View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12194_high_13 (Length: 467)

Name: NF12194_high_13
Description: NF12194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12194_high_13
NF12194_high_13
[»] chr2 (52 HSPs)
chr2 (10-449)||(12289688-12290126)
chr2 (22-445)||(12194847-12195269)
chr2 (266-340)||(26202028-26202102)
chr2 (270-407)||(32592521-32592656)
chr2 (257-405)||(43279517-43279661)
chr2 (279-406)||(41241141-41241267)
chr2 (265-347)||(20952348-20952430)
chr2 (221-362)||(39659461-39659600)
chr2 (266-362)||(15757654-15757750)
chr2 (266-378)||(39073685-39073796)
chr2 (74-180)||(12195300-12195406)
chr2 (266-395)||(45229458-45229585)
chr2 (221-317)||(15305697-15305792)
chr2 (128-178)||(12290148-12290198)
chr2 (265-319)||(20926524-20926578)
chr2 (237-339)||(40279408-40279508)
chr2 (266-362)||(1625879-1625974)
chr2 (265-360)||(11201376-11201471)
chr2 (266-362)||(41851514-41851609)
chr2 (277-404)||(12464480-12464606)
chr2 (222-340)||(24100927-24101045)
chr2 (222-316)||(3611250-3611343)
chr2 (257-347)||(5745773-5745862)
chr2 (277-407)||(41407235-41407365)
chr2 (277-362)||(40279176-40279260)
chr2 (309-361)||(36285435-36285486)
chr2 (221-313)||(40682347-40682438)
chr2 (225-301)||(41812048-41812123)
chr2 (283-330)||(42868479-42868526)
chr2 (277-362)||(10490608-10490693)
chr2 (277-339)||(40279268-40279330)
chr2 (277-339)||(40279338-40279400)
chr2 (221-378)||(2416276-2416431)
chr2 (277-318)||(23956039-23956080)
chr2 (298-347)||(28206260-28206309)
chr2 (232-316)||(33319777-33319858)
chr2 (272-317)||(36125384-36125429)
chr2 (244-316)||(29316751-29316821)
chr2 (266-333)||(42420219-42420286)
chr2 (288-354)||(7483883-7483950)
chr2 (232-319)||(11863922-11864008)
chr2 (257-340)||(18066128-18066210)
chr2 (277-360)||(33941890-33941972)
chr2 (277-316)||(33981146-33981185)
chr2 (280-362)||(1810644-1810724)
chr2 (281-331)||(16398123-16398173)
chr2 (295-353)||(27695620-27695678)
chr2 (296-345)||(30331755-30331804)
chr2 (221-346)||(31561694-31561818)
chr2 (277-314)||(43511111-43511148)
chr2 (287-319)||(1633509-1633541)
chr2 (271-319)||(40835549-40835597)
[»] chr1 (58 HSPs)
chr1 (222-354)||(49938733-49938864)
chr1 (266-353)||(42174842-42174929)
chr1 (244-362)||(17603359-17603475)
chr1 (271-362)||(473143-473233)
chr1 (224-362)||(3233970-3234106)
chr1 (272-359)||(1510312-1510398)
chr1 (266-362)||(41184646-41184741)
chr1 (257-338)||(51929527-51929607)
chr1 (266-362)||(24915047-24915142)
chr1 (222-363)||(27970247-27970387)
chr1 (222-331)||(2295105-2295213)
chr1 (257-362)||(14576642-14576744)
chr1 (278-358)||(1509734-1509813)
chr1 (286-362)||(6556950-6557025)
chr1 (269-361)||(37631558-37631649)
chr1 (266-353)||(36872719-36872805)
chr1 (222-312)||(29904779-29904868)
chr1 (265-354)||(36872574-36872663)
chr1 (280-345)||(43230780-43230845)
chr1 (272-348)||(5709619-5709694)
chr1 (232-316)||(41195157-41195239)
chr1 (291-350)||(5709559-5709618)
chr1 (277-404)||(47432033-47432158)
chr1 (257-327)||(15477578-15477647)
chr1 (280-362)||(30581781-30581861)
chr1 (239-325)||(37473418-37473503)
chr1 (286-339)||(43990255-43990309)
chr1 (277-362)||(36872248-36872328)
chr1 (257-340)||(30286507-30286589)
chr1 (279-342)||(35179137-35179200)
chr1 (222-309)||(37517119-37517205)
chr1 (274-340)||(7137002-7137068)
chr1 (288-406)||(45661131-45661244)
chr1 (275-340)||(2777892-2777957)
chr1 (277-342)||(5887001-5887066)
chr1 (265-362)||(13809977-13810073)
chr1 (279-340)||(26779934-26779995)
chr1 (272-353)||(33546455-33546536)
chr1 (267-340)||(38503462-38503535)
chr1 (265-330)||(40977398-40977463)
chr1 (266-314)||(3887628-3887676)
chr1 (279-449)||(18556818-18556986)
chr1 (277-333)||(27820344-27820400)
chr1 (306-362)||(41505665-41505720)
chr1 (277-353)||(51695502-51695578)
chr1 (277-340)||(7218081-7218144)
chr1 (268-311)||(17830179-17830222)
chr1 (274-340)||(28482237-28482303)
chr1 (289-347)||(31303629-31303686)
chr1 (274-340)||(34290236-34290302)
chr1 (275-333)||(45975697-45975755)
chr1 (257-314)||(7941632-7941688)
chr1 (279-364)||(11893175-11893259)
chr1 (266-318)||(341469-341521)
chr1 (288-340)||(10809345-10809397)
chr1 (288-340)||(14443449-14443501)
chr1 (296-348)||(34795451-34795503)
chr1 (277-313)||(38882919-38882955)
[»] chr4 (53 HSPs)
chr4 (222-347)||(54426036-54426160)
chr4 (184-379)||(2244010-2244202)
chr4 (224-407)||(50681044-50681225)
chr4 (223-338)||(39603124-39603238)
chr4 (257-408)||(55414408-55414557)
chr4 (266-347)||(46592205-46592287)
chr4 (264-353)||(33586949-33587038)
chr4 (221-353)||(21731608-21731739)
chr4 (266-360)||(7839357-7839450)
chr4 (266-347)||(46588069-46588151)
chr4 (268-348)||(50662736-50662816)
chr4 (271-407)||(54069418-54069553)
chr4 (221-362)||(29388593-29388732)
chr4 (257-347)||(17822853-17822942)
chr4 (277-402)||(20108948-20109072)
chr4 (221-313)||(13126528-13126619)
chr4 (281-360)||(39691154-39691231)
chr4 (222-353)||(22030190-22030320)
chr4 (181-316)||(24169287-24169417)
chr4 (279-360)||(2996554-2996634)
chr4 (257-362)||(41336739-41336842)
chr4 (277-362)||(53294121-53294205)
chr4 (266-334)||(44862980-44863048)
chr4 (280-339)||(40831040-40831098)
chr4 (234-362)||(55064812-55064940)
chr4 (266-328)||(1374572-1374634)
chr4 (296-346)||(9760434-9760484)
chr4 (277-395)||(17884014-17884131)
chr4 (277-362)||(18425791-18425875)
chr4 (221-316)||(25904175-25904269)
chr4 (266-316)||(55302273-55302323)
chr4 (223-312)||(25332803-25332891)
chr4 (240-353)||(35571602-35571714)
chr4 (266-395)||(52315193-52315321)
chr4 (279-347)||(11264294-11264362)
chr4 (266-353)||(11347765-11347853)
chr4 (278-345)||(36243418-36243483)
chr4 (266-334)||(44138565-44138633)
chr4 (280-340)||(52259631-52259691)
chr4 (277-317)||(56249547-56249587)
chr4 (272-407)||(15177204-15177338)
chr4 (222-349)||(49202636-49202762)
chr4 (257-331)||(26853-26925)
chr4 (309-407)||(31076425-31076522)
chr4 (277-334)||(43505940-43505998)
chr4 (288-362)||(54392837-54392910)
chr4 (282-343)||(437256-437317)
chr4 (280-353)||(16199991-16200064)
chr4 (279-340)||(19250546-19250607)
chr4 (265-313)||(28614804-28614851)
chr4 (290-318)||(39011148-39011176)
chr4 (277-345)||(41512646-41512714)
chr4 (288-340)||(56007679-56007731)
[»] chr8 (41 HSPs)
chr8 (222-362)||(26771244-26771382)
chr8 (221-379)||(35534565-35534719)
chr8 (265-378)||(16736047-16736159)
chr8 (221-348)||(30251406-30251532)
chr8 (222-345)||(36963307-36963428)
chr8 (221-346)||(28763362-28763486)
chr8 (265-319)||(35643983-35644037)
chr8 (266-362)||(9130302-9130398)
chr8 (266-362)||(16825534-16825628)
chr8 (223-362)||(18133635-18133772)
chr8 (257-362)||(10758245-10758347)
chr8 (277-354)||(11861790-11861867)
chr8 (286-407)||(15180475-15180595)
chr8 (257-378)||(37945560-37945678)
chr8 (222-362)||(27028810-27028948)
chr8 (299-391)||(29168921-29169012)
chr8 (221-381)||(38648311-38648469)
chr8 (271-319)||(43045726-43045774)
chr8 (217-388)||(29205761-29205929)
chr8 (292-347)||(29818936-29818991)
chr8 (296-345)||(30657798-30657847)
chr8 (220-316)||(1058028-1058122)
chr8 (295-407)||(42043370-42043481)
chr8 (268-407)||(25930552-25930690)
chr8 (221-341)||(1930034-1930153)
chr8 (271-347)||(12976206-12976281)
chr8 (286-378)||(13814712-13814803)
chr8 (266-310)||(13822048-13822092)
chr8 (280-340)||(43504751-43504811)
chr8 (288-347)||(9956832-9956891)
chr8 (278-353)||(10114476-10114551)
chr8 (237-316)||(31716195-31716273)
chr8 (277-340)||(41595981-41596044)
chr8 (265-335)||(6525822-6525892)
chr8 (257-319)||(10120777-10120838)
chr8 (271-333)||(11407349-11407411)
chr8 (280-314)||(42893500-42893534)
chr8 (282-379)||(38602295-38602391)
chr8 (277-317)||(6525627-6525667)
chr8 (277-333)||(20672757-20672813)
chr8 (266-310)||(32975615-32975659)
[»] chr5 (35 HSPs)
chr5 (222-378)||(16937836-16937990)
chr5 (225-407)||(16457935-16458114)
chr5 (225-407)||(29925775-29925955)
chr5 (221-395)||(10639899-10640071)
chr5 (266-407)||(25461643-25461782)
chr5 (232-341)||(3735121-3735229)
chr5 (229-358)||(25461074-25461201)
chr5 (257-337)||(37954689-37954768)
chr5 (269-348)||(32009684-32009764)
chr5 (277-362)||(13697766-13697850)
chr5 (286-407)||(36227729-36227848)
chr5 (266-330)||(12857701-12857765)
chr5 (282-362)||(24030413-24030493)
chr5 (221-315)||(3932628-3932721)
chr5 (221-331)||(9107099-9107208)
chr5 (286-359)||(27298056-27298127)
chr5 (246-315)||(35446080-35446148)
chr5 (270-319)||(42500242-42500290)
chr5 (266-330)||(12857334-12857398)
chr5 (294-362)||(34102338-34102405)
chr5 (277-339)||(4014431-4014493)
chr5 (280-354)||(43300864-43300938)
chr5 (257-362)||(2568636-2568739)
chr5 (273-354)||(7907867-7907948)
chr5 (266-339)||(9202744-9202817)
chr5 (257-362)||(39105443-39105546)
chr5 (277-353)||(6587114-6587190)
chr5 (281-357)||(36318757-36318833)
chr5 (239-315)||(36797065-36797141)
chr5 (265-332)||(706471-706538)
chr5 (277-340)||(42582912-42582975)
chr5 (288-362)||(12425550-12425623)
chr5 (288-353)||(10272449-10272514)
chr5 (279-340)||(15074758-15074819)
chr5 (280-340)||(37588370-37588430)
[»] chr3 (58 HSPs)
chr3 (277-362)||(39980708-39980792)
chr3 (279-378)||(901887-901985)
chr3 (257-376)||(30443858-30443975)
chr3 (280-363)||(47132309-47132391)
chr3 (277-403)||(20170461-20170586)
chr3 (222-348)||(13715525-13715652)
chr3 (257-362)||(20880455-20880558)
chr3 (266-407)||(36631047-36631187)
chr3 (232-360)||(37689212-37689336)
chr3 (266-405)||(53789457-53789595)
chr3 (257-353)||(4401034-4401126)
chr3 (222-340)||(21367667-21367784)
chr3 (266-319)||(46478710-46478763)
chr3 (277-407)||(18405838-18405968)
chr3 (280-334)||(35696244-35696298)
chr3 (277-346)||(4526375-4526444)
chr3 (222-362)||(20257514-20257653)
chr3 (222-307)||(31365141-31365225)
chr3 (303-405)||(12862281-12862381)
chr3 (268-395)||(35959454-35959580)
chr3 (296-362)||(36189545-36189610)
chr3 (277-353)||(25348828-25348905)
chr3 (232-316)||(466217-466300)
chr3 (298-378)||(49034291-49034370)
chr3 (277-340)||(36887504-36887567)
chr3 (257-336)||(49556862-49556940)
chr3 (266-378)||(51929353-51929467)
chr3 (237-362)||(402510-402633)
chr3 (267-333)||(43062699-43062764)
chr3 (280-333)||(3845572-3845625)
chr3 (222-319)||(31365262-31365358)
chr3 (267-316)||(46031014-46031063)
chr3 (289-358)||(47587451-47587519)
chr3 (265-333)||(35394493-35394561)
chr3 (288-348)||(39602228-39602288)
chr3 (277-316)||(7301363-7301402)
chr3 (221-312)||(9832707-9832797)
chr3 (277-324)||(19983791-19983837)
chr3 (303-406)||(30956659-30956761)
chr3 (303-406)||(30972471-30972573)
chr3 (265-312)||(43015619-43015666)
chr3 (277-315)||(3044266-3044304)
chr3 (277-315)||(25925767-25925805)
chr3 (269-319)||(28795852-28795902)
chr3 (279-333)||(33972743-33972797)
chr3 (266-316)||(35574864-35574913)
chr3 (301-378)||(944517-944593)
chr3 (257-306)||(26911619-26911667)
chr3 (281-314)||(26990502-26990535)
chr3 (299-348)||(49092771-49092820)
chr3 (283-340)||(50600191-50600248)
chr3 (286-326)||(1141213-1141253)
chr3 (277-353)||(1816570-1816646)
chr3 (277-309)||(5391910-5391942)
chr3 (221-406)||(16072993-16073178)
chr3 (296-340)||(22203430-22203474)
chr3 (277-333)||(32582751-32582807)
chr3 (280-340)||(44747418-44747478)
[»] chr7 (48 HSPs)
chr7 (257-362)||(19302551-19302650)
chr7 (265-348)||(38138474-38138557)
chr7 (266-403)||(19022581-19022717)
chr7 (221-359)||(34744010-34744146)
chr7 (282-362)||(46280284-46280363)
chr7 (232-407)||(420294-420467)
chr7 (217-340)||(19214354-19214476)
chr7 (256-362)||(17944330-17944434)
chr7 (232-334)||(21568458-21568559)
chr7 (221-395)||(48469990-48470162)
chr7 (266-334)||(11619154-11619222)
chr7 (266-362)||(45338428-45338522)
chr7 (296-395)||(119856-119954)
chr7 (265-312)||(3928005-3928052)
chr7 (283-362)||(20269555-20269633)
chr7 (287-377)||(31744273-31744362)
chr7 (257-362)||(30570919-30571022)
chr7 (257-334)||(39629945-39630021)
chr7 (266-362)||(15309562-15309656)
chr7 (270-362)||(40252107-40252198)
chr7 (296-407)||(4970819-4970924)
chr7 (267-338)||(21196271-21196342)
chr7 (241-316)||(38499885-38499959)
chr7 (292-353)||(5569658-5569719)
chr7 (257-362)||(40377840-40377943)
chr7 (221-353)||(49019855-49019987)
chr7 (288-360)||(44821940-44822011)
chr7 (279-362)||(39279941-39280023)
chr7 (295-362)||(43694595-43694661)
chr7 (222-348)||(27863678-27863803)
chr7 (221-354)||(45593513-45593646)
chr7 (266-340)||(45790422-45790495)
chr7 (277-317)||(23989531-23989572)
chr7 (266-347)||(28341053-28341133)
chr7 (257-362)||(33601398-33601500)
chr7 (288-341)||(47130803-47130856)
chr7 (280-348)||(18865062-18865129)
chr7 (266-310)||(27566690-27566734)
chr7 (282-362)||(38639993-38640072)
chr7 (277-353)||(43648227-43648303)
chr7 (262-333)||(45004776-45004848)
chr7 (277-340)||(39967920-39967983)
chr7 (266-395)||(48507667-48507797)
chr7 (271-353)||(28614420-28614502)
chr7 (267-329)||(30181223-30181285)
chr7 (257-363)||(33602015-33602118)
chr7 (278-347)||(3308260-3308329)
chr7 (277-333)||(529382-529438)
[»] chr6 (28 HSPs)
chr6 (272-359)||(6536597-6536683)
chr6 (257-360)||(34430449-34430550)
chr6 (262-377)||(8201197-8201311)
chr6 (290-362)||(6538491-6538562)
chr6 (257-337)||(9763563-9763642)
chr6 (277-359)||(20368187-20368268)
chr6 (277-335)||(6016382-6016440)
chr6 (222-307)||(848022-848106)
chr6 (221-327)||(2455004-2455106)
chr6 (266-319)||(9912187-9912240)
chr6 (282-319)||(30536531-30536568)
chr6 (278-359)||(35070475-35070555)
chr6 (286-359)||(35099019-35099091)
chr6 (264-332)||(14929718-14929786)
chr6 (280-347)||(8844660-8844727)
chr6 (221-348)||(24982697-24982823)
chr6 (277-316)||(31624114-31624153)
chr6 (266-347)||(12836167-12836249)
chr6 (266-312)||(18076231-18076277)
chr6 (266-312)||(34430743-34430789)
chr6 (277-362)||(415283-415367)
chr6 (282-319)||(31624953-31624990)
chr6 (297-353)||(6200546-6200602)
chr6 (290-362)||(6909892-6909963)
chr6 (279-315)||(7148691-7148727)
chr6 (296-340)||(13907585-13907629)
chr6 (288-348)||(26694870-26694930)
chr6 (322-362)||(32515225-32515264)
[»] scaffold0050 (1 HSPs)
scaffold0050 (265-336)||(58746-58817)
[»] scaffold0221 (1 HSPs)
scaffold0221 (266-316)||(22255-22305)
[»] scaffold0103 (1 HSPs)
scaffold0103 (266-312)||(52005-52051)
[»] scaffold0147 (1 HSPs)
scaffold0147 (288-332)||(23639-23683)
[»] scaffold0012 (1 HSPs)
scaffold0012 (277-317)||(207584-207624)


Alignment Details
Target: chr2 (Bit Score: 392; Significance: 0; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 10 - 449
Target Start/End: Complemental strand, 12290126 - 12289688
Alignment:
Q  10 gcacagacacaggacactgacatgtcgacctcgataatattttaagataatataattcagggtaataacatgcagaaacactcacatggcagttctcaat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12290126 gcacagacacaggacactgacatgtcgacctcgataatattttaagataataaaattcagggtaataacatgcagaaacactcacatggcagttctcaat 12290027  T
Q  110 gaacgaaggaatgaatacaatgaagcccaacaaacattacactaacatgtcaactttaccaatcttattaagcttgtttggattggtttattcaggttta 209  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12290026 gaacaaaggaatgaatacaatgaagcccaataaacattacactaacatgtcaactttaccaatcttattaagcttgtttggattggtttattcaggttta 12289927  T
Q  210 actactgacatacataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagt 309  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12289926 actactgacatacataagtttcgtaatactgtttgggagaactattaaaaacag-tttatgacaatattcataagcttttttcaacttattttcataagt 12289828  T
Q  310 tctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagcttataac 409  Q
    |||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12289827 tctccaatataaattataaaaacaacttataacatgtaccaaaaacaatttaatgtcattttatcttttcctgtagaaacagcttaagcaagcttataac 12289728  T
Q  410 aagcacgtatttcgataagcacttgtgctataagctgttt 449  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  12289727 aagcacatatttcgataagcacttgtgctataagctgttt 12289688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 22 - 445
Target Start/End: Complemental strand, 12195269 - 12194847
Alignment:
Q  22 gacactgacatgtcgacctcgataatatttt---aagataatataattcagggtaataacatgcagaaacactcacatggcagttctcaatgaacgaagg 118  Q
    ||||||||||||||| || |||||||| |||   ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| ||| |    
T  12195269 gacactgacatgtcggccccgataataatttgagaagataatataattcagggtaataacatgcagatacactcgcatgacagttctcaatgaatgaatg 12195170  T
Q  119 aatgaatacaatgaagcccaacaaacattacactaacatgtcaactttaccaatcttattaagcttgtttggattggtttattcaggtttaactactgac 218  Q
    ||  | |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  12195169 aaacagtacagtgaagcccaacaaacattacactaacatatcaactttaccaatcttattaagcttgtttggattggtttattcaggcgtaactattgac 12195070  T
Q  219 atacataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaata 318  Q
    |||    |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  12195069 ata----agtttcgtcatactgtttgggagaactattaaaaacagctttatgacaattttcataagcttttttcaacttattttcacaagttctccaata 12194974  T
Q  319 tgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagcttataacaagcacgta 418  Q
    | ||||||| ||||||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||    
T  12194973 taacttatataaacaacctataacatataccaaaaacaattgaatgtcattttatcttttcctatagaaacagcttaagcaagcttataacaagcgcata 12194874  T
Q  419 tttcgataagcacttgtgctataagct 445  Q
    |||||||||||||||||||||||||||    
T  12194873 tttcgataagcacttgtgctataagct 12194847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 340
Target Start/End: Complemental strand, 26202102 - 26202028
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  26202102 ttatgacaattttcataagcttttttcaacttattttcataagttctccaatatatcttataaaaacaacttata 26202028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 270 - 407
Target Start/End: Complemental strand, 32592656 - 32592521
Alignment:
Q  270 gacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccatt 369  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||  ||||||||||||    |||    
T  32592656 gacaattttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagcgtatac--aaaacaatttaacattatt 32592559  T
Q  370 ttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
    ||||||||| || || ||| || ||| |||||||||||    
T  32592558 ttatctttttctataaaaatagtttatgcaagcttata 32592521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 257 - 405
Target Start/End: Original strand, 43279517 - 43279661
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||   ||||||||    
T  43279517 aaaacagctt-atgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagcata---caaaaaca 43279612  T
Q  357 atttaatgccattttatcttttcctgtagaaacagcttaagcaagctta 405  Q
    |||| |    ||||||||||||  | || ||| |||||| |||||||||    
T  43279613 atttcacattattttatcttttgatataaaaatagcttatgcaagctta 43279661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 406
Target Start/End: Original strand, 41241141 - 41241267
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctttt 378  Q
    ||||||||||||||| |||| ||||| ||||| ||||| || |||||  ||||| ||||||| |||||| ||||||||||||||   |||||||||||||    
T  41241141 cataagcttttttcagcttaatttcacaagttttccaagataacttaggaaaactacttatagcatata-caaaaacaatttaacttcattttatctttt 41241239  T
Q  379 cctgtagaaacagcttaagcaagcttat 406  Q
    ||| |||||| |||||| | ||||||||    
T  41241240 cctatagaaatagcttatgtaagcttat 41241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 20952430 - 20952348
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||| |||| ||||| | |||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||    
T  20952430 tttatgccaattttcattaacttttttcaacttattttcataagttctccaatatagctaataaaaacaacttatagcatata 20952348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 362
Target Start/End: Original strand, 39659461 - 39659600
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||||||||  |||| || |||||||  | |||||||||| |||||||  ||  ||||||||| ||| ||||| ||||||||||||| |||||     
T  39659461 acataagtttcgtgaggctgtctgagagaacttacgaaaacagctt-atgacaaattttctaagcttttgtcaccttatcttcataagttctctaatata 39659559  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
     ||||||||||||| |||||||||| | ||||||||||||||    
