View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12189_high_6 (Length: 289)

Name: NF12189_high_6
Description: NF12189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12189_high_6
NF12189_high_6
[»] chr3 (3 HSPs)
chr3 (1-209)||(8175623-8175840)
chr3 (1-44)||(4045649-4045692)
chr3 (1-46)||(49429495-49429540)
[»] chr6 (5 HSPs)
chr6 (62-209)||(22258266-22258414)
chr6 (1-44)||(22730717-22730760)
chr6 (6-44)||(607027-607065)
chr6 (1-37)||(5641705-5641741)
chr6 (11-43)||(30255170-30255202)
[»] chr8 (8 HSPs)
chr8 (62-134)||(30794382-30794454)
chr8 (1-44)||(1588804-1588847)
chr8 (1-44)||(7314770-7314813)
chr8 (1-44)||(14684231-14684274)
chr8 (1-46)||(17855684-17855729)
chr8 (3-39)||(9737377-9737413)
chr8 (76-132)||(14051245-14051301)
chr8 (152-180)||(30794336-30794364)
[»] chr1 (8 HSPs)
chr1 (1-44)||(4354120-4354163)
chr1 (1-44)||(13941356-13941399)
chr1 (1-44)||(39238753-39238796)
chr1 (1-44)||(39433395-39433438)
chr1 (1-42)||(23368747-23368788)
chr1 (2-39)||(40679827-40679864)
chr1 (1-42)||(50065049-50065090)
chr1 (1-29)||(49606713-49606741)
[»] chr4 (7 HSPs)
chr4 (1-42)||(22096406-22096447)
chr4 (1-44)||(11863168-11863211)
chr4 (1-44)||(21765424-21765467)
chr4 (1-44)||(35747497-35747540)
chr4 (1-44)||(52330924-52330967)
chr4 (1-46)||(36257729-36257774)
chr4 (4-44)||(56531254-56531294)
[»] chr2 (5 HSPs)
chr2 (1-46)||(1962861-1962906)
chr2 (1-44)||(3364762-3364805)
chr2 (1-44)||(18255658-18255701)
chr2 (1-44)||(33482657-33482700)
chr2 (1-44)||(36665467-36665510)
[»] chr7 (3 HSPs)
chr7 (1-44)||(36315989-36316032)
chr7 (1-30)||(15716672-15716701)
chr7 (1-42)||(27454050-27454091)
[»] chr5 (4 HSPs)
chr5 (1-44)||(6447495-6447538)
chr5 (1-44)||(6614053-6614096)
chr5 (1-30)||(5039731-5039760)
chr5 (1-37)||(35168647-35168683)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 8175840 - 8175623
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcatacagggacgttttcacctcccggccaccc---------gcccgggctcaatcggtac 91  Q
    |||||||||||||||| || ||||||||||||| |||||||||||| |||||||||||||||||||||||||         ||| |||||||||||||||    
T  8175840 tgaataagtggggtgttcggagttcgaacctcgatccctgcatacatggacgttttcacctcccggccaccccgggcacccgcctgggctcaatcggtac 8175741  T
Q  92 ttgctttatagttgacccaacccaatatcccattaagccacctnnnnnnnnnnnnnnttgggcaaactcatattattcacacacgcgcagagcagaaaac 191  Q
    |||||||||||||||||||||||||||||||||||| ||||||              |||| ||||||||||||||||||||||||||| ||||||||||    
T  8175740 ttgctttatagttgacccaacccaatatcccattaaaccacctaaaaaaacaaaaaattggacaaactcatattattcacacacgcgcaaagcagaaaac 8175641  T
Q  192 agaaacaacgctctctgc 209  Q
    ||||||||||||||||||    
T  8175640 agaaacaacgctctctgc 8175623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4045649 - 4045692
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  4045649 tgaataagtggggtgtccgaagttcgaacctcgacccctgcata 4045692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49429540 - 49429495
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcataca 46  Q
    |||||||||||||||||||  |||||||||  ||||||||||||||    
T  49429540 tgaataagtggggtgtccggggttcgaaccctggtccctgcataca 49429495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 22258414 - 22258266
Alignment:
Q  62 cccggccacccgcccgggctcaatcggtacttgctttatagttgacccaacccaatatcccattaagccacct-nnnnnnnnnnnnnnttgggcaaactc 160  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||               ||||||||||||    
T  22258414 cccgggcacccgcccgggctcaatcggtacttgctttatagttgatccaacccaatagcccattaagccacctaaaaaaaacaaaaaattgggcaaactc 22258315  T
Q  161 atattattcacacacgcgcagagcagaaaacagaaacaacgctctctgc 209  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22258314 atattattcacacacgcgcaaagcagaaaacagaaacaacgctctctgc 22258266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22730717 - 22730760
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| |||||||| || |||||||||||    
T  22730717 tgaataagtggggtgtccgaggttcgaacttcagtccctgcata 22730760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 607065 - 607027
Alignment:
Q  6 aagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  607065 aagtggggtgttcggagttcgaacctcggtccctgcata 607027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5641705 - 5641741
