View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12208_high_1 (Length: 884)

Name: NF12208_high_1
Description: NF12208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12208_high_1
NF12208_high_1
[»] chr8 (32 HSPs)
chr8 (1-267)||(25264760-25265025)
chr8 (1-267)||(33294800-33295066)
chr8 (503-674)||(25264338-25264509)
chr8 (508-672)||(25265800-25265964)
chr8 (508-674)||(33295341-33295506)
chr8 (503-673)||(33293938-33294109)
chr8 (320-384)||(25264643-25264707)
chr8 (509-674)||(39885972-39886137)
chr8 (532-674)||(3157956-3158098)
chr8 (320-384)||(33295119-33295183)
chr8 (534-671)||(2552408-2552544)
chr8 (509-673)||(39884615-39884779)
chr8 (617-674)||(17707452-17707509)
chr8 (617-673)||(22714053-22714109)
chr8 (617-673)||(36899897-36899953)
chr8 (523-659)||(27166778-27166914)
chr8 (621-671)||(15279641-15279691)
chr8 (621-671)||(15460010-15460060)
chr8 (620-674)||(17706163-17706217)
chr8 (514-579)||(45447099-45447164)
chr8 (614-674)||(26720249-26720309)
chr8 (472-506)||(25264521-25264555)
chr8 (617-674)||(357975-358032)
chr8 (532-670)||(5461936-5462074)
chr8 (475-512)||(33295275-33295312)
chr8 (625-674)||(36901189-36901238)
chr8 (620-672)||(31916971-31917023)
chr8 (620-672)||(45448499-45448551)
chr8 (622-673)||(1650219-1650270)
chr8 (615-673)||(359316-359374)
chr8 (536-590)||(31917618-31917672)
chr8 (621-670)||(31819051-31819100)
[»] chr4 (62 HSPs)
chr4 (1-267)||(53355519-53355783)
chr4 (1-267)||(19995429-19995696)
chr4 (37-267)||(55948345-55948575)
chr4 (1-267)||(44252028-44252294)
chr4 (38-264)||(39653603-39653829)
chr4 (516-674)||(19994496-19994654)
chr4 (509-673)||(44251604-44251768)
chr4 (503-674)||(19995944-19996115)
chr4 (503-674)||(55948843-55949014)
chr4 (511-674)||(44253090-44253253)
chr4 (508-673)||(18597631-18597796)
chr4 (510-674)||(55947358-55947522)
chr4 (510-670)||(53355100-53355262)
chr4 (532-673)||(42978838-42978979)
chr4 (532-673)||(48713381-48713522)
chr4 (532-673)||(42977197-42977338)
chr4 (532-672)||(32082552-32082692)
chr4 (532-674)||(54123464-54123606)
chr4 (532-670)||(10337106-10337244)
chr4 (532-669)||(10338087-10338226)
chr4 (532-672)||(54121825-54121967)
chr4 (532-670)||(48711860-48711998)
chr4 (617-673)||(18597858-18597914)
chr4 (320-384)||(19995745-19995809)
chr4 (320-384)||(44251908-44251972)
chr4 (320-384)||(53355404-53355468)
chr4 (509-669)||(22309034-22309194)
chr4 (532-673)||(42889730-42889870)
chr4 (476-672)||(39654532-39654731)
chr4 (617-674)||(54534976-54535033)
chr4 (509-674)||(22307669-22307834)
chr4 (617-669)||(38157023-38157075)
chr4 (476-579)||(39637362-39637466)
chr4 (581-672)||(24919052-24919143)
chr4 (532-589)||(16880408-16880465)
chr4 (560-673)||(21354723-21354837)
chr4 (321-384)||(55948631-55948691)
chr4 (532-604)||(16879226-16879298)
chr4 (621-664)||(9561854-9561897)
chr4 (620-671)||(33609351-33609402)
chr4 (533-673)||(39929274-39929414)
chr4 (615-673)||(4933333-4933391)
chr4 (472-506)||(19994679-19994713)
chr4 (472-506)||(19995898-19995932)
chr4 (615-673)||(29756271-29756329)
chr4 (472-506)||(44251786-44251820)
chr4 (472-506)||(53355281-53355315)
chr4 (472-506)||(55948779-55948813)
chr4 (615-672)||(4907463-4907520)
chr4 (620-669)||(54536704-54536753)
chr4 (501-601)||(3068995-3069095)
chr4 (617-673)||(4906128-4906184)
chr4 (472-512)||(44253018-44253058)
chr4 (617-672)||(4931998-4932053)
chr4 (617-668)||(7499360-7499411)
chr4 (631-669)||(55017743-55017781)
chr4 (625-678)||(11148344-11148397)
chr4 (617-674)||(29757612-29757669)
chr4 (620-669)||(33607471-33607520)
chr4 (324-381)||(39653499-39653556)
chr4 (624-669)||(42226731-42226776)
chr4 (617-674)||(55019361-55019418)
[»] chr1 (65 HSPs)
chr1 (1-267)||(33258281-33258546)
chr1 (1-267)||(33278453-33278718)
chr1 (1-267)||(7654634-7654900)
chr1 (1-267)||(19056707-19056973)
chr1 (1-267)||(36146291-36146555)
chr1 (1-267)||(28920021-28920287)
chr1 (472-673)||(33257880-33258080)
chr1 (472-673)||(33278052-33278252)
chr1 (503-674)||(7655154-7655325)
chr1 (508-673)||(16673151-16673316)
chr1 (510-674)||(28920552-28920716)
chr1 (508-672)||(33259267-33259431)
chr1 (508-672)||(33279426-33279590)
chr1 (44-267)||(24088702-24088927)
chr1 (508-674)||(36145342-36145508)
chr1 (503-673)||(28919082-28919252)
chr1 (508-672)||(7653686-7653850)
chr1 (503-664)||(36146802-36146962)
chr1 (508-661)||(19057762-19057915)
chr1 (512-601)||(16672726-16672815)
chr1 (534-672)||(41668273-41668411)
chr1 (518-583)||(1969636-1969701)
chr1 (532-669)||(50316969-50317106)
chr1 (533-672)||(24438867-24439007)
chr1 (532-674)||(22684069-22684211)
chr1 (536-674)||(19249318-19249455)
chr1 (320-384)||(19056589-19056653)
chr1 (533-670)||(19251082-19251219)
chr1 (320-384)||(33258167-33258231)
chr1 (320-384)||(33278339-33278403)
chr1 (617-671)||(16592022-16592076)
chr1 (532-674)||(13211031-13211173)
chr1 (325-384)||(28920348-28920407)
chr1 (531-674)||(50315316-50315459)
chr1 (549-674)||(33981502-33981627)
chr1 (533-674)||(46652701-46652842)
chr1 (558-673)||(24437073-24437188)
chr1 (534-672)||(7185777-7185915)
chr1 (617-674)||(31321007-31321064)
chr1 (510-579)||(33485222-33485291)
chr1 (514-579)||(46605823-46605888)
chr1 (472-512)||(7653879-7653919)
chr1 (472-512)||(7655090-7655130)
chr1 (472-512)||(36145537-36145577)
chr1 (625-669)||(44268891-44268935)
chr1 (620-672)||(46604439-46604491)
chr1 (341-384)||(7654959-7655002)
chr1 (620-670)||(33485329-33485379)
chr1 (320-380)||(36146607-36146664)
chr1 (472-506)||(36146756-36146790)
chr1 (618-672)||(44269079-44269133)
chr1 (621-674)||(7184321-7184374)
chr1 (617-673)||(8323443-8323499)
chr1 (625-673)||(10708029-10708077)
