View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12179_high_5 (Length: 243)

Name: NF12179_high_5
Description: NF12179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12179_high_5
NF12179_high_5
[»] chr3 (32 HSPs)
chr3 (18-232)||(11047116-11047330)
chr3 (18-232)||(52856991-52857205)
chr3 (58-232)||(49220260-49220434)
chr3 (18-202)||(46453012-46453196)
chr3 (58-225)||(31071093-31071259)
chr3 (18-209)||(26246906-26247097)
chr3 (18-232)||(28253580-28253792)
chr3 (19-209)||(4953263-4953453)
chr3 (117-232)||(49220129-49220244)
chr3 (117-234)||(31070962-31071078)
chr3 (72-232)||(26988820-26988980)
chr3 (117-234)||(18733955-18734071)
chr3 (20-209)||(43464850-43465039)
chr3 (18-209)||(24244603-24244793)
chr3 (117-209)||(13301884-13301976)
chr3 (117-209)||(13312540-13312632)
chr3 (118-232)||(28253458-28253572)
chr3 (117-210)||(24244502-24244595)
chr3 (118-210)||(26247108-26247200)
chr3 (119-225)||(11046990-11047095)
chr3 (117-210)||(43465049-43465142)
chr3 (117-209)||(52857213-52857305)
chr3 (18-64)||(49220252-49220298)
chr3 (19-64)||(18734079-18734124)
chr3 (118-202)||(46452920-46453004)
chr3 (118-209)||(4953162-4953253)
chr3 (194-232)||(11046942-11046980)
chr3 (58-108)||(18734086-18734136)
chr3 (26-64)||(31071093-31071131)
chr3 (117-209)||(6276096-6276188)
chr3 (19-87)||(6276207-6276275)
chr3 (153-209)||(20184486-20184542)
[»] chr8 (16 HSPs)
chr8 (19-241)||(36194766-36194988)
chr8 (18-241)||(12654707-12654930)
chr8 (19-209)||(21015071-21015261)
chr8 (18-209)||(10134646-10134837)
chr8 (18-230)||(13557157-13557368)
chr8 (117-241)||(31933508-31933632)
chr8 (18-234)||(31933286-31933501)
chr8 (117-241)||(12654938-12655062)
chr8 (117-241)||(36194633-36194757)
chr8 (117-231)||(13557377-13557490)
chr8 (58-232)||(18847382-18847555)
chr8 (66-209)||(40832174-40832319)
chr8 (117-210)||(10134845-10134938)
chr8 (117-210)||(40832343-40832436)
chr8 (151-225)||(18847605-18847679)
chr8 (18-64)||(18847517-18847563)
[»] chr7 (34 HSPs)
chr7 (18-243)||(32871748-32871971)
chr7 (19-232)||(4132976-4133189)
chr7 (34-232)||(43392313-43392511)
chr7 (25-241)||(18417362-18417577)
chr7 (72-225)||(8462869-8463022)
chr7 (118-232)||(6000494-6000608)
chr7 (72-225)||(6000639-6000792)
chr7 (18-209)||(26041645-26041835)
chr7 (18-209)||(30283956-30284145)
chr7 (117-234)||(32871622-32871740)
chr7 (19-164)||(37691834-37691979)
chr7 (58-209)||(472744-472895)
chr7 (117-224)||(37691718-37691825)
chr7 (72-209)||(24485728-24485864)
chr7 (118-219)||(32389680-32389781)
chr7 (66-202)||(24846289-24846425)
chr7 (117-208)||(8463052-8463143)
chr7 (147-241)||(25731924-25732018)
chr7 (117-210)||(472635-472728)
chr7 (117-210)||(26041544-26041637)
chr7 (117-210)||(30284153-30284246)
chr7 (118-210)||(24846450-24846542)
chr7 (18-96)||(16963363-16963441)
chr7 (117-209)||(16962882-16962974)
chr7 (119-202)||(16963451-16963534)
chr7 (18-64)||(24485706-24485752)
chr7 (148-232)||(7685230-7685314)
chr7 (181-225)||(16833477-16833521)
chr7 (194-236)||(4132906-4132948)
chr7 (18-64)||(6000617-6000663)
chr7 (18-64)||(16833583-16833629)
chr7 (161-239)||(21709166-21709244)
chr7 (118-208)||(24485608-24485698)
chr7 (19-64)||(472737-472782)
[»] chr1 (34 HSPs)
chr1 (19-241)||(30049921-30050143)
chr1 (19-232)||(39277597-39277810)
chr1 (33-225)||(19920527-19920719)
chr1 (18-232)||(28990314-28990527)
chr1 (19-232)||(45822802-45823014)
chr1 (19-225)||(10394269-10394475)
chr1 (18-225)||(16958864-16959067)
chr1 (36-225)||(7714194-7714383)
chr1 (19-234)||(52285191-52285406)
chr1 (118-232)||(39277820-39277934)
chr1 (117-232)||(28990535-28990650)
chr1 (117-232)||(10394145-10394260)
chr1 (118-225)||(45823025-45823132)
chr1 (118-232)||(47422099-47422213)
chr1 (72-221)||(15158349-15158497)
chr1 (117-225)||(27334367-27334475)
chr1 (72-232)||(47421906-47422066)
chr1 (66-209)||(10719510-10719653)
chr1 (117-221)||(16959075-16959179)
chr1 (118-234)||(30050153-30050269)
chr1 (118-225)||(36076907-36077014)
chr1 (19-209)||(35814227-35814416)
chr1 (117-222)||(52285079-52285183)
chr1 (117-225)||(49186022-49186130)
chr1 (147-225)||(36077121-36077199)
chr1 (117-210)||(10719393-10719486)
chr1 (118-234)||(7714410-7714523)
chr1 (18-102)||(5683024-5683108)
chr1 (18-64)||(27334483-27334529)
chr1 (19-64)||(15158473-15158518)
chr1 (118-193)||(5682940-5683015)
chr1 (18-64)||(36077023-36077069)
chr1 (18-64)||(49186138-49186184)
chr1 (117-202)||(35814133-35814218)
[»] chr4 (32 HSPs)
chr4 (19-232)||(17254585-17254798)
chr4 (19-209)||(51399254-51399444)
chr4 (19-202)||(35016828-35017011)
chr4 (22-232)||(24039391-24039601)
chr4 (117-241)||(55620199-55620323)
chr4 (117-241)||(55627503-55627627)
chr4 (19-209)||(14251234-14251424)
chr4 (117-232)||(1113225-1113340)
chr4 (72-232)||(36215664-36215824)
chr4 (19-209)||(44304121-44304311)
chr4 (117-225)||(24039272-24039380)
chr4 (58-234)||(29430083-29430259)
chr4 (119-232)||(8607791-8607904)
chr4 (72-232)||(48018625-48018785)
chr4 (72-232)||(1113370-1113529)
chr4 (117-241)||(29429945-29430067)
chr4 (66-209)||(49905766-49905909)
chr4 (18-109)||(51024585-51024676)
chr4 (117-210)||(14251433-14251526)
chr4 (117-210)||(44304019-44304112)
chr4 (118-231)||(51024464-51024576)
chr4 (118-186)||(55561222-55561290)
chr4 (118-208)||(43099363-43099452)
chr4 (117-210)||(35016727-35016820)
chr4 (118-225)||(55561041-55561148)
chr4 (18-64)||(29430075-29430121)
chr4 (25-93)||(17728799-17728867)
chr4 (117-209)||(51399453-51399545)
chr4 (147-202)||(36215884-36215939)
chr4 (194-236)||(17254514-17254556)
chr4 (18-63)||(36215801-36215846)
chr4 (20-60)||(43099479-43099519)
[»] chr5 (15 HSPs)
chr5 (18-209)||(14662500-14662691)
chr5 (25-209)||(35463708-35463892)
chr5 (18-225)||(18968531-18968736)
chr5 (19-209)||(18508662-18508851)
chr5 (117-241)||(8417565-8417689)
chr5 (18-170)||(8417697-8417849)
chr5 (72-232)||(9989971-9990130)
chr5 (117-223)||(36207413-36207519)
chr5 (145-225)||(18968767-18968847)
chr5 (117-210)||(1983486-1983579)
chr5 (118-219)||(9990161-9990262)
chr5 (117-210)||(17115556-17115649)
chr5 (117-210)||(18508561-18508654)
chr5 (117-207)||(14662403-14662492)
chr5 (18-78)||(17115488-17115548)
[»] chr2 (18 HSPs)
chr2 (19-225)||(12702066-12702271)
chr2 (19-209)||(25945864-25946054)
chr2 (18-243)||(2217744-2217969)
chr2 (117-224)||(12701950-12702057)
chr2 (34-194)||(36065267-36065427)
chr2 (19-209)||(16203482-16203672)
chr2 (117-232)||(12261061-12261176)
chr2 (117-225)||(21304350-21304457)
chr2 (117-209)||(38978852-38978944)
chr2 (34-196)||(10373066-10373228)
chr2 (117-210)||(10373252-10373345)
chr2 (66-195)||(16581389-16581519)
chr2 (117-210)||(16203680-16203773)
chr2 (117-210)||(36065451-36065544)
chr2 (117-220)||(3568500-3568603)
chr2 (18-88)||(12260983-12261053)
chr2 (117-202)||(25946063-25946148)
chr2 (181-225)||(2217644-2217688)
[»] scaffold0220 (2 HSPs)
scaffold0220 (39-209)||(26001-26171)
scaffold0220 (117-210)||(26200-26293)
[»] chr6 (6 HSPs)
chr6 (18-207)||(959147-959335)
chr6 (18-225)||(1211416-1211624)
chr6 (118-232)||(1211633-1211747)
chr6 (146-210)||(959046-959110)
chr6 (172-234)||(12825768-12825830)
chr6 (172-209)||(21611953-21611990)
[»] scaffold0009 (2 HSPs)
scaffold0009 (120-224)||(233672-233776)
scaffold0009 (117-241)||(233539-233663)
[»] scaffold0130 (1 HSPs)
scaffold0130 (19-219)||(25392-25592)


Alignment Details
Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 11047116 - 11047330
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| |||||||  |||||||||||| |||||||||| ||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       |    
T  11047116 cgttaaattttggtcgcttaacttatttaattagtattaatttggtcccttagcttatttaattagtattagtttggtccctaaacttaacgtttttttg 11047215  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  11047216 aattaaattaacagaaatgaccaaactaatactttaaataaagttaagggacctaaacggaccttttattacttatgggaccaaaccgatacttgaaatc 11047315  T
Q  218 aagttaagagaccaa 232  Q
    |||||||| ||||||    
T  11047316 aagttaagggaccaa 11047330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 52857205 - 52856991
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||||  ||||  ||||||||||||||||||||||||| ||||| ||||||       |    
T  52857205 cgttaaattttggtcccttaacttatttaattagtattagtttggttccttaacttatttaattagtattagtttggtccctaaacttaacgtttttttg 52857106  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||||  ||||||||||||||||||| | | |||||||||  |||||||| |||||||||||||||||||||||||||     
T  52857105 aattaaattaacagaaaggaccaaaccgatactttaaataaagttaaggtatctaaacggaccttttattacttatgggaccaaaccgatacttgaaatt 52857006  T
Q  218 aagttaagagaccaa 232  Q
    |||||||| ||||||    
T  52857005 aagttaagggaccaa 52856991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 232
Target Start/End: Original strand, 49220260 - 49220434
Alignment:
Q  58 tttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaata 157  Q
    ||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       |||||||||||| | ||| |||||| || ||||||||||||    
T  49220260 tttggtcccttaacttatttaattagtattagtttggtctctaaacttaacgtttttttgaattaaattaacagaaaggaccaagctgatactttaaata 49220359  T
Q  158 aagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  49220360 aagttaagggacctaaacagactttttattatttatgggaccaaaccgatacttgaaattaagttaagggaccaa 49220434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 46453012 - 46453196
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| |||||||  |||||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       |    
T  46453012 cgttaaattttggtctcttaacttatttaattagtattagtttggtcccttaacttatttaattagtattagtttggtccctaaacttaacgtttttttg 46453111  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaa 202  Q
    ||||||||||| | ||| ||| ||||  ||||||||||||||||||| ||||||||||||| ||||||||| ||||| |||||||    
T  46453112 aattaaattaacataaaggactaaaccgatactttaaataaagttaagggacctaaacggactttttattacttatgagaccaaa 46453196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 31071093 - 31071259
Alignment:
Q  58 tttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaata 157  Q
    ||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       |||||||||||| | ||| ||||||||| ||||||||||||    
T  31071093 tttggtcccttaacttatttaattagtattagtttggtc-ctaaacttaacgcttttttgaattaaattaacagaaatgaccaaactgatactttaaata 31071191  T
Q  158 aagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    ||||||| |||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||||    
T  31071192 aagttaagggacctaaacagaccttttattatttatgggatcaaaccgatacttgaaatcaagttaag 31071259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 26247097 - 26246906
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| ||||| ||||||| ||||||||||||||||||  |||  ||||||||||||||||||||||||| ||||| ||||||       |    
T  26247097 cgttaaattttggtcccttatcttatttaattagtattagtttggtcctttaacttatttaattagtattagtttggtccctaaacttaacgtttttttg 26246998  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||| | ||| || |||||  ||||||||||||||||||| |||||||||||||  |||||||| ||| ||||||||| ||||||    
T  26246997 aattaaattaacagaaaggatcaaaccgatactttaaataaagttaagggacctaaacggacattttattacttacgggaccaaaacgatac 26246906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 28253580 - 28253792
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| ||||||||||||| || ||||||| ||||||| ||||| ||||||||| |||||||||||| || ||||| ||||         |    
T  28253580 cgttaaattttggtcccttaacttatttaatcagtattattttggtcccttatcttatttaat-agtattagtttgatccctaaacttaaa-tttttttg 28253677  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| || |||||| ||||||||||||||||||| |||| ||| | ||  ||||||||||||||||||||| |||||||||||||||    
T  28253678 aattaaattaacagaaatgatcaaactgatactttaaataaagttaagggacttaatcagaccttttattatttatgggaccaatccgatacttgaaatc 28253777  T
Q  218 aagttaagagaccaa 232  Q
    |||||||| ||||||    
T  28253778 aagttaagggaccaa 28253792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 4953263 - 4953453
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||  |||||| |||||| ||||||||||||||| || ||||  ||||||||||||||||||||||||| ||||| ||||||       ||    
