View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12188_high_6 (Length: 421)

Name: NF12188_high_6
Description: NF12188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12188_high_6
NF12188_high_6
[»] scaffold0272 (2 HSPs)
scaffold0272 (99-403)||(11425-11729)
scaffold0272 (197-283)||(20960-21046)
[»] scaffold0016 (2 HSPs)
scaffold0016 (316-403)||(71888-71975)
scaffold0016 (110-157)||(193817-193864)
[»] chr2 (25 HSPs)
chr2 (197-283)||(17798964-17799050)
chr2 (197-283)||(9714984-9715070)
chr2 (197-283)||(40445665-40445751)
chr2 (197-283)||(3263127-3263213)
chr2 (198-282)||(23000621-23000705)
chr2 (197-283)||(8738964-8739050)
chr2 (197-283)||(26717276-26717362)
chr2 (217-283)||(34850788-34850854)
chr2 (197-283)||(315110-315200)
chr2 (201-283)||(36589847-36589929)
chr2 (99-157)||(20416013-20416071)
chr2 (221-283)||(24365005-24365067)
chr2 (199-283)||(40506297-40506381)
chr2 (110-157)||(28378146-28378193)
chr2 (197-234)||(40445738-40445775)
chr2 (239-283)||(19368646-19368690)
chr2 (201-244)||(9714964-9715007)
chr2 (201-244)||(17798944-17798987)
chr2 (201-244)||(19368667-19368710)
chr2 (201-244)||(34850831-34850874)
chr2 (250-283)||(19473179-19473212)
chr2 (132-177)||(21170796-21170841)
chr2 (201-234)||(40506368-40506401)
chr2 (110-162)||(24423816-24423868)
chr2 (147-183)||(28378105-28378141)
[»] scaffold0693 (1 HSPs)
scaffold0693 (197-283)||(4657-4743)
[»] chr6 (15 HSPs)
chr6 (197-283)||(10893981-10894067)
chr6 (197-281)||(11746116-11746200)
chr6 (201-283)||(3534914-3534996)
chr6 (197-282)||(1896990-1897075)
chr6 (199-283)||(9067567-9067651)
chr6 (197-279)||(20080210-20080292)
chr6 (201-283)||(15273114-15273196)
chr6 (327-398)||(21303698-21303770)
chr6 (110-157)||(18924393-18924440)
chr6 (110-177)||(22287757-22287824)
chr6 (147-196)||(13915006-13915055)
chr6 (117-157)||(13914961-13915001)
chr6 (197-244)||(3534890-3534937)
chr6 (201-244)||(10894044-10894087)
chr6 (111-157)||(20058908-20058954)
[»] chr4 (25 HSPs)
chr4 (197-283)||(10046047-10046133)
chr4 (197-283)||(56296709-56296795)
chr4 (197-282)||(33338141-33338226)
chr4 (201-283)||(3770295-3770377)
chr4 (197-283)||(18994938-18995024)
chr4 (197-281)||(19869295-19869379)
chr4 (197-281)||(46282878-46282962)
chr4 (201-279)||(4902295-4902373)
chr4 (197-283)||(18994759-18994845)
chr4 (201-283)||(39332415-39332497)
chr4 (201-283)||(43821833-43821915)
chr4 (201-281)||(1377702-1377782)
chr4 (221-283)||(23769919-23769981)
chr4 (100-157)||(19572832-19572889)
chr4 (110-157)||(11537785-11537832)
chr4 (201-244)||(3770275-3770318)
chr4 (201-244)||(4902232-4902275)
chr4 (201-244)||(10046110-10046153)
chr4 (201-244)||(56296772-56296815)
chr4 (147-205)||(19572894-19572952)
chr4 (250-283)||(4902252-4902285)
chr4 (197-246)||(13019364-13019413)
chr4 (239-283)||(13021132-13021176)
chr4 (118-174)||(15205709-15205765)
chr4 (105-177)||(39519148-39519220)
[»] chr3 (42 HSPs)
chr3 (197-283)||(27448906-27448992)
chr3 (110-205)||(9389514-9389609)
chr3 (201-283)||(7858097-7858179)
chr3 (197-283)||(47423263-47423349)
chr3 (201-281)||(14133758-14133838)
chr3 (201-283)||(12881331-12881413)
chr3 (197-283)||(32593881-32593966)
chr3 (197-283)||(40082304-40082390)
chr3 (199-283)||(25053696-25053780)
chr3 (197-283)||(52613434-52613520)
chr3 (198-283)||(21841843-21841928)
chr3 (197-283)||(14015278-14015364)
chr3 (198-278)||(34942831-34942910)
chr3 (99-157)||(4406117-4406175)
chr3 (201-283)||(20982395-20982477)
chr3 (197-281)||(42465809-42465891)
chr3 (203-283)||(26012787-26012866)
chr3 (110-157)||(16669412-16669459)
chr3 (201-283)||(27719823-27719904)
chr3 (110-157)||(1792871-1792918)
chr3 (110-157)||(11215026-11215073)
chr3 (110-157)||(13073580-13073627)
chr3 (201-244)||(14015258-14015301)
chr3 (197-244)||(43678876-43678923)
chr3 (111-177)||(7802897-7802963)
chr3 (147-205)||(14256214-14256272)
chr3 (147-196)||(13073632-13073681)
chr3 (201-244)||(2711796-2711839)
chr3 (201-244)||(7858077-7858120)
chr3 (110-157)||(14256277-14256324)
chr3 (112-159)||(14319939-14319986)
chr3 (110-177)||(15225183-15225250)
chr3 (201-244)||(21841823-21841866)
chr3 (201-244)||(27448969-27449012)
chr3 (197-244)||(32593943-32593990)
chr3 (147-189)||(1792824-1792866)
chr3 (201-234)||(26012853-26012886)
chr3 (201-234)||(27719803-27719836)
chr3 (201-254)||(51336986-51337039)
chr3 (201-234)||(52613507-52613540)
chr3 (153-205)||(4406186-4406238)
chr3 (153-205)||(14319878-14319930)
[»] chr1 (19 HSPs)
chr1 (197-283)||(27855678-27855764)
chr1 (197-283)||(42589537-42589623)
chr1 (197-283)||(45664275-45664361)
chr1 (197-283)||(52233522-52233608)
chr1 (197-282)||(26434826-26434911)
chr1 (197-272)||(43670460-43670535)
chr1 (197-283)||(10279813-10279899)
chr1 (201-283)||(40815002-40815083)
chr1 (201-267)||(3384060-3384125)
chr1 (201-279)||(18589945-18590023)
chr1 (209-281)||(30289287-30289356)
chr1 (112-177)||(26562241-26562306)
chr1 (111-191)||(152662-152742)
chr1 (134-177)||(4169016-4169059)
chr1 (201-244)||(27855658-27855701)
chr1 (201-244)||(52233585-52233628)
chr1 (197-234)||(18590014-18590051)
chr1 (250-283)||(36230668-36230701)
chr1 (201-234)||(45012728-45012761)
[»] chr8 (19 HSPs)
chr8 (197-282)||(4106960-4107045)
chr8 (196-283)||(20791108-20791195)
chr8 (197-283)||(5577411-5577497)
chr8 (197-283)||(7653468-7653554)
chr8 (201-283)||(41014926-41015008)
chr8 (200-281)||(40918511-40918592)
chr8 (201-282)||(41554703-41554784)
chr8 (201-279)||(17943454-17943532)
chr8 (111-177)||(19226734-19226800)
chr8 (111-191)||(30323652-30323732)
chr8 (147-205)||(18155651-18155709)
chr8 (201-271)||(32692828-32692898)
chr8 (110-157)||(18155599-18155646)
chr8 (201-257)||(41206294-41206350)
chr8 (201-245)||(42866266-42866310)
chr8 (201-244)||(4107023-4107066)
chr8 (205-244)||(41014910-41014949)
chr8 (118-183)||(23467776-23467841)
chr8 (145-185)||(19130519-19130559)
[»] scaffold0121 (2 HSPs)
scaffold0121 (201-283)||(22391-22473)
scaffold0121 (201-244)||(22450-22493)
[»] chr7 (24 HSPs)
chr7 (201-283)||(43408320-43408402)
chr7 (197-281)||(10986117-10986201)
chr7 (199-283)||(10356211-10356295)
chr7 (205-281)||(19233457-19233532)
chr7 (201-283)||(10385565-10385647)
chr7 (197-279)||(16705575-16705657)
chr7 (197-279)||(17679811-17679893)
chr7 (201-283)||(19778370-19778452)
chr7 (197-279)||(18798122-18798203)
chr7 (218-283)||(26872497-26872562)
chr7 (197-281)||(11275303-11275386)
chr7 (118-185)||(15886717-15886784)
chr7 (217-283)||(44189516-44189582)
chr7 (197-254)||(40436140-40436197)
chr7 (197-244)||(10385624-10385671)
chr7 (201-244)||(19778429-19778472)
chr7 (197-244)||(43408379-43408426)
chr7 (197-234)||(18798194-18798231)
chr7 (197-244)||(26872473-26872520)
chr7 (147-193)||(25213779-25213825)
chr7 (201-233)||(10356283-10356315)
chr7 (197-237)||(16705548-16705587)
chr7 (197-237)||(17679784-17679823)
chr7 (219-283)||(49081469-49081533)
[»] chr5 (22 HSPs)
chr5 (201-282)||(43585901-43585982)
chr5 (201-283)||(39085-39167)
chr5 (197-283)||(5891616-5891702)
chr5 (201-283)||(26036331-26036413)
chr5 (201-283)||(32555860-32555942)
chr5 (197-279)||(41032326-41032407)
chr5 (201-283)||(3728380-3728461)
chr5 (201-282)||(9072085-9072166)
chr5 (201-283)||(28251514-28251595)
chr5 (220-283)||(9559970-9560033)
chr5 (201-244)||(16079352-16079395)
chr5 (110-157)||(17448440-17448487)
chr5 (201-244)||(26036390-26036433)
chr5 (110-157)||(34061055-34061102)
chr5 (111-185)||(1113014-1113088)
chr5 (147-205)||(17448492-17448550)
chr5 (118-191)||(23404866-23404939)
chr5 (201-244)||(35818376-35818419)
chr5 (147-205)||(34060992-34061050)
chr5 (250-283)||(20465619-20465652)
chr5 (201-234)||(32555929-32555962)
chr5 (201-233)||(5891596-5891628)
[»] scaffold1067 (2 HSPs)
scaffold1067 (197-283)||(1447-1533)
scaffold1067 (197-244)||(1510-1557)
[»] scaffold0328 (2 HSPs)
scaffold0328 (197-283)||(15890-15975)
scaffold0328 (197-244)||(15866-15913)
[»] scaffold0154 (1 HSPs)
scaffold0154 (201-283)||(26380-26464)
[»] scaffold0213 (2 HSPs)
scaffold0213 (201-283)||(21182-21264)
scaffold0213 (201-234)||(21162-21195)
[»] scaffold0017 (1 HSPs)
scaffold0017 (99-190)||(177283-177374)
[»] scaffold0474 (1 HSPs)
scaffold0474 (111-191)||(59-139)
[»] scaffold0411 (4 HSPs)
scaffold0411 (110-157)||(1415-1462)
scaffold0411 (110-157)||(5446-5493)
scaffold0411 (147-183)||(1374-1410)
scaffold0411 (147-183)||(5405-5441)
[»] scaffold0398 (2 HSPs)
scaffold0398 (128-177)||(2727-2776)
scaffold0398 (128-177)||(10982-11031)
[»] scaffold0195 (1 HSPs)
scaffold0195 (105-157)||(31653-31705)
[»] scaffold0014 (2 HSPs)
scaffold0014 (105-165)||(212410-212470)
scaffold0014 (105-165)||(218279-218339)
[»] scaffold0201 (1 HSPs)
scaffold0201 (110-157)||(252-299)
[»] scaffold0251 (1 HSPs)
scaffold0251 (111-177)||(24359-24425)
[»] scaffold2119 (1 HSPs)
scaffold2119 (128-177)||(726-775)