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtcc 37  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  5641705 tgaataagtggggtgtccggagttcgaaccccggtcc 5641741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 30255202 - 30255170
Alignment:
Q  11 gggtgtccgaagttcgaacctcggtccctgcat 43  Q
    ||||||||||||||||||| |||||||||||||    
T  30255202 gggtgtccgaagttcgaacttcggtccctgcat 30255170  T

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Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 30794454 - 30794382
Alignment:
Q  62 cccggccacccgcccgggctcaatcggtacttgctttatagttgacccaacccaatatcccattaagccacct 134  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  30794454 cccgggcacccgcccgggctcaatcggtaattgctttatagttgacccaacccaatagcccattaagccacct 30794382  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1588847 - 1588804
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||    
T  1588847 tgaataagtggggtgtccgaggttcgaaccccggcccctgcata 1588804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7314813 - 7314770
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||  ||||||||||||| |||||||||    
T  7314813 tgaataagtggggtgtccggggttcgaacctcggcccctgcata 7314770  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14684231 - 14684274
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||    
T  14684231 tgaataagtggggtgtccgaagttcgaaccccggcccctacata 14684274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17855729 - 17855684
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcataca 46  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||    
T  17855729 tgaataagtggggtgtccggggttcgaaccccggcccctgcataca 17855684  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 9737377 - 9737413
Alignment:
Q  3 aataagtggggtgtccgaagttcgaacctcggtccct 39  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  9737377 aataagtggggtgtccggagttcgaacctcggcccct 9737413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 14051245 - 14051301
Alignment:
Q  76 cgggctcaatcggtacttgctttatagttgacccaacccaatatcccattaagccac 132  Q
    ||||||||||| ||| || ||||||| ||| ||||||| |||| |||||||||||||    
T  14051245 cgggctcaatcagtattttctttatatttggcccaacctaatagcccattaagccac 14051301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 180
Target Start/End: Complemental strand, 30794364 - 30794336
Alignment:
Q  152 ggcaaactcatattattcacacacgcgca 180  Q
    |||||||||||||||||||||||||||||    
T  30794364 ggcaaactcatattattcacacacgcgca 30794336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4354120 - 4354163
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||||||||||||| ||| |||||||||    
T  4354120 tgaataagtggggtgtccgaagttcgaaccccggcccctgcata 4354163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13941399 - 13941356
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  13941399 tgaataagtggggtgtccgaagttcgaacctcgaaccctgcata 13941356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39238796 - 39238753
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||  ||||||||||||| |||||||||    
T  39238796 tgaataagtggggtgtccggggttcgaacctcggcccctgcata 39238753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39433438 - 39433395
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| |||||||| |||| |||||||||    
T  39433438 tgaataagtggggtgtccgaggttcgaacatcggcccctgcata 39433395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23368747 - 23368788
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgca 42  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  23368747 tgaataagtggggtgtccggggttcgaacatcggtccctgca 23368788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 40679864 - 40679827
Alignment:
Q  2 gaataagtggggtgtccgaagttcgaacctcggtccct 39  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  40679864 gaataagtggggtgtccgaagttcgaaccccggcccct 40679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50065090 - 50065049
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgca 42  Q
    ||||||||||||||||||||  |||||||| |||||||||||    
T  50065090 tgaataagtggggtgtccgagattcgaaccccggtccctgca 50065049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 49606713 - 49606741
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaac 29  Q
    |||||||||||||||||||||||||||||    
T  49606713 tgaataagtggggtgtccgaagttcgaac 49606741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22096406 - 22096447