T  4953263 gttaaattttggccccttaaattatttaattagtattagtttgatcccttaacttatttaattagtattagtttggtctctaaacttaacgtttttttga 4953362  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||| ||||   ||| ||||||||  | ||||||||||||||||| |||| ||||| || ||||||||| ||||||||||||| ||||||    
T  4953363 attaagttaacggaaaggaccaaaccgacactttaaataaagttaagggacttaaacagactttttattacttatgggaccaaaacgatac 4953453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 49220244 - 49220129
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | |||  |||||||  ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  49220244 gaattaaattaacagaaagcaccaaaccgataatttaaataaagttaaaggacctaaacggactttttattatttatgggactaaaccgatacttaaaat 49220145  T
Q  217 caagttaagagaccaa 232  Q
    ||||||||| ||||||    
T  49220144 caagttaagggaccaa 49220129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 31071078 - 31070962
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    ||||| |||||| ||||| ||||||||| |||||| |||||||||||| |||| ||||||||| |||||||| |||||||||||||| ||||||| ||||    
T  31071078 gaattgaattaacaaaaaggaccaaactgatactt-aaataaagttaagggacttaaacggatcttttattacttatgggaccaaactgatacttaaaat 31070980  T
Q  217 caagttaagagaccaaaa 234  Q
    ||||||||| ||||||||    
T  31070979 caagttaagggaccaaaa 31070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 26988980 - 26988820
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    ||||||||||||||||| ||||||| ||||||||||||        |||||||||||   ||  ||||||||  ||||||||||||||||||| ||||||    
T  26988980 ttatttaattagtattaatttggtccctaaatttaacgtttttttaaattaaattaactgaagggaccaaacccatactttaaataaagttaagggacct 26988881  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    ||| |||  |||||||| ||||||||| |||| |||||||||||| |||||||| ||||||    
T  26988880 aaaaggacattttattacttatgggacaaaactgatacttgaaataaagttaagggaccaa 26988820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 18734071 - 18733955
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | |||  || ||||| ||||||||||||||||||| |||| ||||| || |||||| |||| |||||||||||| ||||||||||||    
T  18734071 gaattaaattaacagaaagaacgaaactgatactttaaataaagttaagggacttaaacagactttttactatt-atgggaccaaactgatacttgaaat 18733973  T
Q  217 caagttaagagaccaaaa 234  Q
    ||||||||||||||||||    
T  18733972 caagttaagagaccaaaa 18733955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 43465039 - 43464850
Alignment:
Q  20 ttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaac-gnnnnnnnga 118  Q
    |||| ||||||| ||||| ||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||| |||||         ||    
T  43465039 ttaaattttggtcccttatcttatttaattagtattagtttggtcccttaacttatttaattagtattagtttggtccctaaacttaacattttttttga 43464940  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||| | ||| || | |||  |||||||||||| |||||| |||||||| ||||  |||||||| ||||||||||||| ||||||    
T  43464939 attaaattaacagaaaggatc-aaccgatactttaaatatagttaagggacctaaccggaccttttattacttatgggaccaaagcgatac 43464850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 24244603 - 24244793
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| |||||||  |||| ||||||| |||||||||||||||||  ||||  ||||||||||||||||| ||||||| ||||| |||| |            
T  24244603 cgttaaattttggtctcttatcttatttaattagtattagtttggtgccttaacttatttaattagtattaatttggtccctaaacttaatgtttttta- 24244701  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||| | ||| || |||||  ||||||||||||||||||| ||| |||||||||  |||||||| |||||| | |||| ||||||    
T  24244702 aattaaattaacagaaatgatcaaaccgatactttaaataaagttaagggatctaaacggaccttttattacttatggtatcaaagcgatac 24244793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 13301884 - 13301976
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||| | ||| || |||||  ||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||||    
T  13301884 gaattaaattaacagaaaggatcaaaccgatactttaaataaagttaagggacctaaacggatcttttattacttacgggaccaaagcgatac 13301976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 13312540 - 13312632
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||| | ||| || |||||  ||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||||    
T  13312540 gaattaaattaacagaaaggatcaaaccgatactttaaataaagttaagggacctaaacggatcttttattacttacgggaccaaagcgatac 13312632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 28253572 - 28253458
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||  ||||||||  |||||| |||||||||||| |||| |||||| | ||||||||| || ||||||||| | |||||||||||||    
T  28253572 aattaaattaacagaagggaccaaaccgatacttgaaataaagttaagggacttaaacgaactttttattacttttgggaccaatctgatacttgaaatc 28253473  T
Q  218 aagttaagagaccaa 232  Q
    | |||||| ||||||    
T  28253472 atgttaagggaccaa 28253458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 24244595 - 24244502
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||||| ||| ||||||||  ||||||| ||||||||||| ||||| |||| ||| |||||||| |||||||| |||| |||||||    
T  24244595 gaattaaattaatataaaggaccaaaccgatactttcaataaagttaagggaccaaaacagatcttttattacttatgggatcaaaacgatact 24244502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 26247108 - 26247200
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    ||||||||||| | ||| ||||||||| ||||||| |||||||||||  |||| |||||||  |||||||| ||||||||||||| |||||||    
T  26247108 aattaaattaacagaaaggaccaaactgatactttcaataaagttaagagaccaaaacggaccttttattacttatgggaccaaagcgatact 26247200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 11047095 - 11046990
Alignment:
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| | ||  ||||||||  |||||| |||||||||||| | ||||||| |||  |||||||  |||||||||||||||||||| ||||||||    
T  11047095 attaaattaacagaagggaccaaaccgatacttgaaataaagttaaag-acctaaagggaccttttatttcttatgggaccaaaccgatacatgaaatca 11046997  T
Q  219 agttaag 225  Q
    |||||||    
T  11046996 agttaag 11046990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 43465049 - 43465142
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||| ||| ||||||||||| ||||| |||||||  |||||||| ||||||||||||| |||||||    
T  43465049 gaattaaattaacagaaaggaccaaaccgataatttcaataaagttaatggaccaaaacggacattttattacttatgggaccaaaacgatact 43465142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 52857213 - 52857305
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||| | ||  ||||||||   |||||||||||||||||| ||||||||||| | ||||| ||||||| ||||||||| ||||||    
T  52857213 gaattaaattaacagaagggaccaaaccgttactttaaataaagttaagggacctaaacgaacttttttttatttaagggaccaaagcgatac 52857305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 49220252 - 49220298
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  49220252 cgttaaattttggtcccttaacttatttaattagtattagtttggtc 49220298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 18734079 - 18734124
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  18734079 gttaaattttggtcccttaacttatttaattagtattagtttggtc 18734124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 46453004 - 46452920
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaa 202  Q
    ||||||||||| | ||  |||||||||  |||||||||||||||||| ||| | |||||||  |||||||| ||| |||||||||    
T  46453004 aattaaattaacagaagggaccaaactgttactttaaataaagttaagggatcaaaacggaccttttattacttaagggaccaaa 46452920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 4953253 - 4953162
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||| | ||  |||||||| | |||||||||||||||||| ||||| ||  |||  |||||||| ||| ||||||||| ||||||    
T  4953253 aattaaattaacagaagggaccaaaccattactttaaataaagttaagggaccaaattggaccttttattacttaagggaccaaagcgatac 4953162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 11046980 - 11046942
Alignment:
Q  194 gggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  11046980 gggaccaaaccgatacatgaaatcaagttaagggaccaa 11046942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 18734086 - 18734136
Alignment:
Q  58 tttggtcacttattttatttaattagtattagtttggtcgctaaatttaac 108  Q
    ||||||| ||||  ||||||||||||||||||||||||| ||||| |||||    
T  18734086 tttggtcccttaacttatttaattagtattagtttggtctctaaacttaac 18734136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 31071093 - 31071131
Alignment:
Q  26 tttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  31071093 tttggtcccttaacttatttaattagtattagtttggtc 31071131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 6276188 - 6276096
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||||   ||| || |||||| |||||||||||||||||   ||| |||||||||  |||||||| |||| ||| |||| ||||||    
T  6276188 gaattaaattaaccgaaaggatcaaactgatactttaaataaagttttgggatctaaacggaccttttattacttattggatcaaagcgatac 6276096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 6276275 - 6276207
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtatt 87  Q
    ||||| ||||||| ||||| ||||||| ||||  ||||||||| || ||||  ||||||||||||||||    
T  6276275 gttaaattttggtcccttatcttatttaattaacattagtttgatcccttaacttatttaattagtatt 6276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 20184542 - 20184486
Alignment:
Q  153 aaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||||   ||| |||||||||| || ||| ||||||||||||||||||||    
T  20184542 aaataaagttaaaataccaaaacggatttatttttagttatgggaccaaaccgatac 20184486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 36194766 - 36194988
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| ||||||||| ||||| || ||||  |||||||||||||||||||||| || ||||| ||||||       ||    
T  36194766 gttaaattttggtcccttaacttatttaattagtattggtttgatcccttaacttatttaattagtattagtttgatccctaaacttaacgtatttttga 36194865  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    | |||||||| | ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  36194866 actaaattaacagaaaggaccaaactgatactttaaataaagttaaaggacctaaacggatttttgattatttatgggaccaaaccgatacttaaaatca 36194965  T
Q  219 agttaagagaccaaaatagcatt 241  Q
    ||||||| ||| |||| ||||||    
T  36194966 agttaagggactaaaagagcatt 36194988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 12654930 - 12654707
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| |||||||  |||||||||||| |||||||||||||||||| ||||  ||||||||||||||||| ||| ||| ||||| ||||||       |    
T  12654930 cgttaaattttggtctcttaacttatttaattagtattagtttggtcccttaacttatttaattagtattactttagtccctaaacttaacgcttttttg 12654831  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||||| ||||||||||||||||||| | | ||||| |||  |||||||||||||||||||||||||| |||||||||     
T  12654830 aattaaattaacagaaaggaccaaactgatactttaaataaagttaaggaaactaaatggaccttttattatttatgggaccaaaccgacacttgaaata 12654731  T
Q  218 aagttaagagaccaaaatagcatt 241  Q
    |||||||| |||||||| ||||||    
T  12654730 aagttaagggaccaaaagagcatt 12654707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 21015071 - 21015261
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||  ||||||||||||||||||||||||| ||||| ||||||       ||    
T  21015071 gttaaattttggtcccttaacttatttaattagtattagtttggttccttaacttatttaattagtattagtttggtccctaaacttaacgtttttttga 21015170  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||| | ||| ||||||||  ||||||||||||||||||| ||||| |||| || ||||||||| ||||||||||||| ||||||    
T  21015171 attaaattaaaagaaaggaccaaaccgatactttaaataaagttaagggacccaaacagactttttattacttatgggaccaaagcgatac 21015261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 10134837 - 10134646
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||| | ||||| ||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       |    
T  10134837 cgttaaattttgatcccttatcttatttaattagtattagtttggtcccttaacttatttaattagtattagtttggtccctaaacttaacgtttttttg 10134738  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||| | ||| || |||||  ||||||||||||||||||| |||||||||||||  |||||||| ||||||||||||| ||||||    
T  10134737 aattaaattaacagaaaggatcaaaccgatactttaaataaagttaagggacctaaacggaccttttattacttatgggaccaaagcgatac 10134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 13557368 - 13557157
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||| | | ||||||||||| |||||||| ||||||||| ||||  ||||||||||||||||| ||||||| ||||| ||||||       |    
