View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12183_low_1 (Length: 676)

Name: NF12183_low_1
Description: NF12183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12183_low_1
NF12183_low_1
[»] chr7 (22 HSPs)
chr7 (139-438)||(25025999-25026291)
chr7 (550-662)||(25025692-25025814)
chr7 (438-523)||(25025839-25025924)
chr7 (438-505)||(48007530-48007597)
chr7 (438-475)||(30296344-30296381)
chr7 (445-505)||(26009294-26009354)
chr7 (438-474)||(27544968-27545004)
chr7 (438-474)||(41029283-41029319)
chr7 (438-505)||(1051997-1052064)
chr7 (438-505)||(37230011-37230078)
chr7 (18-59)||(25026372-25026414)
chr7 (438-476)||(46675917-46675955)
chr7 (438-475)||(7872761-7872798)
chr7 (438-475)||(21050235-21050272)
chr7 (438-503)||(23413031-23413096)
chr7 (438-471)||(30844393-30844426)
chr7 (438-474)||(2618690-2618726)
chr7 (438-474)||(8615034-8615070)
chr7 (438-474)||(12212285-12212321)
chr7 (438-474)||(18714459-18714495)
chr7 (438-474)||(21322186-21322222)
chr7 (438-474)||(46987097-46987133)
[»] chr3 (23 HSPs)
chr3 (438-505)||(1149052-1149119)
chr3 (441-510)||(25902794-25902864)
chr3 (438-505)||(7961715-7961782)
chr3 (438-505)||(27397595-27397662)
chr3 (439-505)||(27143058-27143124)
chr3 (438-474)||(33771701-33771737)
chr3 (438-474)||(48315038-48315074)
chr3 (438-505)||(2153484-2153551)
chr3 (438-505)||(10594688-10594755)
chr3 (438-505)||(49604924-49604991)
chr3 (443-505)||(28130917-28130979)
chr3 (438-472)||(51250249-51250283)
chr3 (438-475)||(35191830-35191867)
chr3 (438-475)||(36431820-36431857)
chr3 (438-474)||(2105712-2105748)
chr3 (438-474)||(16663250-16663286)
chr3 (440-472)||(17035929-17035961)
chr3 (438-470)||(21967567-21967599)
chr3 (438-470)||(21990003-21990035)
chr3 (438-474)||(28266727-28266763)
chr3 (438-474)||(37465371-37465407)
chr3 (446-482)||(47747800-47747836)
chr3 (438-474)||(53633631-53633667)
[»] chr1 (22 HSPs)
chr1 (438-505)||(17283962-17284029)
chr1 (437-505)||(10132427-10132495)
chr1 (438-505)||(45139989-45140056)
chr1 (440-505)||(30937488-30937553)
chr1 (438-473)||(9872120-9872155)
chr1 (438-477)||(13794519-13794558)
chr1 (438-473)||(47719122-47719157)
chr1 (438-475)||(16580812-16580849)
chr1 (438-471)||(24631850-24631883)
chr1 (438-475)||(28039873-28039910)
chr1 (438-474)||(9427431-9427467)
chr1 (438-474)||(10843335-10843371)
chr1 (438-474)||(12182861-12182897)
chr1 (441-473)||(20481585-20481617)
chr1 (438-474)||(29800544-29800580)
chr1 (442-482)||(31092676-31092716)
chr1 (438-474)||(32560984-32561020)
chr1 (438-474)||(38448880-38448916)
chr1 (438-474)||(44507944-44507980)
chr1 (441-473)||(45418078-45418110)
chr1 (438-474)||(49875613-49875649)
chr1 (438-474)||(50638930-50638966)
[»] chr2 (29 HSPs)
chr2 (438-504)||(35685045-35685111)
chr2 (438-474)||(21482533-21482569)
chr2 (438-505)||(5980238-5980305)
chr2 (438-505)||(18910516-18910583)
chr2 (441-482)||(12231891-12231932)
chr2 (438-470)||(36547253-36547285)
chr2 (438-505)||(4897554-4897621)
chr2 (438-505)||(4944948-4945015)
chr2 (438-477)||(6141231-6141270)
chr2 (446-481)||(9389487-9389522)
chr2 (438-505)||(18324877-18324944)
chr2 (438-505)||(27152364-27152431)
chr2 (440-505)||(10065486-10065551)
chr2 (438-475)||(15654882-15654919)
chr2 (438-475)||(19179063-19179100)
chr2 (440-505)||(24579651-24579716)
chr2 (438-475)||(35372952-35372989)
chr2 (438-475)||(43117203-43117240)
chr2 (442-474)||(4138006-4138038)
chr2 (442-474)||(5137819-5137851)
chr2 (442-474)||(7772474-7772506)
chr2 (438-474)||(12124556-12124592)
chr2 (438-474)||(12124695-12124731)
chr2 (438-470)||(14925250-14925282)
chr2 (437-473)||(19095129-19095165)
chr2 (438-474)||(24593387-24593423)
chr2 (442-482)||(32091177-32091217)
chr2 (438-474)||(40099397-40099433)
chr2 (445-477)||(41813021-41813053)
[»] chr4 (25 HSPs)
chr4 (440-505)||(11166699-11166764)
chr4 (438-505)||(5360263-5360330)
chr4 (441-505)||(30420856-30420920)
chr4 (438-470)||(54151643-54151675)
chr4 (438-473)||(20921857-20921892)
chr4 (438-473)||(30380541-30380576)
chr4 (438-473)||(38416068-38416103)
chr4 (438-505)||(44200539-44200605)
chr4 (438-471)||(8027414-8027447)
chr4 (438-475)||(20096283-20096320)
chr4 (438-503)||(33900709-33900774)
chr4 (440-505)||(38374970-38375035)
chr4 (438-475)||(49949345-49949382)
chr4 (438-475)||(50442760-50442797)
chr4 (438-474)||(4059250-4059286)
chr4 (438-474)||(7230291-7230327)
chr4 (438-474)||(19908703-19908739)
chr4 (437-505)||(29808251-29808319)
chr4 (438-474)||(29908067-29908103)
chr4 (438-474)||(34247451-34247487)
chr4 (438-474)||(46676512-46676548)
chr4 (437-473)||(51004038-51004074)
chr4 (438-474)||(53190306-53190342)
chr4 (438-474)||(56204958-56204994)
chr4 (438-474)||(56551606-56551642)
[»] chr5 (13 HSPs)
chr5 (438-505)||(26677285-26677352)
chr5 (438-505)||(26948894-26948961)
chr5 (438-474)||(3671229-3671265)
chr5 (438-505)||(33753947-33754014)
chr5 (438-481)||(36623181-36623224)
chr5 (438-475)||(11017187-11017224)
chr5 (438-475)||(22498953-22498990)
chr5 (438-471)||(41417774-41417807)
chr5 (438-474)||(866041-866077)
chr5 (438-474)||(16133079-16133115)
chr5 (438-474)||(16531289-16531325)
chr5 (438-470)||(31198720-31198752)
chr5 (438-474)||(33645703-33645739)
[»] chr6 (7 HSPs)
chr6 (438-475)||(20381122-20381159)
chr6 (438-473)||(28757039-28757074)
chr6 (438-505)||(29283826-29283893)
chr6 (441-471)||(13583563-13583593)
chr6 (438-503)||(26181700-26181765)
chr6 (438-505)||(7273061-7273129)
chr6 (438-474)||(31971540-31971576)
[»] chr8 (17 HSPs)
chr8 (438-505)||(1244688-1244755)
chr8 (438-505)||(7553690-7553757)
chr8 (438-473)||(8984509-8984544)
chr8 (438-505)||(29908022-29908089)
chr8 (438-505)||(33451333-33451399)
chr8 (438-475)||(8442500-8442537)
chr8 (438-475)||(17704024-17704061)
chr8 (438-471)||(23816801-23816834)
chr8 (438-475)||(30623304-30623341)
chr8 (438-474)||(7968954-7968990)
chr8 (438-474)||(9070969-9071005)
chr8 (441-505)||(10871781-10871845)
chr8 (438-470)||(11759036-11759068)
chr8 (438-474)||(19778076-19778112)
chr8 (438-474)||(31888037-31888073)
chr8 (438-505)||(37999402-37999470)
chr8 (438-474)||(42208483-42208519)
[»] scaffold0262 (1 HSPs)
scaffold0262 (442-475)||(15943-15976)