T  39659560 gcttataaaaacaagttataacataga-caaaaacaatttaa 39659600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 266 - 362
Target Start/End: Original strand, 15757654 - 15757750
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||| |||| |||||||||||| |||||||||||| ||||||   |||  |||||||| |||||||||| ||||||| |||||||||||||    
T  15757654 ttatgacaattttcagaagcttttttcagcttattttcatacgttctcttgtatagcttataaatacaacttatagcatatacaaaaaacaatttaa 15757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 266 - 378
Target Start/End: Original strand, 39073685 - 39073796
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgc 365  Q
    |||||||||| |||||||| ||  |||||||||||||||  |||||||||||||  ||||||||||  ||||||| |||||| |||||||||||||| |     
T  39073685 ttatgacaattttcataagtttcgttcaacttattttcactagttctccaatatagcttataaaaattacttatagcatata-caaaaacaatttaacgt 39073783  T
Q  366 cattttatctttt 378  Q
     ||||||||||||    
T  39073784 tattttatctttt 39073796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 12195406 - 12195300
Alignment:
Q  74 ataacatgcagaaacactcacatggcagttctcaatgaacgaaggaatgaatac-aatgaagcccaacaaacattacactaacatgtcaactttaccaat 172  Q
    ||||||| || |||||||  |||| ||||||||||||||||| ||||  ||||| |||||| ||||||| | ||||||||||||| ||||||||||||||    
T  12195406 ataacatacaaaaacacttgcatgccagttctcaatgaacga-ggaaccaatacgaatgaaacccaacacagattacactaacatatcaactttaccaat 12195308  T
Q  173 cttattaa 180  Q
    ||||||||    
T  12195307 cttattaa 12195300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 266 - 395
Target Start/End: Complemental strand, 45229585 - 45229458
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgc 365  Q
    |||||||| | ||||| ||||||||||| ||||||||||||||||||| || ||  ||||| ||||||| | |||||||||| ||||||||||||||       
T  45229585 ttatgacatttttcattagcttttttcagcttattttcataagttctcgaagatagcttatgaaaacaa-tgataacatata-caaaaacaatttaacct 45229488  T
Q  366 cattttatcttttcctgtagaaacagctta 395  Q
    ||||||||| ||| || |||||| ||||||    
T  45229487 cattttatcgtttgctatagaaatagctta 45229458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 15305792 - 15305697
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaat 317  Q
    |||||||||| |||| ||||||||| |||||| |  | |||| ||| ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  15305792 acataagttttgtgaaactgtttggtagaacttttgacaacaactt-atggcaattttcataagtttttttcaacttattttcataagttctccaat 15305697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 12290198 - 12290148
Alignment:
Q  128 aatgaagcccaacaaacattacactaacatgtcaactttaccaatcttatt 178  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12290198 aatgaagcccaacaaagattacactaacatatcaactttaccaatcttatt 12290148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 20926578 - 20926524
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  20926578 tttatgacaattttcattagcttttttcaacttattttcataagttctctaatat 20926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 40279508 - 40279408
Alignment:
Q  237 actgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaact 336  Q
    |||||||||||||||||| |||| || |||| | ||| | | ||||| || ||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  40279508 actgtttgggagaactatgaaaa-caacttt-taacattgtccataaactgttttcaacttattttcataagttctccaatatagcttatgaaaacaact 40279411  T
Q  337 tat 339  Q
    |||    
T  40279410 tat 40279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 362
Target Start/End: Complemental strand, 1625974 - 1625879
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||| |||||||| | |||||| || |||||| |||||||||||| ||  ||||| ||||||||||||||| |||| | ||||||||||||    
T  1625974 ttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttata-cgaaaacaatttaa 1625879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 11201376 - 11201471
Alignment:
Q  265 tttatgacaatattcataagcttttttcaactta-ttttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaattt 360  Q
    ||||||||||  |||||||||||||||||||| | |||||||||||||||||||||    || ||||||||||||||  ||||| ||||||||||||    
T  11201376 tttatgacaactttcataagcttttttcaactcatttttcataagttctccaatatagtatacaaaaacaacttatagtatata-caaaaacaattt 11201471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 362
Target Start/End: Complemental strand, 41851609 - 41851514
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||| | ||||||||||||| ||| |||| |||||||| |||||||| ||  ||| | ||||||||||||| |||||| ||||||||||||||    
T  41851609 ttatgacacttttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttatagcatata-caaaaacaatttaa 41851514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 404
Target Start/End: Original strand, 12464480 - 12464606
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctt 376  Q
    |||| |||||||||||| |||||||||| ||||||||||| ||  ||||| |||| | |||||| |||||| ||||||||||||||    ||||||||||    
T  12464480 ttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatata-caaaaacaatttaactttattttatctt 12464578  T
Q  377 ttcctgtagaaacagcttaagcaagctt 404  Q
    || ||  ||||| |||||| | ||||||    
T  12464579 tttctacagaaatagcttatgtaagctt 12464606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 340
Target Start/End: Complemental strand, 24101045 - 24100927
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagctt-ttttcaacttattttcataagttctccaatatg 320  Q
    ||||||||| |||| ||||||||||||||||     ||||| ||| |||||||||||||||||||| ||||| |||| |||| ||||||||| ||||||     
T  24101045 cataagttttgtgagactgtttgggagaacttatggaaacacctt-atgacaatattcataagctttttttctacttgtttttataagttcttcaatata 24100947  T
Q  321 acttataaaaacaacttata 340  Q
     ||||| ||||||| |||||    
T  24100946 gcttattaaaacaatttata 24100927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 222 - 316
Target Start/End: Complemental strand, 3611343 - 3611250
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||||||||| | |||||||||||||  ||  ||||||| ||| |||||| ||||||||| || |||| | ||||||||||||||||||||||    
T  3611343 cataagtttcgtaagactgtttgggagatttacgaaaaacaactt-atgacattattcataaactgtttttagcttattttcataagttctccaa 3611250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 347
Target Start/End: Original strand, 5745773 - 5745862
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||||||| |||||||| |||||||||||||| ||||| |||||| ||||| ||| |||||  |||||| ||| |||||||| ||||||    
T  5745773 aaaacagctt-atgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttatagaaataacttatagcatata 5745862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 407
Target Start/End: Complemental strand, 41407365 - 41407235
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctt 376  Q
    ||||||||||| ||| |  ||||||||| |||||||| || |  ||||||||||| |||||||| ||||||| |||||||||||||    ||||||||||    
T  41407365 ttcataagcttgtttaaggttattttcacaagttctcaaagaaaacttataaaaataacttatagcatatacaaaaaacaatttaactttattttatctt 41407266  T
Q  377 ttcctgtagaaacagcttaagcaagcttata 407  Q
    ||  |  ||||| |||||| | |||||||||    
T  41407265 ttggtacagaaatagcttatgtaagcttata 41407235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 40279260 - 40279176
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||| || |||||| || ||||||||||||||||||| ||  ||||| ||||||||||||| | |||||| ||||||||||||    
T  40279260 ttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttatacc-aaaacaatttaa 40279176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 36285486 - 36285435
Alignment:
Q  309 ttctccaatatgacttataaaaacaacttataacatataccaaaaacaattta 361  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  36285486 ttctccaatataacttatagaaacaacttataacatata-caaaaacaattta 36285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 40682347 - 40682438
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctc 313  Q
    |||||||||| |||| | ||||||||||||||    |||| ||||| |||||| | |||||||| | ||||||||||||||||||||||||||    
T  40682347 acataagttttgtgagattgtttgggagaacttgttaaaatagctt-atgacattgttcataagttgttttcaacttattttcataagttctc 40682438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 41812048 - 41812123
Alignment:
Q  225 aagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattt 301  Q
    |||||| ||||  ||||||||||||||| |  |||||||||| |||||| | |||||||||||||||||||||||||    
T  41812048 aagtttagtgaggctgtttgggagaacttttgaaaacagctt-atgacatttttcataagcttttttcaacttattt 41812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 42868479 - 42868526
Alignment:
Q  283 agcttttttcaacttattttcataagttctccaatatgacttataaaa 330  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  42868479 agcttttttcagcttattttcataagttctccaatataacttacaaaa 42868526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 10490693 - 10490608
Alignment:
Q  277 ttcataagc-ttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||| ||||||||||||||||| |||| || || || ||||||||| |||||| |||||| |||||| || |||||||||||    
T  10490693 ttcataagccttttttcaacttattttgataacttttcgaagatgacttatgaaaacaccttatagcatata-cagaaacaatttaa 10490608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 40279330 - 40279268
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttat 339  Q
    ||||||| || |||||| || ||||||||||||||||||||||  ||||| ||||||||||||    
T  40279330 ttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 40279400 - 40279338
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttat 339  Q
    ||||||| || |||||| || ||||||||||||||||||||||  ||||| ||||||||||||    
T  40279400 ttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 378
Target Start/End: Complemental strand, 2416431 - 2416276
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||| |||| |||| ||||||    ||||||||||| || || | |||| |||||  ||||| | || ||||||||||||||  ||||     
T  2416431 acataagttttgtgaaactgcttggaagaacttattaaaacagcttt-tgtcattgttcacaagctaatttcagcatactttcataagttctcttatata 2416333  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctttt 378  Q
    ||||||||||||| |||||| | |||| | ||||||||||||   |||||||||||||    
T  2416332 acttataaaaacagcttatagcttatatc-aaaacaatttaacttcattttatctttt 2416276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 23956039 - 23956080
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaata 318  Q
    ||||||||||||||||||||||||||||||| |||| |||||    
T  23956039 ttcataagcttttttcaacttattttcataaattcttcaata 23956080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 28206309 - 28206260
Alignment:
Q  298 attttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    ||||| ||||||||||||||||  ||||||||||||| ||||||||||||    
T  28206309 atttttataagttctccaatatagcttataaaaacaatttataacatata 28206260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 33319777 - 33319858
Alignment:
Q  232 gtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||| |||||||||||||||| | | ||| ||||| |||||| |  | |||||||||||||| ||||||||||||||||||||||    
T  33319777 gtgagactgtttgggagaacttttataaatagctt-atgacatt--taataagcttttttcagcttattttcataagttctccaa 33319858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 36125429 - 36125384
Alignment:
Q  272 caatattcataagcttttttcaacttattttcataagttctccaat 317  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||    
T  36125429 caattttcgtaagctttttttaacttattttcataagttctccaat 36125384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 29316751 - 29316821
Alignment:
Q  244 gggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||||||| |||||||||||| |||||| | |||||||| | |||||| ||||||| ||||||||||||||    
T  29316751 gggagaactaacaaaaacagctt-atgaca-tgttcataagttcttttcagcttatttccataagttctccaa 29316821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 42420219 - 42420286
Alignment:
Q  266 ttatgacaatattcataagcttttttcaac-ttattttcataagttctccaatatgacttataaaaaca 333  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||  ||| ||||||||    
T  42420219 ttatgacaattttcattagcttttttcaactttattttcataag-tctccaatatagcttgtaaaaaca 42420286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 354
Target Start/End: Original strand, 7483883 - 7483950
Alignment:
Q  288 ttttcaacttattttcataagttct-ccaatatgacttataaaaacaacttataacatataccaaaaa 354  Q
    |||||||||||||||||| | |||| |||| || |||||| |||||| |||||||||||||| |||||    
T  7483883 ttttcaacttattttcattacttcttccaaaataacttatgaaaacaccttataacatatacaaaaaa 7483950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 11864008 - 11863922
Alignment:
Q  232 gtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    |||| |||||||||||||||  |  |||||| | |||||||| | ||||||| ||||||| |||||||||| ||||||||| ||||||    
T  11864008 gtgagactgtttgggagaacatttgaaaacaac-ttatgacatttttcataaactttttttaacttattttaataagttcttcaatat 11863922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 18066210 - 18066128
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||| |||||| |  ||||||||| |||||| ||||||||| |||||||||||| ||  ||||| |||||| ||||||    
T  18066210 aaaacagctt-atgacattgctcataagctattttcaccttattttcttaagttctccaagatagcttatgaaaacagcttata 18066128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 360
Target Start/End: Complemental strand, 33941972 - 33941890
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaattt 360  Q
    ||||||||||  |||||||||||| ||||||  ||||||| ||  ||||| ||||||| ||||||| |||| ||||||||||||    
T  33941972 ttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttata-caaaaacaattt 33941890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 33981185 - 33981146
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  33981185 ttcataagcttttttcaacttaatttcataaattctccaa 33981146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 1810724 - 1810644
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||| ||||||||| |||||||||||||  ||| ||| ||  |||||||||||||| |||||| |||| ||||||||||||||    
T  1810724 ataaacttttttcagcttattttcataaactcttcaagatagcttataaaaacaac-tataacttata-caaaaacaatttaa 1810644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 16398173 - 16398123
Alignment:
Q  281 taagcttttttcaacttattttcataagttctccaatatgacttataaaaa 331  Q
    |||||| |||||| |||||||||||||||||||||| || |||||| ||||    
T  16398173 taagctgttttcagcttattttcataagttctccaacataacttatgaaaa 16398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 27695620 - 27695678
Alignment:
Q  295 cttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||||| |||||| |||||||  |||||||||||| |||||| ||||||| ||||    
T  27695620 cttattttcacaagttccccaatatagcttataaaaacagcttatatcatatacaaaaa 27695678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 30331804 - 30331755
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttataacata 345  Q
    ||||||||||||||||||||||||  |||||||||| | |||||| ||||    
T  30331804 ttattttcataagttctccaatatatcttataaaaatagcttatagcata 30331755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 346
Target Start/End: Original strand, 31561694 - 31561818
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| || | ||||||||||| |||| |  |||||||| | |||||  | |||||||| || ||| | |||| ||||||||||||||||| ||     
T  31561694 acataagttttgtaaaactgtttgggaaaacttttgaaaacagcat-atgacgtttttcataagattgtttaagcttactttcataagttctccaagata 31561792  T
Q  321 acttataaaaacaacttataacatat 346  Q
    | |||| |||||||||| || |||||    
T  31561793 agttatgaaaacaacttctatcatat 31561818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 43511148 - 43511111
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctcc 314  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  43511148 ttcataagctgttttcagcttattttcataagttctcc 43511111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 319
Target Start/End: Original strand, 1633509 - 1633541
Alignment:
Q  287 tttttcaacttattttcataagttctccaatat 319  Q
    ||||||| |||||||||||||||||||||||||    
T  1633509 tttttcagcttattttcataagttctccaatat 1633541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 40835597 - 40835549
Alignment:
Q  271 acaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    ||||| |||| ||||||||||   |||||||||||||||||||||||||    
T  40835597 acaattttcacaagctttttttggcttattttcataagttctccaatat 40835549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 4e-33; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 222 - 354
Target Start/End: Complemental strand, 49938864 - 49938733
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| | ||||||||||||||    |||||||||| |||||||| |||| |||||||||||||||||||||||||||||||| |||||      
T  49938864 cataagttttgtgagattgtttgggagaacttatgaaaacagctt-atgacaattttcaaaagcttttttcaacttattttcataagttctctaatatag 49938766  T
Q  322 cttataaaaacaacttataacatataccaaaaa 354  Q
    ||||||||||||||||||||||||||| |||||    
T  49938765 cttataaaaacaacttataacatatacaaaaaa 49938733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 42174929 - 42174842
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||||| |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  42174929 ttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatatacaaaaa 42174842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 17603359 - 17603475
Alignment:
Q  244 gggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataaca 343  Q
    |||||||||  | |||||||||| |||||||| ||||||| |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||| ||    
T  17603359 gggagaacttacgaaaacagctt-atgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaacaacttatagca 17603457  T
Q  344 tataccaaaaacaatttaa 362  Q
    |||| ||||||||||||||    
T  17603458 tata-caaaaacaatttaa 17603475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 473233 - 473143
Alignment:
Q  271 acaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| | | ||||||||||||    
T  473233 acaattttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaacttatagcataca-cgaaaacaatttaa 473143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 224 - 362
Target Start/End: Original strand, 3233970 - 3234106
Alignment:
Q  224 taagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgact 323  Q
    ||||||| |||| |||||| |||||||||    |||||| ||| || ||| | |||||||| ||||||| ||||||||||||||||||||||||||  ||    
T  3233970 taagttttgtgagactgttagggagaacttatgaaaacaactt-ataacagttttcataagtttttttctacttattttcataagttctccaatatagct 3234068  T
Q  324 tataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  3234069 tataaaaacaacttatagcatata-caaaaacaatttaa 3234106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 272 - 359
Target Start/End: Original strand, 1510312 - 1510398
Alignment:
Q  272 caatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatt 359  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||| |||| |||||||||||    
T  1510312 caattttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaacaacttataacctata-caaaaacaatt 1510398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 266 - 362
Target Start/End: Original strand, 41184646 - 41184741
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||   ||||||| ||| |||||| ||||| ||||||||||||||    
T  41184646 ttatgacaattttcataagtttttttcaacttattttcataagttttccaatatggtatataaaaccaaattataatatata-caaaaacaatttaa 41184741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 51929527 - 51929607
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaactta 338  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||   ||||||||||| ||||    
T  51929527 aaaacagctt-atgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaacagctta 51929607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 266 - 362
Target Start/End: Original strand, 24915047 - 24915142
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||| |   ||||| |||||| |||||| |||||| ||||||||||||||    
T  24915047 ttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatata-caaaaacaatttaa 24915142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 363
Target Start/End: Original strand, 27970247 - 27970387
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctcc-aatatg 320  Q
    ||||||||| |||||||| ||||||||||||   |||||| | ||||||||| | |||||||||||||||||  |||||||||||||||| || || ||     
T  27970247 cataagttttgtgatactctttgggagaacttataaaaacgg-tttatgacatttttcataagcttttttcagtttattttcataagttccccaaaaata 27970345  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaat 363  Q
