View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12205_low_16 (Length: 245)
Name: NF12205_low_16
Description: NF12205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12205_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 20712356 - 20712545
Alignment:
| Q |
1 |
tcccttcaacatttagaggtaagagaaacttctcaaattatggtatcattatcaaatgtgactcttctctaatttcaacnnnnnnnnnatgccatatttc |
100 |
Q |
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| T |
20712356 |
tcccttcaacatttagaggtaagaaaaacttctcaaattatggtatcattatcaaatgtgactcttctctaatttcaactttttttt-atgccatatttc |
20712454 |
T |
|
| Q |
101 |
aggtgagactagattcaacttaaagttttgtatttgaagcttttgattccaagaaaggtatattatccaaaatccattttcataactttct |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20712455 |
aggtgagactagattcaacttaaagttttgtatttgaagcttttgattccaagaaaggtatattatccaaaatccattttcataactttct |
20712545 |
T |
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