View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12185_low_2 (Length: 433)
Name: NF12185_low_2
Description: NF12185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12185_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 20 - 416
Target Start/End: Original strand, 13624255 - 13624651
Alignment:
| Q |
20 |
cctgactattaactttaccattaaagagacactaagcatgtatgcagtttgtccaaaagtggaaataacaattggacccatattcattaggtatctgtaa |
119 |
Q |
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| T |
13624255 |
cctgactattaacttcaccattaaagagacactaagcatgtatgcagtttgtccaaaagtggaaataacaattggacccatatttattaggtatctgtaa |
13624354 |
T |
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| Q |
120 |
aattacctaggatgggtgggataaaaacccgcattctcgatgtaatagaggcacgagtaatcattgacaaaagtttacgggtatggatgcaggtatctta |
219 |
Q |
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| T |
13624355 |
aattacctaggatgggtaggataaaaacccgcattctcgatgtaatagaggcatgagtaatcattgaaaaaagtgtactggtatggatgcaggtatctta |
13624454 |
T |
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| Q |
220 |
ctacccactaaatcacctacacgtactcttcactctctcttactttgaaatcgtaacgtctttgcaaacacctcccttcactttggaaaggagcgcacga |
319 |
Q |
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| T |
13624455 |
ctatccactaaatcatttacacgtactcttcactctatcttactttgaaatcgtaacgtctttgcaaacacctcccttcactttggaaaggagcgcacga |
13624554 |
T |
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| Q |
320 |
gaagaaccaaggagcaacatcatcaatcaattgacaaatttgtattccattgtatccaataatcatccactcgttacaacttttattttcatctaaa |
416 |
Q |
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| T |
13624555 |
gaagaaccaaggagcaacatcatcaatcaattgacaaatttgtattccattgtatccaataatcatccactcgttacaacttttattttcatctaaa |
13624651 |
T |
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