      ||||  |||||||||||| |||||| |||||||||||||||    
T  27970346 gtttatggaaacaacttatagcatata-caaaaacaatttaat 27970387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 331
Target Start/End: Complemental strand, 2295213 - 2295105
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| ||||||||||||||||    |||||||||| |||||||| |||||||||| | ||||||||||||||| ||||||||  ||||      
T  2295213 cataagttttgtgagactgtttgggagaacttatgaaaacagctt-atgacaattttcataagctctattcaacttattttcacaagttctctgatatag 2295115  T
Q  322 cttataaaaa 331  Q
    ||||||||||    
T  2295114 cttataaaaa 2295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 14576642 - 14576744
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||||| |||||||| |||||  |||||||||| || ||||| |||||| ||||||||    
T  14576642 aaaacagctt-atgacaattttcaaaagcttttttcagcttattttca-aagttctctaatatagcttataaaaaaaaattatagcatata-caaaaaca 14576738  T
Q  357 atttaa 362  Q
    ||||||    
T  14576739 atttaa 14576744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 358
Target Start/End: Complemental strand, 1509813 - 1509734
Alignment:
Q  278 tcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaat 358  Q
    |||||||||||||||||||||||| || ||||||||||| |   |||||||||||||||||| ||||||| ||||||||||    
T  1509813 tcataagcttttttcaacttatttacacaagttctccaacagagcttataaaaacaacttattacatata-caaaaacaat 1509734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 362
Target Start/End: Complemental strand, 6557025 - 6556950
Alignment:
Q  286 ttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||| | |||||| |||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  6557025 tttttttagcttattgtcataagttctttaatataacttataaaaacaacttataacatata-caaaaacaatttaa 6556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 361
Target Start/End: Original strand, 37631558 - 37631649
Alignment:
Q  269 tgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaattta 361  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||||||  |||| ||||||| || ||| |||| | |||||||||||||    
T  37631558 tgacaattttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcataca-caaaaacaattta 37631649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 36872805 - 36872719
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||| ||||||  ||| ||||||||||||||| || |||| ||||    
T  36872805 ttatgacaattttgataagcttttt-caacttattttcataagttctgcaatatagcttgtaaaaacaacttatagcacatacaaaaa 36872719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 29904868 - 29904779
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttct 312  Q
    ||||||||| |||| |||||||| |||||||   ||||||||||| ||| |||| |||| |||||||||||| ||||||||||||||||||    
T  29904868 cataagttttgtgagactgtttgagagaacttataaaaacagctt-atggcaattttcaaaagcttttttcaccttattttcataagttct 29904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 354
Target Start/End: Complemental strand, 36872663 - 36872574
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaa 354  Q
    ||||||| ||| ||||||| ||||||||||||||||||||| |||||| |||| |  ||| |||||||||||| || ||||||| |||||    
T  36872663 tttatgaaaattttcataatcttttttcaacttattttcattagttctacaatgtaccttgtaaaaacaacttgtagcatatacaaaaaa 36872574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 43230780 - 43230845
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacata 345  Q
    |||||||||||||||||||||||||| |||||||||||||  | ||||| ||||||||||| ||||    
T  43230780 ataagcttttttcaacttattttcattagttctccaatatagcctataagaacaacttatagcata 43230845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 5709694 - 5709619
Alignment:
Q  272 caatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||  ||| |||||||| |||||| |||||||    
T  5709694 caattttcataagcttttt-caacttattttcacaagttctccaatatagcttctaaaaacaccttataccatatac 5709619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 41195157 - 41195239
Alignment:
Q  232 gtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    ||||||||||||||||||||| | | ||| ||||| |||||| | || |||||||||||||| ||||||||||||||||||||||    
T  41195157 gtgatactgtttgggagaacttttataaatagctt-atgacatt-ttaataagcttttttcagcttattttcataagttctccaa 41195239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 5709618 - 5709559
Alignment:
Q  291 tcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatacca 350  Q
    |||||||||||||||||||||||||||||  ||| |||||||||| |||| |||||||||    
T  5709618 tcaacttattttcataagttctccaatattgcttctaaaaacaacctataccatatacca 5709559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 404
Target Start/End: Complemental strand, 47432158 - 47432033
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctt 376  Q
    |||| |||||||||||| ||||||||||||| |||| |||||| |||||| |||||| |||||| |||||  ||||||||||||||    ||||||||||    
T  47432158 ttcacaagcttttttcagcttattttcataaattcttcaatataacttat-aaaacaccttatagcatat-tcaaaaacaatttaactttattttatctt 47432061  T
Q  377 ttcctgtagaaacagcttaagcaagctt 404  Q
    || || || ||| |||||| | ||||||    
T  47432060 tttctataaaaatagcttatgtaagctt 47432033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 15477647 - 15477578
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttata 327  Q
    |||||||||| |||||||| |||| |||||||||||| ||||| ||||||||||||| ||||| |||||||    
T  15477647 aaaacagctt-atgacaattttcaaaagcttttttcagcttatattcataagttctctaatataacttata 15477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 30581861 - 30581781
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||| ||||||||||||||||||||| || | |||||| |||||||||| |||||||| ||||||  |||||||||||||    
T  30581861 ataagctgttttcaacttattttcataagctcccaaatatggcttataaaaa-aacttatagcatata-aaaaaacaatttaa 30581781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 37473503 - 37473418
Alignment:
Q  239 tgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgactta 325  Q
    |||||||||||||| |  |||||| ||| |||||| | |||||||||||||| || |||||||||||||||||||||| || |||||    
T  37473503 tgtttgggagaacttttgaaaacaactt-atgacatttttcataagctttttccagcttattttcataagttctccaagataactta 37473418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 43990309 - 43990255
Alignment:
Q  286 ttttttcaacttatttt-cataagttctccaatatgacttataaaaacaacttat 339  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  43990309 ttttttcagcttattttgcataagttctccaagatgacttataaaaacaacttat 43990255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 36872328 - 36872248
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||||||||||||||| |||||||  | |||||||||  ||  ||||||||||||||||||||   ||||||||||||||    
T  36872328 ttcataagcttttttcaacttaatttcata--tgctccaatatagctagtaaaaacaacttataacata---caaaaacaatttaa 36872248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 30286507 - 30286589
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||| |||||||| |||||||||||||||||||| | |||  | |||||| ||| ||  |||||||||||||||||||    
T  30286507 aaaacagctt-atgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaacaacttata 30286589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 35179200 - 35179137
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataac 342  Q
    |||||||| |||||| |||||||||||||||||||||  || |||||| |||||| ||||||||    
T  35179200 cataagctgttttcagcttattttcataagttctccataataacttatgaaaacagcttataac 35179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 309
Target Start/End: Original strand, 37517119 - 37517205
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagt 309  Q
    ||||||||| |||| ||||| ||  ||||||  | |||||||||| |||||||| |||| ||||||||||||| ||||||||||||||    
T  37517119 cataagttttgtgagactgtatgaaagaacttacgaaaacagctt-atgacaattttcaaaagcttttttcaatttattttcataagt 37517205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 7137002 - 7137068
Alignment:
Q  274 atattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||||||| | |||||| |||||||||||||||||||||| ||  ||||| |||||| ||||||    
T  7137002 atattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttata 7137068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 406
Target Start/End: Original strand, 45661131 - 45661244
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaa 387  Q
    |||||||||||||||||| |||| || ||||| ||||||||| | ||||||||  |     ||||||||||||||||  |||||||||||| || || ||    
T  45661131 ttttcaacttattttcatcagttttctaatataacttataaagaaaacttatagta-----caaaaacaatttaatgttattttatcttttgctataaaa 45661225  T
Q  388 acagcttaagcaagcttat 406  Q
    |   |||||||||||||||    
T  45661226 atgacttaagcaagcttat 45661244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 2777957 - 2777892
Alignment:
Q  275 tattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||||  |||||| ||||||||||||||||||||||  | |||||| |||||| ||||||    
T  2777957 tattcataagccgttttcagcttattttcataagttctccaagttaacttattaaaacagcttata 2777892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 5887001 - 5887066
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataac 342  Q
    |||||||| | |||||| ||||||||| |||||||||||| ||| |||||| ||||| ||||||||    
T  5887001 ttcataagttgttttcagcttattttcgtaagttctccaagatggcttatagaaacagcttataac 5887066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 13810073 - 13809977
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||| |||| ||| |||| | | |||||||||| |||||||| |||||   ||||||||||||  |||| |||||| ||||||||||||||    
T  13810073 tttatgacaattttcaaaagtttttcttagcttattttcacaagttctctaatatagtttataaaaacaatatatagcatata-caaaaacaatttaa 13809977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 26779934 - 26779995
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||| | ||||||||||||||||||||||||| ||| ||  ||||| |||||||||||||    
T  26779934 cataagttgttttcaacttattttcataagttcttcaagatagcttatgaaaacaacttata 26779995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 33546455 - 33546536
Alignment:
Q  272 caatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||| ||||||||||||||  ||| |||||||||||| ||| |||| |  ||||||||||||||||| | ||||||| ||||    
T  33546455 caattttcataagctttttcaaacgtattttcataagctcttcaatctagcttataaaaacaacttagagcatatacaaaaa 33546536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 38503462 - 38503535
Alignment:
Q  267 tatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||| | |||||||| | |||||| |||||||||||||||||||||| ||  || | ||||||||||||||    
T  38503462 tatgacattgttcataagttgttttcagcttattttcataagttctccaagatagctaacaaaaacaacttata 38503535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 40977398 - 40977463
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaa 330  Q
    ||||||||||| |||| ||||||||| || |||||||||||| ||||||  ||||| |||||||||    
T  40977398 tttatgacaattttcaaaagctttttccagcttattttcatatgttctcttatatggcttataaaa 40977463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 3887628 - 3887676
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctcc 314  Q
    |||||||| | |||||||||| |||| ||||||||||||||||||||||    
T  3887628 ttatgacattgttcataagctgtttttaacttattttcataagttctcc 3887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 449
Target Start/End: Complemental strand, 18556986 - 18556818
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctttt 378  Q
    |||||||||||||||||||| |||||||| || || |||||  ||| ||||| ||||||||| | |||||  ||||||||||||    ||||||||||||    
T  18556986 cataagcttttttcaactta-tttcataatttttcaaatatagcttgtaaaagcaacttatagcgtatac--aaaacaatttaacaatattttatctttt 18556890  T
Q  379 cctgtagaaacagcttaagcaagcttata-acaagcacgtatttcgataagcacttgtgctataagctgttt 449  Q
     |  || ||| ||||||  |||||||||| |||||| |   |  |||||||  |||||||||||||||||||    
T  18556889 gcaataaaaatagcttatacaagcttatacacaagcgctcgtcacgataagtgcttgtgctataagctgttt 18556818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 27820344 - 27820400
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    |||||||||| |||||| ||||||||||||| |||||||| ||  ||||||||||||    
T  27820344 ttcataagctattttcagcttattttcataaattctccaagatagcttataaaaaca 27820400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 41505720 - 41505665
Alignment:
Q  306 aagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||||  |||||||||||| ||||||||||||| | ||||||||||||    
T  41505720 aagttctccaatatagcttataaaaacagcttataacatata-cgaaaacaatttaa 41505665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 353
Target Start/End: Original strand, 51695502 - 51695578
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||||| |||||| ||||||||||||| |||||||| ||  ||||| |||||| || ||||| ||||| ||||    
T  51695502 ttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaacatctgataacttatacgaaaa 51695578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 7218081 - 7218144
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||| ||||| ||||||||||||||||||||||||||||  ||   |||| |||||||||||||    
T  7218081 ttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttata 7218144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 17830222 - 17830179
Alignment:
Q  268 atgacaatattcataagcttttttcaacttattttcataagttc 311  Q
    |||||| | |||||||||||||||||||||||||||| ||||||    
T  17830222 atgacatttttcataagcttttttcaacttattttcaaaagttc 17830179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 28482237 - 28482303
Alignment:
Q  274 atattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||| || |||| | ||||||||| |||| ||||||| || ||||||||||||| ||||||    
T  28482237 atattcataaactatttttagcttattttcgtaagctctccaagataacttataaaaacagcttata 28482303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 31303629 - 31303686
Alignment:
Q  289 tttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||||||| |||||||||||| ||||  | ||||| |||||||||||||||||||||    
T  31303629 tttcaacttaatttcataagttcgccaaactaactta-aaaaacaacttataacatata 31303686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 34290302 - 34290236
Alignment:
Q  274 atattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||||||| | |||||| |||||||||||||||||| ||| ||  ||||| |||||| ||||||    
T  34290302 atattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttata 34290236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 45975755 - 45975697
Alignment:
Q  275 tattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    |||||||||||| |||||| ||||||||||||| |||||||| ||  ||||| ||||||    
T  45975755 tattcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaca 45975697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 7941688 - 7941632
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctcc 314  Q
    |||||||||| |||||| | |||  ||||| |||||||||||||||||||||||||||    
T  7941688 aaaacagctt-atgacattgttccgaagctattttcaacttattttcataagttctcc 7941632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 364
Target Start/End: Complemental strand, 11893259 - 11893175
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatg 364  Q
    ||||||||||||||| || |||||||| |||||| ||| ||  ||||| |||||||||||    ||||| ||||||||||||||||    
T  11893259 cataagcttttttcagctaattttcattagttcttcaacatagcttatgaaaacaacttaagtaatata-caaaaacaatttaatg 11893175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 341521 - 341469
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaata 318  Q
    |||||||||| |||||||| |||||||||  | ||||||||||||||| ||||    
T  341521 ttatgacaattttcataagtttttttcaatctgttttcataagttctctaata 341469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 10809397 - 10809345
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||| |||||||||||||||||||||||||  || || | |||||||||||    
T  10809397 ttttcagcttattttcataagttctccaatatagctgatgagaacaacttata 10809345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 14443501 - 14443449
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||| ||||||||||||| ||||||||| |  |||||||||||| ||||||    
T  14443501 ttttcaccttattttcataaattctccaatgtagcttataaaaacaccttata 14443449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 34795451 - 34795503
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    ||||||||||||||||||||||||  || ||||||||| | |||||| |||||    
T  34795451 ttattttcataagttctccaatatagctaataaaaacagcatataacgtatac 34795503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 38882919 - 38882955
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctc 313  Q
    |||||||| | ||||||||||||||||||||||||||    
T  38882919 ttcataaggtgttttcaacttattttcataagttctc 38882955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 54426160 - 54426036
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| |||| |||||||||||    |||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||      
T  54426160 cataagttttgtgagactgcttgggagaacttaggaaaacagctt-atgacaattttcataagcttttttcaagttattttcataagttctccaatatag 54426062  T
Q  322 cttataaaaacaacttataacatata 347  Q
     |||||||||||||||||||||||||    
T  54426061 attataaaaacaacttataacatata 54426036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 184 - 379
Target Start/End: Complemental strand, 2244202 - 2244010
Alignment:
Q  184 tgtttggattggtttattcaggtttaactactgacatacataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataa 283  Q
    ||||||||||| ||||| |  ||||| |||||||    |||||||||  ||| |||||||||||||| | | ||||||||| ||||||||||||||||||    
T  2244202 tgtttggattgatttatccgagtttatctactga----cataagttttttgaaactgtttgggagaatttttaaaaacagc-ttatgacaatattcataa 2244108  T
Q  284 gcttttttcaacttattttcataagttctccaatatgacttata--aaaacaacttataacatataccaaaaacaatttaatgccattttatcttttc 379  Q
     ||||||||| |||||||||||||||||||||||||  ||||||  ||||||||||||| ||||   |||||||||  ||||   |||||||||||||    
T  2244107 acttttttcaccttattttcataagttctccaatatagcttatattaaaacaacttatagcataatacaaaaacaacgtaatattattttatcttttc 2244010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 224 - 407
Target Start/End: Original strand, 50681044 - 50681225
Alignment:
Q  224 taagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgact 323  Q
    ||||||| |||| |||||||| |||||||    ||||||| || |||||||| |||||||||||||||||| |||||||||||| |||||||||||  ||    
T  50681044 taagttttgtgagactgtttgagagaacttatgaaaacag-ttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagct 50681142  T
Q  324 tataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
    |||| |||||||||||| |||||| ||||||||||||||    |||||||||| |||| || ||| |||||  | |||||||||    
T  50681143 tatataaacaacttatagcatata-caaaaacaatttaacattattttatcttatcctataaaaatagcttttgtaagcttata 50681225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 338
Target Start/End: Original strand, 39603124 - 39603238
Alignment:
Q  223 ataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgac 322  Q
    |||||||| |||| ||||||||||||||||    |||||||||| |||||||| || |||||||||||| || ||||||||||||||||||||||||  |    
T  39603124 ataagttttgtgagactgtttgggagaacttaggaaaacagctt-atgacaatttttataagctttttttaagttattttcataagttctccaatatacc 39603222  T
Q  323 ttataaaaacaactta 338  Q
    ||||||||||||||||    
T  39603223 ttataaaaacaactta 39603238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 408
Target Start/End: Original strand, 55414408 - 55414557
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||| || |||||| ||||||| ||||| |||||  |||||| |    
T  55414408 aaaacagctt-atgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatat-gcaaaaaaa 55414505  T
Q  357 atttaatgccattttatcttttcctgtagaaacagcttaagcaagcttataa 408  Q
    | ||||    ||||||||||||||  |||||| |||||| ||| ||||||||    
T  55414506 aattaactttattttatcttttccaatagaaatagcttatgcacgcttataa 55414557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 46592205 - 46592287
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttat-aaaaacaacttataacatata 347  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  46592205 ttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaaacaacttataacatata 46592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 353
Target Start/End: Original strand, 33586949 - 33587038
Alignment:
Q  264 ctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||  |||||||||||||| |||||||||||| ||||    
