View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12185_high_1 (Length: 1285)
Name: NF12185_high_1
Description: NF12185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12185_high_1 |
 | |
|
| [»] scaffold1439 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 1134; Significance: 0; HSPs: 51)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 1134; E-Value: 0
Query Start/End: Original strand, 12 - 1269
Target Start/End: Original strand, 22457829 - 22459086
Alignment:
| Q |
12 |
gaacctgtgagttttcaatattttccatgaaattatcagatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
111 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22457829 |
gaacctgtgagttttcaatattttccatcaaattgtcaaatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
22457928 |
T |
|
| Q |
112 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaatt |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22457929 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatgcaccagatcatgaacacaacaactttttgctcttccatcaatactaatt |
22458028 |
T |
|
| Q |
212 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcag |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
22458029 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttaccatatcatctttcacaaatccttcag |
22458128 |
T |
|
| Q |
312 |
ccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatg |
411 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22458129 |
ccatccattgccgaatcagtatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacagatcatg |
22458228 |
T |
|
| Q |
412 |
gtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaactctatatttagaatttcactaaacttataccattctgatgtatttctatctttg |
511 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458229 |
gtaaccgagacctacaattttttttatcttcaaatcttcttttaactctatatttagattttcactaaacttataccattctgatgtatttctatctttg |
22458328 |
T |
|
| Q |
512 |
caagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgtc |
611 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22458329 |
caagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaattttaaaagatatatcaataagattttctggacaacgtc |
22458428 |
T |
|
| Q |
612 |
cgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttaca |
711 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22458429 |
cgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttgttcagccaaacctttcatttcatacacttcaacaaaagaagatttcttaca |
22458528 |
T |
|
| Q |
712 |
agcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttc |
811 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22458529 |
tgcatttgcaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagctc |
22458628 |
T |
|
| Q |
812 |
catacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttggggga |
911 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458629 |
catacatcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttggggga |
22458728 |
T |
|
| Q |
912 |
gatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaa |
1011 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458729 |
gatttgctccttgttgttcgtaaaacttgtgcagcatgtccctcagcaagccttctatattgtatgattgagacactctgatccatacatgacaatcaaa |
22458828 |
T |
|
| Q |
1012 |
gtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctctc |
1111 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458829 |
gtgtttaacgatcttgttgtcgtcaaaaaccttctttgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctctc |
22458928 |
T |
|
| Q |
1112 |
tcctctaccaaccaatcaattagtatgtttcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagcctttcgaaggttctccatgt |
1211 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458929 |
tcctctatcaaccaatcaattagtatgtctcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagcctttcgaaggttctccatgt |
22459028 |
T |
|
| Q |
1212 |
tgaagtttgttgcagtactgcttgacccttgttccaaagatgattggatatgcaagct |
1269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22459029 |
tgaagtttgttgcagtactgcttgacccttgttccaaagatgattggatatgcaagct |
22459086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 1134; E-Value: 0
Query Start/End: Original strand, 12 - 1269
Target Start/End: Original strand, 22480810 - 22482067
Alignment:
| Q |
12 |
gaacctgtgagttttcaatattttccatgaaattatcagatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
111 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22480810 |
gaacctgtgagttttcaatattttccatcaaattgtcaaatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
22480909 |
T |
|
| Q |
112 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaatt |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22480910 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatgcaccagatcatgaacacaacaactttttgctcttccatcaatactaatt |
22481009 |
T |
|
| Q |
212 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcag |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
22481010 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttaccatatcatctttcacaaatccttcag |
22481109 |
T |
|
| Q |
312 |
ccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatg |
411 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22481110 |
ccatccattgccgaatcagtatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacagatcatg |
22481209 |
T |
|
| Q |
412 |
gtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaactctatatttagaatttcactaaacttataccattctgatgtatttctatctttg |
511 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481210 |
gtaaccgagacctacaattttttttatcttcaaatcttcttttaactctatatttagattttcactaaacttataccattctgatgtatttctatctttg |
22481309 |
T |
|
| Q |
512 |
caagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgtc |
611 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22481310 |
caagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaattttaaaagatatatcaataagattttctggacaacgtc |
22481409 |
T |
|
| Q |
612 |
cgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttaca |
711 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22481410 |
cgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttgttcagccaaacctttcatttcatacacttcaacaaaagaagatttcttaca |
22481509 |
T |
|
| Q |
712 |
agcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttc |
811 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22481510 |
tgcatttgcaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagctc |
22481609 |
T |
|
| Q |
812 |
catacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttggggga |
911 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481610 |
catacatcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttggggga |
22481709 |
T |
|
| Q |
912 |
gatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaa |
1011 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481710 |
gatttgctccttgttgttcgtaaaacttgtgcagcatgtccctcagcaagccttctatattgtatgattgagacactctgatccatacatgacaatcaaa |
22481809 |
T |
|
| Q |
1012 |
gtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctctc |
1111 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481810 |
gtgtttaacgatcttgttgtcgtcaaaaaccttctttgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctctc |
22481909 |
T |
|
| Q |
1112 |
tcctctaccaaccaatcaattagtatgtttcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagcctttcgaaggttctccatgt |
1211 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481910 |
tcctctatcaaccaatcaattagtatgtctcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagcctttcgaaggttctccatgt |
22482009 |
T |
|
| Q |
1212 |
tgaagtttgttgcagtactgcttgacccttgttccaaagatgattggatatgcaagct |
1269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22482010 |
tgaagtttgttgcagtactgcttgacccttgttccaaagatgattggatatgcaagct |
22482067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 58 - 1098
Target Start/End: Original strand, 22357388 - 22358428
Alignment:
| Q |
58 |
tgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaat |
157 |
Q |
| |
|
|||||||||||||||||||| ||| ||| ||||||| |||| | |||| ||||||||| |||||| ||||| | | | |||||||||||||| | |
|
|
| T |
22357388 |
tgctattgataggcgtcgaatcattccagttaaagacaattgtttgccctcagtaatattctcgcaaaagcttaaatgcttatgtttttcaaggatcatt |
22357487 |
T |
|
| Q |
158 |
gcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatc |
257 |
Q |
| |
|
|||| |||||||||||||||| ||||| |||| |||||||||||||||| |||||| ||||||||||||||| |||| || || ||| ||||||||| |
|
|
| T |
22357488 |
tcatgcactagatcatgaacacgacaacgttttactcttccatcaatactgattgaatctacttgcaccaaacttctatgtattaactcttttaaatatc |
22357587 |
T |
|
| Q |
258 |
catctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttc |
357 |
Q |
| |
|
| |||||||| ||||||| ||| || | | || | |||||| || |||||||| |||||||| ||| ||||| | |||| | ||||| || | |||| |
|
|
| T |
22357588 |
cttctgcaacctcttccatcgttctttccccatattgtttcacaaacccttcagcaatccattgtcgagtcaatgtctttgaatgaactttatagtcttc |
22357687 |
T |
|
| Q |
358 |
aggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatggtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaac |
457 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| | ||||| |||||||||||||| | |||| || || | ||| ||| | |||| |
|
|
| T |
22357688 |
aggatataatccaaaatacaagaaacatgacttgaggtagtaaggcaaatcatggtaactaaatcctaaaatttttcttattatggaatattcctctaac |
22357787 |
T |
|
| Q |
458 |
tctatatttagaatttcactaaacttataccattctgatgtatttctatctttgcaagataaaataccaccaatgagtacaattgctagtggcaatccat |
557 |
Q |
| |
|
||| ||||| | |||||||||||||||||||||| || | || |||||||| || ||||||||||||||||| ||||||||||||||| ||||| | |
|
|
| T |
22357788 |
tctgcatttatattttcactaaacttataccattccattggaattttatctttgggagctaaaataccaccaatgactacaattgctagtggtaatcctt |
22357887 |
T |
|
| Q |
558 |
tgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgtccgtttaagtcgtggaatgtcttcttattgaacaactccaaagattg |
657 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |
|
|
| T |
22357888 |
tgcattttttaacaattttggaagatatatcaataagattttctggacaacgtccatttaagtcatggaatgccttcttattgaacaactcaaaagattg |
22357987 |
T |
|
| Q |
658 |
ttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacatccatgtttcttgttgtgattaatatcttacaa |
757 |
Q |
| |
|
|||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||| || || |
|
|
| T |
22357988 |
ttctacagtcaaaccttttagttcatacacttcaacaaaagaagatttcttacaagtattcgcaacatccatgtttcttgtagtgattaatatcctagaa |
22358087 |
T |
|
| Q |
758 |
ccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaaaactataacataccttttttcctgcaagtagt |
857 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||| | |||||||| | | |||||| |||||||| |||| ||||||||||||||| |||||||||| |
|
|
| T |
22358088 |
ccctttttgttatcaatcatagcaaattcaatatcatgcaaaaaatgtgactcccatacatcatcaaacactacaacataccttttttcttgcaagtagt |
22358187 |
T |
|
| Q |
858 |
tcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcag |
957 |
Q |
| |
|
| |||||||||||||| ||||||| ||||| ||||||| | | ||| || || || | | |||||||| |||||||| | ||| |||||||||| |
|
|
| T |
22358188 |
ttctcacttcatcaactaatgactgtcgatccatttgacggagactctgaggaggaactttcctttgttgtttgtaaaactcgagcataatgtccctcaa |
22358287 |
T |
|
| Q |
958 |
caatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagtt |
1057 |
Q |
| |
|
|| | |||| ||||||||| | ||||||| | ||||||||| ||| |||||||||||| |||| ||| | ||||||||| |||||||| ||||| |
|
|
| T |
22358288 |
cactttttctgtattgtatggtcgagacaccgtaatccatacacgacgatcaaagtgttttacgacctttgggttgtcaaaaactttcttcgctagagtg |
22358387 |
T |
|
| Q |
1058 |
gtttttccttgtcctccctttccaacaatggtgacaattgt |
1098 |
Q |
| |
|
|||||||| |||||||| |||||||||||| ||||||||| |
|
|
| T |
22358388 |
gtttttcccagtcctcccattccaacaatggagacaattgt |
22358428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 12 - 1205
Target Start/End: Original strand, 22467291 - 22468481
Alignment:
| Q |
12 |
gaacctgtgagttttcaatattttccatgaaattatcagatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
111 |
Q |
| |
|
|||| ||||||||||||||| || ||| ||||||||||| | || |||||||||||||||||| ||| ||| ||||||| |||| | ||||| | |
|
|
| T |
22467291 |
gaacatgtgagttttcaataactttcattaaattatcagaggtagtttctattgataggcgtcgaatcattccagttaaagacaattgtttgtcctcagt |
22467390 |
T |
|
| Q |
112 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaatt |
211 |
Q |
