View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12187_high_5 (Length: 296)
Name: NF12187_high_5
Description: NF12187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12187_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 17 - 281
Target Start/End: Original strand, 47201686 - 47201950
Alignment:
| Q |
17 |
acaatatatctaagctacgtgattgatgaacttgaaatttacgaggttgaagatatcttctttgagaatatgttatggtggaaatggatgaaacaccaaa |
116 |
Q |
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| T |
47201686 |
acaatatatctaagctacgtgattgatgaacttgaaatttacgaggttgaagatatcttctttgagaatatgttatggtggaaatggatgaaacaccaaa |
47201785 |
T |
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| Q |
117 |
acccatcattgttgaagccatgaacgacaagtgaaaaaagttggctactttgtttcttcttataatactaataataagaatatggtactgttgaatttag |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
47201786 |
acccatcattgttgaagccatgaacgacaagtgaaaaaagttggctactttgtttcttcttataatactaataataagaatatggtactattgaatttag |
47201885 |
T |
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| Q |
217 |
tgtaacacacacactgtacttgtttgtttatcatgtacttgggtaaatgtcagaatcagaatcac |
281 |
Q |
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| T |
47201886 |
tgtaacacacacactgtacttgtttgtttatcatgtacttgggtaaatgtcagaatcagaatcac |
47201950 |
T |
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