View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12192_low_2 (Length: 507)
Name: NF12192_low_2
Description: NF12192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12192_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 25 - 493
Target Start/End: Complemental strand, 9424835 - 9424367
Alignment:
| Q |
25 |
gattcatctggtccgcacacagtttcaagtgcatgtgattgaagacaataaactagcgttatccatgccataccaatttaattagtagacttaattgcat |
124 |
Q |
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| T |
9424835 |
gattcatctggtccgcacacagtttcaagtgcatgtgattgaagacaataaactagcgttatccatgccataccaatttaattagtagacttaattgcat |
9424736 |
T |
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| Q |
125 |
gtttgatccctttacttttaattagttaactatctctcaaaatgttggcaccccagtttatcaataacccaattttagtccatgtgaatttccagctaat |
224 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
9424735 |
gtttgatccctttacttttaattagttacctatctctcaaaatgttggcaccccagtttatcaataacgcaattttagtccatgtgaatttccagctaat |
9424636 |
T |
|
| Q |
225 |
agttagcagagatgttgacctgacctggctgttataacaatgcagaattgaagtccattattagatacaaatgtctttttcaattctttgtttcagcgat |
324 |
Q |
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| T |
9424635 |
agttagcagagatgttgacctgacctggctgttataacaatgcagaattgaagtccattattagatacaaatgtctttttcaattctttgtttcagcgat |
9424536 |
T |
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| Q |
325 |
ctatgaatctctccataataatatgttgtcccttaattgtagattgtcaaaaaagcttgtagtttctgatttttacttttctttctatttttgcagagac |
424 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
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| T |
9424535 |
ctatgaatctctccataataatatgttgtcccttaattatagattgtcaaaaaagcttgcagtttctgacttttacttttctttctatttttgcagagac |
9424436 |
T |
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| Q |
425 |
ttgaaaagaatccgagctttgaaacgtcaatgagagagtctgttggggttgtacgtaccgaagagcaca |
493 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
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| T |
9424435 |
ttgaaaagaatccgagctttgaaacgtcaatgagagaatctgttggggttgtacctaccgaagagcaca |
9424367 |
T |
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