| |
|
||||||||||||||||||||| || ||| |||| |||||||||| |||||| |||||||||||||||| |||||||||| |||||||||||||||| ||| |
|
|
| T |
22467391 |
aatattcttgcaaaaacttaaatcctcatatttatcaaggatcattgcatgcactagatcatgaacacgacaactttttactcttccatcaatacttatt |
22467490 |
T |
|
| Q |
212 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcag |
311 |
Q |
| |
|
||||||||||||||||||| |||| |||||| ||| |||||||||| || ||||| ||||||||||| | | || || || ||||| || ||||||| |
|
|
| T |
22467491 |
gaaactacttgcaccaaacttctatggatcaactctattaaatatccttcagcaacctcttccaatgtcctccccctgtcttccttcacaaacccttcag |
22467590 |
T |
|
| Q |
312 |
ccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatg |
411 |
Q |
| |
|
| |||||||| ||| |||| | |||| | |||||||| | ||||||||||||||||||||||||| |||||||||||||| ||||||| |||| ||| |
|
|
| T |
22467591 |
caatccattggcgagtcaacgtctttgaatgaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggttgtaaggtaaattatg |
22467690 |
T |
|
| Q |
412 |
gtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaactctatatttagaatttcactaaacttataccattctgatgtatttctatctttg |
511 |
Q |
| |
|
||||| | |||| || || | ||| | | | |||||||| ||||| | |||||||||| ||| ||||||| || |||||||| |||| |
|
|
| T |
22467691 |
gtaactaaatcctaaaatttttcttattgtggaatatccctctaactctacatttatattttcactaaatttagaccattcaattggatttctatttttg |
22467790 |
T |
|
| Q |
512 |
caagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgtc |
611 |
Q |
| |
|
| |||||||||| |||| ||| ||||||||||| || ||||| ||||| |||||||||||||| |||||||| |||| |||||||||||||||| || |
|
|
| T |
22467791 |
cgagataaaatatcaccggtgacaacaattgctagaggtaatcctttgcagttttcaacaattttggaagatatgtcaaaaagattttctggacaaactc |
22467890 |
T |
|
| Q |
612 |
cgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttaca |
711 |
Q |
| |
|
||| ||||| ||||| | |||||| || ||||| ||||| || |||||||||| |||| || ||| |||| ||||| | ||||||| ||||||||| |
|
|
| T |
22467891 |
cgtccaagtcatggaacgccttctttttaaacaattccaaggactgttcttcagataaacgttccagctcatgcactttaccaaaaga---tttcttaca |
22467987 |
T |
|
| Q |
712 |
agcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttc |
811 |
Q |
| |
|
||||| || |||| || ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||| | | | |
|
|
| T |
22467988 |
agcatctgcaacaaccttgtttctcgttgtgattaatatcttacaaccatttttgttatcaatcatagcaaattcaatatcataccaaaaatgtgaatcc |
22468087 |
T |
|
| Q |
812 |
catacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttggggga |
911 |
Q |
| |
|
||||| |||||||| |||||||||||||||||| | ||||||||||| |||||||||||||| |||| || ||||| ||| ||||| | ||| || || |
|
|
| T |
22468088 |
catacatcatcaaacactataacatacctttttccttgcaagtagtttctcacttcatcaactaatggctttcgatccatctgatggagactctgaggag |
22468187 |
T |
|
| Q |
912 |
gatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaa |
1011 |
Q |
| |
|
||| | | |||||||||| ||||| | | |||| || ||||||| |||| |||||||||||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
22468188 |
gatcttccccttgttgtttgtaaatatcgagcaaaatttccctcaacaatttttctatattgtatggtcgagacaccgtgatccatacatgacaatcaaa |
22468287 |
T |
|
| Q |
1012 |
gtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctctc |
1111 |
Q |
| |
|
|||||||||| ||| | | ||||||||| ||||| || | ||| |||||||| |||||||| ||||||| |||| ||||| ||| || || |||| |
|
|
| T |
22468288 |
atgtttaacgaccttttggttgtcaaaaactttcttggctatagtggtttttcccagtcctcccattccaactatggagacaacggtgcgctctgctctt |
22468387 |
T |
|
| Q |
1112 |
tcctctaccaaccaatcaattagtatgtttcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagcctttcgaaggttct |
1205 |
Q |
| |
|
||||||||||| ||||||| | | ||| || ||| ||||||| || |||| |||| ||||||| ||| ||||| |||| | ||||||||||| |
|
|
| T |
22468388 |
ccctctaccaacaaatcaatcaatttgtctcgtggctcttcaaatcccacaagatcagcttcatccatataaaatggagcgtctcgaaggttct |
22468481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 58 - 1176
Target Start/End: Original strand, 22442128 - 22443243
Alignment:
| Q |
58 |
tgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaat |
157 |
Q |
| |
|
|||||||||||||||||||| ||| ||| ||||||| |||| | |||| ||||||||| |||||| ||||| | | | |||||||||||||| | |
|
|
| T |
22442128 |
tgctattgataggcgtcgaatcattccagttaaagacaattgttttccctcagtaatattctcgcaaaagcttaaatgcttatgtttttcaaggatcatt |
22442227 |
T |
|
| Q |
158 |
gcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatc |
257 |
Q |
| |
|
|||| |||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| ||| || || ||||||||| |
|
|
| T |
22442228 |
tcatgcactagatcatgaacacggcaactttttactcttccatcaatactggttgaaactacttgcaccaaacttctacagattaacacttttaaatatc |
22442327 |
T |
|
| Q |
258 |
catctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttc |
357 |
Q |
| |
|
| |||||||| | ||||||||| || | | || |||||||| || |||||||| |||||||| ||| ||||| | |||| | | || | | |||| |
|
|
| T |
22442328 |
cttctgcaaccttttccaatgtcctttccccatattctttcacaaacccttcagctatccattgacgagtcaatgtctttgaacaagcttcatagtcttc |
22442427 |
T |
|
| Q |
358 |
aggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatggtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaac |
457 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||| ||| |||| || | | ||| ||| || ||| |
|
|
| T |
22442428 |
gggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcatggtaactgagtcctaaaatttttcttactatggaatattccttaaac |
22442527 |
T |
|
| Q |
458 |
t---ctatatttagaatttcactaaacttataccattctgatgtatttctatctttgcaagataaaataccaccaatgagtacaattgctagtggcaatc |
554 |
Q |
| |
|
| || ||||| | ||||| |||||| ||||||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
22442528 |
tgatctgcatttatattttcattaaactcataccattcaattgtatttctatctttgggagctaaaataccaccaatgactacaattgctagtggtaatc |
22442627 |
T |
|
| Q |
555 |
cattgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgtccgtttaagtcgtggaatgtcttcttattgaacaactccaaaga |
654 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
22442628 |
cattgcatttttcaacaattttggaagatataccaataagattttttggacaacgtccgtttaagtcatgaaatgccttcttattgaacaactccaaaga |
22442727 |
T |
|
| Q |
655 |
ttgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacatccatgtttcttgttgtgattaatatctta |
754 |
Q |
| |
|
||||||| ||| ||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| || |
|
|
| T |
22442728 |
ttgttctacagtcaaaccttttagttcgta------aacaaaagaagatttcttacaagtatttgcaacatccatgtttcttgtagtgattaatatccta |
22442821 |
T |
|
| Q |
755 |
caaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaaaactataacataccttttttcctgcaagt |
854 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||| | |||||||| | | |||||| |||||||| |||| ||||||||||||||| ||||||| |
|
|
| T |
22442822 |
gaaccctttttgttatcaatcatagcaaattcaatatcatgcaaaaaatgtgactcccatacatcatcaaacactacaacataccttttttcttgcaagt |
22442921 |
T |
|
| Q |
855 |
agttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttgttgttcgtaaaacttgtgcaacatgtccct |
954 |
Q |
| |
|
|||| |||||||||||||| ||||||| ||||| ||||||||| | ||| || || || | | |||||||| |||||||| | ||| |||||||| |
|
|
| T |
22442922 |
agtttctcacttcatcaactaatgactgtcgatccatttgatggagactctgaggaggaactttcctttgttgtttgtaaaactcgagcataatgtccct |
22443021 |
T |
|
| Q |
955 |
cagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaaga |
1054 |
Q |
| |
|
|| || | ||| |||||| ||||||||||||| ||||||||| | |||| |||||||| ||||| | ||| | | |||||||| | | || ||| |
|
|
| T |
22443022 |
caacactttttcaatattgaatgattgagacaccatgatccataaaagacagtcaaagtgcttaactaccttttggttgtcaaaaatttgtctggctaga |
22443121 |
T |
|
| Q |
1055 |
gttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctctctcctctaccaaccaatcaattagtatgtttcttggaacttcaa |
1154 |
Q |
| |
|
|| |||||||| ||||||| |||||||||||| ||||| |||| | ||||||| ||||||||||| ||||||| | | ||| |||||| |||||| |
|
|
| T |
22443122 |
gtggtttttcccaatcctcccattccaacaatggagacaactgtgcggtcttctcttccctctaccaacaaatcaatcaatttgtctcttggctcttcaa |
22443221 |
T |
|
| Q |
1155 |
agcctacaacatcatcttcatc |
1176 |
Q |
| |
|
|||| |||| |||| ||||||| |
|
|
| T |
22443222 |
agccaacaatatcagcttcatc |
22443243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 12 - 1205
Target Start/End: Original strand, 22629786 - 22630972
Alignment:
| Q |
12 |
gaacctgtgagttttcaatattttccatgaaattatcagatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
111 |
Q |
| |
|
|||| ||||||||||||||| ||| ||| |||||||||| | |||||||||||||||||| || ||| ||| ||||||| |||| | ||||| | |
|
|
| T |
22629786 |
gaacatgtgagttttcaatacttttcattaaattatcag---tagttgctattgataggcgtcaaatcattccagttaaagacaattgcttgtcctcaat |
22629882 |
T |
|
| Q |
112 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaatt |
211 |
Q |
| |
|
||||||||||||||||||||| || ||| |||| |||||||||| |||||| ||||||||||| |||| |||||||||| ||||||||| ||||| || |
|
|
| T |
22629883 |
aatattcttgcaaaaacttaaatcctcatatttctcaaggatcattgcatgcactagatcatgtacacgacaactttttactcttccat--atacttgtt |
22629980 |
T |
|
| Q |
212 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcag |
311 |
Q |
| |
|
||||||||||||||||||| ||||| || ||| ||| |||||||||| ||| |||| |||||||||||| || | | | |||||||| || ||||||| |
|
|
| T |
22629981 |
gaaactacttgcaccaaacttctacggaccaactctattaaatatccttctccaacctcttccaatgttcttcccttgacttctttcacaaacccttcag |
22630080 |
T |
|
| Q |
312 |
ccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatg |
411 |
Q |
| |
|
| |||||||| ||| |||| | |||| | |||||||| | |||||||||| |||||||||||||| |||||||||||||| ||||||| |||||||| |
|
|
| T |
22630081 |
cgatccattggcgagtcaacacctttgaacgaactatatagtcttcaggatagaatccaaaatacaagaaacatgacttgaggttgtaaggtaaatcatg |
22630180 |
T |
|
| Q |
412 |
gtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaactctatatttagaatttcactaaacttataccattctgatgtatttctatctttg |
511 |
Q |
| |
|
||||| | |||| | || | ||| ||| | |||||||| ||||| | |||||||||||||| ||||||| || ||||||| ||||| |
|
|
| T |
22630181 |
gtaactaaatcctaaattttttcttattgtggaatattcctctaactctacatttatattttcactaaacttagaccattcaattggatttctaactttg |
22630280 |
T |
|
| Q |
512 |
caagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgtc |
611 |
Q |
| |
|
| |||||||||| |||| ||| |||||||||||| || ||||| |||||||||||||||||||| |||||||| |||| |||||||||||||||| || |
|
|
| T |
22630281 |
cgagataaaatatcaccggtgactacaattgctagaggtaatcctttgcatttttcaacaattttggaagatatgtcaaaaagattttctggacaaaatc |
22630380 |
T |
|
| Q |
612 |
cgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttaca |
711 |
Q |
| |
|
| | ||||| ||||| | ||||| || ||||| |||||||| |||||||||| |||| || ||| |||| ||||| ||| ||||||||||||| |
|
|
| T |
22630381 |
catccaagtcatggaacgctttctttttaaacaattccaaagactgttcttcagataaacgttccagctcatgcactttgccaa---aagatttcttaca |
22630477 |
T |
|
| Q |
712 |
agcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttc |
811 |
Q |
| |
|
||||| || ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| |||||| ||| | | |
|
|
| T |
22630478 |
agcatctgcaacatccttgtttcttgttgtgattaatatcttacaaccatttttgttatcaatcatagcaaattcaatatcataccaaaattgtgcctcc |
22630577 |
T |
|
| Q |
812 |
catacgtcatcaaaaacta-taacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttggggg |
910 |
Q |
| |
|
||||| |||||||| |||| ||| ||||||||| | ||||||||||| |||||||||||||| |||| || ||||| ||||||||| | |||||| || |
|
|
| T |
22630578 |
catacatcatcaaacactacaaacgtacctttttccttgcaagtagtttctcacttcatcaactaatggctttcgatccatttgatggagactttgagga |
22630677 |
T |
|
| Q |
911 |
agatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaa |
1010 |
Q |
| |
|
||| | |||||||||| ||||| || | |||| |||||||||| |||| |||||||||||||| | ||||||| |||||||| |||||||||||| |
|
|
| T |
22630678 |
ggatctttcccttgttgtttgtaaatctcgagcaaaatgtccctcaacaatgtttctatattgtatggtcgagacaccgtgatccattcatgacaatcaa |
22630777 |
T |
|
| Q |
1011 |
agtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctct |
1110 |
Q |
| |
|
|||||||||||| ||| | |||||||| ||||| |||||||| ||||| || |||||||| |||||||||| | ||||| |||| | || |||| |
|
|
| T |
22630778 |
agtgtttaacgacctttcggttgtcaaaaattttcttggcaagagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctct |
22630877 |
T |
|
| Q |
1111 |
ctcctctaccaaccaatcaattagtatgtttcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagcctttcgaaggttct |
1205 |
Q |
| |
|
|||||| || ||||||||| | | ||| || ||| | |||||||| ||||||||| ||||||| | | | ||| |||| | ||||||||||| |
|
|
| T |
22630878 |
