View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12200_low_4 (Length: 681)
Name: NF12200_low_4
Description: NF12200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12200_low_4 |
 |  |
|
| [»] scaffold0061 (2 HSPs) |
 |  |  |
|
| [»] scaffold0017 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 369; Significance: 0; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 2 - 390
Target Start/End: Original strand, 38187118 - 38187506
Alignment:
| Q |
2 |
aaaccactttcaaatttgtcacatgttctgttaatatttcaaactagtctctatctttgtcaaaggtttctcaattttttctaggcaagacgaggcaccg |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
38187118 |
aaaccactttcaaatttgtcacatgttctgttaatatttcaaactagtctctatctttgtcaaaaatttctcaattttttctagacaagacgaggcaccg |
38187217 |
T |
 |
| Q |
102 |
acactcatgatgttgtaagctatgaaccattgaatgaaataagacaagataatcaagacagcgggacaggggttggtccttccatacctgccttatatgg |
201 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
38187218 |
acactcatgatgttgtaagctatgaacaattgaatgaaataagacaagataatcaagacagcgggacaggggttggtccttccatacctgccttatacgg |
38187317 |
T |
 |
| Q |
202 |
ttattttttaaagttaattaagaacttggaacagggttggtcaatccatccccacctcgtatggtcatttactcattagtgacaattaatctttgtttta |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38187318 |
ttattttttaaagttaattaagaacttggaacagggttggtcaatccatccccacctcgtatggtcatttactcattagtgacaattaatctttgtttta |
38187417 |
T |
 |
| Q |
302 |
aacagtacttcatttcaaatctttgtaagtcaagtaaaaaaccttaacatgaatatacatttaaacttagccccttatttggttatata |
390 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38187418 |
aacagtacttcatttcaaatctttgtaagtcaagtaaaaaaccttaacatgaatatacatttaaacttagccccttatttggttatata |
38187506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 390 - 674
Target Start/End: Original strand, 38190619 - 38190903
Alignment:
| Q |
390 |
atgctatctgctgcaattttaaataacgtctacaacatagtgaaatttgaacaaatcaccattctattcactattcaaccacagttggggtggttgattc |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38190619 |
atgctatctgctgcaattttaaataacgtctacaacatagtgaaatttgaacaaatcaccattctattcactattcaaccacagttggggtggttgattc |
38190718 |
T |
 |
| Q |
490 |
agcgatgccgcgccgctgtttttggtcacgttcgtttttgacagtggcacgctcatgggttgaaggatcggtatcagattctttgaaacccgtgagggtc |
589 |
Q |
| |
|
|||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
38190719 |
agcgatgctgcgctgccgtttttggtcacgttcgtttttgacagtggcacgctcatgggttgatggatcggtatcagattctttgaaacccgtgagggtc |
38190818 |
T |
 |
| Q |
590 |
gttttctcttaacacggtgtggttgatgtgttgttcaccggcgtggttgttcatagtggtactggttcatgaaacacaggttctg |
674 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38190819 |
gttttctcttaacacggtgtggttgatgtgttgttcaccggtgtggttgttcatagaggtactggttcatgaaacacaggttctg |
38190903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 38181889 - 38182032
Alignment:
| Q |
127 |
accattgaatgaaataagacaagataatcaagacagcgggacaggggttggtccttccatacctgccttatatggttattttttaaagttaattaagaac |
226 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |
|
|
| T |
38181889 |
accattgaatgaaatatgacaagctaatcaagacagcgggacaggggttggtccttccatacctgccttatagggttagttattaatgttaattaagaac |
38181988 |
T |
 |
| Q |
227 |
ttggaacagggttggtcaatccatccccacctcgtatggtcatt |
270 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
38181989 |
gtggaacagggttggtcaatccatccccacctcgtaaggtcatt |
38182032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 445
Target Start/End: Complemental strand, 7412435 - 7412313
Alignment:
| Q |
324 |
ttgtaagtcaagtaaaaaaccttaacatgaatatacatttaaacttagccccttatttggttatatatgctatctgctgca-attttaaataacgtctac |
422 |
Q |
| |
|
||||||||||| ||| ||||| ||||| |||| ||||||| ||||||| || |||||| ||||||||| | | | ||||| |||||||| ||| |||| |
|
|
| T |
7412435 |
ttgtaagtcaattaacaaaccctaacaagaatctacatttcaacttagttccatatttgattatatatgttgtatactgcagtttttaaattacggctac |
7412336 |
T |
 |
| Q |
423 |
aacatagtgaaatttgaacaaat |
445 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
7412335 |
aacgtagtgaaatttgaacaaat |
7412313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 38208289 - 38208359
Alignment:
| Q |
322 |
ctttgtaagtcaagtaaaaaaccttaacatgaatatacatttaaacttagccccttatttggttatatatg |
392 |
Q |
| |
|