[»] scaffold0117 (1 HSPs)
scaffold0117 (438-471)||(18304-18337)
[»] scaffold0083 (1 HSPs)
scaffold0083 (438-471)||(45954-45987)
[»] scaffold0238 (1 HSPs)
scaffold0238 (438-474)||(25400-25436)
[»] scaffold0126 (1 HSPs)
scaffold0126 (438-474)||(34902-34938)
[»] scaffold0040 (1 HSPs)
scaffold0040 (438-474)||(56795-56831)
[»] scaffold0026 (1 HSPs)
scaffold0026 (438-474)||(75336-75372)


Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 139 - 438
Target Start/End: Complemental strand, 25026291 - 25025999
Alignment:
Q  139 catatataatgcttctcgagacaaacataaattctatgacaatgaattattagcaagcatgtctgaag-aaattccttatcttcaagaaaagtaacgtga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25026291 catatataatgcttctcgagacaaacataaattctatgacaatgaattattagcaagcatgtctgaagaaaattccttatcttcaagaaaagtaacgtga 25026192  T
Q  238 aaatattccaaaatacaacaaccattaacaatcnnnnnnnnnnnnggaggggaactattaaacaatgattgaattgtgagttatgagcttgcagaaaaga 337  Q
    |||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||      |||||||||||||||    
T  25026191 aaatattccaaaatacaacaaccattaacaatc--ttttttttttggaggggaactattaaacaatgattgaattgtga------agcttgcagaaaaga 25026100  T
Q  338 gtattattaaaaaatcaaataaccgttgcaacttgcaatggtctagtggtaactttttctggtaaaagaaaatcaaatataagcaattcagctaacatta 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25026099 gtattattaaaaaatcaaataaccgttgcaacttgcaatggtctagtggtaactttttctggtaaaagaaaatcaaatataagcaattcagctaacatta 25026000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 550 - 662
Target Start/End: Complemental strand, 25025814 - 25025692
Alignment:
Q  550 catttaaaatgtagaatgtaggtatgtc---cttcactgatga-------gtttaagaagtccgtgaataaagaagtatgtaggacagtaccttaattaa 639  Q
    ||||||||||||||||||||||||||||   ||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25025814 catttaaaatgtagaatgtaggtatgtcgtccttcactgatgactgatgagtttaagaagtccgtgaataaagaagtgtgtaggacagtaccttaattaa 25025715  T
Q  640 gagatttgtcaccctctcacaca 662  Q
    |||||||||||||||||||||||    
T  25025714 gagatttgtcaccctctcacaca 25025692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 523
Target Start/End: Complemental strand, 25025924 - 25025839
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacacca-caaaaaaacccaattttacctaacac 523  Q
    ||||||| |||| ||||| ||||||||||||||||||||| |||  ||| || |||| || ||||||||||||||||||||||||||    
T  25025924 tcagttgataagaataatatataatatatgcaaggtctagggttcgaaccct-gacatcatcaaaaaaacccaattttacctaacac 25025839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 48007597 - 48007530
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||||| || |||| |||||||||||||||||| |||||| ||| | ||||||||| ||||||    
T  48007597 tcagttggtaatgacaatgcataatatatgcaaggtctggagtttgaacccaggacaccaccaaaaaa 48007530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 30296344 - 30296381
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||||||||||||||||||||||    
T  30296344 tcagttggtaaggacaatgtataatatatgcaaggtct 30296381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 505
Target Start/End: Original strand, 26009294 - 26009354
Alignment:
Q  445 gtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||| |||| |||||||||||||||||| | |||  ||||| ||||||||||||||||    
T  26009294 gtaaggaaaatgcataatatatgcaaggtctggggttcgaactccggacaccacaaaaaaa 26009354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 27544968 - 27545004
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| ||||||||||||||||||||||    
T  27544968 tcagttggtaaggacaatgtataatatatgcaaggtc 27545004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 41029283 - 41029319
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| ||||||||||||||||||||||    
T  41029283 tcagttggtaaggacaatgtataatatatgcaaggtc 41029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 1052064 - 1051997
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||| | |||||||||||||| ||||||| | ||||| ||| | ||| ||||||||||||    
T  1052064 tcagttggtaagaacaatgtataatatatacaaggtccatagtttgaaccccggaaaccacaaaaaaa 1051997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 37230078 - 37230011
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| |||| |||||||||||||||||| | |||  || ||| |||| ||||||||||    
T  37230078 tcagttggtaaggaaaatgcataatatatgcaaggtctggggttcaaattctagacatcacaaaaaaa 37230011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 25026414 - 25026372
Alignment:
Q  18 agatactggtaaatgcaacaa-taatagaggccaaactttttc 59  Q
    ||||||||||||||||||||| ||||||||| |||||||||||    
T  25026414 agatactggtaaatgcaacaattaatagagggcaaactttttc 25026372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 476
Target Start/End: Original strand, 46675917 - 46675955
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtcta 476  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  46675917 tcagttggtaaggacaatgtataaaatatgcaaggtcta 46675955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 7872798 - 7872761
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  7872798 tcagttggtaaggacaatgcataatatatgcaaggtct 7872761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 21050272 - 21050235
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  21050272 tcagttggtaaggacaatgcataatatatgcaaggtct 21050235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 503
Target Start/End: Complemental strand, 23413096 - 23413031
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaa 503  Q
    |||||||||| ||| |||| |||||||||||||||||  |||||  ||||| || |||||||||||    
T  23413096 tcagttggtatggacaatgcataatatatgcaaggtcgggagttcaaactcgggccaccacaaaaa 23413031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Complemental strand, 30844426 - 30844393
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaag 471  Q
    |||||||||||||||||| |||||||||||||||    
T  30844426 tcagttggtaaggataatatataatatatgcaag 30844393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 2618690 - 2618726
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  2618690 tcagttggtaaggacaatgcataatatatgcaaggtc 2618726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 8615034 - 8615070