Alignment Details
Target: scaffold0272 (Bit Score: 301; Significance: 1e-169; HSPs: 2)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 99 - 403
Target Start/End: Complemental strand, 11729 - 11425
Alignment:
Q  99 cagaaacaacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctggttgggggtttat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11729 cagaaacaacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaggaacaatttgctcagggacagtttgagtttctggttgggggtttat 11630  T
Q  199 tttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggacttaagtaatggactta 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11629 tttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggacttaagtaatggactta 11530  T
Q  299 atgaaaagataggggtccaaaaactctgttaaatctatttattagcaaagtaatggaaatgaaaaaagagtccaagttcatattcgtgcattctccattg 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11529 atgaaaagataggggtccaaaaactctgttaaatctatttattagcaaagtaatggaaatgaaaaaagagtccaagttcatattcgtgcattctccattg 11430  T
Q  399 gtaat 403  Q
    |||||    
T  11429 gtaat 11425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 20960 - 21046
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20960 attttttggcagttttggacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 21046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 84; Significance: 9e-40; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 316 - 403
Target Start/End: Original strand, 71888 - 71975
Alignment:
Q  316 caaaaactctgttaaatctatttattagcaaagtaatggaaatgaaaaaagagtccaagttcatattcgtgcattctccattggtaat 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  71888 caaaaactctgttaaatctatttattagcaaagtaatggaaatgaaaaaagagtccaagttcatattcgtgcattctccattgataat 71975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 193817 - 193864
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||||||| ||||||| |||||||| |||||    
T  193817 tgttcaggaacactttgctctaggttagaagcaccttgttcaggaaca 193864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 17799050 - 17798964
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||||||||    
T  17799050 attttttggcagttttggacccccagtccattagtgaggtgtcacgtggccccctaaataatacacgtggcacctcactaatggact 17798964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 9715070 - 9714984
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||| ||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  9715070 attttttggcagttttggaccctcagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 9714984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 40445665 - 40445751
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||| ||||||||||| |||||||||    
T  40445665 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacatgtggcacctcactaatggact 40445751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 3263127 - 3263213
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||| |||||||| ||||||||||||||||||||| || ||||||| || |||||||||||| ||||||||||| |||||||||    
T  3263127 atttttttgcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacatgtggcacctcactaatggact 3263213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 23000621 - 23000705
Alignment:
Q  198 ttttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggac 282  Q
    |||||| | |||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| ||||||||    
T  23000621 tttttttgtagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggac 23000705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 8739050 - 8738964
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||||| |||| ||||||||||| ||||||||| || ||||||| ||  ||||||||||||||||||||||| |||||||||    
T  8739050 attttttggcaattttggacccccagtctattagtgaggtgccacgtggccccttaaataatacacgtggcacctcactaatggact 8738964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 26717362 - 26717276
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||| |||||||| ||||||||||||||||||||| || || |||| || |||||||||||| ||||||||||| |||||||||    
T  26717362 atttttttgcagttttggacccccagtccattagtgaggtgccatgtggccccctaaataatacatgtggcacctcactaatggact 26717276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 34850788 - 34850854
Alignment:
Q  217 ccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  34850788 ccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 34850854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 315110 - 315200
Alignment:
Q  197 attttttggcagttttagaccccca-----gtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||     ||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  315110 attttttggcagttttggacccccaccccagtccattagtgag-tgccacgtggccccctaaataatacacgtggcacctcaataatggact 315200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 36589929 - 36589847
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||| | ||||||||||||| || ||||||| ||  ||||||||||| ||||||||||| |||||||||    
T  36589929 tttggcagttttggaccctctgtccattagtgaggtgccacgtggccccttaaataatacatgtggcacctcactaatggact 36589847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 20416071 - 20416013
Alignment:
Q  99 cagaaacaacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  20416071 cagaagcaatgtgttcaggaacactttgctctaggtcagaagcaccttgttcatgaaca 20416013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 24365005 - 24365067
Alignment:
Q  221 agtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||| || ||||| | || |||||||||||||||||||||||| |||||||||    
T  24365005 agtccattagtgaggtgccacgttgccccctaaataatacacgtggcacctcactaatggact 24365067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 40506297 - 40506381
Alignment:
Q  199 tttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||| ||||| ||||| ||| ||||| || || |||| || |||||||||||| |||| |||||| |||||||||    
T  40506297 tttttggcagttttggaccctcagtctattggtgaggtgccatgtggccccctaaataatacatgtggtacctcactaatggact 40506381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 28378193 - 28378146
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  28378193 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 28378146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 40445775 - 40445738
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||||||| |||||||||||||||||||||    
T  40445775 attttttggcagttttggacccccagtccattagtgag 40445738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 19368646 - 19368690
Alignment:
Q  239 cacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||| || |||||||||||||||||||||||| |||||||||    
T  19368646 cacgtggccccctaaataatacacgtggcacctcactaatggact 19368690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 9714964 - 9715007
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  9714964 tttggcagttttggacccccagtccattagtgaggtgccacgtg 9715007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 17798944 - 17798987
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  17798944 tttggcagttttggacccccagtccattagtgaggtgccacgtg 17798987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 19368710 - 19368667
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  19368710 tttggcagttttggacccccagtccattagtgaggtgccacgtg 19368667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 34850874 - 34850831
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  34850874 tttggcagttttggacccccagtccattagtgaggtgccacgtg 34850831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 19473179 - 19473212
Alignment:
Q  250 ctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||||||||||| |||||||||    
T  19473179 ctaaataatacacgtggcacctcactaatggact 19473212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 21170841 - 21170796
Alignment:
Q  132 ggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    ||||||||||||| |||||| |||||||||| ||||| ||||||||    
T  21170841 ggtcagaagcaacctgttcaggaacaatttgttcaggaacagtttg 21170796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 40506401 - 40506368
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||| |||||||||||||||||||||    
T  40506401 tttggcagttttggacccccagtccattagtgag 40506368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 24423868 - 24423816
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttg 162  Q
    |||||| |||||||||| ||| |||||||||||||||||| | ||||| ||||    
T  24423868 tgttcaggaacactttgttcttggtcagaagcaacttgtttaggaacactttg 24423816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 28378141 - 28378105
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttc 183  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  28378141 gttcaggaacaatttgctcagggacggtttgagtttc 28378105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 4743 - 4657
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  4743 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 4657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 10893981 - 10894067
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  10893981 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 10894067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 11746200 - 11746116
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||| |||||||    
T  11746200 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccctctaaataatacatgtggcacctcactaatgga 11746116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 3534996 - 3534914
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||| |||||||||    
T  3534996 tttggcagttttggacccccagtccattagtgaggttccacgtggccctctaaataatacacgtggcacctcactaatggact 3534914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 1896990 - 1897075
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggac 282  Q
    ||||||||| |||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| ||||||||    
T  1896990 attttttggtagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggac 1897075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 9067651 - 9067567
Alignment:
Q  199 tttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||| || ||||||||||||||||| |||||| |||||||||    
T  9067651 tttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggtacctcactaatggact 9067567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 20080210 - 20080292
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatg 279  Q
    |||||||||||||||| |||| |||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||    
T  20080210 attttttggcagttttggaccaccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatg 20080292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 15273196 - 15273114
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||| ||||||||||||||| || ||||||| |  |||||||||||||||||||||||| |||||||||    
T  15273196 tttggcagttttggacccacagtccattagtgaggtgccacgtggcctcctaaataatacacgtggcacctcactaatggact 15273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 398
Target Start/End: Complemental strand, 21303770 - 21303698
Alignment:
Q  327 ttaaatctattt-attagcaaagtaatggaaatgaaaaaagagtccaagttcatattcgtgcattctccattg 398  Q
    |||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||    