|||||||||| |||||||||| ||||||| |||||||||| |||| |||| |||| ||||||||||||||| |
|
|
| T |
38208289 |
ctttgtaagttaagtaaaaaatcttaacaagaatatacatataaatttagtccctaatttggttatatatg |
38208359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 38208373 - 38208443
Alignment:
| Q |
381 |
tggttatatatgctatctgctgcaattttaaataacgtctacaacatagtgaaatttgaacaaatcaccattct |
454 |
Q |
| |
|
||||||||||| | ||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||| |
|
|
| T |
38208373 |
tggttatatattttgtctgctgcaattttaaatagcggctacaa---agtgaaatttgaacaaatcactattct |
38208443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 41709199 - 41709242
Alignment:
| Q |
34 |
aatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
41709199 |
aatatttcaaactaatctctatctttgtcaaaagtttctcaatt |
41709242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 38181389 - 38181435
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaattt |
78 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||| |||||||||||| |
|
|
| T |
38181389 |
ttaatatttcaaactagtctccatctttatcaaaagtttctcaattt |
38181435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 16688858 - 16688813
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| | ||||||||| |
|
|
| T |
16688858 |
ttaatatttcaaaataatctctatctttgtcaaatgattctcaatt |
16688813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 28860661 - 28860617
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
28860661 |
ttaatatttcaaactagtctct-tttttgtcaaaagtttctcaatt |
28860617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 122; Significance: 3e-62; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 463 - 671
Target Start/End: Original strand, 11853518 - 11853729
Alignment:
| Q |
463 |
ttcaaccacagttggggtggttgattcagcgatgccgcgccgctgtttttggtcacgttcgttttt---gacagtggcacgctcatgggttgaaggatcg |
559 |
Q |
| |
|
||||||||||||| |||||||||| || |||||| |||||||| |||||| |||| |||| || || ||||||||||||||| ||||||||||||||| |
|
|
| T |
11853518 |
ttcaaccacagtttgggtggttgagtcggcgatgtcgcgccgccgttttttgtcatgttccttgtttccgacagtggcacgctcgtgggttgaaggatcg |
11853617 |
T |
 |
| Q |
560 |
gtatcagattctttgaaacccgtgagggtcgttttctcttaacacggtgtggttgatgtgttgttcaccggcgtggttgttcatagtggtactggttcat |
659 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| || ||||||||||| ||| ||||||||||||| |
|
|
| T |
11853618 |
gtatcagattctttgaaacttgtgagggtcgttttctcttaacacggtgtggctgatggattgttcatcgacgtggttgttcgtagaggtactggttcat |
11853717 |
T |
 |
| Q |
660 |
gaaacacaggtt |
671 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11853718 |
gaaacacaggtt |
11853729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 389
Target Start/End: Complemental strand, 8809681 - 8809616
Alignment:
| Q |
324 |
ttgtaagtcaagtaaaaaaccttaacatgaatatacatttaaacttagccccttatttggttatat |
389 |
Q |
| |
|
||||||||||||| ||||| ||||||| ||||||||||||||| ||||| | |||||||||||||| |
|
|
| T |
8809681 |
ttgtaagtcaagtgaaaaaacttaacaagaatatacatttaaagttagctcgttatttggttatat |
8809616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 8845569 - 8845506
Alignment:
| Q |
324 |
ttgtaagtcaagtaaaaaaccttaacatgaatatacatttaaacttagccccttatttggttat |
387 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||| |||| | |||||||||||| |
|
|
| T |
8845569 |
ttgtaagtcaagtaaaaaaacttaacaagaatatacatttaaatttagttctttatttggttat |
8845506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 324 - 446
Target Start/End: Original strand, 8822303 - 8822425
Alignment:
| Q |
324 |
ttgtaagtcaagtaaaaaaccttaacatgaatatacatttaaacttagccccttatttggttatatatgctatctgctgcaattt-taaataacgtctac |
422 |
Q |
| |
|
|||| |||||||| ||||||||||||| || || ||||| ||| |||| | ||||||||||||||||| | ||| || |||||| ||| ||||| |||| |
|
|
| T |
8822303 |
ttgttagtcaagtgaaaaaccttaacaagactacacattgaaatttagttcattatttggttatatatgttgtctactacaatttgtaattaacggctac |
8822402 |
T |
 |
| Q |
423 |
aacatagtgaaatttgaacaaatc |
446 |
Q |
| |
|
||||| |||| |||| |||||||| |
|
|
| T |
8822403 |
aacatcgtgagattt-aacaaatc |
8822425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 41008962 - 41008917
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
||||||||| ||| |||||||||||||||| ||| ||||||||||| |