T  33586949 ctttaagacaatattcataagcttttcttaacttattttcataagttctccgatatagcttataaaaacaacctataacatatacaaaaa 33587038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 353
Target Start/End: Original strand, 21731608 - 21731739
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||| | ||||||||||||||    |||||||||| || ||||| ||||||| |||||||||||||| |||||||| |||||||||||     
T  21731608 acataagttttgtgagattgtttgggagaacttatgaaaacagctt-atcacaattttcataaacttttttcaacttactttcataaattctccaatata 21731706  T
Q  321 acttataaaaacaacttataacatataccaaaa 353  Q
     ||||||||||||||||||| || |||| ||||    
T  21731707 gcttataaaaacaacttatagcacatacaaaaa 21731739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 360
Target Start/End: Original strand, 7839357 - 7839450
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaattt 360  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| |||| |  ||||||||||||| ||||| |||||| ||||||||||||    
T  7839357 ttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaatttatagcatata-caaaaacaattt 7839450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 46588069 - 46588151
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttat-aaaaacaacttataacatata 347  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  46588069 ttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaaacaacttatagcatata 46588151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 348
Target Start/End: Original strand, 50662736 - 50662816
Alignment:
Q  268 atgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||||||  |||||| |||||||||||| |||||||    
T  50662736 atgacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaacaacttatagcatatac 50662816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 407
Target Start/End: Original strand, 54069418 - 54069553
Alignment:
Q  271 acaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattt 370  Q
    ||||| |||||||||| |||| |||||||||||||| ||||| |||||| |||||||||||||| ||||| |||||| ||||||||||||||    ||||    
T  54069418 acaattttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatata-caaaaacaatttaacattattt 54069516  T
Q  371 tatcttttcctgtagaaacagcttaagcaagcttata 407  Q
    ||||||||  | || ||| ||| || |||||||||||    
T  54069517 tatcttttgatataaaaatagcatatgcaagcttata 54069553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 362
Target Start/End: Complemental strand, 29388732 - 29388593
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| || | | ||||||||||||||  | ||| ||| ||||||||||| || ||| ||| |||||||||||||||||||| ||||||| |||     
T  29388732 acataagttttgtaagattgtttgggagaacttacgaaagcag-tttatgacaatttttatatgctcttttcaacttattttcataaattctccagtata 29388634  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
     ||||||||||| |||||| |||| || ||||||||||||||    
T  29388633 gcttataaaaactacttatcacatcta-caaaaacaatttaa 29388593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 347
Target Start/End: Original strand, 17822853 - 17822942
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||||||| |||||| | ||||||||||||||| | |||||||||||||||||||||| ||  ||||| ||||||||||||| ||||||    
T  17822853 aaaacagctt-atgacatttttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatagcatata 17822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 402
Target Start/End: Complemental strand, 20109072 - 20108948
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctt 376  Q
    |||| ||||||||||| ||| ||||||| |||||||| |||||  |||||||||||| |||||| |||||| ||||||||| ||||   |||||||||||    
T  20109072 ttcacaagcttttttcgactcattttcaaaagttctctaatatatcttataaaaacagcttataccatata-caaaaacaacttaacttcattttatctt 20108974  T
Q  377 ttcctgtagaaacagcttaagcaagc 402  Q
    ||||| || ||  |||||| ||||||    
T  20108973 ttcctctaaaactagcttatgcaagc 20108948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 13126528 - 13126619
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctc 313  Q
    |||||||||| |||| ||||||||| ||||||   ||||||||||| |||||| |  |||||||||||||||| |||||||||||||||||||    
T  13126528 acataagttttgtgagactgtttggaagaacttataaaaacagctt-atgacatttatcataagcttttttcagcttattttcataagttctc 13126619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 39691154 - 39691231
Alignment:
Q  281 taagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaattt 360  Q
    |||| |||||||||||||||||| |||||||| ||||||  ||||||||||||||||||| |||||||  ||||||||||    
T  39691154 taagtttttttcaacttattttcgtaagttcttcaatatagcttataaaaacaacttatagcatatac--aaaacaattt 39691231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 22030320 - 22030190
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| ||||  || ||||||||||||    |||||||||| |||||||| |||| |||||||| |||  |||||||||||||||||| ||| | |    
T  22030320 cataagttttgtgagcctatttgggagaacttatgaaaacagctt-atgacaattttcaaaagcttttctcaggttattttcataagttctctaatttaa 22030222  T
Q  322 cttataaaaacaacttataacatataccaaaa 353  Q
    ||| ||| ||||||||||| ||||||| ||||    
T  22030221 cttgtaagaacaacttatagcatatacaaaaa 22030190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 24169417 - 24169287
Alignment:
Q  181 gcttgtttggattggtttattcaggtttaactactgacatacataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattca 280  Q
    ||||||||||||||| |||||   ||||| ||||||     ||||||||| |||| ||| |||| ||||||| | ||||| ||| |||||||| | ||||    
T  24169417 gcttgtttggattggcttattagagtttatctactg----gcataagttttgtgagactatttgagagaacttttaaaaatagc-ttatgacatttttca 24169323  T
Q  281 taagcttttttcaacttattttcataagttctccaa 316  Q
    |||| ||||||||||||||||||||||| |||||||    
T  24169322 taagattttttcaacttattttcataagctctccaa 24169287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 360
Target Start/End: Complemental strand, 2996634 - 2996554
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaattt 360  Q
    |||||||||||||||||||||||||||| | ||||||| ||  ||||| ||||||||||||||| ||||  |||||||||||    
T  2996634 cataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttata-taaaaacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 362
Target Start/End: Complemental strand, 41336842 - 41336739
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||| | ||||||||||||||||||||||||||| ||| |||| ||   |  |||| |||||||| |||||||||||| ||||||||    
T  41336842 aaaacagctt-atgacagttttcataagcttttttcaacttattttcgtaaattcttcaccctagcttagaaaaacaatttataacatata-caaaaaca 41336745  T
Q  357 atttaa 362  Q
    ||||||    
T  41336744 atttaa 41336739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 53294121 - 53294205
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||| ||||| |||||| ||| ||||||||||||||| |||||   |||||||||||||||||| |||||| ||||||||||||||    
T  53294121 ttcaaaagctattttcagcttgttttcataagttctctaatatagtttataaaaacaacttatagcatata-caaaaacaatttaa 53294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 44862980 - 44863048
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaa 334  Q
    ||||||| || ||||||||||||||||||||||||| |||||||||| |||| |  |||||||||||||    
T  44862980 ttatgacgattttcataagcttttttcaacttatttgcataagttctacaatttagcttataaaaacaa 44863048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 40831040 - 40831098
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttat 339  Q
    |||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||    
T  40831040 ataagcttttttcaacttattt-cataagttctccaatctagcttataaaaacaacttat 40831098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 234 - 362
Target Start/End: Complemental strand, 55064940 - 55064812
Alignment:
Q  234 gatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgac--ttataaaaa 331  Q
    ||||||||||||||||||| |  |||||| ||| |||||| | ||||  ||||||||||| |||||||||||||||||||||| || ||  |||| ||||    
T  55064940 gatactgtttgggagaacttttgaaaacaactt-atgacatttttcaatagcttttttcatcttattttcataagttctccaagataacatttatgaaaa 55064842  T
Q  332 caacttataacatataccaaaaacaatttaa 362  Q
    || | |||| |||| | ||||||||||||||    
T  55064841 cagcatatagcataca-caaaaacaatttaa 55064812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 1374572 - 1374634
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataa 328  Q
    ||||||||||||||||||  | ||||||||||||||||||||  |||||||||| ||||||||    
T  1374572 ttatgacaatattcataaattattttcaacttattttcataaaatctccaatataacttataa 1374634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 9760484 - 9760434
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttataacatat 346  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaacttatagcatat 9760434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 395
Target Start/End: Complemental strand, 17884131 - 17884014
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctt 376  Q
    |||||||| | |||||| || ||||||||||| ||||||||||  ||||| ||||||||| ||||| |||| ||||||||||||||    ||||||||||    
T  17884131 ttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttata-caaaaacaatttaactttattttatctt 17884033  T
Q  377 ttcctgtagaaacagctta 395  Q
    ||  | |||||| ||||||    
T  17884032 ttgttatagaaatagctta 17884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 18425875 - 18425791
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||||||| ||||||||||| ||| ||||||||| ||| ||| | ||||||  ||||||||| || ||||||||||||||    
T  18425875 ttcataagctttttccaacttatttttatatgttctccaagatggcttttgaaaacattttataacatgta-caaaaacaatttaa 18425791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 25904175 - 25904269
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||| ||| |||| ||||||||||||| ||    |||||||||| ||| || | ||||||||||||||||| |||||||| |||||||||||||    
T  25904175 acataaattttgtgagactgtttgggagagcttatgaaaacagctt-atgccatttttcataagcttttttcagcttatttttataagttctccaa 25904269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 55302323 - 55302273
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||| |||||    
T  55302323 ttatgacaattttcgtaagcttttttcagcttattttcataagttttccaa 55302273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 25332891 - 25332803
Alignment:
Q  223 ataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttct 312  Q
    |||||||| |||| ||| ||||||||||||  | |||||| ||| ||| || |||||||||| | |||||| ||||||||||||||||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaactt-atggcattattcataagttgttttcagcttattttcataagttct 25332803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 35571602 - 35571714
Alignment:
Q  240 gtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttat 339  Q
    ||||||||||||| | ||||||||||| || ||| | ||||| ||||  |||||||||||||||| |||||||| || ||  ||||| |||||| |||||    
T  35571602 gtttgggagaacttttaaaaacagctt-attacactgttcatgagctggtttcaacttattttcacaagttctctaagatagcttatgaaaacagcttat 35571700  T
Q  340 aacatataccaaaa 353  Q
    | | ||||| ||||    
T  35571701 agcttatacgaaaa 35571714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 395
Target Start/End: Original strand, 52315193 - 52315321
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgc 365  Q
    |||| ||| |||||||||| |  ||||| |||||||||||||||| ||||| ||  |||||  |||||||||||||| | ||| |||||||||| ||       
T  52315193 ttatcacattattcataagttgctttcagcttattttcataagttttccaaaatagcttatggaaacaacttataac-tttactaaaaacaattaaactt 52315291  T
Q  366 cattttatcttttcctgtagaaacagctta 395  Q
     |||| ||||||| ||||||||| ||||||    
T  52315292 tatttcatcttttgctgtagaaatagctta 52315321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 11264362 - 11264294
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    ||||| || |||||||||||||| |||||| |||| |  ||| ||||| ||||||||||||||||||||    
T  11264362 cataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaacttataacatata 11264294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 11347853 - 11347765
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttatttt-cataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||||| |||||||||| |||| ||||| |||| |||||||||||| |||   |||||||||| ||||||||  |||||| ||||    
T  11347853 ttatgacaattttcataagctatttttaacttgtttttcataagttctccgataaatcttataaaaataacttatagtatatacaaaaa 11347765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 36243418 - 36243483
Alignment:
Q  278 tcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacata 345  Q
    ||||||| ||||||||||||| |||||||||| |||||||||  ||| || |||||||||||| ||||    
T  36243418 tcataagtttttttcaacttagtttcataagtcctccaatat--cttgtataaacaacttatatcata 36243483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 44138633 - 44138565
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaa 334  Q
    |||||||| |||||| ||||  |||||| |||||||||||||||||||||| |||  |||| |||||||    
T  44138633 ttatgacattattcacaagcaattttcagcttattttcataagttctccaacatggtttatgaaaacaa 44138565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 52259691 - 52259631
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||| ||||||||||||||||||||| ||||| | ||  |||||||||||| ||||||    
T  52259691 ataagctattttcaacttattttcataagctctcccagatagcttataaaaacagcttata 52259631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 56249587 - 56249547
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaat 317  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  56249587 ttcataagcttttttcaacttattttcttaagtcctccaat 56249547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 407
Target Start/End: Original strand, 15177204 - 15177338
Alignment:
Q  272 caatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccatttt 371  Q
    |||| |||||||| ||||||||| | |||||||| ||||||| | |||  ||||||||||| ||||||| || |||  || |||||||||| |  |||||    
T  15177204 caattttcataagtttttttcaaatgattttcattagttctctagtatagcttataaaaaccacttatagcacata-gaagaacaatttaacgttatttt 15177302  T
Q  372 atcttttcctgtagaaacagcttaagcaagcttata 407  Q
    ||||||  || |  ||| |||||| |||||||||||    
T  15177303 atctttagctattaaaatagcttatgcaagcttata 15177338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 349
Target Start/End: Complemental strand, 49202762 - 49202636
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| ||||||||| ||||||   |||| ||| || || ||| | |||||||| | |||||||||||||||||| |||| ||||| ||      
T  49202762 cataagttttgtgagactgtttggaagaacttataaaaccagatt-atcacattgttcataagttgttttcaacttattttcattagttatccaagatag 49202664  T
Q  322 cttataaaaacaacttataacatatacc 349  Q
    ||||  ||||||||||||| | ||||||    
T  49202663 cttacgaaaacaacttatagcttatacc 49202636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 331
Target Start/End: Original strand, 26853 - 26925
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaa 331  Q
    |||||||||| |||||||  |||| ||||||||| ||  ||||||||||||||||||||||||  ||||||||||    
T  26853 aaaacagctt-atgacaaatttcacaagcttttt-cagattattttcataagttctccaatatagcttataaaaa 26925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 407
Target Start/End: Original strand, 31076425 - 31076522
Alignment:
Q  309 ttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
    |||| ||||||  ||||||||||||| ||||| |||||| |||||||| |||||    |||||||||||| || || ||| |||||| |||||||||||    
T  31076425 ttcttcaatatagcttataaaaacaatttatagcatata-caaaaacagtttaaacttattttatcttttgctctaaaaatagcttatgcaagcttata 31076522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 43505998 - 43505940
Alignment:
Q  277 ttcataagctttttt-caacttattttcataagttctccaatatgacttataaaaacaa 334  Q
    ||||||||||||||| ||||||||||||||| | |||||||| |  |||||||||||||    
T  43505998 ttcataagctttttttcaacttattttcatatgatctccaatctagcttataaaaacaa 43505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 362
Target Start/End: Original strand, 54392837 - 54392910
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||||||| || |||||||| ||  ||||| |||||| || ||| |||||| ||||||||||||||    
T  54392837 ttttcaacttattttcaaaatttctccaagatatcttattaaaacagctaatagcatata-caaaaacaatttaa 54392910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 437256 - 437317
Alignment:
Q  282 aagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataaca 343  Q
    |||||||| ||| ||||||||||||| |||||||||||   ||||||||||| || ||||||    
T  437256 aagcttttctcagcttattttcataaattctccaatatagtttataaaaacagctcataaca 437317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 16199991 - 16200064
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||| ||||| | ||||||||||||||| |||||| ||  ||||| |||||| |||||| ||||||| ||||    
T  16199991 ataagccttttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaaa 16200064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 19250607 - 19250546
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||||  |||||||||||||| ||| | ||| ||| || ||||||||||||||||||||    
T  19250607 cataagctgatttcaacttatttttatatgctcttcaagataacttataaaaacaacttata 19250546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 28614804 - 28614851
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctc 313  Q
    ||||||||| ||| |||||||| |||||| |||||||||||||||||||    
T  28614804 tttatgaca-tatccataagctcttttcagcttattttcataagttctc 28614851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 318
Target Start/End: Original strand, 39011148 - 39011176
Alignment:
Q  290 ttcaacttattttcataagttctccaata 318  Q
    |||||||||||||||||||||||||||||    
T  39011148 ttcaacttattttcataagttctccaata 39011176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 41512714 - 41512646
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacata 345  Q
    ||||||||||||| ||| |||||||||||||||||| | | |   ||||| ||||||||||||| ||||    
T  41512714 ttcataagcttttatcatcttattttcataagttcttccagaaagcttatgaaaacaacttatagcata 41512646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 56007731 - 56007679
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||| |||||||||  ||||| ||||||| || ||||||||||||||||||||    
T  56007731 ttttgaacttatttctataagctctccaagataacttataaaaacaacttata 56007679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 222 - 362
Target Start/End: Complemental strand, 26771382 - 26771244
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| ||||||||||||||||    |||||||||| |||||||| |||| |||| ||||||||||||||||||||||||||| |||||      
T  26771382 cataagttttgtgagactgtttgggagaacttatgaaaacagctt-atgacaattttcaaaagcctttttcaacttattttcataagttctctaatatat 26771284  T
Q  322 cttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||| | |||||| |||||| ||||||||||||||    
T  26771283 cttataaaaaaagcttatagcatata-caaaaacaatttaa 26771244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 379
Target Start/End: Original strand, 35534565 - 35534719
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||| |||||||| |||||||    |||||||||| |||||||| || | |||||||||||  |||| ||||||||||||||||||||     
T  35534565 acataagttttgtgagactgtttgagagaacttgtgaaaacagctt-atgacaattttaacaagcttttttcggcttactttcataagttctccaatata 35534663  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttc 379  Q
    |||||| |||||||| |||||||||   ||||||||||||||    |||||||||||||    
T  35534664 acttatgaaaacaacatataacata---caaaaacaatttaactttattttatcttttc 35534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 16736159 - 16736047
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatg 364  Q
    |||||||||||||| |||||||| |||||| |||||||||||| || ||||||||   ||||||| |||||||||||||| || ||||||| ||||||||    
T  16736159 tttatgacaatatttataagcttctttcaagttattttcataaattttccaatatagtttataaagacaacttataacatgta-caaaaactatttaatg 16736061  T
Q  365 ccattttatctttt 378  Q
      ||||||||||||    
T  16736060 ttattttatctttt 16736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 348
Target Start/End: Original strand, 30251406 - 30251532
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    ||||||||||||||| ||||||||||||||||  | ||||||||||  || || | |||||||||||||| || |||||||||||||||  ||||| ||     
T  30251406 acataagtttcgtgagactgtttgggagaacttacgaaaacagcttattg-catttttcataagctttttacagcttattttcataagtggtccaagata 30251504  T
Q  321 acttataaaaacaacttataacatatac 348  Q
     ||||| |||||| ||||||||||||||    
T  30251505 gcttatgaaaacagcttataacatatac 30251532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 345