T  13557368 cgttaaattttgatcctttaacttatttaattagtat-agtttggtcccttaacttatttaattagtattaatttggtctctaaacttaacgtttttttg 13557270  T
Q  118 aattaaattaataaaaaag-accaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    ||||||||||| ||||||| | || ||  ||||||||| ||||||||  ||||||||||| |  |||||||| |||||||||||||||||||||||||||    
T  13557269 aattaaattaacaaaaaaggatcagaccgatactttaa-taaagttatgggacctaaacgaaccttttattacttatgggaccaaaccgatacttgaaat 13557171  T
Q  217 caagttaagagacc 230  Q
    ||||||||| ||||    
T  13557170 caagttaagggacc 13557157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 31933508 - 31933632
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| ||||||| | |||||||||||||||||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  31933508 gaattaaattaagagaaaggaccaaattgatactttaaataaagttagcggatctaaatggactttttattacttatgggaccaaaccgatacttgaaat 31933607  T
Q  217 caagttaagagaccaaaatagcatt 241  Q
    ||||||||| |||||||| ||||||    
T  31933608 caagttaagggaccaaaagagcatt 31933632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 31933501 - 31933286
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| |||||||  |||||||||||| ||||||||||||||  || ||||  ||||||||||||||||||||||||| ||||| |||||             
T  31933501 cgttaaattttggtctcttaacttatttaattagtattagtttaatcccttaacttatttaattagtattagtttggtccctaaacttaacattttttt- 31933403  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||| | ||||||||||||||||||| ||| |||||  ||  |||||||| ||||||||||||||| |||||| |||||    
T  31933402 aattaaattaacagaaaggaccaaagtgatactttaaataaagttaagggatctaaatagaccttttattacttatgggaccaaaccaatacttaaaatc 31933303  T
Q  218 aagttaagagaccaaaa 234  Q
    || ||||| ||||||||    
T  31933302 aaattaagggaccaaaa 31933286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 12654938 - 12655062
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||| | | ||| ||||||||  ||||||||||||||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  12654938 gaattaaattgacataaaggaccaaacagatactttaaataaagttaagggacctaaacggaacttttattacttatgggaccaaaccgatacttgaaat 12655037  T
Q  217 caagttaagagaccaaaatagcatt 241  Q
    ||||||||| || ||||| ||||||    
T  12655038 caagttaagggatcaaaagagcatt 12655062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 36194757 - 36194633
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||||| ||| || |||||| ||||||||||||||||||| ||| |||||| || ||||||||| ||||||||||||| |||||||||||||    
T  36194757 gaattaaattaatagaaaggatcaaactgatactttaaataaagttaagggatctaaacagactttttattacttatgggaccaaaacgatacttgaaat 36194658  T
Q  217 caagttaagagaccaaaatagcatt 241  Q
    ||||||||| ||| |||| ||||||    
T  36194657 caagttaagggactaaaagagcatt 36194633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 13557377 - 13557490
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | |||||||||||| | |||||||||| ||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  13557377 gaattaaattaacataaaagaccaaacga-tactttaaatgaagttaagggacctaaacggaccttttattacttatgggaccaaaccgatacttgaaat 13557475  T
Q  217 caagttaagagacca 231  Q
    ||||||||| |||||    
T  13557476 caagttaagggacca 13557490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 18847555 - 18847382
Alignment:
Q  58 tttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaata 157  Q
    ||||||| ||||  |||||||||||||||||||||||||  |||  ||||||       |||||||||||| | ||  ||||||||  ||||||||||||    
T  18847555 tttggtcccttaacttatttaattagtattagtttggtctttaagcttaacggttttttgaattaaattaacataagggaccaaaccgatactttaaata 18847456  T
Q  158 aagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    ||||||| |||| |||||  |  |||||||| ||||| |||| || |||||||||||||||||||||| ||||||    
T  18847455 aagttaagggacataaacaaaccttttattacttatgagacc-aatcgatacttgaaatcaagttaagggaccaa 18847382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 40832319 - 40832174
Alignment:
Q  66 cttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnn--gaattaaattaataaaaaagaccaaactaatactttaaataaagtta 163  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||         |||||||||||| | ||| || |||||  |||||||||||||| |||    
T  40832319 cttatcttatttaattagtattagtttggtccctaaacttaacgtttttttttgaattaaattaacataaaggatcaaaccgatactttaaataaaatta 40832220  T
Q  164 acggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    | |||||||||||||  |||||||| |||||||| |||| ||||||    
T  40832219 agggacctaaacggaccttttattacttatgggatcaaaacgatac 40832174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 10134845 - 10134938
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| ||||| |||||||  |||||||| ||||||||||||| |||||||    
T  10134845 gaattaaattaacagaaaggaccaaaccgatactttcaataaagttaagggaccaaaacggaccttttattacttatgggaccaaagcgatact 10134938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 40832343 - 40832436
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| ||  | |||||||| |||||||| ||||||||||||| |||||||    
T  40832343 gaattaaattaacagaaaggaccaaaccgatacttttaataaagttaaggggacaaaacggatcttttattacttatgggaccaaagcgatact 40832436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 18847605 - 18847679
Alignment:
Q  151 ttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    ||||| |||||||| |||| ||||  || ||||||||| ||||||||| |||| |||||||||||||||||||||    
T  18847605 ttaaacaaagttaagggacttaaatagactttttattacttatgggacaaaactgatacttgaaatcaagttaag 18847679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 18847563 - 18847517
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  18847563 cgttaaattttggtcccttaacttatttaattagtattagtttggtc 18847517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 32871748 - 32871971
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacg-nnnnnnn 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||||| |            
T  32871748 cgttaagttttggtcccttaacttatttcattagtattagtttggtctcttatcttatttaattagtattagtttagtccctaaatttaatgtttttttt 32871847  T
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacgga-ttttttattatttatgggaccaaaccgatacttgaaa 215  Q
     ||||||||||||||||| || ||||||||||| |    |||| ||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32871848 taattaaattaataaaaaggatcaaactaatacct----taaaattaagtgacctaaacggatttttttattatttatgggaccaaatcgatacttgaaa 32871943  T
Q  216 tcaagttaagagaccaaaatagcattaa 243  Q
    |||| |||||||||||||||||||||||    
T  32871944 tcaaattaagagaccaaaatagcattaa 32871971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 4132976 - 4133189
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||  || ||||||||||||||||||||||  |||| ||||||       ||    
T  4132976 gttaaattttggtcccttaacttatttaattagtattagtttggtcccttaacttttttaattagtattagtttggtccataaacttaacgtttttttga 4133075  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| | ||| ||||||||| | ||||||||||||||||| |||||||||||||  |||||||| ||||| || |||||| |||||||||||||    
T  4133076 attaaattaacagaaaggaccaaactgacactttaaataaagttaagggacctaaacggacattttattacttatgagatcaaaccaatacttgaaatca 4133175  T
Q  219 agttaagagaccaa 232  Q
    ||||||| ||||||    
T  4133176 agttaagggaccaa 4133189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 34 - 232
Target Start/End: Complemental strand, 43392511 - 43392313
Alignment:
Q  34 cttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaa 133  Q
    |||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||| ||  |||| |||||        |||||||||||| ||||    
T  43392511 cttaacttatttaattagtattagtttggtcccttaacttatttaattagtattagtttgttccgtaaacttaacatttttttgaattaaattaacaaaa 43392412  T
Q  134 aagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
      ||||||||  ||| ||||||||||||||| |||||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  43392411 gggaccaaaccgatattttaaataaagttaagggacctaaacggaccttttaatatttatgggaccaaaccaatacttgaaatcaagttaagggaccaa 43392313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 18417362 - 18417577
Alignment:
Q  25 ttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaa 124  Q
    |||||||  |||||||||||| |||||||||||||||  | ||||  ||||||||||||||||||||| ||| ||||| ||||||        |||||||    
T  18417362 ttttggtctcttaacttatttaattagtattagtttgacc-cttaacttatttaattagtattagtttagtccctaaacttaacgtttttttaaattaaa 18417460  T
Q  125 ttaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaa 224  Q
    |||||  ||| ||||||| | ||||||||||||||||||| ||||||||| |||  ||||||||||||| ||| |||||||||||||||||| |||||||    
T  18417461 ttaatggaaaggaccaaattgatactttaaataaagttaagggacctaaatggaccttttattatttataggatcaaaccgatacttgaaataaagttaa 18417560  T
Q  225 gagaccaaaatagcatt 241  Q
    | |||||||| ||||||    
T  18417561 gggaccaaaaaagcatt 18417577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 8463022 - 8462869
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    ||||||||||||||||||||||||| ||||| ||||||       |||||||||||| | ||| || ||||| |||||||||||||||||||| ||||||    
T  8463022 ttatttaattagtattagtttggtccctaaacttaacgtttttttgaattaaattaacagaaaggatcaaaccaatactttaaataaagttaaaggacct 8462923  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    |||| ||  ||||||||||||||||||||||| |||| ||||||||||||||||    
T  8462922 aaacagacattttattatttatgggaccaaactgatatttgaaatcaagttaag 8462869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 6000608 - 6000494
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  6000608 aattaaattaacagaaaggaccaaactgatactttaaataaagttaagggacctaaatggactttttattacttatgggaccaaaccgatacttgaaatc 6000509  T
Q  218 aagttaagagaccaa 232  Q
    |||||||| ||||||    
T  6000508 aagttaagggaccaa 6000494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 225
Target Start/End: Original strand, 6000639 - 6000792
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    ||||||||||||||||||||||||| ||||| ||||||       |||||||||||| | ||| |||| |||  ||||||||||||||||||| ||||||    
T  6000639 ttatttaattagtattagtttggtccctaaacttaacgtttttttgaattaaattaagagaaaggacctaacggatactttaaataaagttaagggacct 6000738  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    ||||||| ||||||||| |||| ||||||||| |||||||||||| || |||||    
T  6000739 aaacggactttttattacttataggaccaaactgatacttgaaattaaattaag 6000792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 26041645 - 26041835
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||| | ||||| ||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       |    
T  26041645 cgttaaattttgatcccttatcttatttaattagtattagtttggtcccttaacttatttaattagtattagtttggtccctaaacttaacgtttttttg 26041744  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||  | ||||| |||||  ||||||||||||||||||| ||||||||||  |  |||||||| |||| |||||||| ||||||    
T  26041745 aattaaattaa-cataaagatcaaaccgatactttaaataaagttaagggacctaaacaaaccttttattacttataggaccaaagcgatac 26041835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 30284145 - 30283956
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| ||||| ||||||| |||||||||||||||||| ||||  |||||||||||||| |||||||||| ||||| ||||||       |    
T  30284145 cgttaaattttggtcccttatcttatttaattagtattagtttggtcccttaacttatttaattagta-tagtttggtccctaaacttaacgtttttttg 30284047  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||| ||||| || |||||  ||||||||||| ||||||| ||| |||||||||  |||||||| ||||| ||||||| ||||||    
T  30284046 aattaaattaacaaaaaggatcaaaccgatactttaaatgaagttaaggga-ctaaacggaccttttattacttatgagaccaaaacgatac 30283956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 32871740 - 32871622
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggatttttt-attatttatgggaccaaaccgatacttgaaa 215  Q
    |||||||||||| | |||  |||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||| |||||| |||    
T  32871740 gaattaaattaacataaagaaccaaactcatactttaaataaagttaagggacctaaacagatttttttattatttatgggaccaaaccaatacttaaaa 32871641  T
Q  216 tcaagttaagagaccaaaa 234  Q
    |||||||||| || |||||    
T  32871640 tcaagttaagggatcaaaa 32871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 37691834 - 37691979
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||  |||| |||||        ||    
T  37691834 gttaaattttggtccattaacttatttaattagtattagtttggtctcttatcttatttaattagtattagtttggtccttaaacttaacatttttttga 37691933  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaa 164  Q