T  21303770 ttaaatatatttgattagcaaagtaatttaaatgaaaaaagagtccaagttcatattctggcattctccattg 21303698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 18924440 - 18924393
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||    
T  18924440 tgttcaggaacactttgctctaggtcagaagcaccttgttcaggaaca 18924393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 22287757 - 22287824
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    |||||| |||||||||||||| ||||||||| ||||||||| |||||| |||| ||||| ||| ||||    
T  22287757 tgttcaggaacactttgctcttggtcagaagtaacttgttcgagaacagtttgttcaggaacattttg 22287824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 13915006 - 13915055
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttgggggttt 196  Q
    ||||| ||||||||||||||||||| ||||||||||| | ||||||||||    
T  13915006 gttcaggaacaatttgctcagggacggtttgagtttcagtttgggggttt 13915055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 13914961 - 13915001
Alignment:
Q  117 gaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  13914961 gaacactttgctcttggtcagaagcaacttgttcaggaaca 13915001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 3534890 - 3534937
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    ||||||| |||||||| ||||||||||||||||||||| || ||||||    
T  3534890 atttttttgcagttttggacccccagtccattagtgaggtgccacgtg 3534937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 10894087 - 10894044
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  10894087 tttggcagttttggacccccagtccattagtgaggtgccacgtg 10894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 20058954 - 20058908
Alignment:
Q  111 gttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    ||||| ||||| |||| |||||||||||||||||||||||| |||||    
T  20058954 gttcaggaacagtttgttctaggtcagaagcaacttgttcaggaaca 20058908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 10046047 - 10046133
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  10046047 attttttggcagtttttgacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 10046133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 56296709 - 56296795
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  56296709 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 56296795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 33338141 - 33338226
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggac 282  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| ||||||||    
T  33338141 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggac 33338226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 3770377 - 3770295
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  3770377 tttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 3770295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 18995024 - 18994938
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| | |||||||    
T  18995024 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactgatggact 18994938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 19869379 - 19869295
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    |||||||||||||||| ||||||||||||||||||||| || || |||| || |||||||||||||||||||||||| |||||||    
T  19869379 attttttggcagttttggacccccagtccattagtgaggtgccatgtggccccctaaataatacacgtggcacctcactaatgga 19869295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 46282962 - 46282878
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||||||||||||| |||||||||| |||||||    
T  46282962 attttttgacagttttggacccccagtccattagtgaggtgtcacgtggccccctaaataatacacatggcacctcactaatgga 46282878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 4902373 - 4902295
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatg 279  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||    
T  4902373 tttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatg 4902295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 18994759 - 18994845
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| |||||||||||||||||| || || ||||||| || ||||||||||||||| |||||||| |||||||||    
T  18994759 attttttggcagttttggacccccagtccattagtaaggtgccacgtggccccctaaataatacacgtcgcacctcactaatggact 18994845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 39332415 - 39332497
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| ||  ||||||||||||||||||||||| |||||||||    
T  39332415 tttggcagttttggacccccagtccattagtgaggtgccacgtggccccgtaaataatacacgtggcacctcactaatggact 39332497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 43821915 - 43821833
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| |||||| |||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  43821915 tttggcagttttggacccctagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 43821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 1377702 - 1377782
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    |||||||||||| ||||||||||||||||||||| || ||||||  || |||||||||||||||||||||||  |||||||    
T  1377702 tttggcagttttggacccccagtccattagtgaggtgccacgtgaccccctaaataatacacgtggcacctcgctaatgga 1377782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 23769981 - 23769919
Alignment:
Q  221 agtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||| || |||||||  | |||||||||||||||||||||||| |||||||||    
T  23769981 agtccattagtgaggtgccacgtggcaccctaaataatacacgtggcacctcactaatggact 23769919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 19572832 - 19572889
Alignment:
Q  100 agaaacaacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||||| ||||||| ||||| |||||||| |||||||||||||||||||| |||||    
T  19572832 agaaacaaagtgttcaggaacattttgctcttggtcagaagcaacttgttcaggaaca 19572889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 11537785 - 11537832
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  11537785 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 11537832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 3770275 - 3770318
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  3770275 tttggcagttttggacccccagtccattagtgaggtgccacgtg 3770318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 4902232 - 4902275
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  4902232 tttggcagttttggacccccagtccattagtgaggtgccacgtg 4902275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 10046153 - 10046110
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  10046153 tttggcagttttggacccccagtccattagtgaggtgccacgtg 10046110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 56296815 - 56296772
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  56296815 tttggcagttttggacccccagtccattagtgaggtgccacgtg 56296772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 19572894 - 19572952
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttgggggtttattttttgg 205  Q
    ||||| ||||||||||||||||||| ||||||||||||  ||||| |||| ||| ||||    
T  19572894 gttcaggaacaatttgctcagggacggtttgagtttctttttgggtgtttgtttgttgg 19572952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 4902285 - 4902252
Alignment:
Q  250 ctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||||||||||| |||||||||    
T  4902285 ctaaataatacacgtggcacctcactaatggact 4902252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 13019364 - 13019413
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggt 246  Q
    |||||||||||||||| |||||  |||||||||||||| || ||||||||    
T  13019364 attttttggcagttttggacccttagtccattagtgaggtgccacgtggt 13019413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 13021132 - 13021176
Alignment:
Q  239 cacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||| || |||||||||||| ||||||||||| |||||||||    
T  13021132 cacgtggccccctaaataatacatgtggcacctcactaatggact 13021176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 15205765 - 15205709
Alignment:
Q  118 aacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagt 174  Q
    ||||||||| ||||||||||||||| |||||||| ||||| | || ||||| |||||    
T  15205765 aacactttgttctaggtcagaagcaccttgttcaggaacagtatgttcaggaacagt 15205709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 39519220 - 39519148
Alignment:
Q  105 caacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    |||| |||||| ||||| |||||||| ||||| ||||||||||||||  |||| |||| ||||| ||| ||||    
T  39519220 caacttgttcaggaacattttgctcttggtcaaaagcaacttgttcagaaacagtttgttcaggaacactttg 39519148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 27448906 - 27448992
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  27448906 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 27448992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 9389609 - 9389514
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctggttgggggtttattttttgg 205  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||| |||| ||| ||||    
T  9389609 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagtttgctcagggacggtttgagtttcttgttgggtgtttgtttgttgg 9389514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 7858179 - 7858097
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||| ||||||||||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  7858179 tttgacagttttagacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 7858097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 47423349 - 47423263
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||| ||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  47423349 attttttggcagttttggacccccagtccatttgtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 47423263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 14133838 - 14133758
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||    
T  14133838 tttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatgga 14133758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 12881331 - 12881413
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||| ||||||||||||| ||| |||||    
T  12881331 tttggcagttttggacccccagtccattagtgaggtgccacgtggccctctaaataatatacgtggcacctcactaaaggact 12881413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 32593881 - 32593966
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| |||||||| |||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  32593881 attttttggcagttttggacccccaatccattagtgaggtgccacgtgg-cccctaaataatacacgtggcacctcactaatggact 32593966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 40082304 - 40082390
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| |||||||||||||| |||||| || ||||||| || |||||||||||||||||||||||| | |||||||    
T  40082304 attttttggcagttttggacccccagtccatcagtgaggtgccacgtggccccctaaataatacacgtggcacctcactgatggact 40082390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 25053696 - 25053780
Alignment:
Q  199 tttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||| ||||| |||||||||| |||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  25053696 tttttggctgttttggacccccagttcattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 25053780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 52613434 - 52613520
