View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12205_low_10 (Length: 335)
Name: NF12205_low_10
Description: NF12205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12205_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 11 - 319
Target Start/End: Complemental strand, 36555514 - 36555205
Alignment:
| Q |
11 |
acatcagacaaaacaatggaaaaaagaaaatctacttaattgctatgcatattaaaaacggaaacaaccttaaaccttaggaaaaaagcttgaagacaat |
110 |
Q |
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| T |
36555514 |
acatcagacaaaacaatggaaaaaagaaaatctacttaattgctatgcatattaaaaacggaaacaaccttaaaccttaggaaaaaagcttgaagacaat |
36555415 |
T |
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| Q |
111 |
aaacacaatagtcctacacaagttcatgggaagagagagacgtcattaaagatgaatgcaagcaagctgctccaatcaagcatacccaaacttgtccgta |
210 |
Q |
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|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
36555414 |
aaacacaatagtcccacataagttcatgggaagagagagacgtcattaaagatgaatgcaagcaagctgctccaatcaagtatacccaaacttgtccgta |
36555315 |
T |
|
| Q |
211 |
acctatttctaccaag-ccccttgcaactaaccatctgaaacagctacaaagtagagcactgaaccaattacgatcaattacattattcaggcttactac |
309 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36555314 |
acctatttctaccaagcccccttgcaactaaccatctgaaacagctacaaagtagagcactgaaccaattacgatcaattacattattcaggcttactac |
36555215 |
T |
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| Q |
310 |
atagaccaca |
319 |
Q |
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|||||||||| |
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| T |
36555214 |
atagaccaca |
36555205 |
T |
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