    ||||||||||   ||| ||||||||| |||||||||||||||||||    
T  37691934 attaaattaactgaaaggaccaaactgatactttaaataaagttaa 37691979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 472744 - 472895
Alignment:
Q  58 tttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaata 157  Q
    ||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||       |||||||||||| | ||| || |||||  ||||||||||||    
T  472744 tttggtcccttatcttatttaattagtattagtttggtccctaaagttaacgtttttttgaattaaattaacagaaaggatcaaaccgatactttaaata 472843  T
Q  158 aagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||| |||||||||||||   || |||| ||||||||||||| ||||||    
T  472844 aagttaagggacctaaacggacagttcattacttatgggaccaaagcgatac 472895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 37691825 - 37691718
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||||||||||| | |||||||||||||| |||| |||| ||| |||| ||||||||| |||||| | ||||||||||||||||||    
T  37691825 gaattaaattaacagaaaagaccaaagtgatactttaaataaaattaagggacttaatcggactttttattacttatggaatcaaaccgatacttgaaat 37691726  T
Q  217 caagttaa 224  Q
    ||||||||    
T  37691725 caagttaa 37691718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 209
Target Start/End: Original strand, 24485728 - 24485864
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    ||||||||||||||||||||||||| ||||| |||||         ||||||||||||| ||| ||||||||  | ||||||||||||||||| |||| |    
T  24485728 ttatttaattagtattagtttggtccctaaacttaacattttttt-aattaaattaatagaaaggaccaaaccgacactttaaataaagttaagggactt 24485826  T
Q  172 aaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||| ||||||||| ||||||||||||| ||||||    
T  24485827 aaacggactttttattacttatgggaccaaaacgatac 24485864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 32389680 - 32389781
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| ||||| || |||||| ||||||||||||||||||| |||| ||||| ||  |||||||| |||| ||||||||| |||||||||||||    
T  32389680 aattaaattaacaaaaaggatcaaactgatactttaaataaagttaagggacttaaacagacattttattacttattggaccaaactgatacttgaaatc 32389779  T
Q  218 aa 219  Q
    ||    
T  32389780 aa 32389781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 24846425 - 24846289
Alignment:
Q  66 cttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaac 165  Q
    ||||| ||||||||||||||||||||||||   |||| ||||||        ||||||||||| | ||| || |||||| |||||||||||||||||||     
T  24846425 cttatcttatttaattagtattagtttggttcataaacttaacgttttttttaattaaattaacataaatgatcaaactgatactttaaataaagttaag 24846326  T
Q  166 ggacctaaacggattttttattatttatgggaccaaa 202  Q
    |||||||||||||  |||||||| ||||| |||||||    
T  24846325 ggacctaaacggaccttttattacttatgagaccaaa 24846289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 8463052 - 8463143
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgata 208  Q
    |||||||||||| | || ||||||||||  |||||||||||||||||| ||| ||||||||| ||||||||||||| |||| |||| |||||    
T  8463052 gaattaaattaacagaagagaccaaactgttactttaaataaagttaagggatctaaacggaatttttattatttaagggatcaaagcgata 8463143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 25732018 - 25731924
Alignment:
Q  147 tactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaaaatagcatt 241  Q
    ||||| |||| ||||||| ||| |||| | ||  |||||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  25732018 tacttgaaatcaagttaagggatctaagcagaccttttattacttatgggactaaaccgatacttgaaatcaagttaagggaccaaaagagcatt 25731924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 472728 - 472635
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||| ||||||| ||||||||||| ||||||||||| |  |||||||| ||||| ||||||| |||||||    
T  472728 gaattaaattaacagaaaggaccaaactgatactttcaataaagttaagggacctaaacgcaccttttattacttatgagaccaaaacgatact 472635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 26041637 - 26041544
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| ||||| |||||||  |||||||| ||||||||||||| |||||||    
T  26041637 gaattaaattaacagaaaggaccaaaccgatactttcaataaagttaagggaccaaaacggaccttttattacttatgggaccaaagcgatact 26041544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 30284153 - 30284246
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| |||||||||||||  |||||||| ||||| ||||||| |||||||    
T  30284153 gaattaaattaacagaaatgaccaaaccgatactttcaataaagttaagggacctaaacggacattttattacttatgagaccaaagcgatact 30284246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 24846450 - 24846542
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    ||||||||||| | ||| |||||||| |||||||| ||||||||||| ||||  |||||||  ||||||||||||||| |||||| |||||||    
T  24846450 aattaaattaacagaaaggaccaaaccaatactttcaataaagttaagggactaaaacggaccttttattatttatggaaccaaagcgatact 24846542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 16963441 - 16963363
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtc 96  Q
    |||||| ||||| | ||||  ||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  16963441 cgttaaattttgatcccttctcttatttaattagtattagtttggtcccttaacttatttaattagtattagtttggtc 16963363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 16962974 - 16962882
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||| | |||  | |||| | ||||||||||||||||||| |||||||||||||  |||||||| ||||| ||||||| ||||||    
T  16962974 gaattaaattaacataaagaatcaaaatgatactttaaataaagttaatggacctaaacggaccttttattacttatgagaccaaagcgatac 16962882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 16963451 - 16963534
Alignment:
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaa 202  Q
    |||||||||| | ||||||||||||  ||||||| ||||||||||| ||||| ||| |||  |||||||| |||||||| ||||    
T  16963451 attaaattaacagaaaagaccaaaccgatactttcaataaagttaagggaccaaaatggacattttattacttatgggaacaaa 16963534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 24485706 - 24485752
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||    
T  24485706 cgttaaattttggtttcttaacttatttaattagtattagtttggtc 24485752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 7685314 - 7685230
Alignment:
Q  148 actttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    ||||||||||||||||  | || ||||| ||| |||||||| ||||  ||  |||||||||||||||||||| ||||| ||||||    
T  7685314 actttaaataaagttatggaacttaaacagatattttattacttataagattaaaccgatacttgaaatcaaattaagggaccaa 7685230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 16833521 - 16833477
Alignment:
Q  181 ttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||    
T  16833521 ttttattacttataggaccaaaccaatacttgaaatcaagttaag 16833477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 4132948 - 4132906
Alignment:
Q  194 gggaccaaaccgatacttgaaatcaagttaagagaccaaaata 236  Q
    |||| |||||||||||||||||| |||||||| ||||||||||    
T  4132948 gggatcaaaccgatacttgaaataaagttaagggaccaaaata 4132906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 6000617 - 6000663
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| ||||||| | ||||||||||| ||||||||||||||||||    
T  6000617 cgttaaattttggtccattaacttatttaattagtattagtttggtc 6000663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 16833583 - 16833629
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| ||||||| ||||||||||||| ||| ||||||||||||||    
T  16833583 cgttaaattttggtcccttaacttatttaattggtattagtttggtc 16833629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 21709244 - 21709166
Alignment:
Q  161 ttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaaaatagca 239  Q
    |||| |||| |||||||| ||||||||| ||||||||||||| |||||||  |||   ||||||| ||| |||||||||    
T  21709244 ttaaaggacttaaacggactttttattaattatgggaccaaagcgatactaaaaaattagttaagggacgaaaatagca 21709166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 24485698 - 24485608
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgata 208  Q
    ||||||||||||| ||  |||||||| | |||||||||||||||||| ||||  || ||||  |||||||| |||  |||||||| |||||    
T  24485698 aattaaattaatagaagggaccaaaccattactttaaataaagttaagggactaaatcggacattttattacttaaaggaccaaaacgata 24485608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 472737 - 472782
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    ||||| ||||||| ||||| ||||||| ||||||||||||||||||    
T  472737 gttaaattttggtcccttatcttatttaattagtattagtttggtc 472782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 30050143 - 30049921
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||| || ||||| ||||||       ||    
T  30050143 gttaaattttggtccattaacttatttaattagtattagtttggtcccttatcttatttaattagtattagtttgatccctaaacttaacgtttttttga 30050044  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| | ||||||||||||| ||||||||||||||||||| ||||  ||||||| |||||||||  |||| ||||||||||||||||||||| |    
T  30050043 attaaattaacagaaaagaccaaactgatactttaaataaagttaagggactcaaacggactttttattacatatgagaccaaaccgatacttgaaataa 30049944  T
Q  219 agttaagagaccaaaatagcatt 241  Q
    ||||||| |||||||| ||||||    
T  30049943 agttaagggaccaaaagagcatt 30049921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 39277810 - 39277597
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| |||||||  |||||||||||| |||||||||||||||||| ||||  ||||||||||||||||| ||||||| || || ||||||       ||    
T  39277810 gttaaattttggtctcttaacttatttaattagtattagtttggtcccttaacttatttaattagtattaatttggtccctcaacttaacgtttttttga 39277711  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| | ||| ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||| |    
T  39277710 attaaattaacagaaaggaccaaactgatactttaaataaagttaagggacctaaacggactttttattacttatgggaccaaactgatacttgaaatta 39277611  T
Q  219 agttaagagaccaa 232  Q
    ||||||| ||||||    
T  39277610 agttaagggaccaa 39277597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 19920719 - 19920527
Alignment:
Q  33 ccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaa 132  Q
    |||| |||||||| | |||||||||||||||| ||||  |||||||||||||||| |||||||| ||||| ||||||       |||||||||||| | |    
T  19920719 ccttgacttatttaactagtattagtttggtcccttaacttatttaattagtatttgtttggtccctaaacttaacgtttttttgaattaaattaacata 19920620  T
Q  133 aaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    | |||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  19920619 agagaccaaactgatactttaaataaagttaagggacctaaacggatcttttattacttatgggaccaaaccgatacttgaaatcaagttaag 19920527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 28990527 - 28990314
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| | ||||||||||| |||||||| ||||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       |    
T  28990527 cgttaaattttggtccattaacttatttaattagtat-agtttggtcccttaacttatttaattagtattagtttggtctctaaacttaacgtttttttg 28990429  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| ||||| ||||| ||  ||||||||||||||||||| |||||||| ||||  |||||||| ||||||||||||||||||||||||||||    
T  28990428 aattaaattaacaaaaaggaccagaccgatactttaaataaagttaagggacctaagcggaccttttattacttatgggaccaaaccgatacttgaaatc 28990329  T
Q  218 aagttaagagaccaa 232  Q
    |||||||| ||||||    
T  28990328 aagttaagggaccaa 28990314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 45823014 - 45822802
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||| |||||        ||    
T  45823014 gttaaattttggtcccttaacttatttaattagtattagtttggtcccttaacttatttaattagtattagtttggtccctaaacttaac-attttttga 45822916  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| | ||| ||| || || ||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||  |||||||||||| |    
T  45822915 attaaattaacagaaaggactaagctgatactttaaataaagttaaggaacctaaacggactttttattacttatgggaccaaattgatacttgaaatta 45822816  T
Q  219 agttaagagaccaa 232  Q
    ||||||| ||||||    
T  45822815 agttaagggaccaa 45822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 10394269 - 10394475
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||| ||||  ||||||||||||||||| |||| ||  |||| ||||||       ||    
T  10394269 gttaaattttgcttccttaacttatttaattaatattagtttggtcccttaacttatttaattagtattaatttgatccgtaaacttaacgattttttga 10394368  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| ||||  ||||||||  ||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||| | |||||||||||||    