chr1 (617-673)||(28251930-28251986)
chr1 (472-504)||(28919269-28919301)
chr1 (617-673)||(31815774-31815830)
chr1 (617-673)||(32847813-32847869)
chr1 (615-674)||(26734424-26734483)
chr1 (472-503)||(33259216-33259247)
chr1 (472-503)||(33279375-33279406)
chr1 (620-674)||(9419825-9419879)
chr1 (617-671)||(9626469-9626523)
chr1 (519-601)||(24085582-24085664)
chr1 (519-673)||(18309084-18309238)
[»] chr7 (70 HSPs)
chr7 (1-267)||(45276827-45277092)
chr7 (1-267)||(31393003-31393268)
chr7 (1-267)||(8230966-8231232)
chr7 (1-267)||(21716009-21716259)
chr7 (1-267)||(32882064-32882329)
chr7 (37-267)||(40028893-40029104)
chr7 (503-674)||(21716509-21716680)
chr7 (508-674)||(21715070-21715236)
chr7 (508-672)||(45277862-45278026)
chr7 (508-678)||(31392052-31392222)
chr7 (509-673)||(31393555-31393719)
chr7 (508-671)||(8231529-8231692)
chr7 (508-673)||(8230069-8230234)
chr7 (503-669)||(40028460-40028626)
chr7 (503-673)||(45276409-45276578)
chr7 (508-674)||(40029924-40030090)
chr7 (508-657)||(4675692-4675840)
chr7 (532-672)||(46245122-46245262)
chr7 (503-673)||(32882605-32882774)
chr7 (508-669)||(32881119-32881280)
chr7 (535-674)||(46246497-46246636)
chr7 (532-670)||(14774515-14774652)
chr7 (532-670)||(15224968-15225105)
chr7 (533-674)||(12180559-12180700)
chr7 (532-674)||(15136859-15137000)
chr7 (509-674)||(13420182-13420347)
chr7 (320-384)||(21716311-21716375)
chr7 (534-673)||(37133570-37133709)
chr7 (532-601)||(15135449-15135518)
chr7 (320-384)||(8231304-8231368)
chr7 (320-384)||(32882388-32882452)
chr7 (320-384)||(40028779-40028843)
chr7 (320-384)||(45276713-45276777)
chr7 (535-674)||(11671208-11671347)
chr7 (532-673)||(12178482-12178623)
chr7 (320-384)||(31393333-31393397)
chr7 (535-671)||(37131836-37131972)
chr7 (532-673)||(30792749-30792896)
chr7 (532-586)||(11747478-11747532)
chr7 (617-674)||(706741-706798)
chr7 (531-672)||(11669841-11669982)
chr7 (618-674)||(21914643-21914699)
chr7 (534-674)||(43546651-43546791)
chr7 (620-674)||(708159-708213)
chr7 (509-672)||(37348735-37348898)
chr7 (533-601)||(9532534-9532602)
chr7 (630-674)||(28848556-28848600)
chr7 (472-512)||(31393485-31393525)
chr7 (618-673)||(3704397-3704452)
chr7 (630-673)||(25008091-25008134)
chr7 (543-586)||(31734685-31734728)
chr7 (472-506)||(21716463-21716497)
chr7 (473-511)||(40028651-40028689)
chr7 (472-506)||(40029873-40029907)
chr7 (472-506)||(45276590-45276624)
chr7 (625-674)||(31734766-31734815)
chr7 (472-512)||(8231460-8231500)
chr7 (618-674)||(9532625-9532681)
chr7 (472-512)||(21715265-21715305)
chr7 (617-673)||(32429874-32429930)
chr7 (472-504)||(32882541-32882573)
chr7 (617-673)||(41591514-41591570)
chr7 (630-673)||(25009502-25009545)
chr7 (550-588)||(21914413-21914451)
chr7 (620-674)||(27162002-27162056)
chr7 (617-675)||(41385813-41385871)
chr7 (548-601)||(11748887-11748940)
chr7 (618-674)||(21895366-21895423)
chr7 (472-505)||(31392258-31392291)
chr7 (617-674)||(38758321-38758378)
[»] chr3 (28 HSPs)
chr3 (37-267)||(33733928-33734158)
chr3 (1-267)||(53528398-53528665)
chr3 (472-669)||(33734361-33734558)
chr3 (503-673)||(53527969-53528139)
chr3 (508-673)||(33732964-33733129)
chr3 (510-673)||(53529431-53529594)
chr3 (532-672)||(31796753-31796893)
chr3 (532-673)||(40499171-40499312)
chr3 (532-674)||(41083189-41083332)
chr3 (532-672)||(48568449-48568589)
chr3 (532-669)||(31656956-31657094)
chr3 (535-673)||(41081801-41081939)
chr3 (535-673)||(48566995-48567133)
chr3 (535-689)||(31795356-31795510)
chr3 (320-384)||(33734208-33734272)
chr3 (535-669)||(30700299-30700433)
chr3 (320-384)||(53528277-53528338)
chr3 (617-674)||(32558917-32558974)
chr3 (560-674)||(41879922-41880036)
chr3 (617-669)||(22942339-22942391)
chr3 (630-673)||(8391400-8391443)
chr3 (472-506)||(53529378-53529412)
chr3 (472-504)||(33733166-33733198)
chr3 (617-672)||(31199249-31199304)
chr3 (630-673)||(45981406-45981449)
chr3 (472-506)||(53528154-53528188)
chr3 (617-674)||(3150023-3150080)
chr3 (620-673)||(30701847-30701900)
[»] chr5 (36 HSPs)
chr5 (1-267)||(1417833-1418099)
chr5 (1-267)||(30333383-30333646)
chr5 (37-267)||(25915115-25915346)
chr5 (508-672)||(1418831-1418995)
chr5 (503-672)||(30332283-30332452)
chr5 (510-670)||(25916175-25916335)
chr5 (509-673)||(30333904-30334067)
chr5 (503-670)||(25914493-25914659)
chr5 (532-673)||(38624715-38624856)
chr5 (535-672)||(17554925-17555063)
chr5 (508-592)||(1417491-1417575)
chr5 (535-672)||(8874196-8874333)
chr5 (532-671)||(39101716-39101855)
chr5 (532-670)||(8872522-8872659)
chr5 (532-674)||(39103330-39103472)
chr5 (535-670)||(36619546-36619682)
chr5 (535-673)||(38626092-38626230)
chr5 (536-640)||(11772623-11772727)
chr5 (532-674)||(36621145-36621287)
chr5 (320-384)||(1417716-1417780)
chr5 (532-674)||(27756704-27756846)
chr5 (617-673)||(16308564-16308620)
chr5 (320-384)||(25914793-25914857)
chr5 (535-669)||(11771201-11771335)
chr5 (535-601)||(17552041-17552108)
chr5 (325-384)||(30333704-30333763)
chr5 (472-512)||(25916104-25916144)
chr5 (631-674)||(16182608-16182651)
chr5 (472-506)||(1417592-1417626)
chr5 (472-506)||(1418780-1418814)
chr5 (472-506)||(25914671-25914705)
chr5 (622-671)||(18201354-18201403)
chr5 (532-671)||(16310018-16310157)
chr5 (472-506)||(30333852-30333886)
chr5 (630-672)||(42775420-42775462)
chr5 (640-673)||(4285758-4285791)
[»] chr2 (52 HSPs)
chr2 (1-267)||(1841121-1841386)
chr2 (500-672)||(1841642-1841814)
chr2 (508-669)||(13947751-13947911)
chr2 (508-669)||(14088940-14089100)
chr2 (508-673)||(1840156-1840321)
chr2 (532-673)||(45499304-45499445)
chr2 (532-674)||(40303291-40303433)
chr2 (535-673)||(28563375-28563513)