tccctctatcagccaatcaatcaatttgtctcgtggctcgtcaaagcccacaacatcagcttcatccaaatacaatggagcatctcgaaggttct |
22630972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 12 - 1086
Target Start/End: Original strand, 22435971 - 22437048
Alignment:
| Q |
12 |
gaacctgtgagttttcaatattttccatgaaattatcagatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
111 |
Q |
| |
|
|||| |||||| |||||||| |||||| | ||||| ||| ||| |||| ||||||||||||||| || | | ||||||| |||| | ||||| | |
|
|
| T |
22435971 |
gaacatgtgagctttcaataccttccattagattataagaactggttgccattgataggcgtcgagtcactctagttaaagaaaattgattgtcctcagt |
22436070 |
T |
|
| Q |
112 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaatt |
211 |
Q |
| |
|
||||||||||||||||||||| || ||| |||| |||||||||| |||||| |||| ||||||||||| |||||||||| |||||||||||||||| ||| |
|
|
| T |
22436071 |
aatattcttgcaaaaacttaaatcctcatatttctcaaggatcattgcatgcactaaatcatgaacacgacaactttttactcttccatcaatacttatt |
22436170 |
T |
|
| Q |
212 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcag |
311 |
Q |
| |
|
|||||||| |||||||||| |||| ||| ||| ||| |||||||||| | ||||| |||||||||||| || | || || ||||||||||| ||||||| |
|
|
| T |
22436171 |
gaaactacatgcaccaaacttctattgaccaactctattaaatatccttttgcaatatcttccaatgtccttcccctctcttctttcacgaacccttcag |
22436270 |
T |
|
| Q |
312 |
ccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatg |
411 |
Q |
| |
|
| |||||||| ||| ||||| | |||| | |||||||| | ||||||||||||||||||||||||| ||||| |||||||| | ||||| ||||||||| |
|
|
| T |
22436271 |
caatccattggcgagtcaatgtttttgaacgaactatatagtcttcaggatataatccaaaatacaagaaacacgacttgaggtagtaaggcaaatcatg |
22436370 |
T |
|
| Q |
412 |
gtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaact---ctatatttagaatttcactaaacttataccattctgatgtatttctatct |
508 |
Q |
| |
|
||||| | |||| || || | ||| ||| ||| ||| || ||||| | ||||||||||||| |||||||| | | |||||||||| |
|
|
| T |
22436371 |
gtaactaaatcctagaatttttcttattatggaatattcatttgactgatctgcatttatattttcactaaacttgtaccattcagtaggatttctatct |
22436470 |
T |
|
| Q |
509 |
ttgcaagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaac |
608 |
Q |
| |
|
||||||||||||| ||||||| ||| |||||||||||| || ||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
22436471 |
ttgcaagataaaagaccaccagtgactacaattgctagaggtaatcctttgcattttttaacaattttggaagatatatcaataagattttgtggacaac |
22436570 |
T |
|
| Q |
609 |
gtccgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttctt |
708 |
Q |
| |
|
||| | |||| ||||||| ||||||||||||||| || ||||||| |||||||| ||||||| ||||||| |||||||||||||||||| |||| |
|
|
| T |
22436571 |
atccactcaagttatggaatgccttcttattgaacaattctaaagatttttcttcagttaaaccttgaagttcatgtacttcaacaaaagaagatctctt |
22436670 |
T |
|
| Q |
709 |
acaagcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaag |
808 |
Q |
| |
|
| ||| ||||| ||||| ||| || |||||||||||||||| |||| |||| ||| ||||||||||||||||||| ||||||| ||||| || |||| |
|
|
| T |
22436671 |
aaaagaatttgcaacattcattttccttgttgtgattaataccttagaaccatttaagttatcaatcatagcaaattcaatatcattccaaatatttaag |
22436770 |
T |
|
| Q |
809 |
ttccatacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttggg |
908 |
Q |
| |
|
|||||||| || ||||| || | || |||||||||| |||||| | || |||||||||||| ||| | ||||| ||||||| || ||||| || | |
|
|
| T |
22436771 |
ttccatacatcgtcaaacacgacaaagtaccttttttgctgcaactgttttatcacttcatcaatcaacggctctccgttcatttcatatatactctgag |
22436870 |
T |
|
| Q |
909 |
ggagatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatc |
1008 |
Q |
| |
|
| ||| | |||||||||| ||||| || | |||| |||||||||| |||| |||| || ||||||||||||||||| |||||||||||||||| || |
|
|
| T |
22436871 |
gaggatctttcccttgttgtttgtaaatctcgagcaaaatgtccctcaacaatttttctttactgtatgattgagacactgtgatccatacatgacagtc |
22436970 |
T |
|
| Q |
1009 |
aaagtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaat |
1086 |
Q |
| |
|
||| ||||| | || ||| | | |||||||| ||||| || ||||| ||||||||||| |||||| |||| ||||| |
|
|
| T |
22436971 |
aaattgttttaagactttgatgttctcaaaaactttcttggccagagtagtttttccttgccctcccattcctacaat |
22437048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 12 - 906
Target Start/End: Original strand, 22367264 - 22368161
Alignment:
| Q |
12 |
gaacctgtgagttttcaatattttccatgaaattatcagatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
111 |
Q |
| |
|
|||| |||||| |||||||| |||||| | ||||||||| || |||||||||||||||||||| ||| ||| || ||| |||| |||||| | |
|
|
| T |
22367264 |
gaacatgtgagctttcaataccttccattagattatcagaacttgatgctattgataggcgtcgaatcattccagttgaaggcaattgtctgtcctcggt |
22367363 |
T |
|
| Q |
112 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaatt |
211 |
Q |
| |
|
|||| |||||||||| ||||| || ||| ||| | |||||||| |||||| |||||||||||||||| ||||| | | |||||||||||||| | || |
|
|
| T |
22367364 |
aatactcttgcaaaagcttaaatcctcatgtttattaaggatcattgcatgcactagatcatgaacacggcaactgtctactcttccatcaatagtgatc |
22367463 |
T |
|
| Q |
212 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcag |
311 |
Q |
| |
|
| ||||| ||||||||| ||||| |||||| ||| |||||| ||| |||||||| ||||||||||| || | || || |||||||| || ||||||| |
|
|
| T |
22367464 |
ccatctactcgcaccaaacttctacggatcaactctattaaatgtccttctgcaacctcttccaatgtcattcccctttcttctttcacaaacccttcag |
22367563 |
T |
|
| Q |
312 |
ccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatg |
411 |
Q |
| |
|
| |||||||| ||| |||||||||||| | |||| | | ||||||||||||||||||| ||||| |||||||||||||| ||| ||| ||||||||| |
|
|
| T |
22367564 |
caatccattgacgagtcaatatatttgaacgaacatttgagtcttcaggatataatccaaagtacaagaaacatgacttgaggttgcaaggcaaatcatg |
22367663 |
T |
|
| Q |
412 |
gtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaact---ctatatttagaatttcactaaacttataccattctgatgtatttctatct |
508 |
Q |
| |
|
||||| || |||| || ||| | ||| ||| ||| ||| || ||||| | |||||||||||||| ||||||| || ||| |||||| |
|
|
| T |
22367664 |
gtaactaagtcctagaattttttttatcatggaatattcctttgactgatctgcatttatattttcactaaacttagaccattcaattggattcctatct |
22367763 |
T |
|
| Q |
509 |
ttgcaagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaac |
608 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22367764 |
ttgcaagctaaaataccaccaatgactacaattgcgagtggtaatccattgcatttttcaacaattttggaagatatatcaataagattttctggacaat |
22367863 |
T |
|
| Q |
609 |
gtccgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttctt |
708 |
Q |
| |
|
|||| | ||||| ||||| | ||||||||||||||| || ||||||| ||||||| ||||||| |||| || |||||||||||||||||||||||| |
|
|
| T |
22367864 |
atccgctcaagtcatggaacgccttcttattgaacaattctaaagatttttcttcacttaaaccttcaagtttatgcacttcaacaaaagaagatttctt |
22367963 |
T |
|
| Q |
709 |
acaagcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaag |
808 |
Q |
| |
|
|||||||| || ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||| |||||||||| || |
|
|
| T |
22367964 |
acaagcatctgcaacatcctcgtttcttgttgtgattaatatcttacaaccatttttgttatcaatcatagaaaattcaatatcattccaaaaatgtgag |
22368063 |
T |
|
| Q |
809 |
ttccatacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttg |
906 |
Q |
| |
|
| |||||| |||||||| |||| ||| ||||||||| | ||||||||||| |||||||||||||| ||| ||| || || ||||||||||| |||||| |
|
|
| T |
22368064 |
tcccatacatcatcaaacactacaacgtacctttttccttgcaagtagtttctcacttcatcaactaataactttccatccatttgatgaagactttg |
22368161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 257; E-Value: 1e-142
Query Start/End: Original strand, 112 - 1098
Target Start/End: Original strand, 22634946 - 22635929
Alignment:
| Q |
112 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaatt |
211 |
Q |
| |
|
||||||||||||||||||||| || | | |||| |||||||||| | |||| |||||||||||||| | ||||||||| ||||||||||||||||| || |
|
|
| T |
22634946 |
aatattcttgcaaaaacttaaatccttaaatttgtcaaggatcatttcatgcactagatcatgaacgcggcaactttttactcttccatcaatactagtt |
22635045 |
T |
|
| Q |
212 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcag |
311 |
Q |
| |
|
||||||||||||||||||| |||| |||||| ||| ||||||||| |||||||| ||||| ||||| || | || || ||||||||||| ||||||| |
|
|
| T |
22635046 |
gaaactacttgcaccaaacttctatggatcaactctactaaatatccttctgcaacctcttcaaatgtccttcccctgtcttctttcacgaacccttcag |
22635145 |
T |
|
| Q |
312 |
ccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatg |
411 |
Q |
| |
|
| |||||||| ||| ||||| | |||| | |||||||| | ||||||||||||||||||||||||| |||||||||||||| | | | | ||||||||| |
|
|
| T |
22635146 |
caatccattggcgagtcaatgtttttgaacgaactatatagtcttcaggatataatccaaaatacaagaaacatgacttgaggtagcatggcaaatcatg |
22635245 |
T |
|
| Q |
412 |
gtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaactctatatttagaatttcactaaacttataccattctgatgtatttctatctttg |
511 |
Q |
| |
|
||||| || |||| || ||| | ||| ||| | ||||||| ||||| | ||||||||||||| |||||||| || ||||||||| || |
|
|
| T |
22635246 |
gtaactaagtcctaaaatttttcttatcatggaatattcctctaactctgcatttatattttcactaaacttcgaccattctattgaatttctatccgtg |
22635345 |
T |
|
| Q |
512 |
caagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgtc |
611 |
Q |
| |
|
| ||||| |||| ||||||||| |||||||||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||| ||| ||| || | |
|
|
| T |
22635346 |
cgagatagaatatcaccaatgactacaattgctagaggtaatcctttgcatttttcgacaattttggaagatatatcaataagatattcaggaaaaatgc |
22635445 |
T |
|
| Q |
612 |
cgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttaca |
711 |
Q |
| |
|
||| ||| | |||| | |||||| ||||| ||||||||||||| ||||| |||| || ||| | || ||||| | ||| ||||||| ||||| |
|
|
| T |
22635446 |
cgtccaagccatggagcgccttctttagaaacaattccaaagattgtttttcagataaacgttccagattatgcactttaccaa---aagatttattaca |
22635542 |
T |
|
| Q |
712 |
agcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttc |
811 |
Q |
| |
|
|||||||| ||||||| | ||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||| |||||||||| | | | |
|
|
| T |
22635543 |
agcatttgcaacatccttttttcttgttgtgattaatatcctacaactatttttgttatcaatcatagcaaattcaatatcagaccaaaaatgtgactcc |
22635642 |
T |
|
| Q |
812 |
catacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttggggga |
911 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||| | || |||| ||| |||||||||||||| ||||||| ||||| ||||||||| | ||| | || |
|
|
| T |
22635643 |
catacatcatcaaacactaaaacatacctttttccttgaaagtggtttctcacttcatcaactaatgactttcgatccatttgatggagactctcaggag |
22635742 |
T |
|
| Q |
912 |
gatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaa |
1011 |
Q |
| |
|
|| | | |||||||||| |||||||| | ||| ||||| | || || | |||| ||||||||| | ||||||| | ||||||||| |||||||||| |
|
|
| T |
22635743 |
gaacttccccttgttgtttgtaaaactcgagcataatgtctcgcaacactttttctgtattgtatggtcgagacaccgtaatccatacacgacaatcaaa |
22635842 |
T |
|
| Q |
1012 |
gtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgt |
1098 |
Q |
| |
|
|| ||| |||| ||| | ||||||||| |||||||| ||||| |||||||||||||||||| |||||| |||| ||||||||| |
|
|
| T |
22635843 |
gtattttacgacctttgggttgtcaaaaactttcttcgctagagtggtttttccttgtcctcccattccaaagatggagacaattgt |
22635929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 471 - 872
Target Start/End: Original strand, 22430972 - 22431373
Alignment:
| Q |
471 |
tttcactaaacttataccattctgatgtatttctatctttgcaagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaac |
570 |
Q |
| |
|
|||||||||||||| ||||||| || ||| ||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
22430972 |
tttcactaaacttagaccattcaattggattcctatctttgcaagctaaaataccaccaatgactacaattgcgagtggtaatccattgcatttttcaac |
22431071 |
T |
|
| Q |
571 |
aatttttgaagatatatcaataagattttctggacaacgtccgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaa |
670 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||| |||| | ||||| ||||| |||||||||||||| || ||||||| |||||| | ||| |
|
|
| T |
22431072 |
aattttggaagatatatctataagattttctggacaatatccgctcaagtcatggaacactttcttattgaacaattctaaagatttttcttcggttaaa |
22431171 |
T |
|
| Q |
671 |
cctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattat |
770 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
22431172 |
cctttaagttcatgcacttcaacaaaagaagatttcttacaagcatctacaccatccttgtttcttgttgtgattaatatcttacaaccatttttgttat |
22431271 |
T |
|
| Q |
771 |
caatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatc |
870 |
Q |
| |
|
