963608 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 34963651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 35097384 - 35097341
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  35097384 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 35097341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 35346685 - 35346642
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  35346685 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 35346642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 35346942 - 35346985
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  35346942 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 35346985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 7185953 - 7185991
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  7185953 gactaaaaccaaaacgagacatatttgcagggaccaaaa 7185991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 7272475 - 7272433
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||||| || |||| ||||    
T  7272475 cagagactaaaaccaaaacgagacatatttgcagggactaaaa 7272433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 8298638 - 8298600
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  8298638 gactaaaaccaaaacgagacatatttgcagggaccaaaa 8298600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 8298924 - 8298962
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  8298924 gactaaaaccaaaacgagacatatttgcagggaccaaaa 8298962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 10337170 - 10337132
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  10337170 gactaaaaccaaaacgagacatatttgcagggaccaaaa 10337132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 13232249 - 13232211
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  13232249 gactaaaaccaaaacgagacatatttgcagggaccaaaa 13232211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 14489022 - 14489060
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  14489022 gactaaaaccaaaacgagacatatttgcagggaccaaaa 14489060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 24090433 - 24090475
Alignment:
Q  17 cagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||| ||||||| || |||||||||    
T  24090433 cagagactaaaaccaaaacgaggcatatttgcagggaccaaaa 24090475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 42133103 - 42133141
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  42133103 gactaaaaccaaaacgagacatatttgcagggaccaaaa 42133141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 1525864 - 1525811
Alignment:
Q  77 cagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  1525864 cagagactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 1525811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 2356193 - 2356222
Alignment:
Q  17 cagagactaaaaccaaaacgagacatattt 46  Q
    ||||||||||||||||||||||||||||||    
T  2356193 cagagactaaaaccaaaacgagacatattt 2356222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 2811727 - 2811768
Alignment:
Q  18 agagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||||||| || ||| |||||    
T  2811727 agagactaaaaccaaaacgagacatatttgcagggatcaaaa 2811768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 9496391 - 9496354
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| || |||||||||    
T  9496391 actaaaaccaaaacgagacatatttgcagggaccaaaa 9496354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 25600280 - 25600243
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| || |||||||||    
T  25600280 actaaaaccaaaacgagacatatttgcagggaccaaaa 25600243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 38930352 - 38930315
Alignment:
Q  22 actaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  38930352 actaaaaccaaaacgagacatatttacagggactaaaa 38930315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 6146891 - 6146947
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  6146891 ttacagggactaaaaccaaaacgatgcatatttgcagggactaaaaccatattttag 6146947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 13779428 - 13779464
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  13779428 aaaaccaaaacgagacatatttgcagggaccaaaaac 13779464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 16789311 - 16789367
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  16789311 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 16789367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 23939658 - 23939618
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||||||||||||||| |||||| || |||||||||||    
T  23939658 gactaaaaccaaaacgagatatatttgcagggaccaaaaac 23939618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 24090430 - 24090486
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    ||||||||||||||||||||||||     ||||||| |||| |||||||||||||||    
T  24090430 ttacagagactaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 24090486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 24954959 - 24955015
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaa 132  Q
    |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||    
T  24954959 gactaaaaccaaaacgagtcatatttgcagggactaaaaccatattttagcctaaaa 24955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 27341533 - 27341589
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  27341533 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 27341589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 29158412 - 29158356
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  29158412 ttacagggactaaaaccaaaacgagacatatttgcagggactaaaaccatattttag 29158356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 29488052 - 29488108
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  29488052 ttacagggactaaaaccaaaacgatgcatatttgcagggactaaaaccatattttag 29488108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 40844214 - 40844158
Alignment:
Q  74 ttacagagactaaaaccaaaacgaa-----tttgcatggactaaaaccatattttag 125  Q
    |||||| ||||||||||||||||||     |||||| ||||||||||||||||||||    
T  40844214 ttacagggactaaaaccaaaacgaagcatatttgcagggactaaaaccatattttag 40844158  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 43477221 - 43477165
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  43477221 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 43477165  T

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Target: scaffold0056 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 50022 - 50065
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  50022 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 50065  T

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Target: scaffold0056; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 55123 - 55166
Alignment:
Q  16 gcagagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  55123 gcagggactaaaaccaaaacgagacatatttgcagggaccaaaa 55166  T

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Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 49971 - 50007
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  49971 aaaaccaaaatgagacatatttgcaaggaccaaaaac 50007  T

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Target: scaffold0056; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 54873 - 54817
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  54873 ttacagggactaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttag 54817  T

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Target: scaffold0056; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 55072 - 55108
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  55072 aaaaccaaaatgagacatatttgcaaggaccaaaaac 55108  T

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Target: scaffold0326 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 4092 - 4034
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||||    
T  4092 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaaaata 4034  T

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Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 19274 - 19216
Alignment:
Q  81 gactaaaaccaaaacga-----atttgcatggactaaaaccatattttagactaaaata 134  Q
    |||||||||||||||||     ||||||| |||||||||||||||||||| ||||||||    
T  19274 gactaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctaaaata 19216  T

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Target: scaffold0160 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 27313 - 27351
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  27313 gactaaaaccaaaacgagacatatttgcagggaccaaaa 27351  T

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Target: scaffold0119 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 17048 - 17082
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    ||||||||||||||||||||||||| |||||||||    
T  17048 aaaaccaaaacgagacatatttacatggaccaaaa 17082  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 47976 - 47938
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  47976 gactaaaaccaaaacgagacatatttgcagggaccaaaa 47938  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 222918 - 222882
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    |||||||||||||||||||||| || |||||||||||    
T  222918 aaaaccaaaacgagacatatttgcagggaccaaaaac 222882  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 148231 - 148269
Alignment:
Q  21 gactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||||||||||||||||| || |||||||||    
T  148231 gactaaaaccaaaacgagacatatttgcagggaccaaaa 148269  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 4025 - 4066
Alignment:
Q  18 agagactaaaaccaaaacgagacatatttacaaggaccaaaa 59  Q
    |||||||||||| |||||||||||||||| || |||||||||    
T  4025 agagactaaaactaaaacgagacatatttgcagggaccaaaa 4066  T

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Target: scaffold1001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 2836 - 2780
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  2836 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 2780  T

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Target: scaffold0535 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 8790 - 8734
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  8790 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 8734  T

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Target: scaffold0535; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 8970 - 9026
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  8970 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 9026  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 34978 - 35014
Alignment:
Q  25 aaaaccaaaacgagacatatttacaaggaccaaaaac 61  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  34978 aaaaccaaaacgagacatatttacagggatcaaaaac 35014  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 3860 - 3916
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  3860 ttacagggactaaaaccaaaacgatgcatatttgcagggactaaaaccatattttag 3916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 366215 - 366271
Alignment:
Q  74 ttacagagactaaaaccaaaacga-----atttgcatggactaaaaccatattttag 125  Q
    |||||| |||||||||||||||||     ||||||| ||||||||||||||||||||    
T  366215 ttacagggactaaaaccaaaacgaggcatatttgcagggactaaaaccatattttag 366271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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