chr2 (535-674)||(45492954-45493093)
chr2 (535-674)||(45500696-45500835)
chr2 (535-672)||(40304684-40304821)
chr2 (503-592)||(13948485-13948578)
chr2 (503-592)||(14089692-14089785)
chr2 (532-672)||(16142226-16142366)
chr2 (320-380)||(1841442-1841502)
chr2 (320-384)||(13948268-13948332)
chr2 (320-384)||(14089475-14089539)
chr2 (534-673)||(38729983-38730123)
chr2 (503-674)||(16143486-16143657)
chr2 (222-267)||(13948172-13948217)
chr2 (222-267)||(14089379-14089424)
chr2 (551-673)||(38728184-38728305)
chr2 (620-673)||(44421349-44421402)
chr2 (620-670)||(44465097-44465147)
chr2 (532-670)||(7317392-7317530)
chr2 (617-674)||(18161047-18161104)
chr2 (618-671)||(22060485-22060538)
chr2 (472-512)||(13948421-13948461)
chr2 (472-512)||(14089129-14089169)
chr2 (472-512)||(14089628-14089668)
chr2 (617-673)||(18224849-18224905)
chr2 (532-604)||(44095423-44095495)
chr2 (472-506)||(1840356-1840390)
chr2 (472-506)||(13947928-13947962)
chr2 (630-672)||(20587039-20587081)
chr2 (630-672)||(20588476-20588518)
chr2 (515-674)||(22053123-22053281)
chr2 (620-673)||(35588126-35588179)
chr2 (630-674)||(13948615-13948659)
chr2 (630-674)||(14089822-14089866)
chr2 (630-674)||(18159885-18159929)
chr2 (622-674)||(18308190-18308242)
chr2 (617-673)||(22054333-22054389)
chr2 (617-673)||(43516397-43516453)
chr2 (617-673)||(44097357-44097413)
chr2 (618-674)||(44492316-44492372)
chr2 (558-674)||(6844042-6844158)
chr2 (139-174)||(13948138-13948173)
chr2 (139-174)||(14089345-14089380)
chr2 (620-674)||(34591723-34591777)
chr2 (617-674)||(28165656-28165713)
chr2 (532-601)||(44097270-44097339)
[»] chr6 (20 HSPs)
chr6 (673-866)||(33704934-33705127)
chr6 (1-198)||(19083527-19083725)
chr6 (508-671)||(19084015-19084178)
chr6 (532-672)||(8745432-8745572)
chr6 (508-601)||(19082737-19082830)
chr6 (532-673)||(1258358-1258500)
chr6 (535-673)||(1256713-1256851)
chr6 (533-670)||(8752720-8752857)
chr6 (532-671)||(2956154-2956293)
chr6 (510-673)||(7678540-7678707)
chr6 (220-267)||(19083725-19083772)
chr6 (340-384)||(19083831-19083875)
chr6 (533-672)||(1443417-1443556)
chr6 (472-506)||(19082847-19082881)
chr6 (617-674)||(10707674-10707731)
chr6 (729-782)||(21188596-21188649)
chr6 (472-504)||(19083964-19083996)
chr6 (645-674)||(19082695-19082724)
chr6 (620-673)||(28302171-28302224)
chr6 (620-673)||(28509849-28509902)
[»] scaffold0489 (5 HSPs)
scaffold0489 (37-198)||(6305-6468)
scaffold0489 (472-678)||(5369-5581)
scaffold0489 (508-674)||(6710-6876)
scaffold0489 (321-384)||(6569-6632)
scaffold0489 (220-267)||(6468-6515)
[»] scaffold0633 (1 HSPs)
scaffold0633 (550-672)||(6831-6953)
[»] scaffold1176 (1 HSPs)
scaffold1176 (533-673)||(2050-2190)
[»] scaffold0280 (1 HSPs)
scaffold0280 (532-674)||(12129-12272)
[»] scaffold0018 (1 HSPs)
scaffold0018 (533-672)||(193591-193730)
[»] scaffold0129 (1 HSPs)
scaffold0129 (617-674)||(4261-4318)
[»] scaffold1118 (1 HSPs)
scaffold1118 (535-664)||(2420-2549)
[»] scaffold0524 (1 HSPs)
scaffold0524 (630-669)||(7701-7740)


Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-129; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 25265025 - 25264760
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25265025 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 25264927  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25264926 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 25264827  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25264826 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 25264760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 33294800 - 33295066
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33294800 tcaatgatgagacgagagttggtaatgaaaaaaaaatcattctttaggtttttcaatttgagaattttgtgaatttttttaatattgggaattcgagcat 33294899  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33294900 tcacaatgaggattttgttgttataatttgattttgatattattaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgttaat 33294999  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33295000 ctgaccattatcaatggggattttgtttgggtttatgagaagttgtctattgagagtgagatgatga 33295066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 503 - 674
Target Start/End: Complemental strand, 25264509 - 25264338
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25264509 tgccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaatttacagggattgttttaa 25264410  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||       ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25264409 aacaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 25264338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 508 - 672
Target Start/End: Original strand, 25265800 - 25265964
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  25265800 cgtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatagggattgttttaaaacaa 25265899  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
         ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  25265900 aaaaagatacagggacgaaaacaaaaaacacgccaaattacagagacgatttacatatttaagcc 25265964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 508 - 674
Target Start/End: Original strand, 33295341 - 33295506
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |||      
T  33295341 cgtcatcctttgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacggaaatcaaaaagttattaacttacaagggttgttttagaac-a 33295439  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
         ||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  33295440 aaaaagatacagggacaaaaacaaaaaacacgccaaattacagagacgatttacatatttaagccta 33295506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 503 - 673
