View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12186_low_1 (Length: 523)
Name: NF12186_low_1
Description: NF12186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12186_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 449; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 9 - 505
Target Start/End: Complemental strand, 41706210 - 41705714
Alignment:
| Q |
9 |
gaacctgtggggaccttttctagaacctttgaatatctaaatactactgttatatatgtcaactatcaaatggaatgtaataacagtttcttaagaaagt |
108 |
Q |
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| T |
41706210 |
gaacttgtggggaccttttctagaacctttgaatatctaaatactactgttatatatgtcaactatcaaatggaatgtaataacagtttcttaagaaagt |
41706111 |
T |
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| Q |
109 |
gcatgttttgttaatagccatctgatcaagcaacagacatatagtagtaatagtgatggataaggaaattatcttaacatgtgttttaaacattctctgt |
208 |
Q |
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| T |
41706110 |
gcatgttttgttaatagccatctgatcaagcaacagacatatagtagtaatagtgatggataaggaaattatcttaacatgtgttttaaacattctctgt |
41706011 |
T |
|
| Q |
209 |
gtagtcggccccacttaatgctactgcgataagacttggttgttgttgttctaattgatgatgcgttttaaatattatatcaattgtttgaaccctgaat |
308 |
Q |
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| T |
41706010 |
gtagtaggccccacttagtactactgcgataagacttggttgttgttgttctagttgatgatgcattttaaacattctatcagttgtttgaaccctgaat |
41705911 |
T |
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| Q |
309 |
tcactaacagatattaacaatgtaactctaacgtacttgacacatgaatcatgtgtcaagtagtcataacaaacataggcgaacgttgggattggctctt |
408 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
41705910 |
tcactaacagatattaacagtgtaactctaacgtacttgacacatgaatcatgtgtcaagtagtcataacaaacataggcgaacgttgggattggctatt |
41705811 |
T |
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| Q |
409 |
caattaccgatagtgcaacaattacaatggtttagttttcaagcattttgtatattttaataagtaatttatccactatgatatgctctttatatat |
505 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41705810 |
caattaccgatagtgcaacaattacaatggtctagttttcaagcattttgtatattttaataagtaatttatccactatgatatgctctttatatat |
41705714 |
T |
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