|
|
| T |
41008962 |
ttaatattttaaaatagtctctatctttgttaaaagtttctcaatt |
41008917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 396 - 454
Target Start/End: Original strand, 65431 - 65489
Alignment:
| Q |
396 |
tctgctgcaattttaaataacgtctacaacatagtgaaatttgaacaaatcaccattct |
454 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
65431 |
tctgctgcaattttaaatagcggctacaacatagtgaaatttgaacaaatcaccattct |
65489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 65362 - 65402
Alignment:
| Q |
352 |
gaatatacatttaaacttagccccttatttggttatatatg |
392 |
Q |
| |
|
|||||||||| |||| |||| |||||||||||||||||||| |
|
|
| T |
65362 |
gaatatacatataaatttagtcccttatttggttatatatg |
65402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 396 - 454
Target Start/End: Complemental strand, 133201 - 133143
Alignment:
| Q |
396 |
tctgctgcaattttaaataacgtctacaacatagtgaaatttgaacaaatcaccattct |
454 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
133201 |
tctgctgcaattttaaatagcggctacaacatagtgaaatttgaacaaatcaccattct |
133143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 133270 - 133230
Alignment:
| Q |
352 |
gaatatacatttaaacttagccccttatttggttatatatg |
392 |
Q |
| |
|
|||||||||| |||| |||| |||||||||||||||||||| |
|
|
| T |
133270 |
gaatatacatataaatttagtcccttatttggttatatatg |
133230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 34835629 - 34835673
Alignment:
| Q |
34 |
aatatttcaaactagtctctatctttgtcaaaggtttctcaattt |
78 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
34835629 |
aatatttcaaactagtctctgtctttgtcaaaagtttctcaattt |
34835673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 7790451 - 7790406
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
||||||||||||| |||| ||||||||| ||||| ||||||||||| |
|
|
| T |
7790451 |
ttaatatttcaaattagtttctatctttatcaaaagtttctcaatt |
7790406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.0000000003; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 33614424 - 33614378
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaattt |
78 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||||||||| |
|
|
| T |
33614424 |
ttaatatttcaaactagtctctgtctttgacaaaagtttctcaattt |
33614378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 13119230 - 13119275
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||| ||||||||||| |
|
|
| T |
13119230 |
ttaatatttcaaaatagtcgctgtctttgtcaaaagtttctcaatt |
13119275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 49448296 - 49448251
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||| |||| |||||| |
|
|
| T |
49448296 |
ttaatatttcaaactagtctttgtctttgtcaaaagtttatcaatt |
49448251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 54090930 - 54090978
Alignment:
| Q |
28 |
tctgttaatatttcaaactagtctctatctttgtcaaaggtttctcaat |
76 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| || ||||||||| |
|
|
| T |
54090930 |
tctgttaatatttcaaactagtctatgtctttgtcgaaactttctcaat |
54090978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 6511051 - 6511099
Alignment:
| Q |
27 |
ttctgttaatatttcaaactagtctctatctttgtcaaaggtttctcaa |
75 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||| |||||||| |
|
|
| T |
6511051 |
ttctgttaatatttcaaaatagtctccatctttgtcaaaaatttctcaa |
6511099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 10028782 - 10028827
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
||||||||||||| |||||||||||||| |||| ||||||||||| |
|
|
| T |
10028782 |
ttaatatttcaaatcagtctctatctttgccaaaagtttctcaatt |
10028827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 5656618 - 5656573
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
||||||||| |||||||||||| ||||||| ||| ||||||||||| |
|
|
| T |
5656618 |
ttaatattttaaactagtctctgtctttgttaaaagtttctcaatt |
5656573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 8285278 - 8285233
Alignment:
| Q |
32 |
ttaatatttcaaactagtctctatctttgtcaaaggtttctcaatt |
77 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||| ||||||||||| |
|
|
| T |
8285278 |
ttaatattttaaaatagtctatatctttgtcaaaagtttctcaatt |
8285233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University