Target Start/End: Complemental strand, 33294109 - 33293938
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||     
T  33294109 tgccacgtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaatttataggggttgttttag 33294010  T
Q  603 aac-nnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||        ||| || ||||||||||||||||| || ||||||||| |||||||||| ||||||||||||    
T  33294009 aacaaaaaaaagatacaaggacgaaaaccaaaaacgcgtcaaattacaaggacgatttatatatttaagcct 33293938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 25264707 - 25264643
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25264707 gatgaatttatgaagacaatgatgaagatgttaaagaggtggaaggaagaagatgaagaaagcta 25264643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 509 - 674
Target Start/End: Original strand, 39885972 - 39886137
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    |||||||||||||||||||||   |||||||||||| ||   |||||| |||||| |||| ||||| | |  |||||||||||| |||||||| ||        
T  39885972 gtcatcctccgtttgccacatagacgtttttgtaacagattatgacggcagggactaaaaccaaaatgcttataacttacaggggttgttttagaataaa 39886071  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
        ||| ||||||| |||||||||||||||| || |||||||||| |||||||||||||||||||    
T  39886072 aaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaagccta 39886137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 3157956 - 3158098
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||| |||||| || | |||||| ||||||  ||| ||||| |||  ||||||||||||  ||||||| |||       ||| |||||||||||||||    
T  3157956 gcgtttgtgtaacagatgctgacggcagggaccgaaagcaaaatgtttataacttacagggtctgttttagaacaaaaaaagatacagggacgaaaacca 3158055  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  3158056 aaaacacgcgaacttacagggacgatttacatatttaagccta 3158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 33295119 - 33295183
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33295119 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 33295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 534 - 671
Target Start/End: Complemental strand, 2552544 - 2552408
Alignment:
Q  534 gtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaa 633  Q
    |||||||||||  | |||||||||| |||||||||||||||  ||  |||||||| ||| |||||||| |||       ||||||||||||| || ||||    
T  2552544 gtttttgtaacaaatgttgacgggaaggacgaaaatcaaaacatttgtaacttacggggtttgttttagaacaaaaaa-gatgcagggacgataatcaaa 2552446  T
Q  634 aacacgccaaattacagggacgatttacatatttaagc 671  Q
    ||||||| || |||||| ||||||||||||||||||||    
T  2552445 aacacgcaaacttacagagacgatttacatatttaagc 2552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 509 - 673
Target Start/End: Complemental strand, 39884779 - 39884615
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    |||||||||||||||||||||   |||||||||||| ||   ||| || |||||| |||| ||||| | |  ||||||||| || || ||||| |||       
T  39884779 gtcatcctccgtttgccacatagacgtttttgtaacagattatgaaggcagggactaaaaccaaaatgcttataacttacaagggttattttagaacaaa 39884680  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
        ||| ||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||    
T  39884679 aaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaagcct 39884615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 617 - 674
Target Start/End: Original strand, 17707452 - 17707509
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  17707452 cagggactaaaaccaaaaacacgctaaattacatggaccatttacatatttaagccta 17707509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 22714053 - 22714109
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||||| | || |||||||| ||||||||||||||||||||    
T  22714053 cagggacgaaaaccaaaaacacacgaacttacaggggcgatttacatatttaagcct 22714109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 617 - 673
Target Start/End: Complemental strand, 36899953 - 36899897
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||| |||||||||||||||| |||||||||||||  |||||||||||||||||    
T  36899953 cagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagcct 36899897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 523 - 659
Target Start/End: Complemental strand, 27166914 - 27166778
Alignment:
Q  523 gccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcaggga 622  Q
    ||||||||  |||||||||||| |||| | |||||||| ||||||||||||| | ||  ||||||||||||| ||||| |||        ||| ||| |     
T  27166914 gccacatgcacgtttttgtaacagaagctaacgggaggaacgaaaatcaaaacgatagcaacttacagggatggttttgaaagaaaaaaagatacagtgg 27166815  T
Q  623 cgaaaaccaaaaacacgccaaattacagggacgattt 659  Q
    |||||| ||||||||| |||||||||| |||||||||    
T  27166814 cgaaaagcaaaaacacaccaaattacaaggacgattt 27166778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 621 - 671
Target Start/End: Original strand, 15279641 - 15279691
Alignment:
Q  621 gacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  15279641 gacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaagc 15279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 621 - 671
Target Start/End: Original strand, 15460010 - 15460060
Alignment:
Q  621 gacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  15460010 gacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaagc 15460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 620 - 674
Target Start/End: Complemental strand, 17706217 - 17706163
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||| |||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  17706217 ggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagccta 17706163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 579
Target Start/End: Complemental strand, 45447164 - 45447099