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  8615034 tcagttggtaaggacaatgcataatatatgcaaggtc 8615070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 12212285 - 12212321
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||||||||  |||||||||||||||||||||    
T  12212285 tcagttggtaaggacgatgtataatatatgcaaggtc 12212321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 18714459 - 18714495
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  18714459 tcagttggtaaggacaatgcataatatatgcaaggtc 18714495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 21322186 - 21322222
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  21322186 tcagttggtaaggataatgcataatgtatgcaaggtc 21322222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 46987097 - 46987133
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  46987097 tcagttggtaaggacaatgcataatatatgcaaggtc 46987133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 1149119 - 1149052
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| |||| |||||||||||||||||||| |||  ||| ||||||||||||||||||    
T  1149119 tcagttggtaaggacaatgcataatatatgcaaggtctagggttcgaaccctggacaccacaaaaaaa 1149052  T

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Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 25902794 - 25902864
Alignment:
Q  441 gttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacacca-caaaaaaacccaa 510  Q
    ||||||||||||||||||||||||||||||||||| | |||  |||  ||||||||| |||||||||||||    
T  25902794 gttggtaaggataatgtataatatatgcaaggtctggggttcgaaccttggacaccaccaaaaaaacccaa 25902864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 7961782 - 7961715
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| ||||||||||||||||| |||| ||  ||  ||||| ||||||||||||||||    
T  7961782 tcagttggtaaggacaatgtataatatatgcagggtccaggattcgaactccggacaccacaaaaaaa 7961715  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 27397662 - 27397595
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| ||| ||||||||||||||||||||||||  |||  ||| | ||||||||||||||||    
T  27397662 tcagttggtatggacaatgtataatatatgcaaggtctaaggttcgaaccccggacaccacaaaaaaa 27397595  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 439 - 505
Target Start/End: Original strand, 27143058 - 27143124
Alignment:
Q  439 cagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||  ||  | ||||||||||||||||    
T  27143058 cagttggtaaggacaatgtataatatatgtaaggtctagggttcgaatcccggacaccacaaaaaaa 27143124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 33771701 - 33771737
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33771701 tcagttggtaaggacaatgtataatatatgcaaggtc 33771737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 48315074 - 48315038
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||||||||||||| |||||||||||||||||    
T  48315074 tcagttggtaaggataatgcataatatatgcaaggtc 48315038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 2153551 - 2153484
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||  ||| |||| |||||||||||||||||| | |||| ||| |||| |||||||||||||    
T  2153551 tcagttggtttggacaatgcataatatatgcaaggtctggggtttaaaccctggccaccacaaaaaaa 2153484  T

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Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 10594688 - 10594755
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| |||| |||||||||||||||| ||| |||  |||  ||||||||| |||||||    
T  10594688 tcagttggtaaggacaatgcataatatatgcaaggtttagggttcaaaccttggacaccaaaaaaaaa 10594755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 49604991 - 49604924
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||| ||||| ||||||||||||||||||||| ||| |||  ||| | || |||||||||||||    
T  49604991 tcagttggcaaggacaatgtataatatatgcaaggtatagtgttcaaaccccggccaccacaaaaaaa 49604924  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 443 - 505
Target Start/End: Complemental strand, 28130979 - 28130917
Alignment:
Q  443 tggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||| |||| |||||||||||||||||| | |||| ||  | ||||||||||||||||    
T  28130979 tggtaaggacaatgcataatatatgcaaggtctggggtttgaatcccggacaccacaaaaaaa 28130917  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 472
Target Start/End: Complemental strand, 51250283 - 51250249
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaagg 472  Q
    |||||||||||||| ||||||||||||||||||||    
T  51250283 tcagttggtaaggacaatgtataatatatgcaagg 51250249  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 35191867 - 35191830
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  35191867 tcagttggtaaggacaatgcataatatatgcaaggtct 35191830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 36431820 - 36431857
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  36431820 tcagttggtagggataatgtataatatatgcaatgtct 36431857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 2105748 - 2105712
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||  ||||||||||||||||||||||||    
T  2105748 tcagttggtaaaaataatgtataatatatgcaaggtc 2105712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 16663286 - 16663250
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||| |||||||| |||||||||||||||||    
T  16663286 tcagttggtatggataatgcataatatatgcaaggtc 16663250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 472
Target Start/End: Complemental strand, 17035961 - 17035929
Alignment:
Q  440 agttggtaaggataatgtataatatatgcaagg 472  Q
    |||||||||||||||||||||||||||| ||||    
T  17035961 agttggtaaggataatgtataatatatgtaagg 17035929  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 470
Target Start/End: Original strand, 21967567 - 21967599
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaa 470  Q
    |||||||||||||| ||||||||||||||||||    
T  21967567 tcagttggtaaggacaatgtataatatatgcaa 21967599  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 470
Target Start/End: Original strand, 21990003 - 21990035
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaa 470  Q
    |||||||||||||| ||||||||||||||||||    
T  21990003 tcagttggtaaggacaatgtataatatatgcaa 21990035  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 28266727 - 28266763