Target Start/End: Original strand, 36963307 - 36963428
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| ||||||||||||||||  ||||||||||||| ||||||| |||| ||||||||| ||||||||||| || ||||||| |||||      
T  36963307 cataagttttgtgagactgtttgggagaacttacaaaaacagcttt-tgacaattttcaaaagctttttacaacttatttt-attagttctctaatatag 36963404  T
Q  322 cttataaaaacaacttataacata 345  Q
     | | |||||||||||||| ||||    
T  36963405 ttcagaaaaacaacttatagcata 36963428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 346
Target Start/End: Complemental strand, 28763486 - 28763362
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagc-ttttttcaacttattttcataagttctccaatat 319  Q
    |||||||||| |||| ||||||||||||||||    |||||||| |||| ||||| ||||||||| ||||||||||||| ||||||||||||  ||||||    
T  28763486 acataagttttgtgagactgtttgggagaacttatgaaaacagc-ttataacaattttcataagctttttttcaactta-tttcataagttcagcaatat 28763389  T
Q  320 gacttataaaaacaacttataacatat 346  Q
      |||||||||||||||| || |||||    
T  28763388 agcttataaaaacaacttctagcatat 28763362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 319
Target Start/End: Original strand, 35643983 - 35644037
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  35643983 tttatgacaattttcataagcttttttcaacttattttcataagctctccaatat 35644037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 362
Target Start/End: Original strand, 9130302 - 9130398
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||| ||  |||| ||||||||||||||||||| |||||||  ||||| ||||||||||||||||||||  |||||  |||||| ||||||    
T  9130302 ttatgacaatttttgtaagtttttttcaacttattttcacaagttctttaatattacttataaaaacaacttatagaatatataaaaaaccatttaa 9130398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 362
Target Start/End: Original strand, 16825534 - 16825628
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||  ||||||  ||| || |||||||||||||| || | ||||||||||||||    
T  16825534 ttatgacaattttcataagctttt-tcaacttattttcataagttcggcaatatagcttgtagaaacaacttataacgta-aacaaaaacaatttaa 16825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 223 - 362
Target Start/End: Complemental strand, 18133772 - 18133635
Alignment:
Q  223 ataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgac 322  Q
    |||||||| |||| ||||||||||||| ||    ||| |||| |||| ||||| |||| |||||||||||| |||||||||||||||||||||||||       
T  18133772 ataagttttgtgagactgtttgggagagcttgtgaaatcagc-ttataacaattttcacaagcttttttcagcttattttcataagttctccaatatagt 18133674  T
Q  323 ttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||| || ||||||  ||||| ||||| ||||||||    
T  18133673 ttataaaaccagcttataggatata-caaaagcaatttaa 18133635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 10758245 - 10758347
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||||| |||| |||||||||||| ||| ||||||||||||  | |||||  |||||||| |||||||||| |||||| ||||||||    
T  10758245 aaaacagctt-atgacaattttcaaaagcttttttcagcttgttttcataagtt-gctaatatagcttataaagacaacttatagcatata-caaaaaca 10758341  T
Q  357 atttaa 362  Q
    ||||||    
T  10758342 atttaa 10758347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 11861867 - 11861790
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaa 354  Q
    |||| |||||||||| ||| ||||||||||||||||| | |||  ||||||||||||||||||| ||||||| |||||    
T  11861867 ttcaaaagctttttttaacgtattttcataagttctctattatagcttataaaaacaacttatagcatatacaaaaaa 11861790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 15180595 - 15180475
Alignment:
Q  286 ttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtag 385  Q
    |||||| |||||||||||| ||||||||||||||  |||||| |||||||||||||||| || |||||| ||||||| |  |  ||||||||| |||||     
T  15180595 ttttttaaacttattttcagaagttctccaatatagcttatagaaacaacttataacattta-caaaaataatttaacgatacgttatcttttgctgtac 15180497  T
Q  386 aaacagcttaagcaagcttata 407  Q
    ||| | |||| |||| ||||||    
T  15180496 aaataacttatgcaaacttata 15180475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 378
Target Start/End: Complemental strand, 37945678 - 37945560
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||||| | ||||||| ||||| |||||||||||| ||||| | ||||||  |||||||||||||| |||| |||||| |||||  |    
T  37945678 aaaacagctt-atgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaacaac-tatagcatata-caaaatta 37945582  T
Q  357 atttaatgccattttatctttt 378  Q
    |||||| || ||||||||||||    
T  37945581 atttaaagctattttatctttt 37945560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 362
Target Start/End: Complemental strand, 27028948 - 27028810
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| | |||||||||||| |    |||||||||| | |||| | |||||||||| |||||| |||||||||||||| ||||||| ||      
T  27028948 cataagtttagtgagattgtttgggagaaattctgaaaacagctt-aggacatttttcataagctattttcagcttattttcataagctctccaagatag 27028850  T
Q  322 cttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||| |||||| |||||| |||||| || |||||||||||    
T  27028849 cttatgaaaacagcttatagcatata-cacaaacaatttaa 27028810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 29168921 - 29169012
Alignment:
Q  299 ttttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacag 391  Q
    |||||||||||| |||||||| |||||  |||||| ||||||||||||| |||||| ||||||||   |||||||||||| || |||||||||    
T  29168921 ttttcataagttttccaatataacttaggaaaacagcttataacatata-caaaaataatttaatttaattttatcttttgctatagaaacag 29169012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 381
Target Start/End: Complemental strand, 38648469 - 38648311
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||| ||||||||||||| ||    |||||||||  |||||| |  |||||||||||||| | | || ||||||||||||| ||| ||     
T  38648469 acataagttttgtgagactgtttgggagaccttatgaaaacagctc-atgacagttctcataagcttttttaagcgtaatttcataagttctacaagata 38648371  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcct 381  Q
     ||||| ||||||||| |||||||||| ||||||||| |||||   |||| ||||||||||    
T  38648370 gcttatgaaaacaactcataacatata-caaaaacaagttaattttatttaatcttttcct 38648311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 43045726 - 43045774
Alignment:
Q  271 acaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  43045726 acaattttaataagcttttttcaacttattttcataagttctccaatat 43045774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 388
Target Start/End: Complemental strand, 29205929 - 29205761
Alignment:
Q  217 acatacataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||| ||||||||  |||||||||| || |||||||    |||||||| | |||||| | ||||||||||||||| ||| || |||||||| ||||||||    
T  29205929 acatgcataagttctgtgatactgtctgagagaacttattaaaacagcgt-atgacatttttcataagctttttt-aacctactttcataaattctccaa 29205832  T
Q  317 tatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaa 388  Q
     ||   |||| |||| |||||||| ||||||| |||||||||||||   ||||||||||||| || ||||||    
T  29205831 aatagtttatgaaaataacttatagcatatac-aaaaacaatttaacttcattttatctttttctatagaaa 29205761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 29818936 - 29818991
Alignment:
Q  292 caacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||| ||||||    
T  29818936 caacttattttcataagctcgccaatatggcttataaaaacaacttatagcatata 29818991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 30657798 - 30657847
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttataacata 345  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  30657798 ttattttcataagttctccaatatagcttataaaaacatcttataacata 30657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 1058028 - 1058122
Alignment:
Q  220 tacataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    ||||||||||| |||| |||||||||||||||| |  ||||| || |||||||| | ||||| || |||||||  ||||||||||||||||||||||    
T  1058028 tacataagttttgtgagactgtttgggagaacttttgaaaactgc-ttatgacatttttcattag-ttttttccgcttattttcataagttctccaa 1058122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 407
Target Start/End: Original strand, 42043370 - 42043481
Alignment:
Q  295 cttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagctt 394  Q
    |||||| |||| ||||||| || ||  ||||| ||||||||||||| ||||| |||||||||||||||   ||||||||||||| || |||||| ||| |    
T  42043370 cttattgtcattagttctctaagatagcttatgaaaacaacttatatcatat-ccaaaaacaatttaactgcattttatcttttgctatagaaatagcat 42043468  T
Q  395 aagcaagcttata 407  Q
    | | |||||||||    
T  42043469 atgtaagcttata 42043481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 407
Target Start/End: Original strand, 25930552 - 25930690
Alignment:
Q  268 atgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgcca 367  Q
    |||||| | ||| ||||||||||||| |||| | ||| ||||||||||| ||  ||||| ||||||| ||| | |||||| |||||||| ||||||   |    
T  25930552 atgacacttttcgtaagcttttttcagcttactatcacaagttctccaagatagcttatgaaaacaatttaaagcatata-caaaaacattttaatttta 25930650  T
Q  368 ttttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
    ||| ||| |||||| |||||| |||||| | |||||||||    
T  25930651 tttcatcctttcctatagaaatagcttatgtaagcttata 25930690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 341
Target Start/End: Complemental strand, 1930153 - 1930034
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||| | | ||||||||||||    ||||||| ||||||||| | |||||||||| |||||| |||||||||| ||| || |||| ||     
T  1930153 acataagttttgtgacattatttgggagaacttgtgaaaacag-tttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagata 1930055  T
Q  321 acttataaaaacaacttataa 341  Q
     ||||| |||||| |||||||    
T  1930054 gcttatgaaaacagcttataa 1930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 12976281 - 12976206
Alignment:
Q  271 acaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    ||||| |||| |||||||||||| ||||||| ||||||||||| |||||  ||||||||||||| || || ||||||    
T  12976281 acaattttcaaaagcttttttcagcttattt-cataagttctctaatatagcttataaaaacaaattgtagcatata 12976206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 378
Target Start/End: Original strand, 13814712 - 13814803
Alignment:
Q  286 ttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctttt 378  Q
    |||||| || ||||||||| ||||| ||||||||   ||||||| ||||| |||||||| ||| |||||| ||||||||  ||||||||||||    
T  13814712 ttttttaaagttattttcacaagttttccaatatagtttataaagacaacatataacatgtac-aaaaactatttaatgttattttatctttt 13814803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 13822048 - 13822092
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagtt 310  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||    
T  13822048 ttatgacaatattcatatgcttttttcaagttattatcataagtt 13822092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 43504811 - 43504751
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||| |||||| ||||||| |||||||||||||| ||  |||||||||||| ||||||    
T  43504811 ataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttata 43504751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 9956832 - 9956891
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||| |||||||||||||||||||||| ||   |||| ||||||||||||||| ||||    
T  9956832 ttttcagcttattttcataagttctccaagatagattatgaaaacaacttataacttata 9956891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 353
Target Start/End: Complemental strand, 10114551 - 10114476
Alignment:
Q  278 tcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    ||||| ||| |||||| |||||||||||| ||||||||||||  || || |||||| |||||| | ||||||||||    
T  10114551 tcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttataccaaaa 10114476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 31716195 - 31716273
Alignment:
Q  237 actgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    ||||||| |||||||| |  |||||||||| |||||| | ||||||||||||||||| |||||||  |||| ||||||||    
T  31716195 actgtttcggagaacttttgaaaacagctt-atgacattcttcataagcttttttcagcttatttctataacttctccaa 31716273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 41596044 - 41595981
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||||||||||| |||||||  |||||| | |||||| |||| ||||||||| |||||    
T  41596044 ttcataagcttttttcaatttatttttgtaagtttttcaatataacttgtaaaaacaaattata 41595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 6525892 - 6525822
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaac 335  Q
    ||||||||||| ||||||| ||||   | |||| ||||||||||||||| |||||  ||||||||||||||    
T  6525892 tttatgacaattttcataaactttcaactacttgttttcataagttctcaaatatagcttataaaaacaac 6525822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 10120838 - 10120777
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    |||||||||| |||||| |  ||||| ||| |||||| |||||||||||||||||||||||||    
T  10120838 aaaacagctt-atgacatttatcatatgctgttttcagcttattttcataagttctccaatat 10120777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 333
Target Start/End: Original strand, 11407349 - 11407411
Alignment:
Q  271 acaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    ||||| |||| ||||||||||||||||||||| |||||||||  ||| | ||||||| |||||    
T  11407349 acaattttcacaagcttttttcaacttatttttataagttctttaatgtaacttatagaaaca 11407411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 42893500 - 42893534
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctcc 314  Q
    |||||||||||||| ||||||||||||||||||||    
T  42893500 ataagcttttttcagcttattttcataagttctcc 42893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 379
Target Start/End: Complemental strand, 38602391 - 38602295
Alignment:
Q  282 aagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttc 379  Q
    ||||| |||||  |||||||||| || ||||||| |||  |||||||||||| |||||| |||||  ||||| ||||||||   ||||||||||||||    
T  38602391 aagctgttttcggcttattttcacaaattctccagtatagcttataaaaacagcttatagcatat-gcaaaagcaatttaacttcattttatcttttc 38602295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 6525627 - 6525667
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaat 317  Q
    |||||||||| ||||||||||||||| ||||||| ||||||    
T  6525627 ttcataagctgttttcaacttatttttataagttttccaat 6525667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 20672813 - 20672757
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    |||||||||| |||||| |||||||||||||| ||||||  ||  ||||||||||||    
T  20672813 ttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 32975615 - 32975659
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagtt 310  Q
    |||||||| |||||||||||| ||||||| ||||||| |||||||    
T  32975615 ttatgacattattcataagctgttttcaaattatttttataagtt 32975659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 222 - 378
Target Start/End: Original strand, 16937836 - 16937990
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| | ||||||| ||||||    |||||||||| |||||||  ||||||||||||||||| ||||||||| |||||||||||||||      
T  16937836 cataagttttgtgagagtgtttggaagaacttatgaaaacagctt-atgacaaatttcataagcttttttcagcttattttcctaagttctccaatatag 16937934  T
Q  322 cttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctttt 378  Q
    | ||||||||||||||||| |||||| |||||||||||||| |  ||||||||||||    
T  16937935 cgtataaaaacaacttatagcatata-caaaaacaatttaacgttattttatctttt 16937990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 225 - 407
Target Start/End: Original strand, 16457935 - 16458114
Alignment:
Q  225 aagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgactt 324  Q
    |||||| |||| ||||||||||||||||    |||||||||| |||||| | |||||||||| ||||||  ||||||||| |||||||||||| |  ||     
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagctt-atgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctc 16458033  T
Q  325 ataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
    |||||||||||||||| |||||| |||||||||||||| |  |||||||||||| || || ||| |||||| |||||||||||    
T  16458034 ataaaaacaacttatagcatata-caaaaacaatttaa-gttattttatcttttgctataaaaatagcttatgcaagcttata 16458114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 225 - 407
Target Start/End: Complemental strand, 29925955 - 29925775
Alignment:
Q  225 aagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgactt 324  Q
    |||||| |||| || |||||||||||||    |||||||||| |||||||| |||||  | ||||||||||||||||||||||||||||||||||  |||    
T  29925955 aagttttgtgagaccgtttgggagaacttatgaaaacagctt-atgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagctt 29925857  T
Q  325 ataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
    ||  |||||||||||| || ||| || ||||||||||| || |||||||||||| || || ||| |||||| |||||| ||||    
T  29925856 atgtaaacaacttatagcacata-cagaaacaatttaacgctattttatcttttgctataaaaatagcttatgcaagcatata 29925775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 221 - 395
Target Start/End: Complemental strand, 10640071 - 10639899
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||||| ||||||||||||||    |||||||||| |||||| | ||||||||||||||  | |||||||||||||||||||||| ||     
T  10640071 acataagttttgtgatattgtttgggagaacttatgaaaacagctt-atgacatttttcataagctttttctagcttattttcataagttctccaaaata 10639973  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagctta 395  Q
      ||||  |||||||| || ||||||| |||||||||||||||   |||||||||||| || |||||| ||||||    
T  10639972 gtttatgtaaacaactcatcacatata-caaaaacaatttaatttaattttatcttttgctatagaaatagctta 10639899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 266 - 407
Target Start/End: Original strand, 25461643 - 25461782
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgc 365  Q
    ||||| |||| ||||||||||||  |||||||||||| |||||||||||||||   |||||||||||||||||||||||||| | ||| |||||||| |     
T  25461643 ttatggcaattttcataagctttgatcaacttattttaataagttctccaatagagcttataaaaacaacttataacatata-ctaaaccaatttaacga 25461741  T
Q  366 cattttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
     | |||||||||| || || ||| |||||| |||||||||||    
T  25461742 ta-tttatcttttgctataaaaatagcttatgcaagcttata 25461782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 341
Target Start/End: Original strand, 3735121 - 3735229
Alignment:
Q  232 gtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaa 331  Q
    |||||||||||||| ||||||    |||||||||| |||||||| |||| |||||||||||| ||||| |||||||||||||  |||| | |||||||||    
T  3735121 gtgatactgtttggtagaactgatgaaaacagctt-atgacaattttcaaaagcttttttcagcttatcttcataagttctcttatataatttataaaaa 3735219  T
Q  332 caacttataa 341  Q
    ||||||||||    
T  3735220 caacttataa 3735229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 358
Target Start/End: Complemental strand, 25461201 - 25461074
Alignment:
Q  229 ttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataa 328  Q
    ||||||||||||||||| |||||| |   || |||||| ||| |||| ||||||| | ||||||| ||||||||||| ||||||||||||   ||||| |    
T  25461201 ttcgtgatactgtttggtagaacttttggaatcagctt-atggcaattttcataaacgtttttcagcttattttcatcagttctccaatagagcttatga 25461103  T
Q  329 aaacaacttataacatataccaaaaacaat 358  Q
    ||||||||||||||||||| ||||||||||    
T  25461102 aaacaacttataacatata-caaaaacaat 25461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 37954768 - 37954689
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaactt 337  Q
    |||||||||| |||| ||| ||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  37954768 aaaacagctt-atgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaaacaactt 37954689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 32009764 - 32009684
Alignment:
Q  269 tgacaatattcataa-gcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    ||||||| ||||||| |||||||| ||||| |||||||||||||||||||||  ||||||||||||| ||||| |||||||    
T  32009764 tgacaattttcataaagcttttttgaacttgttttcataagttctccaatatagcttataaaaacaatttatagcatatac 32009684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 13697766 - 13697850
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||| |||||||||||||||||||||| |||||||| ||  ||||| |||||||||||||| |||||  ||||| |||||||    
T  13697766 ttcataagtttttttcaacttattttcataacttctccaacatagcttat-aaaacaacttataatatataaaaaaaaaaatttaa 13697850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 36227848 - 36227729
Alignment:
Q  286 ttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtag 385  Q