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| || |||||||||||||||||| || | ||||| || |||||||||||| ||||||||||| |||||||||    
T  52613434 attttttggcagttttggaaccccagtccattagtgaggtgccgcgtggccccctaaataatacatgtggcacctcactaatggact 52613520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 283
Target Start/End: Complemental strand, 21841928 - 21841843
Alignment:
Q  198 ttttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||| |||||||| |||||||| |||||||||||| || ||||||  || |||||||||||||||||||||||| |||||||||    
T  21841928 tttttttgcagttttggacccccaatccattagtgaggtgccacgtgaccccctaaataatacacgtggcacctcactaatggact 21841843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 14015364 - 14015278
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||| ||||||||||| ||||| | ||||||||||||| || ||||||| || |||||||||||||||| ||||||| |||||||||    
T  14015364 atttcttggcagttttggaccctcggtccattagtgaggtgccacgtggccccctaaataatacacgtgacacctcactaatggact 14015278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 34942831 - 34942910
Alignment:
Q  198 ttttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaat 278  Q
    ||||||||||||||| |||||| |||||||||||||| || ||||||| || |||||||| ||||||||||||||| ||||    
T  34942831 ttttttggcagttttggacccc-agtccattagtgaggtgccacgtggccccctaaataaaacacgtggcacctcactaat 34942910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 4406117 - 4406175
Alignment:
Q  99 cagaaacaacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||||| |||||    
T  4406117 cagaaacaatgtgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 4406175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 20982477 - 20982395
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| |||||||||| |||||||||| || || |||| || |||||||||||| | ||||||||| |||||||||    
T  20982477 tttggcagttttggacccccagttcattagtgaggtgccatgtggccccctaaataatacatgcggcacctcactaatggact 20982395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 42465891 - 42465809
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    ||||||||||||||||||||||  |||||| ||||||| || ||| ||  || |||||||||||||||||||||||| |||||||    
T  42465891 attttttggcagttttagaccc--agtccaatagtgaggtgccacctgaccccctaaataatacacgtggcacctcactaatgga 42465809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 26012787 - 26012866
Alignment:
Q  203 tggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||| |||||  |||||||||||||| || ||||||| || ||||||||||||||||| |||||| |||||||||    
T  26012787 tggcagttttggaccca-agtccattagtgaggtgccacgtggccccctaaataatacacgtggaacctcactaatggact 26012866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 16669459 - 16669412
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  16669459 tgttcatgaacattttgctctaggtcagaagcaacttgttcaggaaca 16669412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 27719904 - 27719823
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| |||||| |||| ||||||||| || ||||||| |  |||||||||||| ||||||||||| |||||||||    
T  27719904 tttggcagttttggacccc-agtctattagtgaggtgccacgtggcctcctaaataatacatgtggcacctcactaatggact 27719823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 1792918 - 1792871
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  1792918 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 1792871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 11215073 - 11215026
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  11215073 tgttcaggaacactttgctataggtcagaagcaccttgttcaagaaca 11215026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 13073580 - 13073627
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  13073580 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 13073627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 14015258 - 14015301
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  14015258 tttggcagttttggacccccagtccattagtgaggtgtcacgtg 14015301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 43678923 - 43678876
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||    
T  43678923 attttttggcagttttggacccccagtccattagtgaggtgccacgtg 43678876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 7802963 - 7802897
Alignment:
Q  111 gttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    ||||| ||||| |||| |||||||||||||||||||||||| ||||| | || ||||| ||||||||    
T  7802963 gttcaggaacagtttgttctaggtcagaagcaacttgttcaggaacagtatgttcaggaacagtttg 7802897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 14256272 - 14256214
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttgggggtttattttttgg 205  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||| |||| ||| ||||    
T  14256272 gttcaggaacaatttgctcagggacggtttgagtttcttgttgggtgtttgtttgttgg 14256214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 13073632 - 13073681
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttgggggttt 196  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||| ||||    
T  13073632 gttcaggaacaatttgctcagggacggtttgagtttcttgttgggtgttt 13073681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 2711796 - 2711839
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||||||||||||||| ||||||||| || ||||||    
T  2711796 tttggcagttttagacccccagtctattagtgaggtgccacgtg 2711839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 7858077 - 7858120
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  7858077 tttggcagttttggacccccagtccattagtgaggtgccacgtg 7858120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 14256324 - 14256277
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| ||||||||| |||||||||| |||||    
T  14256324 tgttcaggaacactttgctcttggtcagaagtaacttgttcaggaaca 14256277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 14319986 - 14319939
Alignment:
Q  112 ttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaat 159  Q
    |||| |||||||||| ||| |||||||||||||||||||| |||||||    
T  14319986 ttcaggaacactttgttcttggtcagaagcaacttgttcaggaacaat 14319939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 15225250 - 15225183
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    |||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||| ||||| ||| ||||    
T  15225250 tgttcaggaacattttgctcttggtcagaagcaactagttcaggaacagtttgttcaggaacactttg 15225183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 21841823 - 21841866
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  21841823 tttggcagttttggacccccagtccattagtgaggtgccacgtg 21841866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 27449012 - 27448969
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  27449012 tttggcagttttggacccccagtccattagtgaggtgccacgtg 27448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 32593990 - 32593943
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||||||| |||| |||||||||||||||| || ||||||    
T  32593990 attttttggcagttttggacctccagtccattagtgaggtgccacgtg 32593943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 1792866 - 1792824
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttg 189  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||    
T  1792866 gttcaggaacaatttgctcagggacggtttgagtttctagttg 1792824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 26012886 - 26012853
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||| |||||||||||||||||||||    
T  26012886 tttggcagttttggacccccagtccattagtgag 26012853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 27719803 - 27719836
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||| |||||||||||||||||||||    
T  27719803 tttggcagttttggacccccagtccattagtgag 27719836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 51336986 - 51337039
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaa 254  Q
    ||||||||||||  |||||||||| ||||||||| || |||||||||| |||||    
T  51336986 tttggcagttttgaacccccagtctattagtgaggtgccacgtggtccactaaa 51337039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 52613540 - 52613507
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||| |||||||||||||||||||||    
T  52613540 tttggcagttttggacccccagtccattagtgag 52613507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 4406186 - 4406238
Alignment:
Q  153 gaacaatttgctcagggacagtttgagtttctggttgggggtttattttttgg 205  Q
    ||||||||||||||||||| ||||||||||||  ||||| |||| ||| ||||    
T  4406186 gaacaatttgctcagggacggtttgagtttcttattgggtgtttgtttgttgg 4406238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 14319930 - 14319878
Alignment:
Q  153 gaacaatttgctcagggacagtttgagtttctggttgggggtttattttttgg 205  Q
    |||||||||||||| |||| ||||||||||| | |||||||||| ||| ||||    
T  14319930 gaacaatttgctcaaggacggtttgagtttcagtttgggggtttgtttgttgg 14319878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 27855764 - 27855678
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| |||||||||| |||||||||| || ||||||| ||||||||||||||||||||||||||| |||||||||    
T  27855764 attttttggcagttttggacccccagttcattagtgaggtgccacgtggccctctaaataatacacgtggcacctcactaatggact 27855678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 42589623 - 42589537
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||    
T  42589623 attttttggcagttttggacccccggtccattagtgaggtgccacgtggtcccctaaataatacacgtggcacctcactaatggact 42589537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 45664361 - 45664275
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  45664361 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 45664275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 52233522 - 52233608
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||| ||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  52233522 attttttggcagttttggactcccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 52233608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 282
Target Start/End: Complemental strand, 26434911 - 26434826
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggac 282  Q
    ||||||||| |||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| ||||||||    
T  26434911 attttttggtagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggac 26434826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 272
Target Start/End: Complemental strand, 43670535 - 43670460
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctc 272  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||    
T  43670535 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctc 43670460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 10279899 - 10279813
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||||||||||  ||| ||| |||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  10279899 attttttggcagttttgaacctccaatccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 10279813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 40815083 - 40815002
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| |||||| |||||||||||||  || ||||||| || ||||||||||||||||||||||||||||| ||||    
T  40815083 tttggcagttttggacccc-agtccattagtgaagtgccacgtggccccctaaataatacacgtggcacctcagtaatagact 40815002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 3384060 - 3384125