T  10394369 attaaattaacaaaagggaccaaaccgatactttaaataaagttaagggacctaaacggaccttttaatatttatgggaccaaaacaatacttgaaatca 10394468  T
Q  219 agttaag 225  Q
    |||||||    
T  10394469 agttaag 10394475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 16959067 - 16958864
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| |||||||  |||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||| ||||||       |    
T  16959067 cgttaaattttggtctcttaacttattttaatagtattagttttgtcccttattttatttaattagtattagtttagtccctaaacttaacgcttttttg 16958968  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||    ||||||| ||| ||||||||||||||| ||||||||| |||  |||||||||||||||||||||||||| ||||||||||    
T  16958967 aattaaattaacagaa----ccaaactgataatttaaataaagttaagggacctaaatggaccttttattatttatgggaccaaaccgacacttgaaatc 16958872  T
Q  218 aagttaag 225  Q
    ||||||||    
T  16958871 aagttaag 16958864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 225
Target Start/End: Complemental strand, 7714383 - 7714194
Alignment:
Q  36 taacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaa 135  Q
    |||||||||| |||||||||| ||| ||| ||||  |||||||||||||||||||||||||  |||| ||||||       |||||||||||| | |||     
T  7714383 taacttatttaattagtattattttagtcccttagcttatttaattagtattagtttggtccttaaaattaacgttttattgaattaaattaacagaaag 7714284  T
Q  136 gaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    ||||||||| ||||||||||||||||||| ||||||| || || ||||||||| |||||||||||||||||||||| |||||||||||||    
T  7714283 gaccaaactgatactttaaataaagttaagggacctagacagactttttattacttatgggaccaaaccgatacttaaaatcaagttaag 7714194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 52285191 - 52285406
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||| || ||||| |||||         |    
T  52285191 gttaaattttggtcccttaacttatttaattagtattagtttggtctcttagcttatttaattagtattagtttgttccctaaacttaacaattttttaa 52285290  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| | ||| ||||||||  ||||||||||||||||||| |||||||||| ||  |||||||| |||| ||||||||  ||||||| ||||||    
T  52285291 attaaattaacagaaatgaccaaacggatactttaaataaagttaagggacctaaacagaccttttattacttataggaccaaattgatacttaaaatca 52285390  T
Q  219 agttaagagaccaaaa 234  Q
    ||||||| ||||||||    
T  52285391 agttaagggaccaaaa 52285406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 39277820 - 39277934
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||||  ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  39277820 aattaaattaacagaaaggaccaaaccgatactttaaataaagttaagggacctaaacggactttttattacttatgggaccaaaccgatacttgaaatc 39277919  T
Q  218 aagttaagagaccaa 232  Q
    |||||||| ||||||    
T  39277920 aagttaagggaccaa 39277934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 28990535 - 28990650
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| ||||||||| ||||||||||| ||||||| |||||||||||||  |||||||| ||||||||||||||| |||||||||||    
T  28990535 gaattaaattaacagaaaggaccaaactgatactttaaatgaagttaagggacctaaacggaccttttattacttatgggaccaaaccaatacttgaaat 28990634  T
Q  217 caagttaagagaccaa 232  Q
    ||||||||| ||||||    
T  28990635 caagttaagggaccaa 28990650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 10394260 - 10394145
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| ||||||||  ||||||||||||||||||| ||| ||||||| |  |||||||| |||||||||||||||||||||||||||    
T  10394260 gaattaaattaacagaaaggaccaaaccgatactttaaataaagttaagggatctaaacgaaccttttattacttatgggaccaaaccgatacttgaaat 10394161  T
Q  217 caagttaagagaccaa 232  Q
    ||||||||| ||||||    
T  10394160 caagttaagggaccaa 10394145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 45823025 - 45823132
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||||  ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||    
T  45823025 aattaaattaacagaaaggaccaaaccgatactttaaataaagttaagggacctaaacggactttttattacttatgggaccaaaccaatatttgaaatc 45823124  T
Q  218 aagttaag 225  Q
    ||||||||    
T  45823125 aagttaag 45823132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 47422099 - 47422213
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||||  ||||||||||||||||||| |||||||||| ||  | |||||| ||||||||||||||||||||||||||||    
T  47422099 aattaaattaacagaaatgaccaaaccgatactttaaataaagttaagggacctaaacagacctcttattacttatgggaccaaaccgatacttgaaatc 47422198  T
Q  218 aagttaagagaccaa 232  Q
    |||||||| ||||||    
T  47422199 aagttaagggaccaa 47422213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 15158497 - 15158349
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    ||||||||||||||||||||||||| ||||| |||||        |||||||||||||| ||  ||||||||  |||||| ||||||| |||| ||||||    
T  15158497 ttatttaattagtattagtttggtccctaaacttaac-attttttgaattaaattaatagaacggaccaaaccgatacttgaaataaatttaagggacct 15158399  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagt 221  Q
    ||||| |  |||||||| ||||||||||||||||||||||||||||||||    
T  15158398 aaacgaaccttttattacttatgggaccaaaccgatacttgaaatcaagt 15158349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 27334475 - 27334367
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||  |||||||| | |||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||||||||    
T  27334475 gaattaaattaacagaagggaccaaaccattactttaaataaagttaagggacctaaacggatcttttattacttatgagaccaaatcgatacttgaaat 27334376  T
Q  217 caagttaag 225  Q
    |||||||||    
T  27334375 caagttaag 27334367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 47422066 - 47421906
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    |||||||||||||| ||||||| || ||| | ||||||       |||  ||||||| | ||| ||||||||| ||| ||||||||||||||| ||||||    
T  47422066 ttatttaattagtagtagtttgatccctacacttaacgtttttttgaaacaaattaacataaaggaccaaactgataatttaaataaagttaagggacct 47421967  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    |||| ||  |||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  47421966 aaacagacattttattacttatgggaccaaaccgatatttgaaatcaagttaagggaccaa 47421906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 10719510 - 10719653
Alignment:
Q  66 cttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaac 165  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||        |||||||||||| | ||| || |||||  |||||||||||||||||||     
T  10719510 cttatcttatttaattagtattagtttggtccctaaacttaacatttttttgaattaaattaacagaaaggatcaaaccgatactttaaataaagttaag 10719609  T
Q  166 ggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||||  |||||||| |||||| |||||| ||||||    
T  10719610 ggacctaaacggaccttttattacttatggaaccaaagcgatac 10719653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 16959075 - 16959179
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||| | | ||| || |||||| || |||||||||||||||| ||||||||||  | ||||||||| |||||||||||||||||||||||||||    
T  16959075 gaattaaattgacataaaggatcaaactgatgctttaaataaagttaagggacctaaacataatttttattacttatgggaccaaaccgatacttgaaat 16959174  T
Q  217 caagt 221  Q
    |||||    
T  16959175 caagt 16959179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 30050153 - 30050269
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||| | |||||||||||||||||||  ||| ||| |||| ||||||||| || || ||||||||||||||||||||||    
T  30050153 aattaaattaacagaaatgaccaaattgatactttaaataaagttaagagacataatcggactttttattacttgtgcgaccaaaccgatacttgaaatc 30050252  T
Q  218 aagttaagagaccaaaa 234  Q
    |||||||  ||||||||    
T  30050253 aagttaatggaccaaaa 30050269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 36077014 - 36076907
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||| ||||| | || |||||||||  ||||||||||||||||||| ||||||||||| |  |||||||| |||||||| ||| |||||||||||||||    
T  36077014 aattatattaacagaagagaccaaaccgatactttaaataaagttaagggacctaaacgaaccttttattacttatgggatcaagccgatacttgaaatc 36076915  T
Q  218 aagttaag 225  Q
    ||||||||    
T  36076914 aagttaag 36076907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 35814227 - 35814416
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| |||||||  |||| ||||||| ||| ||||||||||  || ||||  ||||||||||| ||||||||||||| ||||| |||| |        |    
T  35814227 gttaaattttggtctcttatcttatttaattggtattagttttctcccttaacttatttaattaatattagtttggtccctaaacttaatgttttttt-a 35814325  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||  | ||| || |||||| ||||||||||||||||||| |||||||||||||  |||||||| ||| ||||||||| ||||||    
T  35814326 attaaattatcagaaaggatcaaactgatactttaaataaagttaagggacctaaacggaccttttattacttaagggaccaaagcgatac 35814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 52285183 - 52285079
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| || |||||| ||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||||| |||||| ||||    
T  52285183 gaattaaattaacagaaaggatcaaactgatactttaaataaagttaa-ggacctaaacggactttttattacttatgagaccaaaccaatacttaaaat 52285085  T
Q  217 caagtt 222  Q
     |||||    
T  52285084 taagtt 52285079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 49186130 - 49186022
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||  |||||||| | |||||||||||||||||| |||| ||||||||  |||||||| ||||  |||||||| ||||||||||||    
T  49186130 gaattaaattaacagaagtgaccaaaccattactttaaataaagttaaaggacgtaaacggaccttttattacttataagaccaaactgatacttgaaat 49186031  T
Q  217 caagttaag 225  Q
    |||||||||    
T  49186030 caagttaag 49186022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 36077121 - 36077199
Alignment:
Q  147 tactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    |||||||||||||||||| | |||||||| ||  |||||||| |||||||| |||||||||||||||||||||||||||    
T  36077121 tactttaaataaagttaatgaacctaaacagaccttttattacttatgggagcaaaccgatacttgaaatcaagttaag 36077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 10719486 - 10719393
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| ||||| ||||||||  ||||||| ||||||||||| || || |||||||  |||||||||||||||||||||| |||||||    
T  10719486 gaattaaattaacaaaaaggaccaaaccgatacttttaataaagttaaggggccaaaacggaccttttattatttatgggaccaaagcgatact 10719393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 7714410 - 7714523
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||||||||| ||| |||||||||| |||| ||||||||||||| |||||||||   ||| ||| ||||||||| |||||||     
T  7714410 aattaaattaacagaaaggaccaaactgata-tttaaataaacttaagggacctaaacggactttttatta--catgagactaaaccgatatttgaaata 7714506  T
Q  218 aagttaagagaccaaaa 234  Q
    |||| ||| ||| ||||    
T  7714507 aagtcaagcgactaaaa 7714523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 5683024 - 5683108
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaa 102  Q
    |||||| |||| || ||||||||||||| |||||||||| |||| ||  ||| ||| |||| ||||||||||||||||| |||||    
T  5683024 cgttaatttttagtcccttaacttatttaattagtattattttgttcctttaatttttttatttagtattagtttggtccctaaa 5683108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 27334483 - 27334529
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  27334483 cgttaaattttggttctttaacttatttaattagtattagtttggtc 27334529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 15158518 - 15158473
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||    
T  15158518 gttaagttttgatcccttaacttatttaattagtattagtttggtc 15158473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 5683015 - 5682940
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttat 193  Q
    ||||||||||||| ||| |||||||   ||||||||||||| ||||| |||||||||  ||| |||| ||||||||    
T  5683015 aattaaattaatagaaaggaccaaaacgatactttaaataacgttaaaggacctaaatagatcttttgttatttat 5682940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 36077023 - 36077069
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| ||||||| |||||||||| || ||||||||||||||||||    
T  36077023 cgttaaattttggtcccttaacttaattaattagtattagtttggtc 36077069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 49186138 - 49186184
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| || |||| ||||||||||||| ||||||||||||||||||    