Alignment:
Q  514 cctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 579  Q
    |||||||| ||||||||||||||||| ||||||| | |||||| |||||||||  |||||||||||    
T  45447164 cctccgttagccacatgtgcgtttttttaacggatggtgacggcagggacgaatttcaaaaagtta 45447099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 614 - 674
Target Start/End: Original strand, 26720249 - 26720309
Alignment:
Q  614 atgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||||||||||||||||||||| || |||  ||||  |||||||||||||||||||    
T  26720249 atgcagggacgaaaaccaaaaacacgcgaacttatggggattatttacatatttaagccta 26720309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 25264555 - 25264521
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  25264555 tccctctcactgtgtgactcatcaataagtttgcc 25264521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 358032 - 357975
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||||  ||| || ||||||||||  ||||||||||||||||||    
T  358032 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagccta 357975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 670
Target Start/End: Complemental strand, 5462074 - 5461936
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| || | |||||| |||||| |||| ||||| |||  ||| ||||||||  ||||||| |||       ||| ||  ||||||||| |    
T  5462074 gcgtttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataaattacagggtctgttttagaacaaaaaaagatacaaagacgaaaacaa 5461975  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaag 670  Q
    ||||||||| || |||| | |||||||||||||||||||    
T  5461974 aaaacacgcgaacttacggtgacgatttacatatttaag 5461936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 512
Target Start/End: Original strand, 33295275 - 33295312
Alignment:
Q  475 ctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    |||||||||||||||||||||||||||||||| |||||    
T  33295275 ctctcactgtgtgactcatcaataagtttgccacgtca 33295312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 674
Target Start/End: Original strand, 36901189 - 36901238
Alignment:
Q  625 aaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||| ||||||||||| |||||||||||||  ||||||||||||||||||    
T  36901189 aaaaacaaaaacacgctaaattacagggaccttttacatatttaagccta 36901238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 620 - 672
Target Start/End: Complemental strand, 31917023 - 31916971
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||||  |||||||| |||||||||| ||||||| ||||||||||||||    
T  31917023 ggacgaaaataaaaaacacaccaaattacatggacgatatacatatttaagcc 31916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 620 - 672
Target Start/End: Original strand, 45448499 - 45448551
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||||||||||||||| || ||| ||||||  ||||||||||||||||    
T  45448499 ggacgaaaaccaaaaacacgcgaacttagagggaccttttacatatttaagcc 45448551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 673
Target Start/End: Original strand, 1650219 - 1650270
Alignment:
Q  622 acgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||| |||||||||| || ||||| ||||| |||||||||||||||||    
T  1650219 acgaaaactaaaaacacgcgaacttacaaggacggtttacatatttaagcct 1650270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 615 - 673
Target Start/End: Original strand, 359316 - 359374
Alignment:
Q  615 tgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||||||| |||||  ||| || ||||||||||  |||||||||||||||||    
T  359316 tgcagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagcct 359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 536 - 590
Target Start/End: Original strand, 31917618 - 31917672
Alignment:
Q  536 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacag 590  Q
    |||||||||| || || |||||||||||||||||  |||| ||||||||||||||    
T  31917618 ttttgtaacgaaaattaacgggagggacgaaaatagaaaatttattaacttacag 31917672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 670
Target Start/End: Complemental strand, 31819100 - 31819051
Alignment:
Q  621 gacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||||||||||||||||| | |||||| ||||||||||||  ||||||||    
T  31819100 gacgaaaaccaaaaacacacaaaattatagggacgatttatttatttaag 31819051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 53355783 - 53355519
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53355783 tcaatgatgagacgagagttggtaatgaaaaaaa--tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 53355686  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53355685 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 53355586  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53355585 ctgaccattgtcaatggggattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 53355519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 19995429 - 19995696
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnn-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagca 99  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19995429 tcaatgatgagacgagagttggtaatgaaaaaaaaaatcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaatttgagca 19995528  T
Q  100 ttcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaa 199  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19995529 ttcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaa 19995628  T
Q  200 tctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19995629 tctgaccattgtcaatggggattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 19995696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 37 - 267
Target Start/End: Original strand, 55948345 - 55948575
Alignment:
