View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12178_high_3 (Length: 286)
Name: NF12178_high_3
Description: NF12178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12178_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 3 - 271
Target Start/End: Complemental strand, 48286918 - 48286650
Alignment:
| Q |
3 |
cacagacaacagtaacaccaaccatcatggatttccaaccttgaaccctaacactcgttcttgttttcacctcaacactaggcaccaaagctttactact |
102 |
Q |
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|||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286918 |
cacaaacaacagtaacaccaatcatcatggatttccaaccttgaaccctaacactcgttcttgttttcacctcaacactaggcaccaaagctttactact |
48286819 |
T |
|
| Q |
103 |
aaaagcacttttcaacttcctcctttgtttctcattcaactcctcatgtctaaccttcgtttccgccttcaccgccgtcttattcttcaccttcacatca |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
48286818 |
aaaagcacttttcaacttcctcctttgtttctcattcaactcctcatgtctaaccttcgtttcccccttcaccgccgtcttattcttcaccttcacatca |
48286719 |
T |
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| Q |
203 |
aacgcagccaccttcgtcgatcctaaattcaaatcaccattatctgcccatatctgaacactactttgt |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286718 |
aacgcagccaccttcgtcgatcctaaattcaaatcaccattatctgcccatatctgaacactactttgt |
48286650 |
T |
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