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggc 267  Q
    |||||||||||| |||||||||||||||| |||| || ||||||| || |||||||||||| |||||    
T  3384060 tttggcagttttggacccccagtccattaatgaggtgccacgtgg-cccctaaataatacatgtggc 3384125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 18589945 - 18590023
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatg 279  Q
    |||||||||||| ||||| ||||  ||||||||| || ||||||  || |||||||||||| ||||||||||| |||||    
T  18589945 tttggcagttttggaccctcagttaattagtgaggtgccacgtgcccccctaaataatacatgtggcacctcactaatg 18590023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 30289356 - 30289287
Alignment:
Q  209 ttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    |||| |||||||||||||||||||   || ||||||| || |||||||||||| ||||||||||| |||||||    
T  30289356 ttttggacccccagtccattagtg---tgccacgtggccccctaaataatacatgtggcacctcactaatgga 30289287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 26562241 - 26562306
Alignment:
Q  112 ttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    |||| ||||| |||| |||||||||||||||||||||||| ||||| | || ||||| ||||||||    
T  26562241 ttcaggaacagtttgttctaggtcagaagcaacttgttcaggaacagtatgttcaggaacagtttg 26562306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 152742 - 152662
Alignment:
Q  111 gttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctggttggg 191  Q
    ||||| ||||| |||| ||| |||||||||| ||||||||| ||||| |||||| ||| |  ||||||||||||| |||||    
T  152742 gttcaggaacagtttgttcttggtcagaagcgacttgttcaggaacagtttgcttaggaatggtttgagtttctgtttggg 152662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 4169016 - 4169059
Alignment:
Q  134 tcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||    
T  4169016 tcagaagcagcttgttcaagaacagtttgctcaggaacagtttg 4169059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 27855658 - 27855701
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  27855658 tttggcagttttggacccccagtccattagtgaggtgccacgtg 27855701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 52233628 - 52233585
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  52233628 tttggcagttttggacccccagtccattagtgaggtgccacgtg 52233585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 18590051 - 18590014
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  18590051 attttttggcagttttggacccccagttcattagtgag 18590014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 36230701 - 36230668
Alignment:
Q  250 ctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||||||||||| |||||||||    
T  36230701 ctaaataatacacgtggcacctcactaatggact 36230668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 45012728 - 45012761
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||| |||||||||||||||||||||    
T  45012728 tttggcagttttggacccccagtccattagtgag 45012761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 4106960 - 4107045
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggac 282  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||||||| || |||||||||||||||||||||||| ||||||||    
T  4106960 attttttggcagttttggacccccggtccattagtgaggtgtcacgtggccccctaaataatacacgtggcacctcactaatggac 4107045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 20791108 - 20791195
Alignment:
Q  196 tattttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||| | |||||||||    
T  20791108 tattttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcaccttactaatggact 20791195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 5577411 - 5577497
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||  | |||||||||||||||||||||||  |||||||||    
T  5577411 attttttggcagttttggacccccagtccattagtgaggtgccacgtggctccctaaataatacacgtggcacctccctaatggact 5577497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 7653468 - 7653554
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| ||||| ||||||||||||||| || ||||||| || |||||||||||| ||||||||||| |||||||||    
T  7653468 attttttggcagttttggaccctcagtccattagtgaggtgccacgtggccccctaaataatacatgtggcacctcactaatggact 7653554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 41015008 - 41014926
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||| ||||||| |||||||||    
T  41015008 tttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtgacacctcactaatggact 41014926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 40918592 - 40918511
Alignment:
Q  200 ttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    |||||||| |||| ||||||||||||||||||||  || ||||||| || |||||||||||||||||||||||| |||||||    
T  40918592 ttttggcaattttggacccccagtccattagtgatgtgccacgtggccccctaaataatacacgtggcacctcactaatgga 40918511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 41554703 - 41554784
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggac 282  Q
    |||||||||||| |||||| |||||||||||||| || ||||||  || ||||||||||||||| |||||||| ||||||||    
T  41554703 tttggcagttttggacccctagtccattagtgaggtgccacgtgcccccctaaataatacacgtagcacctcactaatggac 41554784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 17943454 - 17943532
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatg 279  Q
    |||||||||||| |||||||||||||||| |||| || ||||||  || |||||||||| ||||||||||||| |||||    
T  17943454 tttggcagttttggacccccagtccattaatgaggtgccacgtgaccccctaaataatatacgtggcacctcactaatg 17943532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 19226734 - 19226800
Alignment:
Q  111 gttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  19226734 gttcaggaacagtttgttctaggtcagaagcaacttgttcaagaacagtttgttcaggaacagtttg 19226800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 30323732 - 30323652
Alignment:
Q  111 gttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctggttggg 191  Q
    ||||| ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||| |  ||||||||||||| |||||    
T  30323732 gttcaggaacagtttgttcttggtcagaagcaacttgttcaggaacagtttgctcaggaatggtttgagtttctgtttggg 30323652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 18155651 - 18155709
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttgggggtttattttttgg 205  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||    
T  18155651 gttcaggaacaatttgctcagggacggtttgagtttctggttgggtgtttgtttgttgg 18155709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 32692828 - 32692898
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacct 271  Q
    ||||||| |||| || ||||||||||||||| || || ||||||| || ||||||||||||||||||||||    
T  32692828 tttggcaattttggatccccagtccattagtaaggtgccacgtggccccctaaataatacacgtggcacct 32692898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 18155599 - 18155646
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  18155599 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 18155646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 41206350 - 41206294
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataa 257  Q
    ||||||||||||  |||||||||||||||||||| || ||||||| || ||||||||    
T  41206350 tttggcagttttgaacccccagtccattagtgaggtgccacgtggccccctaaataa 41206294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 42866310 - 42866266
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtgg 245  Q
    |||||||||||| ||||||||||||||||||||| || |||||||    
T  42866310 tttggcagttttggacccccagtccattagtgaggtgccacgtgg 42866266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 4107066 - 4107023
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||||||||||| ||||||||||||| || ||||||    
T  4107066 tttggcagttttagacccccggtccattagtgaggtgccacgtg 4107023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 41014910 - 41014949
Alignment:
Q  205 gcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  41014910 gcagttttggacccccagtccattagtgaggtgtcacgtg 41014949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 23467841 - 23467776
Alignment:
Q  118 aacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttc 183  Q
    ||||| ||| ||| |||||||||||||||||||| ||||| ||||||  ||||  |||||||||||    
T  23467841 aacacattgttcttggtcagaagcaacttgttcaggaacagtttgctttgggatggtttgagtttc 23467776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 19130519 - 19130559
Alignment:
Q  145 ttgttcaagaacaatttgctcagggacagtttgagtttctg 185  Q
    ||||||| |||||||||||||||| |||||||| |||||||    
T  19130519 ttgttcaggaacaatttgctcaggaacagtttgcgtttctg 19130559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 22391 - 22473
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  22391 tttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 22473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 22493 - 22450
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  22493 tttggcagttttggacccccagtccattagtgaggtgccacgtg 22450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 7e-25; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 43408320 - 43408402
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  43408320 tttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 43408402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 10986201 - 10986117
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    ||||||||||||||||  |||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||    
T  10986201 attttttggcagttttgaacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatgga 10986117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 10356211 - 10356295
Alignment:
Q  199 tttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||||||||  |||||||||||||||||||| || ||||||| || |||||||||||||||||||| ||| |||||||||    
T  10356211 tttttggcagttttgaacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacatcactaatggact 10356295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 19233532 - 19233457
Alignment:
Q  205 gcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    |||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||    
T  19233532 gcagttttggacccccagtccattagtgaggtg-cacgtggccccctaaataatacacgtggcacctcactaatgga 19233457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 10385565 - 10385647
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||| || ||||||||||||||||||||| || ||||||| ||  ||||||| ||||||||||||||| |||||||||    
T  10385565 tttggcagtattggacccccagtccattagtgaggtgccacgtggccccttaaataacacacgtggcacctcactaatggact 10385647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 16705657 - 16705575
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatg 279  Q
    |||||||||||||||| || |||||||||||||||||| || ||||||| || ||||||||||||| ||||| |||| |||||    
T  16705657 attttttggcagttttggatccccagtccattagtgaggtgccacgtggccccctaaataatacacatggcatctcactaatg 16705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 17679893 - 17679811
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatg 279  Q
    |||||||||||||||| || |||||||||||||||||| || ||||||| || ||||||||||||| ||||| |||| |||||    
T  17679893 attttttggcagttttggatccccagtccattagtgaggtgccacgtggccccctaaataatacacatggcatctcactaatg 17679811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 19778370 - 19778452