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  28266727 tcagttggtaaggacaatgcataatatatgcaaggtc 28266763  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 37465371 - 37465407
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||| |||| |||||||||||||||||||||||||    
T  37465371 tcagtttgtaacgataatgtataatatatgcaaggtc 37465407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 446 - 482
Target Start/End: Complemental strand, 47747836 - 47747800
Alignment:
Q  446 taaggataatgtataatatatgcaaggtctagagttt 482  Q
    |||||||||||||||||||||||||| | ||||||||    
T  47747836 taaggataatgtataatatatgcaagatatagagttt 47747800  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 53633667 - 53633631
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  53633667 tcagttggtaaggataatgcataatatatgtaaggtc 53633631  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 17283962 - 17284029
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| |||| ||||||||||||||||| || |||  ||| ||||||||||||||||||    
T  17283962 tcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaaccctggacaccacaaaaaaa 17284029  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 505
Target Start/End: Complemental strand, 10132495 - 10132427
Alignment:
Q  437 atcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||||||||| |||| |||||||||||||||||| | |||  |||  |||||||||||||||||    
T  10132495 atcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccttggacaccacaaaaaaa 10132427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 45140056 - 45139989
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||| ||| | || |||||||||||||    
T  45140056 tcagttggtatggacaatgcataatatatgcaaggtccagagtttaaaccccggccaccacaaaaaaa 45139989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 505
Target Start/End: Original strand, 30937488 - 30937553
Alignment:
Q  440 agttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||| |||||| ||||||||||||||||||||||| | |||  ||||| |||||||| |||||||    
T  30937488 agttgataaggacaatgtataatatatgcaaggtctggggttcgaactccggacaccataaaaaaa 30937553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 473
Target Start/End: Complemental strand, 9872155 - 9872120
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggt 473  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9872155 tcagttggtaaggataatgcataatatatgcaaggt 9872120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 477
Target Start/End: Complemental strand, 13794558 - 13794519
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctag 477  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  13794558 tcagttgataaggataatgcataatatatgcaaggtctag 13794519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 473
Target Start/End: Complemental strand, 47719157 - 47719122
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggt 473  Q
    ||||||||||||||||||| ||||||||||||||||    
T  47719157 tcagttggtaaggataatgcataatatatgcaaggt 47719122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 16580849 - 16580812
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  16580849 tcagttggtatggacaatgtataatatatgcaaggtct 16580812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Original strand, 24631850 - 24631883
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaag 471  Q
    ||||||||||||||||||| ||||||||||||||    
T  24631850 tcagttggtaaggataatgcataatatatgcaag 24631883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 28039910 - 28039873
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  28039910 tcagttggtaaggacaatgcataatatatgcaaggtct 28039873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 9427431 - 9427467
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  9427431 tcagttggtaaggataatgaataaaatatgcaaggtc 9427467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 10843371 - 10843335
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  10843371 tcagttgataaggataatgcataatatatgcaaggtc 10843335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 12182861 - 12182897
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  12182861 tcagttggtaagggtaatatataatatatgcaaggtc 12182897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 20481617 - 20481585
Alignment:
Q  441 gttggtaaggataatgtataatatatgcaaggt 473  Q
    ||||||||||| |||||||||||||||||||||    
T  20481617 gttggtaaggacaatgtataatatatgcaaggt 20481585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 29800544 - 29800580
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  29800544 tcagttggtaaggataatgcataaaatatgcaaggtc 29800580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 482
Target Start/End: Original strand, 31092676 - 31092716
Alignment:
Q  442 ttggtaaggataatgtataatatatgcaaggtctagagttt 482  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  31092676 ttggtaaggataatgcataatatatgtaaggtctggagttt 31092716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 32560984 - 32561020
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  32560984 tcagttggtatggacaatgtataatatatgcaaggtc 32561020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 38448916 - 38448880
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  38448916 tcagttggtaaggacaatgcataatatatgcaaggtc 38448880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 44507980 - 44507944
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  44507980 tcagttggttaggacaatgtataatatatgcaaggtc 44507944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 45418110 - 45418078
Alignment:
Q  441 gttggtaaggataatgtataatatatgcaaggt 473  Q
    |||||||||||||||| ||||||||||||||||    
T  45418110 gttggtaaggataatgcataatatatgcaaggt 45418078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 49875649 - 49875613
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  49875649 tcagttggtaaggacaatgcataatatatgcaaggtc 49875613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 50638966 - 50638930
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  50638966 tcagttggtaaggacaatgcataatatatgcaaggtc 50638930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 504
Target Start/End: Complemental strand, 35685111 - 35685045