||||||||||||||| ||||||| |||||||| | | | |||||| |||||||| |||| ||| ||||||||| | ||||||||||| |||| || ||| |
|
|
| T |
22431272 |
caatcatagcaaattcaatatcataccaaaaatttgactcccatacatcatcaaacactacaacgtacctttttccttgcaagtagtttctcagtttatc |
22431371 |
T |
|
| Q |
871 |
aa |
872 |
Q |
| |
|
|| |
|
|
| T |
22431372 |
aa |
22431373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 12 - 1099
Target Start/End: Original strand, 22353155 - 22354240
Alignment:
| Q |
12 |
gaacctgtgagttttcaatattttccatgaaattatcagatctgattgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgct |
111 |
Q |
| |
|
|||| ||||||||||||||| ||| ||| || |||||||| || |||||||||||||||||| || ||| ||| |||| || ||| | | |||| | |
|
|
| T |
22353155 |
gaacatgtgagttttcaatacttttcattaacttatcagaactagttgctattgataggcgtcaaatcattccagttaatgacagttgtt--tgctcg-t |
22353251 |
T |
|
| Q |
112 |
aatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaatt |
211 |
Q |
| |
|
||||||||||||||||||||| || ||| ||||| |||||||| | |||| |||||||| ||||||| |||||||||| |||||||||||||||| | | |
|
|
| T |
22353252 |
aatattcttgcaaaaacttaaatcctcatattttctaaggatcatttcatgcactagatcgtgaacacgacaactttttactcttccatcaatactgact |
22353351 |
T |
|
| Q |
212 |
gaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcag |
311 |
Q |
| |
|
||| ||||||||||||||| |||| ||| || ||| |||||||||| |||||||| ||||||| ||| || | | | |||||||| || || |||| |
|
|
| T |
22353352 |
gaatctacttgcaccaaacttctatggattaactcttttaaatatccttctgcaacctcttccattgtccttcccccgtattctttcacaaacccctcag |
22353451 |
T |
|
| Q |
312 |
ccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaa-gacaaatcat |
410 |
Q |
| |
|
| |||||||| ||| ||||| ||| || | |||| | |||| ||||||||||||||||||| |||||||||||||| | |||| | |||||||| |
|
|
| T |
22353452 |
caatccattgacgagtcaatgtatctgaataaacttcgtagtcttcgagatataatccaaaatacaagaaacatgacttgaggtagtaaaggcaaatcat |
22353551 |
T |
|
| Q |
411 |
ggtaaccgagacctacaannnnnnnnatcttcaaatcttcttttaactctatatttagaatttcactaaacttataccattctgatgtatttctatcttt |
510 |
Q |
| |
|
|||||| | |||| || || | ||| ||| | ||||||| ||||| | |||||||||||||| ||||||| || |||||||||||| |
|
|
| T |
22353552 |
ggtaactaaatcctaaaatttttcttattatggaatattcctctaactctgcatttatattttcactaaacttagaccattcaattggatttctatcttt |
22353651 |
T |
|
| Q |
511 |
gcaagataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgt |
610 |
Q |
| |
|
|| |||||||||| ||| |||| ||||||||| || || ||||| ||||||||||||| ||||| |||||||||| || |||||||| ||||||| | |
|
|
| T |
22353652 |
gcgagataaaatattacctatgactacaattgcgagaggtaatcctttgcatttttcaataatttcggaagatatataaaaaagattttttggacaaaat |
22353751 |
T |
|
| Q |
611 |
ccgtttaagtcgtggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttac |
710 |
Q |
| |
|
|||| ||||| |||| | |||||| || ||||| ||||||||||||| ||||| |||| || ||| |||| ||||| | | | |||||||||||| |
|
|
| T |
22353752 |
ccgtccaagtcacggaacgccttctttttaaacaaatccaaagattgtttttcagataaacgttccagctcatgcactttaccga---aagatttcttac |
22353848 |
T |
|
| Q |
711 |
aagcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatt-tgatatcatcccaaaaatgtaagt |
809 |
Q |
| |
|
|| ||| || ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| | |||||||||| | | |
|
|
| T |
22353849 |
aatcatctgtaacatccttgtttcttgttgtgattaatatcttacaaccatttttgttatcaatcatagcaaattcaaatatcttgccaaaaatgtgact |
22353948 |
T |
|
| Q |
810 |
tccatacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggg |
909 |
Q |
| |
|
| |||| | |||||| |||| ||| ||||||||| | ||||||| ||| |||||||||||||| |||| || ||||| ||||||||| | ||| || || |
|
|
| T |
22353949 |
cctatacattatcaaacactacaacgtacctttttccttgcaagttgtttctcacttcatcaactaatggctttcgatccatttgatggagactctgagg |
22354048 |
T |
|
| Q |
910 |
gagatttgctcctt-gttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatcc--atacatgacaa |
1006 |
Q |
| |
|
||| | ||||| |||||| ||||| || |||| |||||||||| || | |||||| ||||||| | |||| || |||||| |||||| |||| |
|
|
| T |
22354049 |
aggatct-ttccttcgttgtttgtaaatctccagcaaaatgtccctcaacactttttctatgttgtatggtcgagataccgtgatccatatacataacaa |
22354147 |
T |
|
| Q |
1007 |
tcaaagtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtg |
1099 |
Q |
| |
|
||||||| ||||| | ||| | | ||||||||| || | || ||||| |||||||| |||||||| |||||||||||| ||||| |||| |
|
|
| T |
22354148 |
tcaaagttcttaactaccttttggttgtcaaaaacttttctggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtg |
22354240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 58 - 416
Target Start/End: Original strand, 22430556 - 22430914
Alignment:
| Q |
58 |
tgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaat |
157 |
Q |
| |
|
|||||||||||||||| ||| ||| ||| ||||| | |||| | | |||| | |||| ||| ||||| ||||| || ||| |||||| |||||||| | |
|
|
| T |
22430556 |
tgctattgataggcgttgaatcattccagttaaatacaattgattgttctcggtgatatacttacaaaagcttaaatcctcatattttttaaggatcatt |
22430655 |
T |
|
| Q |
158 |
gcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatc |
257 |
Q |
| |
|
|||| |||||||||||||||| ||||||| || |||||||||||||||| |||||| ||||||||||||||| |||| |||||| ||| ||||||||| |
|
|
| T |
22430656 |
tcatgcactagatcatgaacacgacaacttcttactcttccatcaatacttattgaatctacttgcaccaaacttctatggatcaactctattaaatatc |
22430755 |
T |
|
| Q |
258 |
catctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttc |
357 |
Q |
| |
|
| |||||||| |||| |||||| || | | | |||||||| || |||||||| |||||||| | | | ||| | |||| | ||||||| | ||| |
|
|
| T |
22430756 |
cttctgcaacctctttcaatgtccttcccgttttttctttcacaaacccttcagcaatccattgacaagttaatgtctttgaataaactatatagtcttt |
22430855 |
T |
|
| Q |
358 |
aggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatggtaac |
416 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||| |
|
|
| T |
22430856 |
aggatataatccaaaatacaagaaacatgacttgaggttgcaaggcaaatcatggtaac |
22430914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 625 - 1075
Target Start/End: Original strand, 30989258 - 30989708
Alignment:
| Q |
625 |
gaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaaca |
724 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| ||| || || ||| |||||||| | |||||||||| ||||||| |||| |
|
|
| T |
30989258 |
gaatgccttcttattgaacaactccaaagattgttgttcatttaaaggttgcaactcaagcacttcaatataagaagattttttacaagacaacacaaca |
30989357 |
T |
|
| Q |
725 |
tccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaa |
824 |
Q |
| |
|
|| | ||||||||||||||| |||||||||| || |||||||||||||| | |||||||| ||||||||||||||||||| |||| || ||||||| |
|
|
| T |
30989358 |
tctaggtttcttgttgtgataaatatcttacttccatttttattatcaattacagcaaattcaatatcatcccaaaaatgtacactccaaacatcatcaa |
30989457 |
T |
|
| Q |
825 |
aaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaata-ctttgggggagatttgctcctt |
923 |
Q |
| |
|
| || | |||||||||||| | |||||||||| |||||||||||| ||||||| |||||| ||||||| |||| | || || | ||| | || | | |
|
|
| T |
30989458 |
acacaacgacatacctttttaaccgcaagtagtttctcacttcatcagtcaatgaccctcgatccatttgaaaaatatccttaggag-gatcttcttcgt |
30989556 |
T |
|
| Q |
924 |
gttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgat |
1023 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| ||| ||||| | | | ||||||||||||||| ||||||||||| |||||||||||||| || || |
|
|
| T |
30989557 |
tttgtttgtaaaactttagcaacatgtccctcaacaacccttcaacagtatatgattgagacactatgatccatacacgacaatcaaagtgtccaatgac |
30989656 |
T |
|
| Q |
1024 |
cttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccc |
1075 |
Q |
| |
|
|| | | ||||||||| ||||||| |||||| ||||| ||||| |||||| |
|
|
| T |
30989657 |
attcctgttgtcaaaaactttcttcgtaagagtggttttaccttgccctccc |
30989708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 57 - 387
Target Start/End: Original strand, 22620269 - 22620599
Alignment:
| Q |
57 |
ttgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaa |
156 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||| || ||| || ||||||| |||||||||||||| || ||||| |||||||| |||| |
|
|
| T |
22620269 |
ttgctattgataggcgtcgagtaacttcacttaaagatgaatgacaatcttcactaatatacttgcaaaaacttagatcctcacacttttcaagtatcat |
22620368 |
T |
|
| Q |
157 |
tgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatat |
256 |
Q |
| |
|
| | | |||||||||||| ||||||||||||| | ||||||| || || | |||| |||||||||||||| |||| |||||| |||||||| ||| |
|
|
| T |
22620369 |
catacgtattagatcatgaacgcaacaactttttgtttttccatcgattcttagtgaagatacttgcaccaaacttctatggatcaactctgttaagtat |
22620468 |
T |
|
| Q |
257 |
ccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaacctt |
356 |
Q |
| |
|
|| |||||||| |||||||| || || | || || ||||| || || |||||||| |||||||||||||||||| | |||| | |||| || || ||| |
|
|
| T |
22620469 |
ccttctgcaacttcttccaaagtattccccctttcttcttttacaaacccttcagctatccattgccgaatcaatctctttgaatcaactttataatctt |
22620568 |
T |
|
| Q |
357 |
caggatataatccaaaatacaacaaacatga |
387 |
Q |
| |
|
| |||||||||||||||||||| |||||||| |
|
|
| T |
22620569 |
ctggatataatccaaaatacaataaacatga |
22620599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 80; E-Value: 7e-37
Query Start/End: Original strand, 626 - 1080
Target Start/End: Complemental strand, 21946136 - 21945682
Alignment:
| Q |
626 |
aatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacat |
725 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||| || |||| || ||| ||| ||| ||| ||||||||||| ||||||| ||| ||||| |
|
|
| T |
21946136 |
aatgccttcttattaaacaactccaaagattgttcttgagttaaacattgcagctcaaacatctcagtgaaagaagattttttacaagaattcacaacat |
21946037 |
T |
|
| Q |
726 |
ccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaa |
825 |
Q |
| |
|
| |||| |||||||| || |||||| ||| || |||||| ||||||| ||||||||| | ||||||||||||||||| |||| || |||||||| |
|
|
| T |
21946036 |
tcttgttccttgttgttataaatatcctacttccatttttactatcaattgcagcaaatttaaaatcatcccaaaaatgtacagtccaaacatcatcaaa |
21945937 |
T |
|
| Q |
826 |
aactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttg-ctccttg |
924 |
Q |
| |
|
|| | ||||||||| |||| ||||||||| || |||||||||| |||| ||||||||||||||||| ||| | ||||| |||| |||||| |
|
|
| T |
21945936 |
gacgacaacatacctcttttgctgcaagtaatttctcacttcatttgtcaataactctcgattcatttga-gaagtatcctcgggaggtttgtctccttt |
21945838 |
T |
|
| Q |
925 |
ttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatc |
1024 |
Q |
| |
|
||||| || || || ||||||||||||||| ||||||||| | || |||||||||||||| ||||||||||| |||||||||||||| || || |
|
|
| T |
21945837 |
ttgtttgtgaagttttagcaacatgtccctcaacaatccttcaacatcatatgattgagacacagtgatccatacaagacaatcaaagtgtcaaatgaca |
21945738 |
T |
|
| Q |
1025 |
ttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttcc |
1080 |
Q |
| |
|
| || ||||||||| ||||| || ||||| ||||||||||| |||||| |||| |
|
|
| T |
21945737 |
tccttgctgtcaaaaactttcttggctagagtggtttttccttgccctcccattcc |
21945682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 61 - 395
Target Start/End: Original strand, 22656443 - 22656777
Alignment:
| Q |
61 |
tattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgca |
160 |
Q |
| |
|
||||||||||||||||| || ||||||| |||||| ||| |||| | ||||||| |||||| |||||||| || ||||| ||||||||||||| | |
|
|
| T |
22656443 |
tattgataggcgtcgaataattccacttatagatgaatggccatctgcactaatatgcttgcagaaacttaaatcctcacacttttcaaggatcatcata |
22656542 |
T |
|
| Q |
161 |
tggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccat |
260 |
Q |
| |
|
|| | || |||||| |||||||||||||| | | |||| ||||| |||| ||| |||||| ||||||| || | ||||| |||||||||||||| | |
|
|
| T |
22656543 |
tgtattaaatcatggacacaacaacttttagtttttccgtcaattctaactgaggatacttgtaccaaacatcggcgaatcaactctgttaaatatcctt |
22656642 |
T |
|
| Q |
261 |
ctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttcagg |
360 |
Q |
| |
|
||||||| |||||||| ||||| | || || |||||||| || |||||||| ||||||||||| |||| | | |||| |||| | || |||| || |
|
|
| T |
22656643 |
ctgcaacttcttccaaagttttccccctttcttctttcacaaaaccttcagctatccattgccgtatcactctctttgattcaacttcataatcttctgg |
22656742 |
T |
|
| Q |
361 |
atataatccaaaatacaacaaacatgacttgagat |
395 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||| |
|
|
| T |
22656743 |
atatattccaaaatacaacaaacatgacttaagat |
22656777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 721 - 1080
Target Start/End: Complemental strand, 22115502 - 22115143
Alignment:
| Q |
721 |
aacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtca |
820 |
Q |
| |
|
||||||||||||||||||||| || |||||||||| || |||||| ||||||| | || ||||| ||||||||||||||||||| ||||| || ||| |
|
|
| T |
22115502 |
aacatccatgtttcttgttgttataaatatcttacttccatttttactatcaattacagaaaattcaatatcatcccaaaaatgtacattccaaacatca |
22115403 |
T |
|
| Q |
821 |
tcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctc |
920 |
Q |
| |
|
||||| || | ||| ||||| |||| ||||||||| || |||||||||||| ||| | |||||| |||||||| |||||| || |||| ||| |
|
|
| T |
22115402 |
tcaaacacgacaacgtacctctttttctgcaagtattttctcacttcatcagttaataatcctcgatccatttgataaatactcgaaggtggattgtctc |
22115303 |
T |
|
| Q |
921 |
cttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaac |
1020 |
Q |
| |
|
||| ||||| ||||| || ||||||| ||||||| ||| ||||| | | ||||||||||||||| ||||||||||| |||||||||||||| || |
|
|
| T |
22115302 |
cttcttgtttgtaaatttttggcaacatatccctcaacaacccttcaacttcatatgattgagacactgtgatccatacacgacaatcaaagtgtccaat |
22115203 |
T |
|
| Q |
1021 |
gatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttcc |
1080 |
Q |
| |
|
||| | || ||||||||| ||||| | ||||| ||||||||||| |||||| |||| |
|
|
| T |
22115202 |
gatatccttgctgtcaaaaactttctttgatagagtggtttttccttgccctcccattcc |
22115143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 721 - 1080
Target Start/End: Complemental strand, 22179834 - 22179475
Alignment:
| Q |
721 |
aacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtca |
820 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||| || |||||| ||||||| |||| ||| | ||||||||||||| || ||||| || ||| |
|
|
| T |
22179834 |
aacatccatgttccttgttgttattaatatcttacttccatttttactatcaattgcagcagattcaacatcatcccaaaaaagttcattccaaacatca |
22179735 |
T |
|
| Q |
821 |
tcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttg-ct |
919 |
Q |
| |
|
||||| || | || ||| | |||||||||||| || |||||||||| | ||||||||| |||||||||||| ||||| | ||| |||||| || |
|
|
| T |
22179734 |
tcaaatacgacaatgtacttcgattcctgcaagtaatttctcacttcattagtcaatgactcccgattcatttgagaaataccctcggg-agatttcact |
22179636 |
T |
|
| Q |
920 |
ccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaa |
1019 |
Q |
| |
|
|||| ||||| | ||| ||| |||||||||| |||| ||||||||| ||| ||||||||||||||| | ||||||||| |||||||||||||| || |
|
|
| T |
22179635 |
cctttttgtttgcaaatctttagcaacatgtctctcaacaatccttcagcattatatgattgagacactgtaatccatacacgacaatcaaagtgtccaa |
22179536 |
T |
|
| Q |
1020 |
cgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttcc |
1080 |
Q |
| |
|
||| | || ||||||||| ||||| || ||||||||||||||||| |||||| |||| |
|
|
| T |
22179535 |
tgatatccttgctgtcaaaaactttcttggctagagttgtttttccttgccctcccattcc |
22179475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 625 - 1080
Target Start/End: Complemental strand, 22035030 - 22034575
Alignment:
| Q |
625 |
gaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaaca |
724 |
Q |
| |
|
||||| ||||||||||||||||| ||| |||||||||| || ||| || ||| ||| ||| |||| ||||||||||| ||||||| |||| |
|
|
| T |
22035030 |
gaatgccttcttattgaacaacttcaatgattgttcttgagttaaaggttgcagctcaagcacctcaatgaaagaagattttttacaagacaacacaaca |
22034931 |
T |
|
| Q |
725 |
tccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaa |
824 |
Q |
| |
|
||||||||||||||||| || |||||||||| || |||||| ||||||| | || ||||| ||||||||||||||||||| ||||| || ||||||| |
|
|
| T |
22034930 |
tccatgtttcttgttgttataaatatcttacttccatttttactatcaattacagaaaattcaatatcatcccaaaaatgtacattccaaacatcatcaa |
22034831 |
T |
|
| Q |
825 |
aaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttg |
924 |
Q |
| |
|
| || | || ||||| || | |||||| || |||||||||||| ||||||||| |||||||||||| ||||| | ||| | | |||||| |
|
|
| T |
22034830 |
agacaacaaggtacctcgatttccgcaagtgatttctcacttcatcagtcaatgactcccgattcatttgagaaataccctcgggaggtgtcactccttt |
22034731 |
T |
|
| Q |
925 |
ttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatc |
1024 |
Q |
| |
|
|| || | ||| ||| |||||||||| |||| ||||||||| ||| ||||||||||||||| | ||||||||| || ||||||||||| | ||| |
|
|
| T |
22034730 |
ttctttgcaaacctttagcaacatgtctctcaacaatccttcagaattatatgattgagacactgtaatccatacacgataatcaaagtgtcccatgata |
22034631 |
T |
|
| Q |
1025 |
ttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttcc |
1080 |
Q |
| |
|
| || ||||||||| ||||| || ||||||||||||||||| |||||| |||| |
|
|
| T |
22034630 |
tccttgctgtcaaaaactttcttggctagagttgtttttccttgccctcccattcc |
22034575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 118 - 416
Target Start/End: Original strand, 30988739 - 30989037
Alignment:
| Q |
118 |
cttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaact |
217 |
Q |
| |
|
|||||||||| |||| || ||| ||||||||||||||| | | | |||||||||||||| ||||| ||| ||| | ||||||| |||| ||| | |
|
|
| T |
30988739 |
cttgcaaaaatttaaatcctcaaatttttcaaggatcatatcgcgtattagatcatgaacacgacaacctttagctttaccatcaactctaaccgaagat |
30988838 |
T |
|
| Q |
218 |
acttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatcc |
317 |
Q |
| |
|
||||||||||| | |||| |||||| |||||||||||||| |||||||| |||||||| || || | || || || |||||||| |||||||| | || |
|
|
| T |
30988839 |
acttgcaccaagcttctatggatcaactctgttaaatatccttctgcaacgtcttccaaagtcttccctctttcctccttcacgaacccttcagctaccc |
30988938 |
T |
|
| Q |
318 |
attgccgaatcaatatatttgtaggaactatacaaccttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcatggtaac |
416 |
Q |
| |
|
|||| ||||||||| | |||| |||| | || |||| ||||||| ||||||||||||||| |||||||||||| ||||| |||||||| ||||| |
|
|
| T |
30988939 |
attgtcgaatcaatctctttgatttaacttcataatcttctggatatattccaaaatacaacaagcatgacttgagagagtaaggcaaatcatcgtaac |
30989037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 111 - 279
Target Start/End: Original strand, 37930298 - 37930467
Alignment:
| Q |
111 |
taatattcttgcaaaaacttaattcttcacatttttc-aaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaa |
209 |
Q |
| |
|
||||||||| |||||||||||| || | |||| || |||||||| | |||| |||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
37930298 |
taatattctcgcaaaaacttaaatccataaatttgtcaaaggatcatttcatgcactagatcatgaacacgacaactttttactcttccatcaataccgg |
37930397 |
T |
|
| Q |
210 |
ttgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgt |
279 |
Q |
| |
|
||||||||||||||||||||| ||||| ||| || ||| |||||||||| || ||||| | ||||||||| |
|
|
| T |
37930398 |
ttgaaactacttgcaccaaacttctacagattaactcttttaaatatccttccgcaaccttttccaatgt |
37930467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 721 - 1080
Target Start/End: Original strand, 18967036 - 18967393
Alignment:
| Q |
721 |
aacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtca |
820 |
Q |
| |
|
|||||||| ||| |||||||| || ||||| |||| || |||||||||||||| | | |||||| |||||||||||||||||||| |||| || ||| |
|
|
| T |
18967036 |
aacatccaggttccttgttgttatcaatatgttacttccttttttattatcaattacaacaaattcaatatcatcccaaaaatgtaaactccaaacatca |
18967135 |
T |
|
| Q |
821 |
tcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctc |
920 |
Q |
| |
|
||||| || | ||||||||| || ||| | |||||||| || |||||||| |||||||||||||| |||||||| |||||| || ||| ||| || |
|
|
| T |
18967136 |
tcaaacacaacaacatacctcttatcccgtaagtagtttcttacttcatctgtcaatgactctcgatccatttgataaatactctgagggggatcctttc |
18967235 |
T |
|
| Q |
921 |
cttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaac |
1020 |
Q |
| |
|
||| ||||| ||| |||| ||||||||| || | ||| ||||||| || ||||||||||||| |||||||||| | |||||| ||||||| || |
|
|
| T |
18967236 |
ctttttgtttgtatcactttatcaacatgtcgcttaacaacccttctacatcatatgattgagaca--ctgatccatataagacaattaaagtgtccaat |
18967333 |
T |
|
| Q |
1021 |
gatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttcc |
1080 |
Q |
| |
|
|| | || | |||| |||| |||| || ||||||||||||||||| |||||| |||| |
|
|
| T |
18967334 |
gacatccttgttgtcagaaactctctttgctagagttgtttttccttgccctcccattcc |
18967393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 625 - 1080
Target Start/End: Complemental strand, 21930934 - 21930479
Alignment:
| Q |
625 |
gaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaaca |
724 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| | || ||| || || ||| || ||||| ||||||||||| ||||||| |||| |
|
|
| T |
21930934 |
gaatgccttcttattgaacaactccaaagattgttcatgagttaaaggttgcaactcaagcatttcaatgaaagaagattttttacaagacaccacaaca |
21930835 |
T |
|
| Q |
725 |
tccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaa |
824 |
Q |
| |
|
|||||||| |||||||| || |||||||||| || |||||| ||||||| |||||||| ||||||||||||||||||| ||||| || ||||||| |
|
|
| T |
21930834 |
tccatgttccttgttgttataaatatcttacttccatttttactatcaattgcagcaaattcaatatcatcccaaaaatgtacattccaaacatcatcaa |
21930735 |
T |
|
| Q |
825 |
aaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttg |
924 |
Q |
| |
|
| || | ||||||||| |||| ||||||| | || ||||||||| || |||||| |||||| |||||||| || | || | |||| ||||| |
|
|
| T |
21930734 |
acacgacaacatacctctttttctgcaagcattttctcacttcagcagtcaatgatcctcgatccatttgataaaagttctgagtaggattgtctcctat |
21930635 |
T |
|
| Q |
925 |
ttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatc |
1024 |
Q |
| |
|
||||| ||||| || ||||||||||||||| ||| ||||| | || ||||||||||||||| |||||||||| | ||| ||| ||| || ||| |
|
|
| T |
21930634 |
ttgtttgtaaatttttagcaacatgtccctcaacaacccttcaacatcatatgattgagacactgtgatccatactcggaaatgaaaatgtccaatgata |
21930535 |
T |
|
| Q |
1025 |
ttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttcc |
1080 |
Q |
| |
|
| || ||||||||| ||||| || ||||||||||||||||| |||||| |||| |
|
|
| T |
21930534 |
tccttgctgtcaaaaactttcttggctagagttgtttttccttgccctcccattcc |
21930479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 625 - 1080
Target Start/End: Complemental strand, 21937666 - 21937211
Alignment:
| Q |
625 |
gaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaaca |
724 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| | || |||| || || ||| ||||||| ||||||||||| ||||||| |||| |
|
|
| T |
21937666 |
gaatgccttcttattgaacaactccaaagattgttcatgagttaaacattgcaactcaagaacttcaatgaaagaagattttttacaagacaccacaaca |
21937567 |
T |
|
| Q |
725 |
tccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaa |
824 |
Q |
| |
|
|| || | |||||||| || |||||| ||| || |||||| ||||||| |||||||| |||||||||||||||||||| |||| || ||||||| |
|
|
| T |
21937566 |
tcaattatccttgttgttataaatatcctacttccatttttactatcaattccagcaaattcgatatcatcccaaaaatgtagactccaaacatcatcaa |
21937467 |
T |
|
| Q |
825 |
aaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttg |
924 |
Q |
| |
|
| || ||||| ||||| ||| |||||||||| || | |||||| | ||||||| |||||| ||||||| ||||| || ||| |||||| |
|
|
| T |
21937466 |
acacgataacgtacctctttcttcgcaagtagtttctaatttcatccatcaatgaccctcgatccatttgaaaaatacccataggaggatcctctccttt |
21937367 |
T |
|
| Q |
925 |
ttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatc |
1024 |
Q |
| |
|
||||| |||||||||| ||||||||||| ||| ||| ||||| | || |||| |||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
21937366 |
ttgtttgtaaaacttgagcaacatgtccttcaacaacccttcaacatcatatgcttgagacactgtgatccatacacgacaatcaaagtgtccaacgaca |
21937267 |
T |
|
| Q |
1025 |
ttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttcc |
1080 |
Q |
| |
|
| || ||||||| | ||||| || ||||| ||||||||||| |||||| |||| |
|
|
| T |
21937266 |
tccttgctgtcaaaagctttcttagctagagtggtttttccttgccctcccattcc |
21937211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 514 - 863
Target Start/End: Original strand, 22620753 - 22621105
Alignment:
| Q |
514 |
agataaaataccaccaatgagtacaattgctagtggcaatccattgcatttttcaacaatttttgaagatatatcaataagattttctggacaacgtccg |
613 |
Q |
| |
|
|||||||| |||||||| | ||||||||||||||| || || ||||||||| | |||||| |||||||||||||| |||| || |||||||| ||| |
|
|
| T |
22620753 |
agataaaagaccaccaacggctacaattgctagtggtaaacccttgcattttctagcaatttcggaagatatatcaattagatcttttggacaacttcca |
22620852 |
T |
|
| Q |
614 |
tttaagtcgt---ggaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttac |
710 |
Q |
| |
|
| ||||| | ||| |||||||||||||||||| ||||||||||| |||| ||| || ||||||| ||| |||| |||||||||||| |||| |
|
|
| T |
22620853 |
tcaaagtcaaatcgaaataccttcttattgaacaactcaaaagattgttcctcagttaaaggttgtagttcatgcacctcaataaaagaagattttttac |
22620952 |
T |
|
| Q |
711 |
aagcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagtt |
810 |
Q |
| |
|
|| | | | ||||||||| |||||||||| || |||||||||| || |||||||||||||||| | || | || |||| |||||||| || | | |
|
|
| T |
22620953 |
aataaatagcaacatccatacttcttgttgtaatcaatatcttactcccatttttattatcaatcacaacatgctctatttcattccaaaaatctatggt |
22621052 |
T |
|
| Q |
811 |
ccatacgtcatcaaaaactataacataccttttttcctgcaagtagttcctca |
863 |
Q |
| |
|
|||||| |||||||| || | ||||||||| |||| ||||||| ||| |||| |
|
|
| T |
22621053 |
ccatacatcatcaaatacaaaaacatacctcttttgttgcaagtggtttctca |
22621105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 934 - 1191
Target Start/End: Original strand, 22431414 - 22431670
Alignment:
| Q |
934 |
aaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttatcg |
1033 |
Q |
| |
|
||||||||||||||| | | || |||| |||||||| |||| |||||||||| ||||||||| | |||||||||||||||||| || | |||| | | |
|
|
| T |
22431414 |
aaacttgtgcaacattttctgcaacaatttttctatatcatatggttgagacactgtgatccataaacgacaatcaaagtgtttaaggaccctgttgttg |
22431513 |
T |
|
| Q |
1034 |
tcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctctctcctctaccaaccaatcaatta |
1133 |
Q |
| |
|
|||||||| ||||| | ||||| |||||||| |||||||| |||| ||||||| ||| | |||| || ||||| | | | ||||| ||||||||| | |
|
|
| T |
22431514 |
tcaaaaactttcttggttagagtggtttttcccagtcctcccattcc-acaatggagaccactgtgagctcttcttttccatttaccagccaatcaatca |
22431612 |
T |
|
| Q |
1134 |
gtatgtttcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagc |
1191 |
Q |
| |
|
||||| |||||| ||||||| || ||||||||| ||||||| ||| ||||| |||| |
|
|
| T |
22431613 |
atatgtctcttggctcttcaaatcccacaacatcagcttcatccatataaaatggagc |
22431670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 934 - 1015
Target Start/End: Original strand, 22615521 - 22615602
Alignment:
| Q |
934 |
aaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgt |
1015 |
Q |
| |
|
||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
22615521 |
aaacttgcgcaacatgtccctcaacaacccttctatactgtatgattgagacactgtgatccatacacgacaatcaaagtgt |
22615602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 626 - 858
Target Start/End: Original strand, 22615222 - 22615454
Alignment:
| Q |
626 |
aatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacat |
725 |
Q |
| |
|
|||| ||||||||| |||||||||| |||||||||||||| ||| || || |||| ||||| || || |||||| ||||||||| | || ||||| |
|
|
| T |
22615222 |
aatgccttcttattaaacaactccagagattgttcttcagttaaaggttgcaactcatgcactttgactaacgaagatctcttacaagaaagtgcaacat |
22615321 |
T |
|
| Q |
726 |
ccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaa |
825 |
Q |
| |
|
| || || |||||||| || |||||||||| || |||||||||||||| | |||| ||| || |||| ||||||||| | ||||||||| |||||||| |
|
|
| T |
22615322 |
ctatattccttgttgttataaatatcttacttccatttttattatcaattacagcagattcaatctcattccaaaaatgcatgttccatacatcatcaaa |
22615421 |
T |
|
| Q |
826 |
aactataacataccttttttcctgcaagtagtt |
858 |
Q |
| |
|
|| | ||| ||||| |||| |||||||||||| |
|
|
| T |
22615422 |
cacaacaacgtacctcttttgctgcaagtagtt |
22615454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 626 - 776
Target Start/End: Original strand, 22648138 - 22648288
Alignment:
| Q |
626 |
aatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacat |
725 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| | | ||| || || |||||||||||||| |||||||||||||||||| | | ||||| |
|
|
| T |
22648138 |
aatgtcttcttgttgaacaactcaaaagattgttcatttgttaaaggttgcaattcatacacttcaatgaaagaagatttcttacaatatatggcaacat |
22648237 |
T |
|
| Q |
726 |
ccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatca |
776 |
Q |
| |
|
|||| ||||||||||| || |||||||||| || |||||||||||||||| |
|
|
| T |
22648238 |
ccatatttcttgttgtaataaatatcttactcccatttttattatcaatca |
22648288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 631 - 1080
Target Start/End: Original strand, 22657025 - 22657474
Alignment:
| Q |
631 |
cttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacatccatg |
730 |
Q |
| |
|
||||||||| |||||||| |||||||||||| | | ||| | ||||||| |||||||| ||||||||||||||||||| | ||||||||| |
|
|
| T |
22657025 |
cttcttattaaacaactcaaaagattgttctactgttaaaggatgtagttcatgcacttcaataaaagaagatttcttacaatacaccgcaacatccata |
22657124 |
T |
|
| Q |
731 |
tttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaaaacta |
830 |
Q |
| |
|
||||||||||| || |||||||||| || ||||||| |||| | |||| ||| || |||||||||||| | ||||||||| |||||||| || | |
|
|
| T |
22657125 |
tttcttgttgtaataaatatcttactcccatttttatgatcaccaacagcatattcaatctcatcccaaaaacttttgttccatacatcatcaaacacaa |
22657224 |
T |
|
| Q |
831 |
taacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttgttgttc |
930 |
Q |
| |
|
||||||||| |||| ||||||||| || |||| ||| || ||||| |||||| ||||| | ||| ||| || |||| |||||| ||||| |
|
|
| T |
22657225 |
aaacatacctctttttctgcaagtattttctcagctcagaaatcaatgcgcctcgatccatttcagtgatatcttgaggaggattgtctcctttttgttt |
22657324 |
T |
|
| Q |
931 |
gtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatcttgtta |
1030 |
Q |
| |
|
||||| || | ||||||| |||| ||| ||||||||||||| ||||| |||||| ||||||| ||| |||| ||||||||| ||| | || || |
|
|
| T |
22657325 |
gtaaagctccttcaacatgcgtctcaacaacacttctatattgtaagattgtgacactgtgatccaaacacgacattcaaagtgtccaacaacctctttg |
22657424 |
T |
|
| Q |
1031 |
tcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttcc |
1080 |
Q |
| |
|
||||||||| || || |||||||| ||||||||||| |||||| |||| |
|
|
| T |
22657425 |
ctgtcaaaaacttttttagcaagagtagtttttccttgccctcccattcc |
22657474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 860 - 1080
Target Start/End: Complemental strand, 22028278 - 22028058
Alignment:
| Q |
860 |
ctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagca |
959 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||| ||||| | ||| || | |||||| ||||| | ||| ||| |||||||||| |||| || |
|
|
| T |
22028278 |
ctcacttcatcagtcaatgactcccgattcatttgagaaataccctcgggaagtgtcactcctttttgtttgcaaacctttagcaacatgtctctcaaca |
22028179 |
T |
|
| Q |
960 |
atccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgt |
1059 |
Q |
| |
|
||||||| ||| ||||||||||||||| | ||||||||| |||||||||||||| | ||| | || ||||||||| ||||| || |||||||| |
|
|
| T |
22028178 |
atccttcagaattatatgattgagacactgtaatccatacacgacaatcaaagtgtcccatgatatccttgctgtcaaaaactttcttggctagagttgt |
22028079 |
T |
|
| Q |
1060 |
ttttccttgtcctccctttcc |
1080 |
Q |
| |
|
||||||||| |||||| |||| |
|
|
| T |
22028078 |
ttttccttgccctcccattcc |
22028058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 947 - 1099
Target Start/End: Original strand, 22368187 - 22368339
Alignment:
| Q |
947 |
atgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttatcgtcaaaaaccttct |
1046 |
Q |
| |
|
|||||| |||||||| |||| |||| |||| | |||| || ||||||||| | ||||||||||||||||||||| ||| | | ||||||||| |||| |
|
|
| T |
22368187 |
atgtccttcagcaatttttctttattatatggtcgagaaaccgtgatccataaacgacaatcaaagtgtttaacgaccttttggttgtcaaaaactttct |
22368286 |
T |
|
| Q |
1047 |
tcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtg |
1099 |
Q |
| |
|
| || ||||| |||||||| |||||||| |||||||||||| ||||| |||| |
|
|
| T |
22368287 |
tggctagagtggtttttcccagtcctcccattccaacaatggagacaactgtg |
22368339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 761 - 1080
Target Start/End: Complemental strand, 22053110 - 22052791
Alignment:
| Q |
761 |
tttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaaaactataacataccttttttcctgcaagtagttcc |
860 |
Q |
| |
|
|||||| ||||||| |||||||| ||||||| |||||||||| ||||| || |||||||| || | || |||| |||| ||||| ||| || | |
|
|
| T |
22053110 |
tttttactatcaattgcagcaaattcaatatcatgccaaaaatgttcattccaaacatcatcaaatacaacaatgaacctctttttctgcaggtaatttc |
22053011 |
T |
|
| Q |
861 |
tcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaa |
960 |
Q |
| |
|
||||||||||| ||||| |||||| |||||||| |||||| || || |||| |||||| ||||| ||||| || ||||||| ||||||| ||| |
|
|
| T |
22053010 |
tcacttcatcagtcaatgttcctcgatccatttgataaatactctgatggggattgtctcctttttgtttgtaaagttttagcaacatttccctcaacaa |
22052911 |
T |
|
| Q |
961 |
tccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtt |
1060 |
Q |
| |
|
||||| | || ||||||||||||||| | |||||||| |||||||||| ||| || ||| | || ||||||||| ||||| || ||||||||| |
|
|
| T |
22052910 |
cccttcaacatcatatgattgagacactgtaatccatacccgacaatcaaaatgtccaatgatatccttgctgtcaaaaactttcttggctagagttgtt |
22052811 |
T |
|
| Q |
1061 |
tttccttgtcctccctttcc |
1080 |
Q |
| |
|
|||||||| |||||| |||| |
|
|
| T |
22052810 |
tttccttgccctcccattcc |
22052791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 166 - 410
Target Start/End: Complemental strand, 21946608 - 21946364
Alignment:
| Q |
166 |
tagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgca |
265 |
Q |
| |
|
|||||||||||||| ||||| ||| ||| | |||||||| |||| |||| |||||| |||| | |||| |||||| |||||||||||||| ||||| |
|
|
| T |
21946608 |
tagatcatgaacacgacaacctttagctttaccatcaattctaagtgaagatacttgaaccaggcttctatggatcaactctgttaaatatccttctgcc |
21946509 |
T |
|
| Q |
266 |
acatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatata |
365 |
Q |
| |
|
|| |||||||| || || | || || || ||||| || |||||||| |||||||| ||||||| | | || | |||| | || |||| ||||||| |
|
|
| T |
21946508 |
acttcttccaaagtcttccctctttcctccttcacaaacccttcagctatccattgtcgaatcactctcttcgatttaacttcataatcttctggatata |
21946409 |
T |
|
| Q |
366 |
atccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
||||||||| ||||| ||||||||||||| | ||| |||||||| |
|
|
| T |
21946408 |
ctccaaaataaaacaagcatgacttgagatagcaaggcaaatcat |
21946364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 860 - 1080
Target Start/End: Complemental strand, 22187266 - 22187046
Alignment:
| Q |
860 |
ctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagca |
959 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||| ||||| | ||| | | |||||| ||||| | ||| ||| |||||||||| |||| || |
|
|
| T |
22187266 |
ctcacttcatcagtcaatgactcccgattcatttgagaaataccctcgggaggtgtctctcctttttgtttgcaaacctttagcaacatgtctctcaaca |
22187167 |
T |
|
| Q |
960 |
atccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgt |
1059 |
Q |
| |
|
||||||| ||| ||||||||||||||| | ||||||||| |||||||||||||| | ||| | || ||||||||| ||||| || |||||||| |
|
|
| T |
22187166 |
atccttcagaattatatgattgagacactgtaatccatacacgacaatcaaagtgtcccatgatatccttgctgtcaaaaactttcttggctagagttgt |
22187067 |
T |
|
| Q |
1060 |
ttttccttgtcctccctttcc |
1080 |
Q |
| |
|
||||||||| |||||| |||| |
|
|
| T |
22187066 |
ttttccttgccctcccattcc |
22187046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 88 - 276
Target Start/End: Original strand, 22647588 - 22647776
Alignment:
| Q |
88 |
taaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactt |
187 |
Q |
| |
|
||||||||| | ||||| || ||||||| |||||| ||||||| || |||| ||||||||||||| ||| | |||||||||||||| |||||| |
|
|
| T |
22647588 |
taaagatgaaagatcatcttcactaatatgcttgcagaaacttatatcctcactcttttcaaggatcatcatatgtatcagatcatgaacacagcaactt |
22647687 |
T |
|
| Q |
188 |
tttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaa |
276 |
Q |
| |
|
|| | | |||||||||| |||| |||| |||||| ||||||| |||| |||||| || |||||||||| |||||||| |||||||| |
|
|
| T |
22647688 |
ttagtttttccatcaattctaactgaagatacttgaaccaaacttctatggatcaactcagttaaatatcgttctgcaacttcttccaa |
22647776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 410
Target Start/End: Complemental strand, 21938239 - 21937893
Alignment:
| Q |
64 |
tgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatgg |
163 |
Q |
| |
|
||||||||| ||||| || |||||||| ||| ||| |||| || || |||| |||||||||| | || || ||| |||||||||||||| || | |
|
|
| T |
21938239 |
tgataggcgccgaactattccacttaaggatctttgtccatcatcactgatatgcttgcaaaaattaaaatcctcatctttttcaaggatcatatcacgt |
21938140 |
T |
|
| Q |
164 |
actagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctg |
263 |
Q |
| |
|
| |||||||||||||| ||||| ||| ||| | |||||||| |||| ||| |||||| |||| | |||| ||||| ||||||| |||||| |||| |
|
|
| T |
21938139 |
attagatcatgaacacgacaacctttagctttgccatcaattctaagtgaggatacttgaaccaggcttctatgtatcaactctgttagatatccctctg |
21938040 |
T |
|
| Q |
264 |
caacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggata |
363 |