T  49186138 cgttaaattgtggtcccttaacttatttaattagtattagtttggtc 49186184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 35814218 - 35814133
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaa 202  Q
    |||||||||||||| ||| ||||||||  | ||||| | ||||||||| ||| | |||||||  |||||||| |||||| ||||||    
T  35814218 gaattaaattaatagaaaggaccaaaccgacactttcactaaagttaagggagcaaaacggaccttttattacttatggaaccaaa 35814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 17254585 - 17254798
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||  || ||||||||||||||||||||||  |||||||||||       ||    
T  17254585 gttaaattttggtcccttaacttatttaattagtattagtttggtcccttaacttttttaattagtattagtttggtccataaatttaacgtttttttga 17254684  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| | ||||||||||||| | ||||||||||||||||| |||||||||||||  |||||||| ||||| || |||||| |||||||||||||    
T  17254685 attaaattaacagaaaagaccaaactgacactttaaataaagttaagggacctaaacggacattttattacttatgagatcaaaccaatacttgaaatca 17254784  T
Q  219 agttaagagaccaa 232  Q
    ||||||| ||||||    
T  17254785 agttaagggaccaa 17254798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 51399444 - 51399254
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||  ||||||||||||||||||||||||| |||||||||||        ||    
T  51399444 gttaaattttggtcccttaacttatttaattagtattagtttggttccttaacttatttaattagtattagtttggtccctaaatttaacttttttttga 51399345  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||| | ||| ||||||||  ||||||||||||||||||| |||||||||| || ||||||||| ||||||||||||| ||||||    
T  51399344 attaaattaacagaaaggaccaaaccgatactttaaataaagttaagggacctaaacagactttttattacttatgggaccaaagcgatac 51399254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 35016828 - 35017011
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||| || ||||||||||||       ||    
T  35016828 gttaaattttggtcccttaacttatttaattagtattagtttggtctcttaacttatttaattagtattagtttgatccctaaatttaacgtttttttga 35016927  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaa 202  Q
    |||||||||| | ||| || |||||| |||||||||||||||||||  |||||||| |||  ||| ||||||||||||||||||    
T  35016928 attaaattaacagaaaggatcaaactgatactttaaataaagttaagagacctaaatggacctttaattatttatgggaccaaa 35017011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 24039391 - 24039601
Alignment:
Q  22 aagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaatt 121  Q
    |||||||||| ||||||||||||| |||||| |||| |||||| ||||  ||||||||||||||||||||| ||| ||||| ||||||       |||||    
T  24039391 aagttttggtcccttaacttatttaattagtgttagattggtcccttaacttatttaattagtattagtttcgtccctaaacttaacgcttttttgaatt 24039490  T
Q  122 aaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagt 221  Q
    ||||||| | ||| ||  ||||  |||||| |||||||||||| ||||||||||| |  |||||||| ||||| ||||||||| ||||||||||||||||    
T  24039491 aaattaacataaatgattaaaccgatacttaaaataaagttaagggacctaaacgaaccttttattacttatgagaccaaaccaatacttgaaatcaagt 24039590  T
Q  222 taagagaccaa 232  Q
    |||| ||||||    
T  24039591 taagggaccaa 24039601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 55620323 - 55620199
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| ||||||||| ||||||| ||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  55620323 gaattaaattaacagaaaggaccaaactgatacttttaataaagttaagggacctaaacagactttttattacttatgggaccaaaccgatacttgaaat 55620224  T
Q  217 caagttaagagaccaaaatagcatt 241  Q
    ||||||||| |||||||| ||||||    
T  55620223 caagttaagggaccaaaagagcatt 55620199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 55627627 - 55627503
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| ||||||||| ||||||| ||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  55627627 gaattaaattaacagaaaggaccaaactgatacttttaataaagttaagggacctaaacagactttttattacttatgggaccaaaccgatacttgaaat 55627528  T
Q  217 caagttaagagaccaaaatagcatt 241  Q
    ||||||||| |||||||| ||||||    
T  55627527 caagttaagggaccaaaagagcatt 55627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 14251424 - 14251234
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||||||| ||||  ||||| ||||||||||| ||||||||||||| |||||        ||    
T  14251424 gttaaattttggtcccttatcttatttaattagtattagtttggtcccttaacttattcaattagtattaatttggtcgctaaacttaacatttttttga 14251325  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||| ||| || |||||  ||||||||||||||||||| |||||||||||||  |||||||| |||  |||||||| ||||||    
T  14251324 attaaattaatagaaaggatcaaaccgatactttaaataaagttaagggacctaaacggaccttttattacttagaggaccaaagcgatac 14251234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 1113340 - 1113225
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| ||||||||| ||||||||||||||||||| |||||||||| || ||||||||| |||||||||||| ||||||||||||||    
T  1113340 gaattaaattaacagaaacgaccaaactgatactttaaataaagttaagggacctaaacagactttttattacttatgggaccaacccgatacttgaaat 1113241  T
Q  217 caagttaagagaccaa 232  Q
    ||||||||| ||||||    
T  1113240 caagttaagggaccaa 1113225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 36215824 - 36215664
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    ||||||||||||||||||||||||  ||||| ||||||       |||||||||||| | ||| ||||||||  ||||||||||||||||||| | | ||    
T  36215824 ttatttaattagtattagtttggtatctaaacttaacgtttttttgaattaaattaacagaaaggaccaaaccgatactttaaataaagttaaggaatct 36215725  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    |||||||  |||||||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  36215724 aaacggaccttttattacttatgggaccaaaccgatacttgaaattaagttaagggaccaa 36215664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 44304121 - 44304311
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||| | ||||| ||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||  |||| |||||        ||    
T  44304121 gttaaattttgatcccttatcttatttaattagtattagtttggtcccttaacttatttaattagtattagtttggtccttaaacttaacatttttttga 44304220  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||| | ||| || |||||  ||||||||||||||||||| |||||||||||||  |||||||| |||||| |||||| ||||||    
T  44304221 attaaattaacataaaggatcaaaccgatactttaaataaagttaagggacctaaacggaccttttattacttatggcaccaaagcgatac 44304311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 24039380 - 24039272
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||||| |||||| |||||  |||||||||||||| |||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  24039380 gaattaaattaatagaaaagatcaaaccgatactttaaataaaattaaaggacctaaacgaactttttattacttatgggaccaaaccgatacttgaaat 24039281  T
Q  217 caagttaag 225  Q
    |||||||||    
T  24039280 caagttaag 24039272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 234
Target Start/End: Original strand, 29430083 - 29430259
Alignment:
Q  58 tttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaata 157  Q
    ||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       |||||||||||| | ||| |||| |||| ||||||||||||    
T  29430083 tttggtcccttaacttatttaattagtattagtttggtccctaaacttaacgtttttttgaattaaattaacagaaaggaccgaactgatactttaaata 29430182  T
Q  158 aagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaaaa 234  Q
    || |||| ||| ||||||  |  |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||    
T  29430183 aaattaagggatctaaacataccttttattacttatgggaccaaaccaatacttaaaatcaagttaagggaccaaaa 29430259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 8607904 - 8607791
Alignment:
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    |||||||||| | ||| || |||||  ||||||||||||||||||| |||| ||||||||  |||||||| |||||||| ||||||||||||||||||||    
T  8607904 attaaattaacagaaaggatcaaaccgatactttaaataaagttaagggacttaaacggaccttttattacttatgggatcaaaccgatacttgaaatca 8607805  T
Q  219 agttaagagaccaa 232  Q
    ||||||||||||||    
T  8607804 agttaagagaccaa 8607791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 48018785 - 48018625
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    |||||||||||||||||||||||||  |||| |||||        |||||||||||||| ||| || ||||   |||||||||||||| |||| ||| ||    
T  48018785 ttatttaattagtattagtttggtccttaaacttaacatttttttgaattaaattaatagaaatgatcaaatcgatactttaaataaaattaagggatct 48018686  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    |||| ||| |||||||| || |||||||||||||||| || ||||||||||||||||||||    
T  48018685 aaacagatattttattacttttgggaccaaaccgatattttaaatcaagttaagagaccaa 48018625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 1113370 - 1113529
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    |||||||||||||||||||||||||  |||| ||| ||       |||||||||||| ||||  ||||||||  ||||||||||| ||||||| ||||||    
T  1113370 ttatttaattagtattagtttggtccgtaaacttaccgtttttt-gaattaaattaacaaaagggaccaaaccgatactttaaatgaagttaagggacct 1113468  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    |||| ||  ||||| |||||||||||||||| | |||||||||||||||||||| ||||||    
T  1113469 aaacagaccttttaatatttatgggaccaaatcaatacttgaaatcaagttaagggaccaa 1113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 29430067 - 29429945
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||||||||||| | ||||||||||||||||||  ||| ||||||||| ||||| ||| |||  |||||||||||||| |||||||    
T  29430067 gaattaaattaagagaaaagaccaaattgatactttaaataaagttaggggatctaaacggactttttcttactta--ggaccaaaccgatatttgaaat 29429970  T
Q  217 caagttaagagaccaaaatagcatt 241  Q
    ||||||||| |||||||| ||||||    
T  29429969 caagttaagggaccaaaagagcatt 29429945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 49905909 - 49905766
Alignment:
Q  66 cttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaac 165  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||        ||||||||||| | ||| || |||||  |||||||||||||||||||     
T  49905909 cttatcttatttaattagtattagtttggtccctaaacttaacgttttttttaattaaattaacagaaatgatcaaaccgatactttaaataaagttaag 49905810  T
Q  166 ggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||||  |||||||| ||||| ||||||| ||||||    
T  49905809 ggacctaaacggaccttttattacttatgagaccaaagcgatac 49905766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 51024585 - 51024676
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacg 109  Q
    |||||| ||||||| |||||| |||||| ||||||||||| |||||| ||||  ||||||||||||||||||||||||| ||||| ||||||    
T  51024585 cgttaaattttggtcccttaatttatttaattagtattaggttggtctcttagcttatttaattagtattagtttggtccctaaacttaacg 51024676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 14251433 - 14251526
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||| ||||||| ||||||||||| ||||| | |||||  |||||||| ||||||||||||| |||||||    
T  14251433 gaattaaattaacagaaaggaccaaactgatactttcaataaagttaaaggaccaatacggaccttttattacttatgggaccaaagcgatact 14251526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 44304112 - 44304019
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| ||||| |||||||  |||||||| ||||||||||||| |||||||    
T  44304112 gaattaaattaacagaaaggaccaaaccgatactttcaataaagttaagggaccaaaacggaccttttattacttatgggaccaaagcgatact 44304019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 51024576 - 51024464
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| ||| ||||| ||||||||||||| ||||| | || |||||| |  |||||||| ||||||||||||| | ||||||||||||    
T  51024576 aattaaattaacagaaaggactaaactgatactttaaataatgttaaggaacttaaacgaaacttttattacttatgggaccaaatcaatacttgaaatc 51024477  T
Q  218 aagttaagagacca 231  Q
     ||||||| |||||    
T  51024476 -agttaagggacca 51024464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 55561222 - 55561290
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttat 186  Q
    ||||||||||||||||||||  ||||  ||||||||||||||||||| |||||||||| ||| ||||||    
T  55561222 aattaaattaataaaaaagataaaaccgatactttaaataaagttaagggacctaaacagatattttat 55561290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 43099452 - 43099363
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgata 208  Q
    |||||||| |||| ||| |||||||   ||||||||||||||||||| |||||||||||||  |||||||| |||||| | ||||||||||    
T  43099452 aattaaatcaatagaaatgaccaaaacgatactttaaataaagttaa-ggacctaaacggaccttttattacttatggaatcaaaccgata 43099363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 35016820 - 35016727