Q  37 tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgatttcg 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  55948345 tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagtattcacaatgaggattttgttgttataatttgattttg 55948444  T
Q  137 atattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatgggaattttgtttgggtttgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  55948445 atattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatggagattttgtttgggtttgt 55948544  T
Q  237 gagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||||||||||||||||    
T  55948545 gagaagttgtctattgagagtgagatgatga 55948575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 44252294 - 44252028
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    ||||||||||||| |||||||||||||         ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  44252294 tcaatgatgagacaagagttggtaatgaaaaaaaaatcattctttaggttttttaatttgagaattttgtgaattttttcaatattgggaattcgatcat 44252195  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  44252194 tcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttagctgagactatgaacattgtggattttagtgttgagatgtcaat 44252095  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44252094 ctgaccattgtcaatggggattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 44252028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 38 - 264
Target Start/End: Complemental strand, 39653829 - 39653603
Alignment:
Q  38 cattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgatttcga 137  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||  ||    
T  39653829 cattctttaggtttttcaatttggaagttttgtgaattttttcaatattgagaatttgagcattctcaatgaggactttgttgttataatttgattatga 39653730  T
Q  138 tattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatgggaattttgtttgggtttgtg 237  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||    
T  39653729 tattatcaataagaattttgttgggactatgaacattgtggattttagtgttgaggcgtcaatctgaccattatcaatggggattttgtttgggtttgtg 39653630  T
Q  238 agaagttgtctattgagagtgagatga 264  Q
    ||| ||||||||||||| | |||||||    
T  39653629 agatgttgtctattgagggcgagatga 39653603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 516 - 674
Target Start/End: Complemental strand, 19994654 - 19994496
Alignment:
Q  516 tccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngat 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||       |||    
T  19994654 tccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagat 19994555  T
Q  616 gcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19994554 acagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 19994496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 509 - 673
Target Start/End: Complemental strand, 44251768 - 44251604
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||       
T  44251768 gtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaagggttgttttagaacaaa 44251669  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
        ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44251668 aaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 44251604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 503 - 674
Target Start/End: Original strand, 19995944 - 19996115
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||     
T  19995944 tgccacgtcatcatccatttgccacatgtgcgtttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttacaggggttgttttag 19996043  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||       ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19996044 aacaaaaaaagatacagggaccaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 19996115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 503 - 674
Target Start/End: Original strand, 55948843 - 55949014
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||     
T  55948843 tgccacgtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggaagaaaatccaaaagttattaacttacaggggttgttttag 55948942  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||       ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55948943 aacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagccta 55949014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 511 - 674
Target Start/End: Original strand, 44253090 - 44253253
Alignment:
Q  511 catcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnn 610  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||| |||         
T  44253090 catcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagagacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaa 44253189  T
Q  611 nngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
      |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44253190 aagatatagggacgaaaaccaaaaacacgccaaattaaagggacgatttacatatttaagccta 44253253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 508 - 673
Target Start/End: Complemental strand, 18597796 - 18597631
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| ||       
T  18597796 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacggaggttgttttagaataa 18597697  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
         ||| ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  18597696 aaaaagatacagggacgaaaaccaaaaacacggcaaattacatggacgatttaaatatttaagcct 18597631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 510 - 674
Target Start/End: Complemental strand, 55947522 - 55947358
Alignment:
Q  510 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnn 609  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| |||        
T  55947522 tcatcctccatttgccacatgtgcatttttataacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggctgttttataacaaaa 55947423  T