    |||||| ||||||||| |||||||||| ||||||  ||||||||| |||||||||   ||||| |||| |||||||| || |||||||||||| || ||     
T  36227848 tttttttaacttattt-cataagttcttcaatatagcttataaaagcaacttatattgtatac-aaaatcaatttaacgctattttatcttttgctataa 36227751  T
Q  386 aaacagcttaagcaagcttata 407  Q
    ||| || |||||||||||||||    
T  36227750 aaatagattaagcaagcttata 36227729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 12857701 - 12857765
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaa 330  Q
    |||||||||| |||| || ||||||||| |||||||||||||||||||||||||  |||||||||    
T  12857701 ttatgacaattttcacaaccttttttcagcttattttcataagttctccaatatagcttataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 24030413 - 24030493
Alignment:
Q  282 aagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||| ||||| | |||||||||||||||| || |||||  ||||||||||||||||||||||||| | ||||| |||||||    
T  24030413 aagcgttttttagcttattttcataagttatctaatatagcttataaaaacaacttataacatatccaaaaaataatttaa 24030493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 3932628 - 3932721
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctcca 315  Q
    ||||||| || |||| |||||||| || ||||  |||||||||||| |||| ||| |||||||||||||| || ||||||||| |||||||||||    
T  3932628 acataagctttgtgagactgtttgagaaaacttgcaaaaacagctt-atgataattttcataagctttttacagcttattttcgtaagttctcca 3932721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 221 - 331
Target Start/End: Complemental strand, 9107208 - 9107099
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||| | ||||||||||||||    |||||||||| | |||||| |||| || ||||||||  || ||||||||||||||||||||||     
T  9107208 acataagttttgtgagaatgtttgggagaactcatgaaaacagctt-aggacaattttcacaaacttttttctgctaattttcataagttctccaatata 9107110  T
Q  321 acttataaaaa 331  Q
    ||||| |||||    
T  9107109 acttacaaaaa 9107099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 27298127 - 27298056
Alignment:
Q  286 ttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatt 359  Q
    |||||||||||| | |||| ||||||||||||||  ||||||||||||||||||| ||||||  ||||||||||    
T  27298127 ttttttcaacttttcttcacaagttctccaatatatcttataaaaacaacttatagcatata--aaaaacaatt 27298056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 35446148 - 35446080
Alignment:
Q  246 gagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctcca 315  Q
    ||||||| || ||||||| ||||||||| | ||| ||||||||||||| |||||||||||||||||||||    
T  35446148 gagaactttcgaaaacag-tttatgacatttttcgtaagcttttttcagcttattttcataagttctcca 35446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 42500242 - 42500290
Alignment:
Q  270 gacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  42500242 gacaattttcataagctttt-tcaacttattttcataagttctccaatat 42500290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 12857334 - 12857398
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaa 330  Q
    |||||||||| |||| |||||||||||| ||||||||  |||||||||||||||  |||||||||    
T  12857334 ttatgacaattttcacaagcttttttcagcttatttttgtaagttctccaatatagcttataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 34102338 - 34102405
Alignment:
Q  294 acttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||| ||||||| |||||||||| ||| ||||||||||||||||||| |||||| ||||||||| ||||    
T  34102338 acttgttttcatgagttctccaacatggcttataaaaacaacttatagcatata-caaaaacaaattaa 34102405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 4014431 - 4014493
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttat 339  Q
    |||||||||| |||||| |||||||||||||||||||||| ||  ||||| |||||| |||||    
T  4014431 ttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 43300938 - 43300864
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaa 354  Q
    |||||| | ||||| |||||||||||||||||||||| ||  |||| ||||||||||||||  |||||| |||||    
T  43300938 ataagcatgtttcagcttattttcataagttctccaagatagcttacaaaaacaacttataggatatacaaaaaa 43300864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 362
Target Start/End: Complemental strand, 2568739 - 2568636
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||| |||||||||| | |||| | ||||||||||| || ||||||  ||  ||||| ||||||||||||| | ||||| |||||||    
T  2568739 aaaacagctt-atgaca-tattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacgaaaaaca 2568642  T
Q  357 atttaa 362  Q
    ||||||    
T  2568641 atttaa 2568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 354
Target Start/End: Complemental strand, 7907948 - 7907867
Alignment:
Q  273 aatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaa 354  Q
    |||||||||||| | |||||| |||| ||||||||| ||||||| |   ||||| ||||||||||||||| ||||| |||||    
T  7907948 aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatacaaaaaa 7907867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 9202744 - 9202817
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttat 339  Q
    |||||||| | |||||||||| ||| || |||||||||||||||||| ||| || |||||| |||||| |||||    
T  9202744 ttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttat 9202817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 362
Target Start/End: Complemental strand, 39105546 - 39105443
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||| | |||||||||| |||| | |||||||||||||||||||||| ||  ||||| ||||||  ||||| | |||| | ||||||    
T  39105546 aaaacagctt-atgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttata-cgaaaaca 39105449  T
Q  357 atttaa 362  Q
    ||||||    
T  39105448 atttaa 39105443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 353
Target Start/End: Original strand, 6587114 - 6587190
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||||| ||| || |||||||||| |||||||||| |||  ||||| ||||||||||||| | ||||| ||||    
T  6587114 ttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagcttatacgaaaa 6587190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 36318833 - 36318757
Alignment:
Q  281 taagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaa 357  Q
    |||||| |||||| ||||||| ||||| |||||||| ||  ||||| ||||||||||| ||| ||||| ||||||||    
T  36318833 taagctgttttcagcttatttacataaattctccaagatagcttatgaaaacaacttaaaacttatacaaaaaacaa 36318757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 36797065 - 36797141
Alignment:
Q  239 tgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctcca 315  Q
    ||||| ||||||||   ||||||| |||| ||||||| ||||||||||||||||  ||||||||  |||||||||||    
T  36797065 tgttttggagaacttataaaaacaactttctgacaattttcataagcttttttcggcttattttagtaagttctcca 36797141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 706538 - 706471
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaac 332  Q
    ||||||||| | |||||||||| |||||| |||||||| ||| | || ||||||| ||||||||||||    
T  706538 tttatgacattgttcataagctattttcagcttattttgataggatcaccaatataacttataaaaac 706471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 42582975 - 42582912
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||| || |||| | |||||||||||||||||||||||||  |||| ||||||| ||||||    
T  42582975 ttcataaactgttttgagcttattttcataagttctccaatatagcttacaaaaacagcttata 42582912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 362
Target Start/End: Complemental strand, 12425623 - 12425550
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||||||||||||||||||| ||  ||| | |||||| |||||| | |||| | ||||||||||||    
T  12425623 ttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttata-cgaaaacaatttaa 12425550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 353
Target Start/End: Original strand, 10272449 - 10272514
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||| |||||||||||||  ||||||| ||| ||||| ||||||||||||| | ||||| ||||    
T  10272449 ttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaa 10272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 15074758 - 15074819
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||| |||||| ||||||| |||||| | |||| ||| |||||| |||||||||||||    
T  15074758 cataagctgttttcagcttatttccataagctttccagtataacttatgaaaacaacttata 15074819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 37588370 - 37588430
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||| |||||| ||||||| |||||| ||||||  || |||||| |||||||||||||    
T  37588370 ataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttata 37588430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 39980792 - 39980708
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |  ||||||||||||||    
T  39980792 ttcataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcatgt-tcaaaaacaatttaa 39980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 378
Target Start/End: Complemental strand, 901985 - 901887
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctttt 378  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||  |||||||||||  ||||| ||| |||||  ||||||||||||    
T  901985 cataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaaagtataacatata-taaaaataatataatgttattttatctttt 901887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 376
Target Start/End: Complemental strand, 30443975 - 30443858
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||   ||||||||||| |||||| |||||| ||||| ||    
T  30443975 aaaacagctt-atgacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatata-caaaagca 30443878  T
Q  357 atttaatgccattttatctt 376  Q
    ||||||   |||||||||||    
T  30443877 atttaacttcattttatctt 30443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 47132391 - 47132309
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaat 363  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||| |||||||||||||||    
T  47132391 ataagcttttttcaacttattttcataacttctccaatatagcttataaaaacaacctatagcatata-caaaaacaatttaat 47132309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 403
Target Start/End: Complemental strand, 20170586 - 20170461
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctt 376  Q
    ||||||||||||||||||||||||||||| ||||||| || || |||| ||||||||||||||| |||||| ||||||||||||||    ||||||||||    
T  20170586 ttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatata-caaaaacaatttaacattattttatctt 20170488  T
Q  377 ttcctgtagaaacagcttaagcaagct 403  Q
    || | ||| ||| |||||  |||||||    
T  20170487 ttgcagtaaaaatagcttgtgcaagct 20170461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 222 - 348
Target Start/End: Original strand, 13715525 - 13715652
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    |||| |||| |||| ||||||||| ||||||  | |||||||||| |||||||  ||||||||| |||||||||||||||||||||||| ||||||||      
T  13715525 catatgttttgtgagactgtttggtagaacttcctaaaacagctt-atgacaactttcataagcatttttcaacttattttcataagttgtccaatatcg 13715623  T
Q  322 ct--tataaaaacaacttataacatatac 348  Q
    ||  ||||||||||||||||| |||||||    
T  13715624 cttatataaaaacaacttatatcatatac 13715652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 362
Target Start/End: Complemental strand, 20880558 - 20880455
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||  ||| ||||||||  ||||| |||||| ||||||||    
T  20880558 aaaacagctt-atgacaattttcataagcttttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatata-caaaaaca 20880461  T
Q  357 atttaa 362  Q
    ||||||    
T  20880460 atttaa 20880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 266 - 407
Target Start/End: Original strand, 36631047 - 36631187
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgc 365  Q
    ||||||| || |||| |||||||||||  |||||||||||||||||||||||||  || |||||||||||||||| ||| || ||||||||||||||       
T  36631047 ttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgta-caaaaacaatttaactt 36631145  T
Q  366 cattttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
     | |||||| ||| || |||||| ||||||||| || |||||    
T  36631146 tactttatcctttactatagaaatagcttaagcgagtttata 36631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 37689336 - 37689212
Alignment:
Q  232 gtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaa 331  Q
    |||||||||| ||||||||||    |||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||  |||| ||| |||||||    
T  37689336 gtgatactgtatgggagaacttaagaaaacagctt-atgacaattttca-aagcttttttcaacttattttcataagtgctctgatat-actcataaaaa 37689240  T
Q  332 caacttataacatataccaaaaacaattt 360  Q
    |||| |||| |||||| ||||||||||||    
T  37689239 caacctatagcatata-caaaaacaattt 37689212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 405
Target Start/End: Original strand, 53789457 - 53789595
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgc 365  Q
    |||||||| | ||||||||||||||||| |||| ||||||||||||||||  ||  ||||| | ||||||||||| |||||||| |||||| ||||||      
T  53789457 ttatgacacttttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagcatatacc-aaaacattttaattt 53789555  T
Q  366 cattttatcttttcctgtagaaacagcttaagcaagctta 405  Q
     | || |||||||||| |||||| |||||| | |||||||    
T  53789556 tagttcatcttttcctatagaaatagcttatgtaagctta 53789595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 4401126 - 4401034
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||||| |||||||| | |||||||| |||| ||||||||||||||||||||||||||| ||||   ||||||||||||| ||||||| ||||    
T  4401126 aaaacagctt-atgacaatttccataagctgtttttaacttattttcataagttctccaatataactt---aaaacaacttatagcatatacgaaaa 4401034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 340
Target Start/End: Complemental strand, 21367784 - 21367667
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||  ||||||||||||||||    |||||||||| |||||| | |||| ||||| |||||| |||||||||||||||||||||| ||      
T  21367784 cataagttttgtgggactgtttgggagaacttatgaaaacagctt-atgacattgttcacaagctgttttcagcttattttcataagttctccaagatag 21367686  T
Q  322 cttataaaaacaacttata 340  Q
    ||||| |||||||||||||    
T  21367685 cttatgaaaacaacttata 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 46478763 - 46478710
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  46478763 ttatgacagttttcataagcttttttcaacttattttcataagttctccaatat 46478710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 407
Target Start/End: Original strand, 18405838 - 18405968
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctt 376  Q
    ||||||| ||||||  | |||| ||||||||||||||||| ||  ||||| ||||||||||||| ||||||| ||||| |||| || |  ||||||||||    
T  18405838 ttcataatctttttcaagcttaatttcataagttctccaagatagcttatgaaaacaacttatagcatatacaaaaaaaaattcaacgatattttatctt 18405937  T
Q  377 ttcctgtagaaacagcttaagcaagcttata 407  Q
    ||||| || ||| | |||| | |||||||||    
T  18405938 ttcctatataaataacttatgtaagcttata 18405968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 35696298 - 35696244
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaa 334  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  35696298 ataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaa 35696244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 4526375 - 4526444
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatat 346  Q
    |||||||||| |||| || ||||||||||||||||| ||| || |||||||||||||||||||| |||||    
T  4526375 ttcataagctgtttttaagttattttcataagttcttcaaaataacttataaaaacaacttatagcatat 4526444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 362
Target Start/End: Complemental strand, 20257653 - 20257514
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttatttt-cataagttctccaatatg 320  Q
    ||||| ||| |||| ||||||||||||||||    ||| |||||  |||||||| |||||||| |||||  |||||||||| |||||| ||||||||||     
T  20257653 cataaattttgtgagactgtttgggagaacttatgaaagcagcta-atgacaattttcataagttttttaaaacttatttttcataagctctccaatata 20257555  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
     |||  |||||||||||||| |||||| ||||||||||||||    
T  20257554 gcttcaaaaaacaacttatagcatata-caaaaacaatttaa 20257514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 31365141 - 31365225
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataa 307  Q
    ||||||||| |||| ||||||||||||||||    ||| |||||| |||||||| |||||||||||||||||||| ||||||||||    
T  31365141 cataagttttgtgagactgtttgggagaacttatgaaagcagctt-atgacaattttcataagcttttttcaactcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 405
Target Start/End: Original strand, 12862281 - 12862381
Alignment:
Q  303 cataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagc 402  Q
    |||||||||||||||||  ||||| ||||||||||||| |||||||  ||||||||||||  | |||||||||||| || || ||| || ||| ||||||    
T  12862281 cataagttctccaatatagcttatgaaaacaacttatagcatatac--aaaacaatttaaatctattttatcttttgctataaaaatagattatgcaagc 12862378  T
Q  403 tta 405  Q
    |||    
T  12862379 tta 12862381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 35959454 - 35959580
Alignment:
Q  268 atgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgcca 367  Q
    |||||||| |||| |||||||||||| |||||||||| || ||||| |||||  |||||| |||||||||| | |||||| |||||| |||||||    |    
T  35959454 atgacaattttcaaaagcttttttcagcttattttcaaaaattctctaatatagcttatagaaacaacttacagcatata-caaaaataatttaacttta 35959552  T
Q  368 ttttatcttttcctgtagaaacagctta 395  Q
    ||||||| ||| || |||||| ||||||    
T  35959553 ttttatccttttctatagaaatagctta 35959580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 362
Target Start/End: Complemental strand, 36189610 - 36189545
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||||||||||||||  |||||||||| | |||||| |||||| ||||||||||||||    
T  36189610 ttattttcataagttctccaatatatcttataaaaatagcttatatcatata-caaaaacaatttaa 36189545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 25348905 - 25348828
Alignment:
Q  277 ttcataagctttttt-caacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    ||||||||||||||| ||||||| |||| |||||||||||| || |||| | ||||||| ||||||||||||| ||||    
T  25348905 ttcataagctttttttcaacttaatttcgtaagttctccaagattacttttgaaaacaaattataacatatacaaaaa 25348828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 466300 - 466217
Alignment:
Q  232 gtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||| ||||||||||| ||||  ||||||||||||| | ||| | ||| ||||||||||| | ||||||||||||||||||||||    
T  466300 gtgagactgtttgggataacttacaaaaacagcttt-taacatttttcttaagctttttttagcttattttcataagttctccaa 466217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 378
Target Start/End: Original strand, 49034291 - 49034370
Alignment:
Q  298 attttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctttt 378  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| |||||  || ||||||||||| |  ||||||||||||    
T  49034291 attttcagaagttctccaatatagcttataaaaacaacttatagcatat-gcacaaacaatttaacggtattttatctttt 49034370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 36887567 - 36887504
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||| | |||||| |||||||||||||||||| ||| ||| ||||| |||||||||||||    
T  36887567 ttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaacttata 36887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 49556940 - 49556862
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaact 336  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |  |||| ||||| |||  | |||||||||||||    
T  49556940 aaaacagctt-atgacaattttcataagcttttttcaacttatttcctcaagtcctccagtatagcctataaaaacaact 49556862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 378
Target Start/End: Original strand, 51929353 - 51929467
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatacca--aaaacaatttaat 363  Q
    |||||||||| |||||| |||||||||| || | | ||||||||| |  |||||  |||| ||||| |||||||| ||||||  |  |||||||||||||    
T  51929353 ttatgacaattttcataggcttttttcatctcactatcataagttataaaatatagcttagaaaaaaaacttatagcatataatagaaaaacaatttaat 51929452  T
Q  364 gccattttatctttt 378  Q
    || ||||||||||||    
T  51929453 gctattttatctttt 51929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 362
Target Start/End: Original strand, 402510 - 402633
Alignment:
Q  237 actgtttgggagaac-tatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaac 335  Q
    ||||||||||||||| ||| |||| |||||| |||||| | |||||||||| |||||| |||| ||||| ||||||| ||| ||   ||||||||||| |    