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaa 504  Q
    |||||||||||||| |||| |||||||||||||||||||| |||  |||| |||||||||| |||||    
T  35685111 tcagttggtaaggacaatgcataatatatgcaaggtctagggttcgaactttggacaccaccaaaaa 35685045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 21482569 - 21482533
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||||||||||||||||||||||||||    
T  21482569 tcagttggtaaggataatgtataatatatgcaaggtc 21482533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 5980238 - 5980305
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||| |||||| |||| ||||||||||||||||||| ||||  |||  |||||||||||||||||    
T  5980238 tcagttgataaggacaatgcataatatatgcaaggtctaaagttcgaacattggacaccacaaaaaaa 5980305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 18910583 - 18910516
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| || | ||||||||||||||| |||| |||  ||| ||||||||||||||||||    
T  18910583 tcagttggtaaggacaacgcataatatatgcaaggcctagggttcgaaccctggacaccacaaaaaaa 18910516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 12231891 - 12231932
Alignment:
Q  441 gttggtaaggataatgtataatatatgcaaggtctagagttt 482  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  12231891 gttggtaaggataatgcataatatatgcaaggtccagagttt 12231932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 470
Target Start/End: Complemental strand, 36547285 - 36547253
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaa 470  Q
    |||||||||||||||||||||||||||||||||    
T  36547285 tcagttggtaaggataatgtataatatatgcaa 36547253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 4897554 - 4897621
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| |||| |||||||||||||||| ||  |||  ||| |||| |||||||||||||    
T  4897554 tcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaaccctggccaccacaaaaaaa 4897621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 4944948 - 4945015
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| |||| |||||||||||||||| ||  |||  ||| |||| |||||||||||||    
T  4944948 tcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaaccctggccaccacaaaaaaa 4945015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 477
Target Start/End: Original strand, 6141231 - 6141270
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctag 477  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  6141231 tcagttggtaaggacaatgcataatatatgcaaggtctag 6141270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 481
Target Start/End: Original strand, 9389487 - 9389522
Alignment:
Q  446 taaggataatgtataatatatgcaaggtctagagtt 481  Q
    |||||||||||||||||||||||||||||| |||||    
T  9389487 taaggataatgtataatatatgcaaggtctggagtt 9389522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 18324944 - 18324877
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| |||| |||||||||||||| |||||  ||  ||| ||| ||||||||||||||    
T  18324944 tcagttggtaaggacaatgcataatatatgcaagatctaggattcgaaccctgaacaccacaaaaaaa 18324877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 27152364 - 27152431
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| |||||||| |||||||||||||||||| | |||  ||| | ||||||||| ||||||    
T  27152364 tcagttggtagggataatgcataatatatgcaaggtctggggttcgaacccaggacaccaccaaaaaa 27152431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 505
Target Start/End: Original strand, 10065486 - 10065551
Alignment:
Q  440 agttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||| |||| |||||||||||||| |  || |||  ||| ||||||||||||||||||    
T  10065486 agttggtaaggacaatgcataatatatgcaagtttcagggttcgaaccctggacaccacaaaaaaa 10065551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 15654919 - 15654882
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  15654919 tcagttggtaaggataatgcataaaatatgcaaggtct 15654882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 19179100 - 19179063
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  19179100 tcagttggtaaggacaatgcataatatatgcaaggtct 19179063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 505
Target Start/End: Complemental strand, 24579716 - 24579651
Alignment:
Q  440 agttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||  ||| |||| ||||||||||||||||| || |||  |||||||| |||||||||||||    
T  24579716 agttggtttggacaatgcataatatatgcaaggtccagggttcaaactctggccaccacaaaaaaa 24579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 35372989 - 35372952
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  35372989 tcagttggtaaggacaatatataatatatgcaaggtct 35372952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 43117240 - 43117203
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  43117240 tcagttggtaaggacaatgcataatatatgcaaggtct 43117203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 474
Target Start/End: Original strand, 4138006 - 4138038
Alignment:
Q  442 ttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||| ||||||||||||||||||||||    
T  4138006 ttggtaaggacaatgtataatatatgcaaggtc 4138038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 474
Target Start/End: Complemental strand, 5137851 - 5137819
Alignment:
Q  442 ttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||| ||||||||||||||||||||||    
T  5137851 ttggtaaggacaatgtataatatatgcaaggtc 5137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 474
Target Start/End: Complemental strand, 7772506 - 7772474
Alignment:
Q  442 ttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||||||||||| |||||||||||||||||    
T  7772506 ttggtaaggataatgcataatatatgcaaggtc 7772474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 12124556 - 12124592
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  12124556 tcagttggtaaggacaatgcataatatatgcaaggtc 12124592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 12124695 - 12124731
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  12124695 tcagttggtaaggacaatgcataatatatgcaaggtc 12124731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 470
Target Start/End: Complemental strand, 14925282 - 14925250
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaa 470  Q
    |||||||||||||| ||||||||||||||||||    
