View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12199_high_4 (Length: 352)
Name: NF12199_high_4
Description: NF12199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12199_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 6 - 332
Target Start/End: Original strand, 2775664 - 2775990
Alignment:
| Q |
6 |
agaacctgtgcactttcctctcattttctacagctaaactaactgaaatgtctaggaaatttttgttttcttcaaaccttgcttccaaacccactccatt |
105 |
Q |
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| T |
2775664 |
agaacctgtgcgctttcctctcattttctacagctaaactaactgaaatgtctaggaaatttttgttttcttcaaaccttgcttccaaacccactccatt |
2775763 |
T |
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| Q |
106 |
atcatattcttggtagctcaatgattgtacaacatgacagaaccaaaaaagaaacatcatcctcattgtaaatgttgtgaatgatttggtgcagaaacta |
205 |
Q |
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| T |
2775764 |
atcatattcttggtagctcaatgattgtacaacatgacagaaccaaaaaagaaacatcatcctcattgtaaatgttgtgaatgatttggtgcagaaacta |
2775863 |
T |
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| Q |
206 |
gaaaacaatcattttgtttgctaactattctataattattatgcagacaaaaaactgtaagagaaacgacagacctaatttggtagagtagaggtgtgaa |
305 |
Q |
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| T |
2775864 |
gaaaacaatcattttgtttgctaactattctataattattatgcagacaaaaaactgtaagagaaacgacagacctaatttggtagagtagaggtgtgaa |
2775963 |
T |
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| Q |
306 |
ctcaatcgcatgccataattttgagtg |
332 |
Q |
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| T |
2775964 |
ctcaatcgcatgccataattttgagtg |
2775990 |
T |
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