Q |
| |
|
| || ||||||| || ||| | | || || ||||| ||||||||||| |||||||| ||||| | | | |||| || | | || |||| ||||| |
|
|
| T |
21938039 |
ccacttcttccatagtctttcccttttcctccttcacaaatccttcagctatccattgtcgaatgactctctttggtctaatttcaaaatcttctggata |
21937940 |
T |
|
| Q |
364 |
taatccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
|| ||||||||||||||| ||||||||||||| ||||| |||||||| |
|
|
| T |
21937939 |
tactccaaaatacaacaagcatgacttgagatagtaaggcaaatcat |
21937893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 1011 - 1205
Target Start/End: Original strand, 22632204 - 22632398
Alignment:
| Q |
1011 |
agtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttccttgtcctccctttccaacaatggtgacaattgtgtgcacttctct |
1110 |
Q |
| |
|
|||||||||||||||| | ||||||||| ||||| || ||||| ||||| || |||||||| |||||| ||||| ||||| |||| | || |||| |
|
|
| T |
22632204 |
agtgtttaacgatctttcggttgtcaaaaactttcttggctagagtggttttccccagtcctcccattccaataatggagacaactgtgcgatctgctct |
22632303 |
T |
|
| Q |
1111 |
ctcctctaccaaccaatcaattagtatgtttcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagcctttcgaaggttct |
1205 |
Q |
| |
|
||||||||| ||||| ||||||| | | | |||| ||||||| || ||||||||| ||||||| ||| ||||| |||| | ||||||||||| |
|
|
| T |
22632304 |
tccctctaccagccaattaattagtttctctattggctcttcaaatcccacaacatcagcttcatccatataaaatggagcgtctcgaaggttct |
22632398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 410
Target Start/End: Complemental strand, 22180506 - 22180157
Alignment:
| Q |
61 |
tattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgca |
160 |
Q |
| |
|
|||||||||||| ||||| || |||||||| ||| || |||| || ||||||| |||||||||| | || || ||| ||||| |||||||| || |
|
|
| T |
22180506 |
tattgataggcgccgaactattccacttaaggatatctgtccatcatcactaatatgcttgcaaaaattaaaatcctcatttttttgaaggatcatatca |
22180407 |
T |
|
| Q |
161 |
tggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccat |
260 |
Q |
| |
|
| | |||||||||||||| ||||| ||| ||| | |||||||| |||| ||| |||||| |||| | |||| |||||| ||||||| |||||| | |
|
|
| T |
22180406 |
cgtattagatcatgaacacgacaacctttagctttgccatcaattctaagcgaagatacttgaaccaggcttctatggatcaactctgttagatatccct |
22180307 |
T |
|
| Q |
261 |
ctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttcagg |
360 |
Q |
| |
|
|||| || ||||||| ||||||| | | || || ||||| || |||||||| ||||||| ||| | | | | || | |||| | || | || || |
|
|
| T |
22180306 |
ctgccacttcttccattgtttttcccttttcctccttcacaaacccttcagctatccattttcgagttactctcttcgatttaacttcataatcctctgg |
22180207 |
T |
|
| Q |
361 |
atataatccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
22180206 |
atatactccaaaatacaacaaacatgacttgagatagtaaggcaaatcat |
22180157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 410
Target Start/End: Complemental strand, 22116067 - 22115825
Alignment:
| Q |
168 |
gatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaac |
267 |
Q |
| |
|
|||||||||||| ||||| ||| ||| | |||||||| |||| ||| |||||| |||| || |||| |||||| ||||||| |||||| ||||| || |
|
|
| T |
22116067 |
gatcatgaacacgacaacctttagctttgccatcaattctaagcgaagatacttgaaccatacttctatggatcaactctgttatatatccctctgccac |
22115968 |
T |
|
| Q |
268 |
atcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatataat |
367 |
Q |
| |
|
|| |||| || ||| | || || || ||||| || |||||||| |||||||| ||| | | | | |||| |||| | || |||| || |||| | |
|
|
| T |
22115967 |
ttcatccatagtctttcccctttcctccttcacaaacccttcagctatccattgtcgagtgattctctttgatttaacttcaaaatcttctgggtatact |
22115868 |
T |
|
| Q |
368 |
ccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
22115867 |
ccaaaatacaacaaacatgacttgagatagtaaggcaaatcat |
22115825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 410
Target Start/End: Complemental strand, 22053690 - 22053446
Alignment:
| Q |
166 |
tagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgca |
265 |
Q |
| |
|
|||||||||||||| ||| | ||| ||| | |||||||| |||| |||| |||||| |||| | |||| |||||| |||| ||||||||| ||||| |
|
|
| T |
22053690 |
tagatcatgaacacgacatcctttagctttgccatcaattctaagtgaagatacttgaaccaggcttctatggatcaactctgataaatatccttctgcc |
22053591 |
T |
|
| Q |
266 |
acatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaatatatttgtaggaactatacaaccttcaggatata |
365 |
Q |
| |
|
|| |||||||| || || | | || || ||||| || ||||| || |||||||| ||||||| | |||| | |||| | || |||| ||||||| |
|
|
| T |
22053590 |
acttcttccaaagtcttccccttttcctccttcacaaacccttctgctatccattgtcgaatcactcgctttgaattaacttcataatcttctggatata |
22053491 |
T |
|
| Q |
366 |
atccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
||||||||||||||| ||||||| ||||| ||||| |||||||| |
|
|
| T |
22053490 |
ctccaaaatacaacaagcatgactcgagatagtaaggcaaatcat |
22053446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 625 - 702
Target Start/End: Complemental strand, 22187501 - 22187424
Alignment:
| Q |
625 |
gaatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaaga |
702 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| || ||| || |||||||| ||| |||| ||||||||| |
|
|
| T |
22187501 |
gaatgccttcttattgaacaactccaaagattgttctagagataaaggttgcagttcatgcacctcaataaaagaaga |
22187424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 22028796 - 22028740
Alignment:
| Q |
354 |
cttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
|||| ||||||| ||||||||||||||| |||| |||||||| ||||| |||||||| |
|
|
| T |
22028796 |
cttctggatatactccaaaatacaacaagcatggcttgagatagtaaggcaaatcat |
22028740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 22035313 - 22035257
Alignment:
| Q |
354 |
cttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
|||| ||||||| ||||||||||||||| |||| |||||||| ||||| |||||||| |
|
|
| T |
22035313 |
cttctggatatactccaaaatacaacaagcatggcttgagatagtaaggcaaatcat |
22035257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 22105504 - 22105448
Alignment:
| Q |
354 |
cttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
|||| ||||||| |||||| |||||||| ||||||||||||| ||||| |||||||| |
|
|
| T |
22105504 |
cttctggatatactccaaagtacaacaagcatgacttgagatagtaaggcaaatcat |
22105448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 22187784 - 22187728
Alignment:
| Q |
354 |
cttcaggatataatccaaaatacaacaaacatgacttgagattgtaagacaaatcat |
410 |
Q |
| |
|
|||| ||||||| ||||||||||||||| |||| |||||||| ||||| |||||||| |
|
|
| T |
22187784 |
cttctggatatactccaaaatacaacaagcatggcttgagatagtaaggcaaatcat |
22187728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 21931405 - 21931295
Alignment:
| Q |
166 |
tagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgca |
265 |
Q |
| |
|
|||||||||||||| ||||| ||| ||| | |||||||| |||| |||| |||||| || | | |||| |||||| |||||||||||||| ||||| |
|
|
| T |
21931405 |
tagatcatgaacacgacaacctttagctttgccatcaattctaagtgaagatacttgaacgaggcttctatggatcaactctgttaaatatccttctgcc |
21931306 |
T |
|
| Q |
266 |
acatcttccaa |
276 |
Q |
| |
|
|| |||||||| |
|
|
| T |
21931305 |
acttcttccaa |
21931295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 632 - 702
Target Start/End: Complemental strand, 22028506 - 22028436
Alignment:
| Q |
632 |
ttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaaga |
702 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||| || |||||||| ||| |||| ||||||||| |
|
|
| T |
22028506 |
ttcttattgaacaactccaaagattgttctagagataaaggttgcagttcatgcacctcaataaaagaaga |
22028436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 255
Target Start/End: Original strand, 22614708 - 22614842
Alignment:
| Q |
121 |
gcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactact |
220 |
Q |
| |
|
|||||||||||| || | | ||||||||| ||||| || | | |||||||||||||| ||||||||| || ||||||||||| |||| ||| | | |
|
|
| T |
22614708 |
gcaaaaacttaaatccttaaatttttcaaagatcatcacacgtaatagatcatgaacacgacaacttttaacttttccatcaatattaatcgaagagatt |
22614807 |
T |
|
| Q |
221 |
tgcaccaaacctctactgatcaaatctgttaaata |
255 |
Q |
| |
|
|||||||||| |||| | ||||| |||| |||||| |
|
|
| T |
22614808 |
tgcaccaaacttctattaatcaactctgataaata |
22614842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 331
Target Start/End: Original strand, 22628096 - 22628182
Alignment:
| Q |
245 |
tctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatcaat |
331 |
Q |
| |
|
|||||||||||||| |||| || ||||| || |||||| | || || |||||||| ||||||||||| ||| |||| ||||||||| |
|
|
| T |
22628096 |
tctgttaaatatccttctgtgacttcttcgaaagtttttcccctttcttctttcacaaatccttcagctatcaattgtcgaatcaat |
22628182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 918 - 1015
Target Start/End: Original strand, 22648404 - 22648501
Alignment:
| Q |
918 |
ctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgt |
1015 |
Q |
| |
|
|||||| ||||| ||||| || | ||||||| | |||||||| |||||| ||| ||||||||| ||||| ||||||||||| || | ||||||||| |
|
|
| T |
22648404 |
ctcctttttgtttgtaaagctcattcaacatgcctctcagcaacccttctgtatagtatgattgcaacactttgatccatacacgaaattcaaagtgt |
22648501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 60; Significance: 6e-25; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 802 - 1065
Target Start/End: Original strand, 29610697 - 29610961
Alignment:
| Q |
802 |
atgtaagttccatacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgac---tctcgattcatttgatga |
898 |
Q |
| |
|
||||||||||||||| || ||||| |||| || |||||||| ||||||||||| || ||||||||||| || || ||| ||||| | ||||||| | |
|
|
| T |
29610697 |
atgtaagttccatacatcgtcaaacactacaaggtaccttttctcctgcaagtaatttctcacttcatcgactaacgacgactctcgctccatttgagaa |
29610796 |
T |
|
| Q |
899 |
atactttgggggagatttgctccttgttgttcgtaaaa-cttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccat |
997 |
Q |
| |
|
|||||||| || ||| |||| | ||||| |||||| ||| | ||||||| |||| |||||||||||||||||||||||||| || ||| |||||||| |
|
|
| T |
29610797 |
atactttgaggaggatcatctcccttttgtttgtaaaaacttctccaacatgccccttagcaatccttctatattgtatgattgtgatactgtgatccat |
29610896 |
T |
|
| Q |
998 |
acatgacaatcaaagtgtttaacgatcttgttatcgtcaaaaaccttcttcgcaagagttgtttttcc |
1065 |
Q |
| |
|
||| || |||||||||| ||||| |||||| ||||||||| ||||| | ||||| |||||||| |
|
|
| T |
29610897 |
acacgattgtcaaagtgttcaacgaccttgtt---gtcaaaaactttcttagttagagtagtttttcc |
29610961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1117 - 1204
Target Start/End: Original strand, 29611001 - 29611088
Alignment:
| Q |
1117 |
taccaaccaatcaattagtatgtttcttggaacttcaaagcctacaacatcatcttcatcgatacaaaattgagcctttcgaaggttc |
1204 |
Q |
| |
|
||||| ||||||||||| ||| | |||||| ||||||||||| |||| ||| ||||||| || ||||| ||||||||||||||||| |
|
|
| T |
29611001 |
taccagccaatcaattaatatttctcttggctcttcaaagcctgcaacgtcagcttcatccatgtaaaatggagcctttcgaaggttc |
29611088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 788 - 825
Target Start/End: Original strand, 29604805 - 29604842
Alignment:
| Q |
788 |
atatcatcccaaaaatgtaagttccatacgtcatcaaa |
825 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
29604805 |
atatcatcccaaaaatgtaagttccatacatcgtcaaa |
29604842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 57; Significance: 4e-23; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 57 - 321
Target Start/End: Complemental strand, 34990310 - 34990046
Alignment:
| Q |
57 |
ttgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaa |
156 |
Q |
| |
|
|||||||||||||||||| | | |||||||||||||| || || || || | | || ||||||||||||||| || ||||| ||||||||||||| |
|
|
| T |
34990310 |
ttgctattgataggcgtctgatagttccacttaaagatgaatgatcgtcatcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcat |
34990211 |
T |
|
| Q |
157 |
tgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatat |
256 |
Q |
| |
|
||| | ||||||||||||||||||||| | | | |||||||||| |||| ||| |||||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
34990210 |
catatgtatcagatcatgaacacaacaacttctagtttttccatcaatgctaactgaggatacttgcaccaaacttctacgaatcaactctgttaaatat |
34990111 |
T |
|
| Q |
257 |
ccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattg |
321 |
Q |
| |
|
| ||| |||| |||||||| || || | || || |||||||| || |||||||| |||||||| |
|
|
| T |
34990110 |
ctttcttcaacttcttccaaagtcttcccactttcctctttcacaaacccttcagctatccattg |
34990046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 57 - 276