T  14925282 tcagttggtaaggacaatgtataatatatgcaa 14925250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 437 - 473
Target Start/End: Original strand, 19095129 - 19095165
Alignment:
Q  437 atcagttggtaaggataatgtataatatatgcaaggt 473  Q
    |||||||||||||||||||| | ||||||||||||||    
T  19095129 atcagttggtaaggataatgcagaatatatgcaaggt 19095165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 24593387 - 24593423
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  24593387 tcagttggtaaggacaatgcataatatatgcaaggtc 24593423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 482
Target Start/End: Complemental strand, 32091217 - 32091177
Alignment:
Q  442 ttggtaaggataatgtataatatatgcaaggtctagagttt 482  Q
    |||||||||| |||| |||||||||||||||||||| ||||    
T  32091217 ttggtaaggaaaatgcataatatatgcaaggtctagggttt 32091177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 40099433 - 40099397
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  40099433 tcagttggtaaggacaatgcataatatatgcaaggtc 40099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 445 - 477
Target Start/End: Original strand, 41813021 - 41813053
Alignment:
Q  445 gtaaggataatgtataatatatgcaaggtctag 477  Q
    ||||||| |||||||||||||||||||||||||    
T  41813021 gtaaggacaatgtataatatatgcaaggtctag 41813053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 505
Target Start/End: Original strand, 11166699 - 11166764
Alignment:
Q  440 agttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||| ||||||||||||||||||||||||  |||  ||| | ||||||||||||||||    
T  11166699 agttggtaaggacaatgtataatatatgcaaggtctaaggttcgaaccccggacaccacaaaaaaa 11166764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 5360330 - 5360263
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||||||||| ||| ||||| |||||||||||| | |||  |||||||||||| |||||||||    
T  5360330 tcagttggtaaggatcatgcataatgtatgcaaggtctggtgttcaaactctggacactacaaaaaaa 5360263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 505
Target Start/End: Original strand, 30420856 - 30420920
Alignment:
Q  441 gttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||||| ||||||||||||||| ||||||||| |||  ||| ||||||||| | ||||||    
T  30420856 gttggtaaggacaatgtataatatatgtaaggtctagggttcgaaccctggacaccgccaaaaaa 30420920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 470
Target Start/End: Complemental strand, 54151675 - 54151643
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaa 470  Q
    |||||||||||||||||||||||||||||||||    
T  54151675 tcagttggtaaggataatgtataatatatgcaa 54151643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 473
Target Start/End: Complemental strand, 20921892 - 20921857
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggt 473  Q
    |||||||| |||||||||||||||||||||||||||    
T  20921892 tcagttggcaaggataatgtataatatatgcaaggt 20921857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 473
Target Start/End: Original strand, 30380541 - 30380576
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggt 473  Q
    |||||||||||||| |||||||||||||||||||||    
T  30380541 tcagttggtaaggacaatgtataatatatgcaaggt 30380576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 473
Target Start/End: Original strand, 38416068 - 38416103
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggt 473  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38416068 tcagttggtaaggataatgcataatatatgcaaggt 38416103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 44200605 - 44200539
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||  ||| | || |||||||||||||    
T  44200605 tcagttggta-ggataatgtataaaatatgcaaggtctatagttcaaacaccggccaccacaaaaaaa 44200539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Complemental strand, 8027447 - 8027414
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaag 471  Q
    ||||||||||||||||||| ||||||||||||||    
T  8027447 tcagttggtaaggataatgcataatatatgcaag 8027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 20096320 - 20096283
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  20096320 tcagttggtagggataatgcataatatatgcaaggtct 20096283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 503
Target Start/End: Complemental strand, 33900774 - 33900709
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaa 503  Q
    |||||||||||||| |||| |||||||||||||| ||| |||||  || |  ||||||||||||||    
T  33900774 tcagttggtaaggacaatgcataatatatgcaagatctggagttcgaattacggacaccacaaaaa 33900709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 505
Target Start/End: Original strand, 38374970 - 38375035
Alignment:
Q  440 agttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||| ||| |||| |||||||||||||||||| |||||  ||| | || |||||||||||||    
T  38374970 agttggtagggacaatgcataatatatgcaaggtctggagttcaaaccccggccaccacaaaaaaa 38375035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 49949345 - 49949382
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  49949345 tcagttggtaaggacaatgcataatatatgcaaggtct 49949382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 50442797 - 50442760
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  50442797 tcagttggtagggataatgcataatatatgcaaggtct 50442760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 4059286 - 4059250
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  4059286 tcagttgggaaggacaatgtataatatatgcaaggtc 4059250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 7230291 - 7230327
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  7230291 tcagttggtaaggacaatgcataatatatgcaaggtc 7230327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 19908703 - 19908739
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  19908703 tcagttggtaaggacaatgcataatatatgcaaggtc 19908739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 437 - 505
Target Start/End: Complemental strand, 29808319 - 29808251
Alignment:
Q  437 atcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||| |||||| |||| |||||||||||||||| | | |||  |||  |||||||||||||||||    
T  29808319 atcagttgataaggacaatgcataatatatgcaaggtatggggttcgaaccttggacaccacaaaaaaa 29808251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 29908067 - 29908103