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| |||| |||||||||||||||| || ||||||  || ||||||||||||||||||| |||| |||||||||    
T  19778370 tttggcagttttggacctccagtccattagtgaggtgccacgtgaccccctaaataatacacgtggcatctcactaatggact 19778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 18798122 - 18798203
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatg 279  Q
    |||||||||||||||| |||||| |||||||||||||| || ||||| | || |||||||||||||||||| ||||| |||||    
T  18798122 attttttggcagttttggacccctagtccattagtgaggtgccacgt-gccccctaaataatacacgtggcccctcactaatg 18798203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 26872562 - 26872497
Alignment:
Q  218 cccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||| ||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  26872562 cccagtccaatagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 26872497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 11275386 - 11275303
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatgga 281  Q
    ||||||||| |||||| ||||| ||||||||||||||| || ||||| | || |||||||||||||||| ||||||| |||||||    
T  11275386 attttttggtagttttggaccctcagtccattagtgaggtgccacgt-gccccctaaataatacacgtgacacctcactaatgga 11275303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 15886784 - 15886717
Alignment:
Q  118 aacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctg 185  Q
    |||| |||| |||||||||||||||||||||||| ||||| |||||||| |||  |||||||||||||    
T  15886784 aacagtttgttctaggtcagaagcaacttgttcaggaacagtttgctcaaggatggtttgagtttctg 15886717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 44189516 - 44189582
Alignment:
Q  217 ccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||| ||||||| || |||||||||| || |||||||||||||| ||||||||| |||||||||    
T  44189516 ccccagttcattagtaaggtgtcacgtggccccctaaataatacacgcggcacctcactaatggact 44189582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 40436197 - 40436140
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaa 254  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||| || |||||    
T  40436197 attttttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaa 40436140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 10385671 - 10385624
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||    
T  10385671 attttttggcagttttggacccccagtccattagtgaggtgccacgtg 10385624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 19778472 - 19778429
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| |||||||||||||||||||||||| ||||||    
T  19778472 tttggcagttttggacccccagtccattagtgagatgccacgtg 19778429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 43408426 - 43408379
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||    
T  43408426 attttttggcagttttggacccccagtccattagtgaggtgccacgtg 43408379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 18798231 - 18798194
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgag 234  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  18798231 attttttggcagttttagacccccagttcattagtgag 18798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 26872473 - 26872520
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    ||||||||||||||||  |||||||||||||||||||| || ||||||    
T  26872473 attttttggcagttttgaacccccagtccattagtgaggtgccacgtg 26872520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 25213825 - 25213779
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttggggg 193  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||||||    
T  25213825 gttcaggaacaatttgctcagggacggtttgagtttcagtttggggg 25213779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 10356315 - 10356283
Alignment:
Q  201 tttggcagttttagacccccagtccattagtga 233  Q
    |||||||||||| ||||||||||||||||||||    
T  10356315 tttggcagttttggacccccagtccattagtga 10356283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 16705548 - 16705587
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatg 237  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  16705548 attttttggcagttttggacccccagt-cattagtgagatg 16705587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 17679784 - 17679823
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatg 237  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  17679784 attttttggcagttttggacccccagt-cattagtgagatg 17679823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 49081533 - 49081469
Alignment:
Q  219 ccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||| |||||| |||||  ||| || |||||||||||| ||||||||||| |||| ||||    
T  49081533 ccagtccataagtgaggtgtcatatggccccctaaataatacatgtggcacctcactaatagact 49081469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 43585901 - 43585982
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggac 282  Q
    |||||||||||| ||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||| ||||||||    
T  43585901 tttggcagttttggacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggac 43585982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 39085 - 39167
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| |||||| |||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  39085 tttggcagttttggaccccaagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 39167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 5891702 - 5891616
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||| |||||||  |||||||||||||||||||| || ||||||| || |||||||||||||||||||| ||| |||||||||    
T  5891702 attttttgacagttttgaacccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacatcactaatggact 5891616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 26036331 - 26036413
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||| ||||||||||| |||||||||||||| || ||||||| || |||||||||||||||| ||||||| |||||||||    
T  26036331 tttggcaattttagacccctagtccattagtgaggtgccacgtggccccctaaataatacacgtgacacctcactaatggact 26036413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 32555860 - 32555942
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||| ||||||||||||||||| || ||||||| || ||||||||||||||| |||||||| |||||||||    
T  32555860 tttggcagttttggactcccagtccattagtgaggtgccacgtggccccctaaataatacacgtagcacctcactaatggact 32555942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 41032407 - 41032326
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatg 279  Q
    |||||||||||||||| |||||| |||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||    
T  41032407 attttttggcagttttggacccc-agtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatg 41032326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 3728380 - 3728461
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| ||||||||||| ||||||||| || ||||||| || ||||||||||||||||||| |||| |||||||||    
T  3728380 tttggcagttttggacccccagtcaattagtgaggtgccacgtggccccctaaataatacacgtggca-ctcactaatggact 3728461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 9072166 - 9072085
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggac 282  Q
    |||||||||||| |||| |||||||||| ||| | || ||||||| || |||||||||||||||||||||||| ||||||||    
T  9072166 tttggcagttttggacctccagtccattcgtggggtgccacgtggccccctaaataatacacgtggcacctcactaatggac 9072085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 28251595 - 28251514
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| |||||| |||||||||| ||| || ||| ||| |||||| |||||||||||||||||||| |||||||||    
T  28251595 tttggcagttttggacccc-agtccattagggaggtgccacatggccctctagataatacacgtggcacctcactaatggact 28251514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 9560033 - 9559970
Alignment:
Q  220 cagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||||||||| || ||||||| || |||||||||||||||||||||||| | |||||||    
T  9560033 cagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcacttatggact 9559970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 16079395 - 16079352
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  16079395 tttggcagttttggacccccagtccattagtgaggtgtcacgtg 16079352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 17448440 - 17448487
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  17448440 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 17448487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 26036433 - 26036390
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  26036433 tttggcagttttggacccccagtccattagtgaggtgtcacgtg 26036390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 34061102 - 34061055
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  34061102 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 34061055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 1113014 - 1113088
Alignment:
Q  111 gttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctg 185  Q
    ||||| ||||| |||| ||| |||||||||| ||||||||| ||||| |||||||||| |  |||||||||||||    
T  1113014 gttcaggaacagtttgttcttggtcagaagcgacttgttcaggaacagtttgctcaggaatggtttgagtttctg 1113088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 17448492 - 17448550
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttgggggtttattttttgg 205  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||| |||| ||| ||||    
T  17448492 gttcaggaacaatttgctcagggacggtttgagtttcttgttgggtgtttgtttgttgg 17448550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 23404939 - 23404866
Alignment:
Q  118 aacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctggttggg 191  Q
    ||||| ||| ||| |||||||||||||||||||| ||||| ||||||  ||||  ||||||||||||| |||||    
T  23404939 aacacattgttcttggtcagaagcaacttgttcaggaacagtttgctttgggatggtttgagtttctgtttggg 23404866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 35818419 - 35818376
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||    
T  35818419 tttgacagttttagacccccggtccattagtgagatgccacgtg 35818376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 34061050 - 34060992
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttctggttgggggtttattttttgg 205  Q
    ||||| |||||||||| |||||||| |||||||||||| |||||| |||| ||| ||||    
T  34061050 gttcaggaacaatttgttcagggacggtttgagtttcttgttgggtgtttgtttgttgg 34060992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 20465652 - 20465619
Alignment:
Q  250 ctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||||||||||| |||||||||    
T  20465652 ctaaataatacacgtggcacctcactaatggact 20465619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 32555962 - 32555929
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||| |||||||||||||||||||||    
T  32555962 tttggcagttttggacccccagtccattagtgag 32555929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 5891596 - 5891628
Alignment:
Q  201 tttggcagttttagacccccagtccattagtga 233  Q
    |||||||||||| ||||||||||||||||||||    
T  5891596 tttggcagttttggacccccagtccattagtga 5891628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1067 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold1067
Description:

Target: scaffold1067; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 1447 - 1533
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||| || |||| |||||| |||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  1447 attttttgacatttttggacccctagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 1533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1067; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 1557 - 1510
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||    
T  1557 attttttggcagttttggacccccagtccattagtgaggtgccacgtg 1510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 15975 - 15890
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||||||| |||||| |||||||||||||| || ||||||| || |||||||||||||||||||||||| |||| ||||    
T  15975 attttttggcagttttggacccc-agtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatagact 15890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 15866 - 15913
Alignment:
Q  197 attttttggcagttttagacccccagtccattagtgagatgtcacgtg 244  Q
    |||||||||||||||| ||||||||||| ||||||||| || ||||||    
T  15866 attttttggcagttttggacccccagtctattagtgaggtgccacgtg 15913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 26464 - 26380
Alignment:
Q  201 tttggcagttttagaccccc--agtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    |||||||||||| |||||||  |||||||||||||| || ||||||| || |||||||||||||||||||||||| |||||||||    
T  26464 tttggcagttttggacccccccagtccattagtgaggtgccacgtggccccctaaataatacacgtggcacctcactaatggact 26380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 21264 - 21182
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgagatgtcacgtggtcctctaaataatacacgtggcacctcagtaatggact 283  Q
    ||||||||||||  ||||| |||||||||||||| || ||||||| || ||||||||||||| |||||||||| |||||||||    
T  21264 tttggcagttttgaaccccgagtccattagtgaggtgccacgtggccccctaaataatacacttggcacctcactaatggact 21182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 21162 - 21195
Alignment:
Q  201 tttggcagttttagacccccagtccattagtgag 234  Q
    |||||||||||| |||||||||||||||||||||    
T  21162 tttggcagttttggacccccagtccattagtgag 21195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 177283 - 177374
Alignment:
Q  99 cagaaacaacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctggttgg 190  Q
    |||| ||||| |||||| |||||||||||||| |||||||||||||||||||| ||||| ||| || |||||| |||   ||||||||||||    
T  177283 cagagacaacttgttcaggaacactttgctcttggtcagaagcaacttgttcaggaacagttttcttagggacggttgacgtttctggttgg 177374  T