Q  610 nnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
       ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  55947422 aaagatacagggacgaaaaccaaaaatacgtcaaattacagggacgatttacatatttaagccta 55947358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 510 - 670
Target Start/End: Complemental strand, 53355262 - 53355100
Alignment:
Q  510 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttt--aaaacnn 607  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||  || ||      
T  53355262 tcatcctccgtttgccacatgtgcgtttttgtaacggcagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacacaa 53355163  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaag 670  Q
          || ||| ||| ||||| |||||||| ||||||||||||||| |||||||||||||||    
T  53355162 aaaaaaatacagagacaaaaacaaaaaacacaccaaattacagggacaatttacatatttaag 53355100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 532 - 673
Target Start/End: Original strand, 42978838 - 42978979
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||       ||| |||||||||||||||    
T  42978838 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaaattattaacttacaaggattgttttagaacaaaaaaagatacagggacgaaaacca 42978937  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  42978938 aaaacacgccaaattacaaggacgatttacatatttaagcct 42978979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 532 - 673
Target Start/End: Original strand, 48713381 - 48713522
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||| ||||||||||||| ||||| ||||||||||||||||| |||||||| |||       ||| |||||||||||||||    
T  48713381 gcgtttttgtaacagagtttgactggagggacgaaaagcaaaaggttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaacca 48713480  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  48713481 aaaacacgccaaattacagggacgatttacatatttaagcct 48713522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 532 - 673
Target Start/End: Complemental strand, 42977338 - 42977197
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||| | || |||||||| |||       ||| |||||||||||||||    
T  42977338 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttaaatgggttgttttagaacaaaaaaagatacagggacgaaaacca 42977239  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  42977238 aaaacacgccaaattacaaggacgatttacatatttaagcct 42977197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 532 - 672
Target Start/End: Original strand, 32082552 - 32082692
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||| ||||||||||||| ||||||||||||||||||||||| || ||||| |||       ||| |||||||||||||||    
T  32082552 gcgtttttgtaacagagtttgacaggagggacgaaaagcaaaaagttattaacttacaggggttattttagaacaaaaaaagatacagggacgaaaacca 32082651  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  32082652 aaaacacgccaaattacacggacgatttacatatttaagcc 32082692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 54123464 - 54123606
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||||||| || ||  ||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||        || |||||||||||||||    
T  54123464 gcgtttttgttacagagtttgacgggagggacgaaaagcaaaaagttattaacttacaggagttgttttagaacaaaaaaatatacagggacgaaaacca 54123563  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  54123564 aaaacatgccaaattacagggacgatttacatatttaagccta 54123606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 532 - 670
Target Start/End: Complemental strand, 10337244 - 10337106
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||| |||||||| ||  ||||||||||||| ||||| ||||| ||||||||||||||||| |||||||| |||       ||| || ||||||||||||    
T  10337244 gcgtctttgtaacagagtttgacgggagggatgaaaagcaaaaggttattaacttacaggggttgttttagaacaaaaaaagatacaaggacgaaaacca 10337145  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10337144 aaaacacgccaaattacagggacgatttacatatttaag 10337106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 532 - 669
Target Start/End: Original strand, 10338087 - 10338226
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaac--nnnnnnngatgcagggacgaaaac 629  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||         ||| ||| ||| |||||    
T  10338087 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttacaggggttgttttaaaacaaaaaaaaagatacagagacaaaaac 10338186  T
Q  630 caaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  10338187 caaaaacacgcaaaattacatggacgatttacatatttaa 10338226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 532 - 672
Target Start/End: Complemental strand, 54121967 - 54121825
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  || |||||||||||||||| ||||||||||||||||||||||| |||||||| |||       ||| ||||||||||||| |    
T  54121967 gcgtttttgtaacagagtttaacgggagggacgaaaagcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacgaaaacaa 54121868  T
Q  632 aaaacac--gccaaattacagggacgatttacatatttaagcc 672  Q
    |||| |   | ||||||||||||||||||||||||||||||||    
T  54121867 aaaaaaaatgtcaaattacagggacgatttacatatttaagcc 54121825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 532 - 670
Target Start/End: Complemental strand, 48711998 - 48711860
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||| ||||| ||||| ||||| || ||||| |||       ||| || |||||||||| |    
T  48711998 gcgtttttgtaaccgagtttgacgggaaggacgaaaatcaaaatgttatcaacttgcaggggttattttagaacaaaaaaagatacaaggacgaaaacaa 48711899  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaag 670  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  48711898 aaaacacgcaaaattacaaggacgatttacatatttaag 48711860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 18597858 - 18597914