Target Start/End: Complemental strand, 34976464 - 34976245
Alignment:
| Q |
57 |
ttgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaa |
156 |
Q |
| |
|
|||||||||||||||||| || | |||||||||||||| || |||| || | | || ||||||||||||||| || ||||| ||||||||||||| |
|
|
| T |
34976464 |
ttgctattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcat |
34976365 |
T |
|
| Q |
157 |
tgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatat |
256 |
Q |
| |
|
| | | ||||||||||||||||||||||| | |||||||||| |||| ||| |||||||||||||| || || ||||| |||||||||||| |
|
|
| T |
34976364 |
catacgtatcagatcatgaacacaacaacttttaggctttccatcaattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatat |
34976265 |
T |
|
| Q |
257 |
ccatctgcaacatcttccaa |
276 |
Q |
| |
|
|| | |||||| |||||||| |
|
|
| T |
34976264 |
ccttttgcaacttcttccaa |
34976245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 57 - 276
Target Start/End: Complemental strand, 34983575 - 34983356
Alignment:
| Q |
57 |
ttgctattgataggcgtcgaaccatcccacttaaagatgattggtcatcctcgctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaa |
156 |
Q |
| |
|
|||||||||||||||||| || | |||||||||||||| || |||| || | | || ||||||||||||||| || ||||| ||||||||||||| |
|
|
| T |
34983575 |
ttgctattgataggcgtctaatagttccacttaaagatgaatgaccatcttcattgaaatgcttgcaaaaacttaaatcctcacacttttcaaggatcat |
34983476 |
T |
|
| Q |
157 |
tgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatat |
256 |
Q |
| |
|
| | | ||||||||||||||||||||||| | |||||||||| |||| ||| |||||||||||||| || || ||||| |||||||||||| |
|
|
| T |
34983475 |
catacgtatcagatcatgaacacaacaacttttaggctttccatcaattctaactgaggatacttgcaccaaacttcgacgaatcaactctgttaaatat |
34983376 |
T |
|
| Q |
257 |
ccatctgcaacatcttccaa |
276 |
Q |
| |
|
|| | |||||| |||||||| |
|
|
| T |
34983375 |
ccttttgcaacttcttccaa |
34983356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 749 - 1015
Target Start/End: Complemental strand, 34980551 - 34980285
Alignment:
| Q |
749 |
atcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaaaactataacataccttttttcct |
848 |
Q |
| |
|
||||||| ||| |||||||||||| ||| | || ||| || |||||||||||| | ||||||||| |||||||| || | ||||||||| |||| || |
|
|
| T |
34980551 |
atcttactaccatttttattatcactcacaacatattcaatctcatcccaaaaacttgtgttccatacatcatcaaacacaaaaacatacctctttttct |
34980452 |
T |
|
| Q |
849 |
gcaagtagttcctcacttcatcaaccaatgactctcgattcatttgatgaatactttgggggagatttgctccttgttgttcgtaaaacttgtgcaacat |
948 |
Q |
| |
|
||||||| || |||| |||| || ||||| ||||||| ||||| | ||| || | ||| | |||||| ||||||||||| ||| | |||||| |
|
|
| T |
34980451 |
gcaagtaatttctcaactcataaatcaatgcatctcgatccatttcagtgatatcttcaagaggatgttctcctttttgttcgtaaagcttcttcaacat |
34980352 |
T |
|
| Q |
949 |
gtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgt |
1015 |
Q |
| |
|
| ||||||||| |||| |||||||||||||| |||||| ||||||||||| |||| ||||||||| |
|
|
| T |
34980351 |
gcgtctcagcaatacttcaatattgtatgattgtgacactgtgatccatacacgacattcaaagtgt |
34980285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 626 - 1015
Target Start/End: Complemental strand, 34989729 - 34989340
Alignment:
| Q |
626 |
aatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacat |
725 |
Q |
| |
|
|||| ||||||||||||||| || | ||||||||||||| || || ||||||| |||||||| ||| ||||||||||||||| | | ||||| |
|
|
| T |
34989729 |
aatgccttcttattgaacaaatcaattgattgttcttcagttaatggttgtagttcatgcacttcaataaatgaagatttcttacaatacatggcaacat |
34989630 |
T |
|
| Q |
726 |
ccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaa |
825 |
Q |
| |
|
|| | |||||||| || || |||||||||| ||| |||||||||||| ||| | || ||| || |||||||||||| | ||||||||| |||||||| |
|
|
| T |
34989629 |
ccttatttcttgtggtaataaatatcttactaccatttttattatcactcacaacatattcaatctcatcccaaaaacttgtgttccatacatcatcaaa |
34989530 |
T |
|
| Q |
826 |
aactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttga-tgaatactttgggggagatttgctccttg |
924 |
Q |
| |
|
|| | ||||||||| |||| ||||||||| || |||| ||| || ||||| |||||| ||||| | ||| | |||| || | | ||| |||||| |
|
|
| T |
34989529 |
cacaaaaacatacctctttttctgcaagtactttctcaactcagaaatcaatgcacctcgatccatttcagtgattcctttaggag-gtttttctccttt |
34989431 |
T |
|
| Q |
925 |
ttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgt |
1015 |
Q |
| |
|
|||| |||||| ||| | |||||||| ||| |||| |||| | |||| |||||| |||||| ||||||||||| |||| ||||||||| |
|
|
| T |
34989430 |
ttgtccgtaaagcttctccaacatgtgtctcgacaatacttcagtgttgtttgattgtgacactgtgatccatacacgacattcaaagtgt |
34989340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 167 - 329
Target Start/End: Original strand, 2304969 - 2305131
Alignment:
| Q |
167 |
agatcatgaacacaacaactttttgctcttccatcaatactaattgaaactacttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaa |
266 |
Q |
| |
|
||||||||||||||||||||||| | | |||||||||| |||| ||| |||||||||||||| || || ||||| |||| ||||||||| ||||||| |
|
|
| T |
2304969 |
agatcatgaacacaacaacttttagattttccatcaatgctaactgaggatacttgcaccaaacttcgacgaatcaactctgataaatatccttctgcaa |
2305068 |
T |
|
| Q |
267 |
catcttccaatgtttttacgctatcatctttcacgaatccttcagccatccattgccgaatca |
329 |
Q |
| |
|
| |||||||| || || | || || || ||||| || |||||||| ||||| || ||||||| |
|
|
| T |
2305069 |
cttcttccaaagtcttcccactttcctccttcacaaacccttcagctatccactgtcgaatca |
2305131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 677 - 1015
Target Start/End: Original strand, 2305490 - 2305828
Alignment:
| Q |
677 |
agttcatacacttcaacaaaagaagatttcttacaagcatttgaaacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatca |
776 |
Q |
| |
|
||||||| ||||| || ||||||||||||||||||| | | ||||||||| |||||||| || || |||||||||| ||| ||||||| |||| ||| |
|
|
| T |
2305490 |
agttcatgcacttgaataaaagaagatttcttacaatatatggcaacatccatatttcttgtggtaataaatatcttactaccatttttatgatcactca |
2305589 |
T |
|
| Q |
777 |
tagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaa |
876 |
Q |
| |
|
||||| ||| || |||||||||||| | ||||||||| | |||||| || | ||||||||| || | ||||||||| || |||| ||| || ||| |
|
|
| T |
2305590 |
tagcatattcaatctcatcccaaaaacttgtgttccatacattatcaaacacaaaaacatacctcttattctgcaagtactttctcaactcaaaaatcaa |
2305689 |
T |
|
| Q |
877 |
tgactctcgattcatttgatgaatactttgggggagatttgctccttgttgttcgtaaaacttgtgcaacatgtccctcagcaatccttctatattgtat |
976 |
Q |
| |
|
| |||||| ||||| || ||| || || ||| | || ||| |||||||| || ||| | ||||||| |||| ||| |||||||||||||| |
|
|
| T |
2305690 |
ttcacctcgatccatttcatagatatctttaggtagaaattctactttttgttcgtgaagcttcttcaacatgcatctcaacaagacttctatattgtat |
2305789 |
T |
|
| Q |
977 |
gattgagacactctgatccatacatgacaatcaaagtgt |
1015 |
Q |
| |
|
||||| |||| | ||||||||||| |||| ||||||||| |
|
|
| T |
2305790 |
gattgtgacattgtgatccatacacgacattcaaagtgt |
2305828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 748 - 1015
Target Start/End: Complemental strand, 34975772 - 34975505
Alignment:
| Q |
748 |
tatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtcatcaaaaactataacataccttttttcc |
847 |
Q |
| |
|
|||||||| ||| |||||||||||| ||| | || ||| || |||||||||||| | ||||||||| |||||||| || | ||||||||| |||| | |
|
|
| T |
34975772 |
tatcttactaccatttttattatcactcacaacatattcaatctcatcccaaaaacttgtgttccatacatcatcaaacacaaaaacatacctctttttc |
34975673 |
T |
|
| Q |
848 |
tgcaagtagttcctcacttcatcaaccaatgactctcgattcatttga-tgaatactttgggggagatttgctccttgttgttcgtaaaacttgtgcaac |
946 |
Q |
| |
|
|||||||| || |||| ||| || ||||| |||||| ||||| | ||| | |||| || | | ||| |||||| |||| |||||| ||| | |||| |
|
|
| T |
34975672 |
tgcaagtactttctcaactcagaaatcaatgcacctcgatccatttcagtgattcctttaggag-gtttttctcctttttgtccgtaaagcttctccaac |
34975574 |
T |
|
| Q |
947 |
atgtccctcagcaatccttctatattgtatgattgagacactctgatccatacatgacaatcaaagtgt |
1015 |
Q |
| |
|
|||| ||| |||| |||| | |||| |||||| |||||| ||||||||||| |||| ||||||||| |
|
|
| T |
34975573 |
atgtgtctcgacaatacttcagtgttgtgtgattgtgacactgtgatccatacacgacattcaaagtgt |
34975505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000005; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 872150 - 872224
Alignment:
| Q |
110 |
ctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaa |
184 |
Q |
| |
|
||||||| |||||||||| |||| || ||| |||||||||||||||| |||| | |||||||||||||| |||| |
|
|
| T |
872150 |
ctaatatgcttgcaaaaatttaaatcctcaaatttttcaaggatcaaatcatgtagtagatcatgaacacgacaa |
872224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 721 - 895
Target Start/End: Original strand, 872774 - 872948
Alignment:
| Q |
721 |
aacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtca |
820 |
Q |
| |
|
||||| |||||| ||| |||||| |||||||||| ||||||||||||||||| | | |||||| ||||||||| |||||||| | |||| | ||| |
|
|
| T |
872774 |
aacattcatgttcattgctgtgataaatatcttacttccctttttattatcaattacaacaaattcaatatcatccataaaatgtacgctccaaaaatca |
872873 |
T |
|
| Q |
821 |
tcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttga |
895 |
Q |
| |
|
| ||| || | ||| || | |||| ||||||||| || |||||||||| | ||||||| |||||| ||||||| |
|
|
| T |
872874 |
ttaaacacaacaacgtatgtcttttgctgcaagtaatttctcacttcattagtcaatgacactcgatccatttga |
872948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 1233427 - 1233501
Alignment:
| Q |
110 |
ctaatattcttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaa |
184 |
Q |
| |
|
||||||| |||||||||| |||| || ||| |||||||||||||||| |||| | |||||||||||||| |||| |
|
|
| T |
1233427 |
ctaatatgcttgcaaaaatttaaatcctcaaatttttcaaggatcaaatcatgtagtagatcatgaacacgacaa |
1233501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 721 - 895
Target Start/End: Original strand, 1234051 - 1234225
Alignment:
| Q |
721 |
aacatccatgtttcttgttgtgattaatatcttacaaccctttttattatcaatcatagcaaatttgatatcatcccaaaaatgtaagttccatacgtca |
820 |
Q |
| |
|
||||| |||||| ||| |||||| |||||||||| ||||||||||||||||| | | |||||| ||||||||| |||||||| | |||| | ||| |
|
|
| T |
1234051 |
aacattcatgttcattgctgtgataaatatcttacttccctttttattatcaattacaacaaattcaatatcatccataaaatgtacgctccaaaaatca |
1234150 |
T |
|
| Q |
821 |
tcaaaaactataacataccttttttcctgcaagtagttcctcacttcatcaaccaatgactctcgattcatttga |
895 |
Q |
| |
|
| ||| || | ||| || | |||| ||||||||| || |||||||||| | ||||||| |||||| ||||||| |
|
|
| T |
1234151 |
ttaaacacaacaacgtatgtcttttgctgcaagtaatttctcacttcattagtcaatgacactcgatccatttga |
1234225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000008; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 318
Target Start/End: Complemental strand, 40580966 - 40580766
Alignment:
| Q |
118 |
cttgcaaaaacttaattcttcacatttttcaaggatcaatgcatggactagatcatgaacacaacaactttttgctcttccatcaatactaattgaaact |
217 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| |||||| | | | | ||| |||||| |||||||||| | | |||||||||| |||||||| | |
|
|
| T |
40580966 |
cttgcaaaaacttaattcctcacacttttcatggatcatcatacgtatcaaatcgtgaacaaaacaacttttagtttttccatcaattctaattgaggat |
40580867 |
T |
|
| Q |
218 |
acttgcaccaaacctctactgatcaaatctgttaaatatccatctgcaacatcttccaatgtttttacgctatcatctttcacgaatccttcagccatcc |
317 |
Q |
| |
|
||||||||||||| | || ||||| || ||||||||| | || ||||| |||||||| || ||| | || || || ||||| || |||||||| |||| |
|
|
| T |
40580866 |
acttgcaccaaactacgacgaatcaactcagttaaatatacttcagcaacttcttccaaagtctttccactttcctccttcacaaacccttcagctatcc |
40580767 |
T |
|
| Q |
318 |
a |
318 |
Q |
| |
|
| |
|
|
| T |
40580766 |
a |
40580766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold1439
Description:
Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 626 - 765
Target Start/End: Original strand, 1547 - 1686
Alignment:
| Q |
626 |
aatgtcttcttattgaacaactccaaagattgttcttcagccaaacctttcagttcatacacttcaacaaaagaagatttcttacaagcatttgaaacat |
725 |
Q |
| |
|
|||| ||||||||| ||||| || || |||| |||||||| ||| || ||||||| |||||||| ||||||||||||||||||| | ||||| |
|
|
| T |
1547 |
aatgccttcttattaaacaaatcaaatgatttttcttcagttaaaggttgtagttcatgcacttcaataaaagaagatttcttacaatacacagcaacat |
1646 |
T |
|
| Q |
726 |
ccatgtttcttgttgtgattaatatcttacaacccttttt |
765 |
Q |
| |
|
|||| |||||||| || || |||||||||| ||| ||||| |
|
|
| T |
1647 |
ccatatttcttgtggtaataaatatcttactaccattttt |
1686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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