View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12203_low_20 (Length: 248)
Name: NF12203_low_20
Description: NF12203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12203_low_20 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 10374421 - 10374659
Alignment:
| Q |
1 |
gaaatacttaactcaggatgttaaccttattttatctttattctcctataaactgaattttgagttattattgttcagaccttgatttgttaatttgtgc |
100 |
Q |
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| T |
10374421 |
gaaatacttaactcaggatgttaaccttattttatctttattctcctataaactgaattttgagttattattattcagaccttgatttgttaatttgtgt |
10374520 |
T |
|
| Q |
101 |
ggatcttatgttatatgattatgcagcgtgatgaaaatgacatggttgaacttgtcagaagctgccaaaatgagtttaaggaatactatattcaaatgca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
10374521 |
ggatcttatgttatatgattatgcagcgtgatgaaaatgacatggttgaacttgtcacaagctgccaaaatgagtttaaggaatactatattcaaatgca |
10374620 |
T |
|
| Q |
201 |
agcagctaagagaagtcaagcacctcatccttcacaggt |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
10374621 |
agcagctaagagaagtcaagcacctcatccttcacaggt |
10374659 |
T |
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