T  402510 actgtttgggagaacgtatgaaaa-cagctt-atgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagc 402607  T
Q  336 ttataacatataccaaaaacaatttaa 362  Q
    ||||||| |||| | ||||||||||||    
T  402608 ttataacttata-cgaaaacaatttaa 402633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 43062764 - 43062699
Alignment:
Q  267 tatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    |||| |||| |||| |||||||||||| ||| ||||||||||||||||||||| |||| ||||||||    
T  43062764 tatggcaattttcacaagcttttttcagcttcttttcataagttctccaatat-acttgtaaaaaca 43062699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 3845572 - 3845625
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    |||| ||||||||| |||||||||||||||||||||| || |||||| ||||||    
T  3845572 ataatcttttttcagcttattttcataagttctccaagataacttatgaaaaca 3845625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 31365262 - 31365358
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    ||||| ||| |||| ||||||||||||||||    || ||||||| |||||||| |||||||   |||||||||| |||||||||| |||||||||||    
T  31365262 cataatttttgtgacactgtttgggagaacttatgaatacagctt-atgacaattttcataaatctttttcaactcattttcataaattctccaatat 31365358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 46031063 - 46031014
Alignment:
Q  267 tatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    ||||||| |||||||||||| |||||| |||||||| |||||||||||||    
T  46031063 tatgacattattcataagctgttttcagcttattttaataagttctccaa 46031014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 47587519 - 47587451
Alignment:
Q  289 tttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaat 358  Q
    |||||||| |||||| |||||  ||||||||   ||||||||||||||||||||||||| ||||||||||    
T  47587519 tttcaactaattttcttaagtcatccaatatagtttataaaaacaacttataacatata-caaaaacaat 47587451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 35394493 - 35394561
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    ||||||||| | |||||||||| |||||||||||||||||||| |||| ||| ||  ||||| ||||||    
T  35394493 tttatgacattgttcataagctgttttcaacttattttcataaattcttcaagatagcttatgaaaaca 35394561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 39602228 - 39602288
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    |||||||||||||||||||||||||| || ||  ||||| |||||| |||||||| |||||    
T  39602228 ttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataacttatac 39602288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 7301402 - 7301363
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaa 316  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  7301402 ttcataaacttttttcaacttattttcacaagttctccaa 7301363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 312
Target Start/End: Original strand, 9832707 - 9832797
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttct 312  Q
    |||||||||| || | |||||||||||||||| |  |||||||||| ||| |  | ||||||| ||||||||||||||| || |||||||||    
T  9832707 acataagttttgtcaaactgtttgggagaacttttgaaaacagctt-atgccttttttcataaacttttttcaacttatatttataagttct 9832797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 19983837 - 19983791
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgactt 324  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  19983837 ttcataagcttttt-caacttattttcataagttctccgatataactt 19983791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 30956659 - 30956761
Alignment:
Q  303 cataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagc 402  Q
    |||||||||||||| ||  ||| | ||||||||||||| | ||||| |||||||||||||    |||||||||||| || |||||| |||||| | ||||    
T  30956659 cataagttctccaagatagcttttgaaaacaacttatagcctatac-aaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagc 30956757  T
Q  403 ttat 406  Q
    ||||    
T  30956758 ttat 30956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 30972471 - 30972573
Alignment:
Q  303 cataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagc 402  Q
    |||||||||||||| ||  ||| | ||||||||||||| | ||||| |||||||||||||    |||||||||||| || |||||| |||||| | ||||    
T  30972471 cataagttctccaagatagcttttgaaaacaacttatagcctatac-aaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagc 30972569  T
Q  403 ttat 406  Q
    ||||    
T  30972570 ttat 30972573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 43015619 - 43015666
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttct 312  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  43015619 tttattacaatgttcataaacttttttcaacttgttttcataagttct 43015666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 3044266 - 3044304
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctcca 315  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  3044266 ttcataagctgttttcaacttattttcataagctctcca 3044304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 25925805 - 25925767
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctcca 315  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  25925805 ttcataagctgttttcaacttattttcataagctctcca 25925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 319
Target Start/End: Original strand, 28795852 - 28795902
Alignment:
Q  269 tgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    ||||||| ||| |||||| |||||| ||||||||||||||||||| |||||    
T  28795852 tgacaattttcttaagctcttttcagcttattttcataagttctctaatat 28795902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 33972743 - 33972797
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    ||||| ||||||||| |||||||||| ||||||||||| ||  ||||||||||||    
T  33972743 cataaccttttttcagcttattttcacaagttctccaaaatagcttataaaaaca 33972797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 35574864 - 35574913
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||||||| |||||||| |||||||  ||||||||||||||||||||||    
T  35574864 ttatgacaattttcataag-ttttttctgcttattttcataagttctccaa 35574913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 944593 - 944517
Alignment:
Q  301 ttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatctttt 378  Q
    ||||||||||||||||| |  |||||||||||||| ||||||||| | | |||| |||||||||  |||| |||||||    
T  944593 ttcataagttctccaatttagcttataaaaacaacatataacataaatc-aaaataatttaatgttatttcatctttt 944517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 26911667 - 26911619
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcata 306  Q
    |||||||||| |||||||| |||||||| |||||||||||||||| ||||    
T  26911667 aaaacagctt-atgacaattttcataagtttttttcaacttatttccata 26911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 26990502 - 26990535
Alignment:
Q  281 taagcttttttcaacttattttcataagttctcc 314  Q
    ||||||||||||| ||||||||||||||||||||    
T  26990502 taagcttttttcagcttattttcataagttctcc 26990535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 49092820 - 49092771
Alignment:
Q  299 ttttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    ||||||||||||||| |||||  ||||||||||||||||| | |||||||    
T  49092820 ttttcataagttctctaatatagcttataaaaacaacttacagcatatac 49092771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 50600191 - 50600248
Alignment:
Q  283 agcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||| |||||| |||||||||||||||||||||||||  || || |||||| ||||||    
T  50600191 agctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttata 50600248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 1141253 - 1141213
Alignment:
Q  286 ttttttcaacttattttcataagttctccaatatgacttat 326  Q
    |||||||| |||||||||||||||||| |||||| ||||||    
T  1141253 ttttttcaccttattttcataagttcttcaatataacttat 1141213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 1816646 - 1816570
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||| ||| |||||| |||||||| ||||| |||||| |||  ||||| ||||||||||||| | ||||| ||||    
T  1816646 ttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaa 1816570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 5391942 - 5391910
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagt 309  Q
    |||||||||| ||||||||||||||||||||||    
T  5391942 ttcataagctgttttcaacttattttcataagt 5391910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 406
Target Start/End: Original strand, 16072993 - 16073178
Alignment:
Q  221 acataagtttcgtgatactgttt--gggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaata 318  Q
    |||||||||| |||||||| |||  | |||||||   |||||||| ||||||||| | ||||| || ||| |  | ||||||||||| | |||| ||| |    
T  16072993 acataagttttgtgatactttttttgagagaacttgtaaaaacag-tttatgacatttttcatgagttttatatagcttattttcatcaattcttcaaga 16073091  T
Q  319 tgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagcttat 406  Q
    | |||||| || ||| ||||||||||||| ||||||| ||||||    |||||| ||||| || |||||| |||||| ||||| ||||    
T  16073092 taacttatgaagacagcttataacatata-caaaaactatttaaattaattttaacttttgctatagaaatagcttatgcaagattat 16073178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 22203474 - 22203430
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    ||||||||||||||||||||| ||  ||||| |||||||||||||    
T  22203474 ttattttcataagttctccaagatagcttatgaaaacaacttata 22203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 32582807 - 32582751
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    |||| ||| |||||||||||||||| |||||||||||||| ||  ||||| ||||||    
T  32582807 ttcaaaagattttttcaacttatttccataagttctccaaaatagcttatgaaaaca 32582751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 44747418 - 44747478
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||| ||||| |||||||||||||||| ||||| ||  ||||| |||||| ||||||    
T  44747418 ataagcttctttcagcttattttcataagttttccaagatagcttatgaaaacagcttata 44747478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 19302551 - 19302650
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||    |||  |||||||||||||||||||||||||| ||||||||    
T  19302551 aaaacagctt-atgacaattttcataaacttttttcaacttattttcataagttct----tatagcttataaaaacaacttataacatata-caaaaaca 19302644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 265 - 348
Target Start/End: Original strand, 38138474 - 38138557
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||||  || |||||||||||||||| |||||||    
T  38138474 tttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatac 38138557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 266 - 403
Target Start/End: Original strand, 19022581 - 19022717
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgc 365  Q
    |||||||||| |||||||| | | ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||   |||||||||||| |     
T  19022581 ttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcattta-ttaaaacaatttaaagt 19022679  T
Q  366 cattttatcttttcctgtagaaacagcttaagcaagct 403  Q
      |||||||||||    |||||| ||||||||||||||    
T  19022680 tcttttatcttttatgatagaaatagcttaagcaagct 19022717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 221 - 359
Target Start/End: Complemental strand, 34744146 - 34744010
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    ||||||| || |||| ||||||||| |||||||   |||| | ||| |||||||| |||| |||||||||||  |||||||| ||||||||||||||||     
T  34744146 acataagatttgtgagactgtttggaagaactaatgaaaagaactt-atgacaattttcacaagcttttttcgccttatttttataagttctccaatata 34744048  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatt 359  Q
     ||||| ||||||||||||| |||||| |||||||||||    
T  34744047 gcttatgaaaacaacttataccatata-caaaaacaatt 34744010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 46280284 - 46280363
Alignment:
Q  282 aagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||||| | |||||||||||||||||||||||  |||||||||||| |||||| |||||| ||||||||||||||    
T  46280284 aagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatata-caaaaacaatttaa 46280363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 407
Target Start/End: Complemental strand, 420467 - 420294
Alignment:
Q  232 gtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaa 331  Q
    |||| ||||||||||||||||    ||||||  ||||||||| | |||  |||| |||||||||||||||||||||||||||||||||  ||||   |||    
T  420467 gtgagactgtttgggagaacttatgaaaacaa-tttatgacagttttctaaagcctttttcaacttattttcataagttctccaatatagcttacggaaa 420369  T
Q  332 caacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagcttaagcaagcttata 407  Q
    ||||||||| |||||| ||||||||||| ||    |||||||||||| || || | | |||||| |||||||||||    
T  420368 caacttatagcatata-caaaaacaattgaacattattttatcttttgctataaacatagcttatgcaagcttata 420294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 340
Target Start/End: Original strand, 19214354 - 19214476
Alignment:
Q  217 acatacataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||| ||||||||| |||| | ||||||||||||||    ||||||||   |||||||| ||||||| ||| |||||||||||||||||||||||| |||    
T  19214354 acatgcataagttttgtgagattgtttgggagaacttatgaaaacagcaa-atgacaattttcataaacttgtttcaacttattttcataagttctacaa 19214452  T
Q  317 tatgacttataaaaacaacttata 340  Q
    |||  |||||| ||||||||||||    
T  19214453 tatagcttatacaaacaacttata 19214476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 17944330 - 17944434
Alignment:
Q  256 aaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaac 355  Q
    ||||||||||| |||||| | |||||| |||||||||| |||| |||||||| || ||||| || |||||| ||||||||||| |||||||| |||||||    
T  17944330 aaaaacagctt-atgacacttttcatatgcttttttcagcttaatttcataaattatccaagataacttatgaaaacaacttacaacatata-caaaaac 17944427  T
Q  356 aatttaa 362  Q
    |||||||    
T  17944428 aatttaa 17944434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 334
Target Start/End: Original strand, 21568458 - 21568559
Alignment:
Q  232 gtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaa 331  Q
    |||| ||||||||||||||||    |||||||||| || ||||| |||||||||| ||||||||||| || |||||||||||||||||  ||||||||||    
T  21568458 gtgagactgtttgggagaacttatgaaaacagctt-ataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaaa 21568556  T
Q  332 caa 334  Q
    |||    
T  21568557 caa 21568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 395
Target Start/End: Complemental strand, 48470162 - 48469990
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    ||||||||||  ||| | ||||||||||||||    |||||||||| ||| || | ||||||||||||||| | ||||| |||||||||| | ||| ||     
T  48470162 acataagttttatgagattgtttgggagaacttatgaaaacagctt-atggcatttttcataagcttttttgagcttatgttcataagttattcaaaata 48470064  T
Q  321 acttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagctta 395  Q
     ||||| |||||||||||||  ||||| ||||||||||||||    |||||||||||| ||||||||| ||||||    
T  48470063 gcttatgaaaacaacttatattatata-caaaaacaatttaacttaattttatcttttgctgtagaaatagctta 48469990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 11619154 - 11619222
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaa 334  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||  |  |||||||||||||    
T  11619154 ttatgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaacaa 11619222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 362
Target Start/End: Complemental strand, 45338522 - 45338428
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||| || || || |||||||||||||||||||| |||||||||||||  |||| |||||||||||| | |||||| ||||||||||||||    
T  45338522 ttatgacaatttttattagtttttttcaacttattttcatcagttctccaatatagctta-aaaaacaacttacagcatata-caaaaacaatttaa 45338428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 395
Target Start/End: Complemental strand, 119954 - 119856
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagctta 395  Q
    ||||||||| |||||||| ||| | |||||||||||||||||||| ||| || || |||||||||||    |||||||||||||||||||||| ||||||    
T  119954 ttattttcacaagttctctaatgtaacttataaaaacaacttatagcattta-cacaaacaatttaactttattttatcttttcctgtagaaatagctta 119856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 3928005 - 3928052
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttct 312  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3928005 tttatgacaattttcataagcttttttcaacttattttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 20269633 - 20269555
Alignment:
Q  283 agcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||||||||||||||| ||||||||||   ||||  ||||||||||||||||| || ||||||||||||||    
T  20269633 agcttttttcaacttattttcataaattctccaatacagcttagtaaaacaacttataacattta-caaaaacaatttaa 20269555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 377
Target Start/End: Complemental strand, 31744362 - 31744273
Alignment:
Q  287 tttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttt 377  Q
    |||||||||||||||||||||||||| ||||||   ||||||||  |||||| | ||||| ||||||||||||||| || |||||||||||    
T  31744362 tttttcaacttattttcataagttcttcaatatagtttataaaattaacttaaagcatat-ccaaaaacaatttaacgctattttatcttt 31744273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 30570919 - 30571022
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||||| |||||||||||||||||  ||| |||||||||||||||||| |   ||||||||| | |||||| |||||| |||||| |    
T  30570919 aaaacagctt-atgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaatagcttatagcatata-caaaaata 30571016  T
Q  357 atttaa 362  Q
    ||||||    
T  30571017 atttaa 30571022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 39629945 - 39630021
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaa 334  Q
    |||||||||| |||||||| |||||||||||||||||||||||  ||||||||||| ||||||  |||| ||||||||    
T  39629945 aaaacagctt-atgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagcttaaaaaaacaa 39630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 362
Target Start/End: Original strand, 15309562 - 15309656
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||| ||||| |||||| ||||||| || ||||||||||||| |||||| | || |||||| ||||||||||| |||||||| ||||||||||||||    
T  15309562 ttatcacaattttcatatgctttttgca-cttattttcataaattctccgaaataacttatgaaaacaacttaaaacatata-caaaaacaatttaa 15309656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 362
Target Start/End: Original strand, 40252107 - 40252198
Alignment:
Q  270 gacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||| ||| ||||||| | ||| |||||||||||||||||||||| || |||||| |||| | ||||||||||||| ||||||| ||||||    
T  40252107 gacaattttcgtaagcttctatcagcttattttcataagttctccaagataacttatgaaaagagcttataacatata-caaaaacgatttaa 40252198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 407
Target Start/End: Original strand, 4970819 - 4970924
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaatgccattttatcttttcctgtagaaacagctta 395  Q
    |||||||||||||||||| |||||  |||||||||| |||||||| |||||| ||||||||||||      |||||||||||| || |||||| ||||||    
T  4970819 ttattttcataagttctctaatatatcttataaaaagaacttatagcatata-caaaaacaattt-----tattttatcttttgctatagaaatagctta 4970912  T
Q  396 agcaagcttata 407  Q
     | |||||||||    
T  4970913 tgtaagcttata 4970924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 21196342 - 21196271
Alignment:
Q  267 tatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaactta 338  Q
    ||||||||| |||||| |||||||| ||||||||||| |||||||| |||||   |||||||||||||||||    
T  21196342 tatgacaattttcatatgctttttttaacttattttcttaagttctgcaataaagcttataaaaacaactta 21196271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 38499885 - 38499959
Alignment:
Q  241 tttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||||||||| |  |||||||||| |||||| | |||||||||||||| || ||||||||||||||||||||||    
T  38499885 tttgggagaacttttcaaaacagctt-atgacatttttcataagctttttccagcttattttcataagttctccaa 38499959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 5569658 - 5569719
Alignment:
Q  292 caacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||||||||| |||||| ||| || |||||| ||||||||||||||| ||||||||||    
T  5569658 caacttattttcattagttcttcaagataacttatgaaaacaacttataacttataccaaaa 5569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 40377840 - 40377943
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    ||||||||||| |||| || || |||||||||||| |  ||||||||||||||||||||||||   |||| ||||||||||  |||||||| |||||| |    