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Target: scaffold0474 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 139 - 59
Alignment:
Q  111 gttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttgagtttctggttggg 191  Q
    ||||| ||||| |||| ||| |||||||||||||||||||| ||||| ||||||| ||||  ||||||||||||| |||||    
T  139 gttcaggaacagtttgttcttggtcagaagcaacttgttcaggaacagtttgctcggggatggtttgagtttctgtttggg 59  T

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Target: scaffold0411 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 1462 - 1415
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  1462 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 1415  T

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Target: scaffold0411; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 5493 - 5446
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  5493 tgttcaggaacactttgctcttggtcagaagcaacttgttcaggaaca 5446  T

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Target: scaffold0411; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 1410 - 1374
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttc 183  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  1410 gttcaggaacaatttgctcagggacggtttgagtttc 1374  T

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Target: scaffold0411; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 5441 - 5405
Alignment:
Q  147 gttcaagaacaatttgctcagggacagtttgagtttc 183  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  5441 gttcaggaacaatttgctcagggacggtttgagtttc 5405  T

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Target: scaffold0398 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 2776 - 2727
Alignment:
Q  128 tctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    ||||||||||||||||| |||||| |||||||||| ||||| ||||||||    
T  2776 tctaggtcagaagcaacctgttcaggaacaatttgttcaggaacagtttg 2727  T

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Target: scaffold0398; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 11031 - 10982
Alignment:
Q  128 tctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    ||||||||||||||||| |||||| |||||||||| ||||| ||||||||    
T  11031 tctaggtcagaagcaacctgttcaggaacaatttgttcaggaacagtttg 10982  T

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Target: scaffold0195 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 31653 - 31705
Alignment:
Q  105 caacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||| |||||| ||||| |||||||| |||||||||||||||||||| |||||    
T  31653 caacctgttcaggaacattttgctcttggtcagaagcaacttgttcaggaaca 31705  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 212410 - 212470
Alignment:
Q  105 caacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctc 165  Q
    |||| |||||| ||||| |||||||| |||||||| ||||||||||| ||||| |||||||    
T  212410 caacttgttcaggaacattttgctcttggtcagaaacaacttgttcaggaacactttgctc 212470  T

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Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 218279 - 218339
Alignment:
Q  105 caacgtgttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctc 165  Q
    |||| |||||| ||||| |||||||| |||||||| ||||||||||| ||||| |||||||    
T  218279 caacttgttcaggaacattttgctcttggtcagaaacaacttgttcaggaacactttgctc 218339  T

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Target: scaffold0201 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 252 - 299
Alignment:
Q  110 tgttcatgaacactttgctctaggtcagaagcaacttgttcaagaaca 157  Q
    |||||| ||||||| |||||| |||||||||||||||||||| |||||    
T  252 tgttcaggaacactctgctcttggtcagaagcaacttgttcaggaaca 299  T

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Target: scaffold0251 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 24359 - 24425
Alignment:
Q  111 gttcatgaacactttgctctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    ||||| ||||| |||| ||| ||||||||| |||||||||||||||| |||| | ||| ||||||||    
T  24359 gttcaggaacagtttgttcttggtcagaagaaacttgttcaagaacagtttgtttaggaacagtttg 24425  T

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Target: scaffold2119 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2119
Description:

Target: scaffold2119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 775 - 726
Alignment:
Q  128 tctaggtcagaagcaacttgttcaagaacaatttgctcagggacagtttg 177  Q
    ||||||||||||||||| |||||| ||||| |||| ||||| ||||||||    
T  775 tctaggtcagaagcaacctgttcaggaacagtttgttcaggaacagtttg 726  T

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