View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12183_low_4 (Length: 249)
Name: NF12183_low_4
Description: NF12183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12183_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 198
Target Start/End: Original strand, 32399469 - 32399607
Alignment:
| Q |
47 |
ctgtcataaatgaggagtatcataagacaatcacaatttgtatccaactcctacataaatatgggtagactaaaatatcatttactttttcttaaagcta |
146 |
Q |
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| T |
32399469 |
ctgtcataaatgaggagtatcataagacaatcacaatttgtatccaactcctaaat-------------ctaaaatatcatttactttttcttaaagcta |
32399555 |
T |
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| Q |
147 |
cagcaacacnnnnnnncatcacgtgaagatgtaatgtttactgaataaattt |
198 |
Q |
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| T |
32399556 |
cagcaacactttttttcatcacgagaagatgtaatgtttactgaataaattt |
32399607 |
T |
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