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  29908067 tcagttggtaaggacaatgcataatatatgcaaggtc 29908103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 34247451 - 34247487
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  34247451 tcagttggtaaggacaatgcataatatatgcaaggtc 34247487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 46676548 - 46676512
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  46676548 tcagttggtaaggacaatgcataatatatgcaaggtc 46676512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 437 - 473
Target Start/End: Complemental strand, 51004074 - 51004038
Alignment:
Q  437 atcagttggtaaggataatgtataatatatgcaaggt 473  Q
    ||||||||||||| | |||||||||||||||||||||    
T  51004074 atcagttggtaagaacaatgtataatatatgcaaggt 51004038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 53190306 - 53190342
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||| |||||||| |||||||||||||||||    
T  53190306 tcagttggtatggataatgcataatatatgcaaggtc 53190342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 56204958 - 56204994
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  56204958 tcagttggtaaggacaatgcataatatatgcaaggtc 56204994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 56551642 - 56551606
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  56551642 tcagttggtaaggacaatgcataatatatgcaaggtc 56551606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 26677352 - 26677285
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| | | ||||||||||||||||||| |||||| ||| ||||| || |||||||||||||    
T  26677352 tcagttggtatgaagaatgtataatatatgcaagatctagaatttgaactccggccaccacaaaaaaa 26677285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 26948961 - 26948894
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| | | ||||||||||||||||||| |||||| ||| ||||| || |||||||||||||    
T  26948961 tcagttggtatgaagaatgtataatatatgcaagatctagaatttgaactccggccaccacaaaaaaa 26948894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 3671229 - 3671265
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    ||||||| |||||||||||||||||||||||||||||    
T  3671229 tcagttgataaggataatgtataatatatgcaaggtc 3671265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 33754014 - 33753947
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||| ||| || ||||||||||||||| || ||||||| ||| |||| || ||||||||||||||    
T  33754014 tcagttgataaagacaatgtataatatatgtaaagtctagaatttaaactgtgaacaccacaaaaaaa 33753947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 481
Target Start/End: Complemental strand, 36623224 - 36623181
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagtt 481  Q
    ||||||| |||| |||||| ||||||||||||||||||||||||    
T  36623224 tcagttgataagaataatgcataatatatgcaaggtctagagtt 36623181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 11017187 - 11017224
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  11017187 tcagttggtagggataatgcataatatatgcaaggtct 11017224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 22498953 - 22498990
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  22498953 tcagttggtaaggacaatgcataatatatgcaaggtct 22498990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Original strand, 41417774 - 41417807
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaag 471  Q
    |||||||||| |||||||||||||||||||||||    
T  41417774 tcagttggtagggataatgtataatatatgcaag 41417807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 866077 - 866041
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  866077 tcagttggtatggataatgtataaaatatgcaaggtc 866041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 16133115 - 16133079
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  16133115 tcagttggtaaggacaatgcataatatatgcaaggtc 16133079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 16531325 - 16531289
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  16531325 tcagttggtaaggacaatgcataatatatgcaaggtc 16531289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 470
Target Start/End: Original strand, 31198720 - 31198752
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaa 470  Q
    ||||||||||||||||||| |||||||||||||    
T  31198720 tcagttggtaaggataatgcataatatatgcaa 31198752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 33645739 - 33645703
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  33645739 tcagttggtatggacaatgtataatatatgcaaggtc 33645703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 20381159 - 20381122
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20381159 tcagttggtatggataatgtataatatatgcaaggtct 20381122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 473
Target Start/End: Complemental strand, 28757074 - 28757039
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggt 473  Q
    |||||||||||||| |||||||||||||||||||||    
T  28757074 tcagttggtaaggacaatgtataatatatgcaaggt 28757039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 29283826 - 29283893
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||||  || ||||||||||||||||||||||||| |||  ||||| |  |||||||||||||    
T  29283826 tcagttggtagagacaatgtataatatatgcaaggtctagggttcaaactccgaccaccacaaaaaaa 29283893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 13583563 - 13583593
Alignment:
Q  441 gttggtaaggataatgtataatatatgcaag 471  Q
    |||||||||||||||||||||||||||||||    
T  13583563 gttggtaaggataatgtataatatatgcaag 13583593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 503
Target Start/End: Complemental strand, 26181765 - 26181700
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaa 503  Q
    |||||| ||||||| |||| ||||||| | |||| |||||||||  ||| ||||||||||||||||    
T  26181765 tcagttagtaaggacaatgcataatatcttcaagatctagagttcgaaccctggacaccacaaaaa 26181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 7273061 - 7273129
Alignment:
Q  438 tcagttggtaagg-ataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||||||| |||||| ||||||||||||||||||   |||  ||| || |||||||||||||||    
T  7273061 tcagttggtaagggataatgaataatatatgcaaggtctgtggttcgaaccctcgacaccacaaaaaaa 7273129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 31971540 - 31971576