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgca 42  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  22096406 tgaataagtggggtgtccggagttcgaacctcggcccctgca 22096447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11863168 - 11863211
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||    
T  11863168 tgaataagtagggtgtctgaagttcgaacctcagtccctgcata 11863211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21765424 - 21765467
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| |||||||||| || |||||||||    
T  21765424 tgaataagtggggtgtccgaggttcgaaccttggcccctgcata 21765467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35747497 - 35747540
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    ||||||||||||||||||| |||||||||||||  |||||||||    
T  35747497 tgaataagtggggtgtccggagttcgaacctcgacccctgcata 35747540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52330924 - 52330967
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||    
T  52330924 tgaataagtggggtgtccggagttcgaaccccggcccctgcata 52330967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36257774 - 36257729
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcataca 46  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||    
T  36257774 tgaataagtggggtgtccggggttcgaaccccggcccctgcataca 36257729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 56531254 - 56531294
Alignment:
Q  4 ataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||| |||||||||| ||| |||||||||    
T  56531254 ataagtggggtgtccggagttcgaaccccggcccctgcata 56531294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1962906 - 1962861
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcataca 46  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||    
T  1962906 tgaataagtggggtgtccggagttcgaacctcgacccctgcataca 1962861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3364805 - 3364762
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  3364805 tgaataagtggggtgtctaaagttcgaacctcggcccctgcata 3364762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18255701 - 18255658
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| ||||||| ||||| |||||||||    
T  18255701 tgaataagtggggtgtccgaggttcgaaactcggcccctgcata 18255658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33482657 - 33482700
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    ||||||||||||||||| || ||||||||| |||||||||||||    
T  33482657 tgaataagtggggtgtctgaggttcgaaccacggtccctgcata 33482700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36665510 - 36665467
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||    
T  36665510 tgaataagtggggtgtccgaggttcgaaccccggcccctgcata 36665467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36315989 - 36316032
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||    
T  36315989 tgaataagtggggtgtccgaggttcgaaccccggcccctgcata 36316032  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 15716672 - 15716701
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacc 30  Q
    ||||||||||||||||||||||||||||||    
T  15716672 tgaataagtggggtgtccgaagttcgaacc 15716701  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27454091 - 27454050
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgca 42  Q
    |||||||||||||||||||| ||||||||||||  |||||||    
T  27454091 tgaataagtggggtgtccgaggttcgaacctcgacccctgca 27454050  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6447495 - 6447538
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||    
T  6447495 tgaataagtggggtgtccgaggttcgaaccccggcccctgcata 6447538  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6614053 - 6614096
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtccctgcata 44  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||    
T  6614053 tgaataagtggggtgtccgaggttcgaaccccggcccctgcata 6614096  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 5039760 - 5039731
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacc 30  Q
    ||||||||||||||||||||||||||||||    
T  5039760 tgaataagtggggtgtccgaagttcgaacc 5039731  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35168647 - 35168683
Alignment:
Q  1 tgaataagtggggtgtccgaagttcgaacctcggtcc 37  Q
    |||||||||||||||||||  ||||||||||||||||    
T  35168647 tgaataagtggggtgtccggggttcgaacctcggtcc 35168683  T

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