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    ||||||||||||   ||| ||||||||  ||||||| ||||||||||| ||||| ||||||| ||||||||| |||||||  |||| |||||||    
T  35016820 gaattaaattaaccgaaaggaccaaaccgatactttcaataaagttaagggaccaaaacggactttttattacttatggggtcaaagcgatact 35016727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 55561148 - 55561041
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | |||  || ||||| |||||||||||||||||||  ||||| | |  | ||||||||| |||||| ||||||| |||  ||||||||    
T  55561148 aattaaattaacagaaataacaaaactgatactttaaataaagttaagagaccttagcaaactttttattacttatggaaccaaactgatgtttgaaatc 55561049  T
Q  218 aagttaag 225  Q
    ||||||||    
T  55561048 aagttaag 55561041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 29430075 - 29430121
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtc 64  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  29430075 cgttaaattttggtcccttaacttatttaattagtattagtttggtc 29430121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 17728799 - 17728867
Alignment:
Q  25 ttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttg 93  Q
    ||||||| |||||| |||| | |||||||||||||||||| ||||  ||||||||||| ||||| ||||    
T  17728799 ttttggtcccttaatttatataattagtattagtttggtcccttaacttatttaattaatattaatttg 17728867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 51399453 - 51399545
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||| | ||  ||||||||   |||||||| ||||||||| ||||| |||||||  |||||||| ||| ||||||||| ||||||    
T  51399453 gaattaaattaacataagggaccaaaccgttactttaactaaagttaagggaccaaaacggaccttttattacttaagggaccaaagcgatac 51399545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 36215884 - 36215939
Alignment:
Q  147 tactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaa 202  Q
    |||||| |||||||||||  || ||||||||| ||||||||||||| |||||||||    
T  36215884 tactttcaataaagttaagcgaactaaacggactttttattatttaagggaccaaa 36215939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 17254556 - 17254514
Alignment:
Q  194 gggaccaaaccgatacttgaaatcaagttaagagaccaaaata 236  Q
    |||| |||||||||||||||||| |||||||| ||||||||||    
T  17254556 gggatcaaaccgatacttgaaataaagttaagggaccaaaata 17254514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 36215846 - 36215801
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggt 63  Q
    |||||| |||| || ||||||||||||| |||||||||||||||||    
T  36215846 cgttaaattttagtcccttaacttatttaattagtattagtttggt 36215801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 43099519 - 43099479
Alignment:
Q  20 ttaagttttggttccttaacttatttcattagtattagttt 60  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    
T  43099519 ttaaattttggtcccttaacttatttaattagtattagttt 43099479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 14662500 - 14662691
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||  ||||||||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||| ||||| ||||||       |    
T  14662500 cgttaaattttggccccttaacttatttaattagtattagtttggttacttaacttatttaattagtattagtttggtccctaaacttaacgtttttttg 14662599  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||| | ||| ||||||||  ||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  14662600 aattaaattaacagaaaggaccaaaccgatactttaaataaagttaagggacctaaacggtttttttattacttatgggaccaaagcgatac 14662691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 35463708 - 35463892
Alignment:
Q  25 ttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaa 124  Q
    ||||||| ||||||||||||| |||||||||||||||||  ||||  ||||||||||||||||||||||||| |||||||||||        ||||||||    
T  35463708 ttttggtcccttaacttatttaattagtattagtttggttccttaacttatttaattagtattagtttggtccctaaatttaacatttttttgaattaaa 35463807  T
Q  125 ttaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||| | ||| ||||||||  ||||||||||||||||||| ||||| |||| || ||||||||| ||||||||||||| ||||||    
T  35463808 ttaacagaaaggaccaaaccgatactttaaataaagttaagggaccgaaacagactttttattacttatgggaccaaagcgatac 35463892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 18968736 - 18968531
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| |||||||| |||| ||||||||||||| | || ||||  |||||||||||||||||| |||||  ||||| ||||||       |    
T  18968736 cgttaaattttggtcccttaactgatttaattagtattagtt-gttcccttaacttatttaattagtattagcttggtt-ctaaacttaacgtttttttg 18968639  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    |||||||| || ||||  ||||||||  ||||||||||||||||||| |||||||||||||| |||||||  |||||  |||||||| ||||||||||||    
T  18968638 aattaaatcaacaaaagggaccaaaccgatactttaaataaagttaagggacctaaacggatcttttattgattatgaaaccaaaccaatacttgaaatc 18968539  T
Q  218 aagttaag 225  Q
    ||||||||    
T  18968538 aagttaag 18968531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 18508662 - 18508851
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||| ||||||| ||||||| ||||||||||  |||  |||||||||||||||||||||| |  ||||| ||||||       ||    
T  18508662 gttaaattttggt-ccttatcttatttaattagtactagtttggtcttttaacttatttaattagtattagtttgatttctaaacttaacgtttttttga 18508760  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||| | |||||| |||||  ||||||||||||||||||| | |||||||| || ||||||||||||||||||||||| ||||||    
T  18508761 attaaattaacagaaaagatcaaaccgatactttaaataaagttaaggaacctaaacagactttttattatttatgggaccaaatcgatac 18508851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 8417689 - 8417565
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| ||||| ||| ||||||||||||||||||| |||||||||||||  |||||||| || || || ||||||||||||||||||    
T  8417689 gaattaaattaacagaaatgaccagactgatactttaaataaagttaagggacctaaacggaacttttattacttgtgagatcaaaccgatacttgaaat 8417590  T
Q  217 caagttaagagaccaaaatagcatt 241  Q
    ||||||||| |||||||| ||||||    
T  8417589 caagttaagggaccaaaagagcatt 8417565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 8417697 - 8417849
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| |||||||  |||||||||||| ||||||||||||||||||  |||  ||||||||||||| ||||||| ||| ||||| ||||||       |    
T  8417697 cgttaaattttggtctcttaacttatttaattagtattagtttggtcctttaacttatttaattagttttagtttagtccctaaacttaacgcttttttg 8417796  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacc 170  Q
    |||||||||||   ||| |||||||||||||||||||||||| |||| |||||    
T  8417797 aattaaattaactgaaaggaccaaactaatactttaaataaaattaagggacc 8417849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 9990130 - 9989971
Alignment:
Q  72 ttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacct 171  Q
    ||||||||||||||||| ||||||| ||||| ||||||       |||||||||||| | ||  || |||||  ||||||||||||||||||| ||||||    
T  9990130 ttatttaattagtattaatttggtccctaaacttaacgtttttttgaattaaattaacagaagggatcaaaccgatactttaaataaagttaagggacct 9990031  T
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaa 232  Q
    ||||  |  |||||||| |||| ||||||||||||| ||| ||||||||||||| ||||||    
T  9990030 aaacataccttttattaattat-ggaccaaaccgattcttaaaatcaagttaagggaccaa 9989971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 36207413 - 36207519
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    ||||||||||||   ||| ||| ||||  |||||||||||||| |||||||| || |||| ||||||||||| ||||| || ||||||| ||||||||||    
T  36207413 gaattaaattaaccgaaaggactaaaccgatactttaaataaaattaacggatcttaacgaattttttattacttatgtgatcaaaccggtacttgaaat 36207512  T
Q  217 caagtta 223  Q
    |||||||    
T  36207513 caagtta 36207519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 18968767 - 18968847
Alignment:
Q  145 aatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    ||||||||| |||||||||| ||| | ||||  |  ||||||||||||||||| |||||||||||||||||||||||||||    
T  18968767 aatactttatataaagttaagggatccaaacataccttttattatttatgggatcaaaccgatacttgaaatcaagttaag 18968847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 1983486 - 1983579
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| || || |||||||  |||||||| ||||||||||||| |||||||    
T  1983486 gaattaaattaacagaaaggaccaaaccgatacttttaataaagttaaggggccaaaacggaccttttattacttatgggaccaaagcgatact 1983579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 9990161 - 9990262
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| | ||| |||||| |  ||||||||||||||||||| |||||||||| ||| ||| ||||||||||  | ||||| ||||||| |||||    
T  9990161 aattaaattaacataaaggaccaatccgatactttaaataaagttaagggacctaaacagatctttcattatttatgaaatcaaactgatacttaaaatc 9990260  T
Q  218 aa 219  Q
    ||    
T  9990261 aa 9990262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 17115556 - 17115649
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||| ||||||| ||| ||||||| ||||| ||||| |  |||||||| ||||||||||||| |||||||    
T  17115556 gaattaaattaacagaaaggaccaaactgatactttcaatcaagttaagggaccaaaacgaaccttttattacttatgggaccaaaacgatact 17115649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 18508654 - 18508561
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| |||||||| |||||||| ||||||| ||| | ||| ||| |||  |||||||| |||||||| |||| |||||||    
T  18508654 gaattaaattaacagaaaggaccaaaccaatactttcaataaagctaaggaaccaaaatggaccttttattacttatgggatcaaagcgatact 18508561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 14662492 - 14662403
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgat 207  Q
    |||||||||||||| ||  ||||||||   |||||||||||||||||| ||||| ||||| |  |||||||| ||| ||||||||| ||||    
T  14662492 gaattaaattaatagaagggaccaaaccgttactttaaataaagttaa-ggaccaaaacgaaccttttattacttaagggaccaaagcgat 14662403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 17115548 - 17115488
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttattta 78  Q
    |||||| ||||| | ||||| ||||||| |||||||||||||||||| ||||  |||||||    
T  17115548 cgttaaattttgatcccttatcttatttaattagtattagtttggtcccttaacttattta 17115488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 12702066 - 12702271
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||||||| ||||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||       ||    
T  12702066 gttaaattttggtcccttaacttatttaattagtat-agtttggtcccttaacttatttaattagtattagtttggtctctaaacttaacgtttttttga 12702164  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatca 218  Q
    || ||||||| ||||| ||||| ||  ||| ||||||||||||||| |||||||||||||  |||||||| |||||||||||||||||||||||| ||||    
T  12702165 atgaaattaacaaaaaggaccagaccgatattttaaataaagttaagggacctaaacggaccttttattacttatgggaccaaaccgatacttgatatca 12702264  T
Q  219 agttaag 225  Q
    |||||||    
T  12702265 agttaag 12702271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 25946054 - 25945864
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||||||| ||||  ||||||||||| ||||||||||||| ||||| ||||||       ||    
T  25946054 gttaaattttggtcccttatcttatttaattagtattagtttggtcccttaacttatttaattaatattagtttggtccctaaacttaacgtttttttga 25945955  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||   ||| || |||||| ||||||||||||||||||| |||||||||| ||| |||||||| ||||||||||||| ||||||    
T  25945954 attaaattaactgaaaggatcaaactgatactttaaataaagttaagggacctaaacagatcttttattacttatgggaccaaagcgatac 25945864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 2217744 - 2217969
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| | ||||||||||| ||||||||||||||| || ||||  |||||| ||||||||||||||| ||  |||| ||||||       |    
T  2217744 cgttaaattttggtacattaacttatttaattagtattagtttgatctcttagcttattttattagtattagtttgctccttaaacttaacgtttttttg 2217843  T
Q  118 aattaaa-ttaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    ||||||| |||| | ||| || |||| | ||||||||||||||||||| |||| ||||||||  |||||||| |||||||||||||||  ||||||||||    
T  2217844 aattaaaattaacagaaatgatcaaattgatactttaaataaagttaagggacataaacggacattttattacttatgggaccaaaccattacttgaaat 2217943  T
Q  217 caagttaagagaccaaaatagcattaa 243  Q
    ||||||||| |||||||| ||||||||    
T  2217944 caagttaag-gaccaaaagagcattaa 2217969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 12702057 - 12701950
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| |||||||| |||||||||||| ||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  12702057 gaattaaattaacagaaaggaccaaaccaatactttaaatgaagttaagggacctaaacggaccttttattacttatgggaccaaaccgatacttgaaat 12701958  T
