View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12178_high_4 (Length: 267)
Name: NF12178_high_4
Description: NF12178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12178_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 46045030 - 46045271
Alignment:
| Q |
19 |
gaatatgcattggttgctgctcttcgcaacatatttttatcctatgtttttacaatataatcatacacattgaggtaaaatcttgattaacaattatgaa |
118 |
Q |
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| T |
46045030 |
gaatatgcattggttgctgctcttcgcaacatatttttatcctatgtttttacaatataatcatacacattgaggtaaaatcttgattaacaattatgaa |
46045129 |
T |
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| Q |
119 |
gataaataaaaccaacaaggtaacacagataataaacacatgtaaaaaatcttgttcaaaagaaaaacaaatgttgatgacaatgccttcttgtggggta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46045130 |
gataaataaaaccaacaaggtaacacagataataaacacatgtaaaaaatcttgttcaaaagaaaaacaaatgttgatgacaatgccttcttgtggggta |
46045229 |
T |
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| Q |
219 |
gatatgaagaggaggatacttcgccacaatcataggtctgtg |
260 |
Q |
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||||||||||||||||||||||||| ||||||||||| |||| |
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| T |
46045230 |
gatatgaagaggaggatacttcgccccaatcataggtgtgtg |
46045271 |
T |
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