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  31971540 tcagttggtaaggacaatgcataatatatgcaaggtc 31971576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000002; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 1244755 - 1244688
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||||||| |||| ||||||||| |||||||| | |||  ||| | ||||||||||||||||    
T  1244755 tcagttggtaaggacaatgcataatatatacaaggtctggggttcgaaccccggacaccacaaaaaaa 1244688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 7553690 - 7553757
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| ||| |||| ||||||||||||||||| |  |||  ||||| ||||||||||||||||    
T  7553690 tcagttggtagggacaatgcataatatatgcaaggtccaaggttcaaactccggacaccacaaaaaaa 7553757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 473
Target Start/End: Complemental strand, 8984544 - 8984509
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggt 473  Q
    |||||||||| |||||||||||||||||||||||||    
T  8984544 tcagttggtatggataatgtataatatatgcaaggt 8984509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 29908022 - 29908089
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||| || ||||  |||||| ||||||    
T  29908022 tcagttggtagggacaatgcataatatatgcaaggtccagagtttaaaatctgaccaccaccaaaaaa 29908089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 33451399 - 33451333
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    |||||||||| |||||||| ||||||||||||||||| || |||| ||| || | |||||||||||||    
T  33451399 tcagttggtatggataatgcataatatatgcaaggtcaagggtttgaaccct-gccaccacaaaaaaa 33451333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 8442537 - 8442500
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  8442537 tcagttggtaaggacaatgcataatatatgcaaggtct 8442500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 17704024 - 17704061
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  17704024 tcagttggtaaggacaatgcataatatatgcaaggtct 17704061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Original strand, 23816801 - 23816834
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaag 471  Q
    ||||||||||||||||||| ||||||||||||||    
T  23816801 tcagttggtaaggataatgcataatatatgcaag 23816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 475
Target Start/End: Original strand, 30623304 - 30623341
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  30623304 tcagttggtaaggacaatgcataatatatgcaaggtct 30623341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 7968990 - 7968954
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  7968990 tcagttggtaaggacaatgcataatatatgcaaggtc 7968954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 9070969 - 9071005
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  9070969 tcagttggtaaggacaatgtataatatatgtaaggtc 9071005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 441 - 505
Target Start/End: Complemental strand, 10871845 - 10871781
Alignment:
Q  441 gttggtaaggataatgtataatatatgcaaggtctagagttttaactctggacaccacaaaaaaa 505  Q
    ||||||||||| |||  ||||||||||||||||| || ||   |||||||| |||||||||||||    
T  10871845 gttggtaaggacaatacataatatatgcaaggtccagggtacgaactctggccaccacaaaaaaa 10871781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 470
Target Start/End: Original strand, 11759036 - 11759068
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaa 470  Q
    ||||||| |||||||||||||||||||||||||    
T  11759036 tcagttgataaggataatgtataatatatgcaa 11759068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 19778076 - 19778112
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  19778076 tcagttggtaaggacaatgcataatatatgcaaggtc 19778112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 31888037 - 31888073
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  31888037 tcagttggtaaggacaatggataatatatgcaaggtc 31888073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 37999470 - 37999402
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtctagagtt-ttaactctggacaccacaaaaaaa 505  Q
    |||||||||| |||||||| |||||||||||||||| ||| ||| | ||| | || |||||||||||||    
T  37999470 tcagttggtatggataatgcataatatatgcaaggtatagggttctaaaccccggccaccacaaaaaaa 37999402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 42208519 - 42208483
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  42208519 tcagttggtaaggacaatgcataatatatgcaaggtc 42208483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 475
Target Start/End: Complemental strand, 15976 - 15943
Alignment:
Q  442 ttggtaaggataatgtataatatatgcaaggtct 475  Q
    |||||||||| |||||||||||||||||||||||    
T  15976 ttggtaaggacaatgtataatatatgcaaggtct 15943  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Original strand, 18304 - 18337
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaag 471  Q
    |||||||||||||| |||||||||||||||||||    
T  18304 tcagttggtaaggacaatgtataatatatgcaag 18337  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 471
Target Start/End: Original strand, 45954 - 45987
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaag 471  Q
    |||||||||||| |||||||||||||||||||||    
T  45954 tcagttggtaagaataatgtataatatatgcaag 45987  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 25400 - 25436
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  25400 tcagttggtaaggacaatgcataatatatgcaaggtc 25436  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 34938 - 34902
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  34938 tcagttggtaaggacaatgcataatatatgcaaggtc 34902  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 56795 - 56831
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  56795 tcagttggtatggacaatgtataatatatgcaaggtc 56831  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 474
Target Start/End: Original strand, 75336 - 75372
Alignment:
Q  438 tcagttggtaaggataatgtataatatatgcaaggtc 474  Q
    |||||||||||||| |||| |||||||||||||||||    
T  75336 tcagttggtaaggacaatgcataatatatgcaaggtc 75372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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