T  40377840 aaaacagcttt-tgactattttaataagcttttttgagtttattttcataagttctccaatataggttatgaaaacaacttgcaacatata-caaaaaga 40377937  T
Q  357 atttaa 362  Q
    ||||||    
T  40377938 atttaa 40377943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 353
Target Start/End: Complemental strand, 49019987 - 49019855
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaacta-tcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    ||||| |||| |||| ||||||||||||||||  |  |||| ||||| |||| ||| |||| || ||||||||   ||||||||||||||||| ||||||    
T  49019987 acatatgttttgtgagactgtttgggagaacttgtggaaaaaagctt-atgaaaattttcacaatcttttttcggtttattttcataagttctacaatat 49019889  T
Q  320 gacttataaaaacaacttataacatataccaaaa 353  Q
     ||||||||||| | |||||| ||||||| ||||    
T  49019888 aacttataaaaatagcttatagcatatacaaaaa 49019855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 44822011 - 44821940
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaattt 360  Q
    ||||||||||||||||||||||||||||  ||  ||||| |||||| |||||||| |||| ||||||||||||    
T  44822011 ttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttata-caaaaacaattt 44821940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 362
Target Start/End: Complemental strand, 39280023 - 39279941
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||||| |||||||||| ||||||||||| || | |||| ||| || | ||||||||||| || |||||||||||    
T  39280023 cataagcttttttcagcttattttcaaaagttctccaagataatttatgaaatcagcctataacatata-cacaaacaatttaa 39279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 43694595 - 43694661
Alignment:
Q  295 cttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||||||||||||||||| | ||||  |||||||||||| |||||| |||||| ||||||||||||||    
T  43694595 cttattttcataagttcttcgatatagcttataaaaacagcttatagcatata-caaaaacaatttaa 43694661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 348
Target Start/End: Original strand, 27863678 - 27863803
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatga 321  Q
    ||||||||| |||| ||| |||| |||||||    |||||||||| | || ||| |||| || ||||||||| ||||| ||||||||||||| |||||      
T  27863678 cataagttttgtgagactatttgagagaacttatgaaaacagcttga-gaaaattttcaaaaacttttttcagcttatgttcataagttctctaatatag 27863776  T
Q  322 cttataaaaacaacttataacatatac 348  Q
     |||| ||||||||||||| |||||||    
T  27863777 tttattaaaacaacttatagcatatac 27863803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 354
Target Start/End: Complemental strand, 45593646 - 45593513
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaactt-attttcataagttctccaatat 319  Q
    ||||||| || |||| ||||||||||||||||   ||||||| ||  |||||| | |||||||||||||||| | || |||||| |||||||||||| ||    
T  45593646 acataagctttgtgagactgtttgggagaacttataaaaacatctg-atgacatttttcataagcttttttccagtttattttcgtaagttctccaagat 45593548  T
Q  320 gacttataaaaacaacttataacatataccaaaaa 354  Q
      |||| ||||| | |||||| ||||||| |||||    
T  45593547 agcttagaaaaatagcttatagcatatacaaaaaa 45593513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 340
Target Start/End: Original strand, 45790422 - 45790495
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||| || | ||||||||| || |||||||||||||||| ||||||||   ||||||||||||||||||    
T  45790422 ttatgacaatttttaaaagcttttt-cagcttattttcataagttatccaatatagtttataaaaacaacttata 45790495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 23989531 - 23989572
Alignment:
Q  277 ttcataagcttttttcaactta-ttttcataagttctccaat 317  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  23989531 ttcataagcttttttcaacttatttttcataagttctccaat 23989572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 28341053 - 28341133
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||||||| |||| ||||||||| || ||||||| ||||||||||| |||||   ||||| |||||||||||| ||||||    
T  28341053 ttatgacaattttcaaaagctttttccagcttattt-cataagttctctaatatagtttatacaaacaacttatagcatata 28341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 362
Target Start/End: Original strand, 33601398 - 33601500
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||| | ||||||||||||||||| ||||  ||||||||||||| || ||  ||||| ||||||||||||| || ||| |||||| |    
T  33601398 aaaacagctt-atgacacttttcataagcttttttcagcttaaattcataagttctctaagatagcttat-aaaacaacttatagcaaata-caaaaata 33601494  T
Q  357 atttaa 362  Q
    ||||||    
T  33601495 atttaa 33601500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 47130803 - 47130856
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataa 341  Q
    ||||||||||||||||| ||||||||||| ||  ||||| ||||||||||||||    
T  47130803 ttttcaacttattttcacaagttctccaagatagcttatgaaaacaacttataa 47130856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 18865062 - 18865129
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    ||||| ||||||||||||||||||||||||||||  | || |||||| |||| |||||||| |||||||    
T  18865062 ataagtttttttcaacttattttcataagttctctgaaataacttatgaaaa-aacttatagcatatac 18865129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 27566690 - 27566734
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagtt 310  Q
    |||||||||  |||| |||||||||||||||||||||||||||||    
T  27566690 ttatgacaactttcacaagcttttttcaacttattttcataagtt 27566734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 362
Target Start/End: Complemental strand, 38640072 - 38639993
Alignment:
Q  282 aagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||| | |||||||||||| || ||||||||  |||||||||| ||||||||  |||||  |||||||||||||    
T  38640072 aagcttttttcgatttattttcataacttatccaatatagcttataaaaataacttatagtatata-aaaaaacaatttaa 38639993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 43648303 - 43648227
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    |||||||| | |||||||||||||||||||  |||||||| ||  ||||| |||||| |||||| ||||||| ||||    
T  43648303 ttcataagttcttttcaacttattttcatattttctccaagatagcttatgaaaacagcttatatcatatacgaaaa 43648227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 45004848 - 45004776
Alignment:
Q  262 agctttatgacaatattcataagcttttttcaacttattttcataagttctccaatat-gacttataaaaaca 333  Q
    ||||||| |||||| |||||||||||| | ||||||||| | |||||||||||| ||| | ||||||||||||    
T  45004848 agctttacgacaattttcataagctttatacaacttattcttataagttctccagtatagccttataaaaaca 45004776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 39967983 - 39967920
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||| |||||||||||||||||| |||||||  | ||  ||||| |||||||||||||    
T  39967983 ttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttata 39967920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 395
Target Start/End: Complemental strand, 48507797 - 48507667
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaa-tatgacttataaaaacaacttataacatataccaaaaacaatttaatg 364  Q
    |||||||| | || |||||  ||||||| |||| |||||||||||||| ||  ||| ||||| ||||||  ||||| |||||| ||||||||||||||      
T  48507797 ttatgacattttttataagtatttttcagcttaatttcataagttctctaaggatggcttatgaaaacagtttatagcatata-caaaaacaatttaact 48507699  T
Q  365 ccatt-ttatcttttcctgtagaaacagctta 395  Q
     |||| ||||||||| || |||||||||||||    
T  48507698 tcattcttatcttttgctatagaaacagctta 48507667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 353
Target Start/End: Complemental strand, 28614502 - 28614420
Alignment:
Q  271 acaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    ||||| |||| ||||||||||||  ||| |||||||||||||||||||   ||| |||||||| || ||| ||||||| ||||    
T  28614502 acaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaaacagctaatatcatatacaaaaa 28614420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 30181285 - 30181223
Alignment:
Q  267 tatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaa 329  Q
    ||||||| |||||||||||| || ||| |||||||||| ||||||||||| ||  ||||||||    
T  30181285 tatgacattattcataagctattatcagcttattttcaaaagttctccaagatatcttataaa 30181223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 33602015 - 33602118
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||| | ||||||||| ||||||| ||||  ||||||||||||| || ||  ||||| ||||| ||||||| || ||| ||||||||    
T  33602015 aaaacagctt-atgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaata-caaaaaca 33602111  T
Q  357 atttaat 363  Q
    |||||||    
T  33602112 atttaat 33602118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 3308260 - 3308329
Alignment:
Q  278 tcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||||||||||||| |||||||| |||||||||| || || |||| | |||| | |||||| ||||||    
T  3308260 tcataagcttttttcagcttattttaataagttctcaaacataacttctgaaaatatcttatagcatata 3308329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 529438 - 529382
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaaca 333  Q
    |||||||||| |||||||| |||||||||||| ||||||| ||  ||||| ||||||    
T  529438 ttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaaca 529382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 6536683 - 6536597
Alignment:
Q  272 caatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatt 359  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  ||| ||||||||||||||| |||||| |||||||||||    
T  6536683 caattttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagcatata-caaaaacaatt 6536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 360
Target Start/End: Original strand, 34430449 - 34430550
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaaca 356  Q
    |||||||||| |||||| |  |||||||||||||||| ||||||||||||| |||||||| ||  ||||| |||||| ||||||||||||| ||||||||    
T  34430449 aaaacagctt-atgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatata-caaaaaca 34430546  T
Q  357 attt 360  Q
    ||||    
T  34430547 attt 34430550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 8201311 - 8201197
Alignment:
Q  262 agctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaattta 361  Q
    |||| |||| |||| |||| || |||| || || ||||||||||||||||||||| || ||||||||||||||||||||  ||| | |||||||||||||    
T  8201311 agctatatggcaattttcaaaatctttattaaatttattttcataagttctccaacataacttataaaaacaacttataggataca-caaaaacaattta 8201213  T
Q  362 atgccattttatcttt 377  Q
    |||  | |||||||||    
T  8201212 atgttaatttatcttt 8201197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 6538562 - 6538491
Alignment:
Q  290 ttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||| ||||||||||||||||  | ||||||||||||||||| |||||| || |||||||||||    
T  6538562 ttcaacttattttaataagttctccaatatagcctataaaaacaacttatagcatata-cataaacaatttaa 6538491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 9763642 - 9763563
Alignment:
Q  257 aaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaactt 337  Q
    |||||||||| |||||| | || ||||||||||||||||||| ||||||||||||| ||||||  ||||| ||||||||||    
T  9763642 aaaacagctt-atgacacttttgataagcttttttcaacttaatttcataagttctacaatatagcttatgaaaacaactt 9763563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 359
Target Start/End: Original strand, 20368187 - 20368268
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatt 359  Q
    ||||||||||  |||||||||||||||||||||||||||| |   ||||| |||||||||||||||  ||| |||||||||||    
T  20368187 ttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttataactcata-caaaaacaatt 20368268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 335
Target Start/End: Original strand, 6016382 - 6016440
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaac 335  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||   |||||||||||||    
T  6016382 ttcataagtttttttcaacttatttttatatgttctccaatatagtttataaaaacaac 6016440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 848106 - 848022
Alignment:
Q  222 cataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataa 307  Q
    ||||||||| |||| ||||||||| ||||||   |||||| |||| |||||| | ||| ||||||||||||| |||||||||||||    
T  848106 cataagttttgtgagactgtttggaagaacttataaaaactgctt-atgacatttttcttaagcttttttcagcttattttcataa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 2455106 - 2455004
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||| ||||||||||||||||    |||||    |||||||| | ||||||| || |||||| ||||||||||| |||||||||| ||     
T  2455106 acataagttttgtgagactgtttgggagaacttctgaaaac----ttatgacattgttcataacctgttttcagcttattttcattagttctccaacata 2455011  T
Q  321 acttata 327  Q
    |||||||    
T  2455010 acttata 2455004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 9912187 - 9912240
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaatat 319  Q
    |||||||| | |||||||||| |||| | |||||||||||||||||||||||||    
T  9912187 ttatgacattgttcataagctgttttgagcttattttcataagttctccaatat 9912240  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 30536568 - 30536531
Alignment:
Q  282 aagcttttttcaacttattttcataagttctccaatat 319  Q
    |||||||||||||||||||||||||| |||||||||||    
T  30536568 aagcttttttcaacttattttcataaattctccaatat 30536531  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 359
Target Start/End: Original strand, 35070475 - 35070555
Alignment:
Q  278 tcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatt 359  Q
    ||||||||| ||||||||||||||||||||| |||| || ||  |||| ||||||| |||||||| | || |||||||||||    
T  35070475 tcataagctgttttcaacttattttcataagctctcaaacatagcttacaaaaacagcttataacttgta-caaaaacaatt 35070555  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 35099091 - 35099019
Alignment:
Q  286 ttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatt 359  Q
    ||||||||||||||||||| || | ||| || ||  ||||| |||||||||||||||||||| |||||||||||    
T  35099091 ttttttcaacttattttcaaaaatactctaagatagcttatgaaaacaacttataacatata-caaaaacaatt 35099019  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 14929786 - 14929718
Alignment:
Q  264 ctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaac 332  Q
    |||||||||||| ||||||||||||||| || ||||||||| ||| || ||| |||  |||||||||||    
T  14929786 ctttatgacaattttcataagcttttttaaagttattttcacaagctcgccattatagcttataaaaac 14929718  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Original strand, 8844660 - 8844727
Alignment:
Q  280 ataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||||||||| |||||||||||||||||| |   ||||  ||| ||||||||||||||| ||||||    
T  8844660 ataagcttttttaaacttattttcataagttttaacatatagcttttaaaaacaacttatagcatata 8844727  T

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Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 348
Target Start/End: Complemental strand, 24982823 - 24982697
Alignment:
Q  221 acataagtttcgtgatactgtttgggagaactatcaaaaacagctttatgacaatattcataagcttttttcaacttattttcataagttctccaatatg 320  Q
    |||||||||| |||| ||||||| |||||||  |  | |||||||| |||||| | || || ||||||||| | ||||   ||||||||||||||| ||     
T  24982823 acataagttttgtgagactgttttggagaacatttgagaacagctt-atgacatttttaatgagctttttttagcttaccctcataagttctccaaaata 24982725  T
Q  321 acttataaaaacaacttataacatatac 348  Q
    |||||| |||||| |||||| |||||||    
T  24982724 acttatgaaaacagcttatagcatatac 24982697  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 31624153 - 31624114
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  31624153 ttcataagctgttttcaacttattttcataatttctccaa 31624114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 12836167 - 12836249
Alignment:
Q  266 ttatgacaatattcataagctttttt-caacttattttcataagttctccaatatgacttataaaaacaacttataacatata 347  Q
    |||||||||| |||||||| |||||| |||||||||||| |||||| |  |||||  |||||||| || ||||| ||||||||    
T  12836167 ttatgacaattttcataaggttttttacaacttattttcgtaagttttttaatatagcttataaagaccacttacaacatata 12836249  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 18076277 - 18076231
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttct 312  Q
    |||||||||| ||||| |||| |||||||||||| ||||||||||||    
T  18076277 ttatgacaattttcatgagctgttttcaacttatattcataagttct 18076231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 34430789 - 34430743
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttct 312  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||||    
T  34430789 ttatgacaattttcatatgctttttcaaacttattttcataagttct 34430743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 415367 - 415283
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||| || |||||| |||  || ||||||||||||| |||  ||||||||||||||||||| | |||| | ||||||||||||    
T  415367 ttcataatctgttttcagctttattccataagttctccactatagcttataaaaacaacttatagcttata-cgaaaacaatttaa 415283  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 31624953 - 31624990
Alignment:
Q  282 aagcttttttcaacttattttcataagttctccaatat 319  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  31624953 aagctgttttcagcttattttcataagttctccaatat 31624990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 6200602 - 6200546
Alignment:
Q  297 tattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaa 353  Q
    ||||||||| |||||||||||||   |||||||||||| ||||| ||||||| ||||    
T  6200602 tattttcattagttctccaatatattttataaaaacaagttatagcatatacaaaaa 6200546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 6909892 - 6909963
Alignment:
Q  290 ttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    |||| |||| |||||||| |||||||| ||   |||| ||||||||||||| |||||| ||||||||||||||    
T  6909892 ttcagcttaatttcataaattctccaagatatgttatgaaaacaacttatagcatata-caaaaacaatttaa 6909963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 7148727 - 7148691
Alignment:
Q  279 cataagcttttttcaacttattttcataagttctcca 315  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  7148727 cataagctattttcaacttattttcataagctctcca 7148691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 13907629 - 13907585
Alignment:
Q  296 ttattttcataagttctccaatatgacttataaaaacaacttata 340  Q
    |||||||||||| |||||||| ||| ||||| |||||||||||||    
T  13907629 ttattttcataatttctccaagatggcttatgaaaacaacttata 13907585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 26694930 - 26694870
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaacaacttataacatatac 348  Q
    |||||| |||||||||||||||||| ||| ||   |||| ||||||| |||||||||||||    
T  26694930 ttttcagcttattttcataagttcttcaagatagtttatgaaaacaatttataacatatac 26694870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 32515225 - 32515264
Alignment:
Q  322 cttataaaaacaacttataacatataccaaaaacaatttaa 362  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  32515225 cttataaaaacaacttataacttata-caaaaacaatttaa 32515264  T

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Target: scaffold0050 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 58817 - 58746
Alignment:
Q  265 tttatgacaatattcataagcttttttcaacttattttcataagttctccaatatgacttataaaaacaact 336  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||  ||||| |||||||||    
T  58817 tttatgacaattttcataagcttttttcaacttaatttcataagttcttcaacatagcttatgaaaacaact 58746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 22305 - 22255
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttctccaa 316  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||| |||||    
T  22305 ttatgacaattttcgtaagcttttttcagcttattttcataagttttccaa 22255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 52051 - 52005
Alignment:
Q  266 ttatgacaatattcataagcttttttcaacttattttcataagttct 312  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||||    
T  52051 ttatgataattttcaaaagcttttttcaacttattttcataagttct 52005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 23683 - 23639
Alignment:
Q  288 ttttcaacttattttcataagttctccaatatgacttataaaaac 332  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  23683 ttttcaacttattttcacaagttctccaatatagcttataaaaac 23639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 207584 - 207624
Alignment:
Q  277 ttcataagcttttttcaacttattttcataagttctccaat 317  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  207584 ttcatacgcttttttcaacttatttttataagttctccaat 207624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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