Q  217 caagttaa 224  Q
    ||||||||    
T  12701957 caagttaa 12701950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 36065427 - 36065267
Alignment:
Q  34 cttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaa 133  Q
    |||| ||||||| |||||||||||||||||| ||||  ||||||||||||||| ||||||||| ||||| ||||||       |||||||||||| | ||    
T  36065427 cttatcttatttaattagtattagtttggtcccttaacttatttaattagtataagtttggtccctaaacttaacgtttttttgaattaaattaacagaa 36065328  T
Q  134 aagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatg 194  Q
    | || |||||  ||||||||||||||||||| |||||||||||||| |||||||| |||||    
T  36065327 aggatcaaaccgatactttaaataaagttaagggacctaaacggatcttttattacttatg 36065267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 16203672 - 16203482
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| | ||| ||||||| ||||||||||||||||||  |||  ||||||||||||||||| ||||||| ||||| ||||||       ||    
T  16203672 gttaaattttggtcctttatcttatttaattagtattagtttggtcctttaacttatttaattagtattaatttggtccctaaacttaacgtttttttga 16203573  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||| ||| || |||||  ||||||||||||||||||| |||| ||||||||  |||||||| ||| | || |||| ||||||    
T  16203572 attaaattaatagaaatgatcaaaccgatactttaaataaagttaagggacttaaacggaccttttattacttacgagatcaaagcgatac 16203482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 12261061 - 12261176
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| |||||| |  | ||||||||||||||||| ||| |||||||||  |||||||  ||||| |||||||||||||||||||||    
T  12261061 gaattaaattaaaagaaaggaccaagccgacactttaaataaagttaagggagctaaacggaccttttattgcttatgtgaccaaaccgatacttgaaat 12261160  T
Q  217 caagttaagagaccaa 232  Q
    ||||||||| ||||||    
T  12261161 caagttaagggaccaa 12261176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 21304457 - 21304350
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||||||| | ||| ||| ||||| ||| |||||||||||||||  || ||||||| |  |||||||| ||||||||||||||||||| |||||||    
T  21304457 gaattaaattaacagaaaggactaaactgata-tttaaataaagttaagcgatctaaacgaacattttattacttatgggaccaaaccgatatttgaaat 21304359  T
Q  217 caagttaag 225  Q
    |||||||||    
T  21304358 caagttaag 21304350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 38978852 - 38978944
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||||||||| | ||| ||||||||| ||||||||||||||||||| ||||| ||||| | |||||||||  |||||||||||| ||||||    
T  38978852 gaattaaattaacagaaaggaccaaactgatactttaaataaagttaagggacccaaacgaactttttattacatatgggaccaaagcgatac 38978944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 10373228 - 10373066
Alignment:
Q  34 cttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaa 133  Q
    |||| ||||||| |||||||||||||||||| ||||  |||||||||||||||||||||| ||  |||| | ||||       ||||||||| || | ||    
T  10373228 cttatcttatttaattagtattagtttggtcccttaacttatttaattagtattagtttgatccttaaactcaacgtttttttgaattaaatcaacagaa 10373129  T
Q  134 aagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatggg 196  Q
    | || ||||  ||||||||||||| ||||||   || ||||| ||| ||||||||||||||||    
T  10373128 aggatcaaaacaatactttaaatacagttaagccacataaacagatcttttattatttatggg 10373066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 10373252 - 10373345
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| ||||| |||||||| |||||||| ||| ||||||||| |||||||    
T  10373252 gaattaaattaacagaaaggaccaaaccgatactttcaataaagttaagggaccaaaacggatcttttattacttaggggaccaaagcgatact 10373345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 16581519 - 16581389
Alignment:
Q  66 cttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnn-gaattaaattaataaaaaagaccaaactaatactttaaataaagttaa 164  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||         |||||||||||| | ||| || |||||  |||||||||||||||||||    
T  16581519 cttatcttatttaattagtattagtttggtccctaaacttaacattttttttgaattaaattaacagaaaggatcaaaccgatactttaaataaagttaa 16581420  T
Q  165 cggacctaaacggattttttattatttatgg 195  Q
     |||||||||||||  |||||||| ||||||    
T  16581419 gggacctaaacggaccttttattacttatgg 16581389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 16203680 - 16203773
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| || |||||  ||||||| ||||||||||| ||||| |||||||  |||||||| ||||||||||||| |||||||    
T  16203680 gaattaaattaacagaaaggatcaaaccgatactttcaataaagttaagggaccaaaacggaccttttattacttatgggaccaaagcgatact 16203773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 36065451 - 36065544
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| ||||| |||||||  |||||||| ||||| ||||||| |||||||    
T  36065451 gaattaaattaacagaaaggaccaaaccgatactttcaataaagttaagggaccaaaacggaccttttattacttatgagaccaaaacgatact 36065544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 3568500 - 3568603
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    |||||||| ||| | ||| |||||||   |||||| ||||||||||||   || |||| |||  ||||||||||||||||| ||||||||||||||||||    
T  3568500 gaattaaaataacacaaaggaccaaagccatacttaaaataaagttaataaacttaaatggaccttttattatttatgggatcaaaccgatacttgaaat 3568599  T
Q  217 caag 220  Q
    ||||    
T  3568600 caag 3568603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 12261053 - 12260983
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtatta 88  Q
    |||||| ||||||| ||||||||||||| |||||| ||||||||||| ||||  || |||||||| |||||    
T  12261053 cgttaaattttggtcccttaacttatttaattagttttagtttggtcccttaacttgtttaattaatatta 12260983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 25946063 - 25946148
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaa 202  Q
    ||||||||||||   ||| |||||||| ||||||||  |||||||||| ||||| |||| ||  |||||||| |||||| ||||||    
T  25946063 gaattaaattaaccgaaaggaccaaaccaatactttctataaagttaagggaccaaaacagaccttttattacttatggaaccaaa 25946148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 2217688 - 2217644
Alignment:
Q  181 ttttattatttatgggaccaaaccgatacttgaaatcaagttaag 225  Q
    |||||||| |||||| ||||||||||||  |||||||||||||||    
T  2217688 ttttattacttatggaaccaaaccgatatctgaaatcaagttaag 2217644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 26171 - 26001
Alignment:
Q  39 cttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnngaattaaattaataaaaaagac 138  Q
    ||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||| ||||||       |||||||||||| | ||| ||     
T  26171 cttatttaattagtattagttttgtcccttaatttatttaattagtattagtttggtccctaaacttaacgtttttttgaattaaattaacagaaaggat 26072  T
Q  139 caaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatac 209  Q
    |||||  ||||||||||||||||||| |||| |||||  | ||||||||| ||||||||||||| ||||||    
T  26071 caaaccgatactttaaataaagttaagggacttaaacaaactttttattacttatgggaccaaagcgatac 26001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 26200 - 26293
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    |||||||||||| | ||| ||||||||  ||||||| ||||||||||| ||||| |||||||  |||||||| ||||||||||||| |||||||    
T  26200 gaattaaattaacagaaaggaccaaaccgatactttcaataaagttaagggaccaaaacggaccttttattacttatgggaccaaaacgatact 26293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 959147 - 959335
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| ||||| ||||||| |||| ||||||||||||| ||||  ||||||||||||||||| ||||||| ||||| ||||||            
T  959147 cgttaaattttggtcccttatcttatttaattaatattagtttggtcccttaacttatttaattagtattaatttggtccctaaacttaacgttttttt- 959245  T
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgat 207  Q
    ||||||||||| | ||| ||  ||||| ||||||||||||||||||| ||||||||||| |  |||||||| ||||||||||||| ||||    
T  959246 aattaaattaacagaaaggattaaactgatactttaaataaagttaagggacctaaacgaaccttttattacttatgggaccaaagcgat 959335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 1211624 - 1211416
Alignment:
Q  18 cgttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnng 117  Q
    |||||| ||||||| ||||||||||||| ||| ||| ||||||||||| |||  ||||||||||||||||||||||||  ||||| ||||||            
T  1211624 cgttaaattttggtcccttaacttatttaatt-gtactagtttggtcatttaacttatttaattagtattagtttggtacctaaacttaacgtttttttt 1211526  T
Q  118 --aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaa 215  Q
      ||||||||||| ||||  ||||||||  |||||||||||||| ||||  ||||||||||||  ||||||||  ||||||| ||||| ||||||| |||    
T  1211525 ttaattaaattaacaaaagggaccaaaccgatactttaaataaaattaaatgacctaaacggaccttttattacatatgggatcaaactgatacttcaaa 1211426  T
Q  216 tcaagttaag 225  Q
    ||||||||||    
T  1211425 tcaagttaag 1211416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 1211633 - 1211747
Alignment:
Q  118 aattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    ||||||||||| ||||  ||||| || |||||||||||||||||||| ||| |||||| ||| |||||||| ||||| |||||||| |||||||||||||    
T  1211633 aattaaattaacaaaatggaccataccaatactttaaataaagttaagggatctaaacagatcttttattacttatgagaccaaacagatacttgaaatc 1211732  T
Q  218 aagttaagagaccaa 232  Q
    |||||||| ||||||    
T  1211733 aagttaagggaccaa 1211747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 959110 - 959046
Alignment:
Q  146 atactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatact 210  Q
    ||||||| ||||||||||| ||||| |||||||  |||||||| ||||||||| ||| |||||||    
T  959110 atactttcaataaagttaagggaccaaaacggaccttttattacttatgggactaaagcgatact 959046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 12825830 - 12825768
Alignment:
Q  172 aaacggattttttattatttatgggaccaaaccgatacttgaaatcaagttaagagaccaaaa 234  Q
    ||||||| ||||||||||||| |||||||| ||||||||  ||||  ||||||| ||||||||    
T  12825830 aaacggagtttttattatttaagggaccaatccgatactaaaaatatagttaagggaccaaaa 12825768  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 21611990 - 21611953
Alignment:
Q  172 aaacggattttttattatttatgggaccaaaccgatac 209  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  21611990 aaacggattttttattaattatgggaccaaatcgatac 21611953  T

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Target: scaffold0009 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 233672 - 233776
Alignment:
Q  120 ttaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatcaa 219  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||| ||| |||||||||| |||||||| |||||| ||||||||||   ||||||||||    
T  233672 ttaaattaatagaaaaaaccaaactgatactttaaataaagttaagggatctaaacggatcttttattacttatggaaccaaaccgaagattgaaatcaa 233771  T
Q  220 gttaa 224  Q
    |||||    
T  233772 gttaa 233776  T

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Target: scaffold0009; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 233663 - 233539
Alignment:
Q  117 gaattaaattaataaaaaagaccaaactaatactttaaataaagttaacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaat 216  Q
    ||||||| |||| |||||  | |||||| ||  ||||||||||||||| ||| |||||||||| |||||||| |||| | || |||||||||||||||||    
T  233663 gaattaagttaacaaaaataatcaaactgatgttttaaataaagttaagggatctaaacggatcttttattacttatagaactaaaccgatacttgaaat 233564  T
Q  217 caagttaagagaccaaaatagcatt 241  Q
    ||||||||  || ||||| ||||||    
T  233563 caagttaaacgatcaaaagagcatt 233539  T

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Target: scaffold0130 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 25392 - 25592
Alignment:
Q  19 gttaagttttggttccttaacttatttcattagtattagtttggtcacttattttatttaattagtattagtttggtcgctaaatttaacgnnnnnnnga 118  Q
    ||||| ||||||| ||||||||||||| |||| ||| ||||||||| ||||  ||||||||||| |||||||||| || |||||||||| |        |    
T  25392 gttaaattttggt-ccttaacttatttaattattataagtttggtcccttaacttatttaattaatattagtttgatccctaaatttaatgtttttttta 25490  T
Q  119 attaaattaataaaaaagaccaaactaatactttaaataaagtt-aacggacctaaacggattttttattatttatgggaccaaaccgatacttgaaatc 217  Q
    |||||||||| | ||  || |||||  |||||||||| |||||| || ||||||||||||||  ||||||| ||||| || ||||| |||||||||||||    
T  25491 attaaattaacagaagggatcaaaccgatactttaaacaaagttaaaaggacctaaacggatcatttattacttatgagatcaaactgatacttgaaatc 25590  T
Q  218 aa 219  Q
    ||    
T  25591 aa 25592  T

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