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18597858 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 18597914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 19995745 - 19995809
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19995745 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 19995809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 44251972 - 44251908
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  44251972 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 44251908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 53355468 - 53355404
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  53355468 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 53355404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 509 - 669
Target Start/End: Original strand, 22309034 - 22309194
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    |||||||||||||||||||||   |||||||||||| ||   |||||| | |||| |||| ||||| | |  |||||||||||| |||||||| ||        
T  22309034 gtcatcctccgtttgccacatagacgtttttgtaactgattatgacggcacggactaaaaccaaaatgcttataacttacaggggttgttttagaataaa 22309133  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
        ||| ||||||| |||||||||||||||| || |||||||||| ||||||||||||||    
T  22309134 aaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 22309194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 532 - 673
Target Start/End: Original strand, 42889730 - 42889870
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| || |||||||| |||||| |||| ||||| |||  ||||||||| ||  ||||||| |||       ||| || |||||||||| |    
T  42889730 gcgtttttgtaacaga-gttgacggcagggaccaaaagcaaaatgtttataacttacatggtctgttttagaacaaaaaaagatacaaggacgaaaacaa 42889828  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||  || |||||||||||||||||||||||||||||    
T  42889829 aaaacacgtgaacttacagggacgatttacatatttaagcct 42889870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 476 - 672
Target Start/End: Original strand, 39654532 - 39654731
Alignment:
Q  476 tctcactgtgtgactcatcaataagtttgcctcgtcatcctccg-tttgccacatgtgcgtttttgtaac----ggaagttgacgggagggacgaaaatc 570  Q
    ||||| ||||||||||||||  ||||||||| |||||||||| | |||||||||||||||||||||| ||    |  | || |||||||||||||||| |    
T  39654532 tctcagtgtgtgactcatcatcaagtttgccacgtcatcctctgttttgccacatgtgcgtttttgttacatatgctaattaacgggagggacgaaaacc 39654631  T
Q  571 aaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||| ||||  |||||||| || |||||||| ||         || ||| |||||||||||||| |||||||| |||||||||   |||| |||||||||    
T  39654632 aaaaggttaacaacttacatggtttgttttagaa--aaaaaaaatacagtgacgaaaaccaaaatcacgccaacttacagggatcttttaaatatttaag 39654729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 54535033 - 54534976
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||    
T  54535033 cagggacgaaaaccaaaaacacgcgaacttacatggacgatttacatatttaaaccta 54534976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 509 - 674
Target Start/End: Complemental strand, 22307834 - 22307669
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    ||||||||| |||||||||||   |||||||||||| ||   |||||| |||||| |||| ||||| | |  ||||||||| || |||||||| |||       
T  22307834 gtcatcctctgtttgccacatagacgtttttgtaacagattatgacggcagggactaaaaccaaaatgcttataacttacaagggttgttttagaacaaa 22307735  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
        ||| ||||||| ||||||||||||| || || ||||||||||  ||| ||||||||||||||    
T  22307734 aaacgatacagggactaaaaccaaaaacatgcgaacttacagggaccttttgcatatttaagccta 22307669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 617 - 669
Target Start/End: Complemental strand, 38157075 - 38157023
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  38157075 cagggacgaaaaccaaaaacacgcgaacttacagggatgatttacatatttaa 38157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 476 - 579
Target Start/End: Complemental strand, 39637466 - 39637362
Alignment:
Q  476 tctcactgtgtgactcatcaa-taagtttgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaa 574  Q
    |||||| |||||||||||||  |  ||||| | |||||||||| |||| |||||||||||||||| |||| |||| | || |||||||||||||||||||    
T  39637466 tctcacagtgtgactcatcagcttcgtttgtcacgtcatcctcagtttaccacatgtgcgtttttataacagaagctaacaggagggacgaaaatcaaaa 39637367  T
Q  575 agtta 579  Q
     ||||    
T  39637366 ggtta 39637362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 672
Target Start/End: Complemental strand, 24919143 - 24919052
Alignment:
Q  581 taacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||||||| |||||||| |||       ||| |||| ||||| ||||||||||||| || ||||||| ||||||||||||||||||||    
T  24919143 taacttacaggggttgttttagaacaaaaaaagatacaggaacgaagaccaaaaacacgcaaacttacaggtacgatttacatatttaagcc 24919052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 532 - 589
Target Start/End: Original strand, 16880408 - 16880465
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttaca 589  Q
    ||||||||||||| ||  |||||||||||||||| || ||||||||||||||||||||    
T  16880408 gcgtttttgtaacagagtttgacgggagggacgataagcaaaaagttattaacttaca 16880465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 560 - 673
Target Start/End: Original strand, 21354723 - 21354837
Alignment:
Q  560 ggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaa-ttacagggacgatt 658  Q
    |||| |||| ||||||||||  ||||||||||| |||||||| |||       ||| |||||||||||| ||||||||||| ||| |||||||||   ||    
T  21354723 ggactaaaaccaaaaagttaacaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaacacgcgaaacttacagggatcttt 21354822  T
Q  659 tacatatttaagcct 673  Q
    |||||||||||||||    
T  21354823 tacatatttaagcct 21354837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 55948631 - 55948691
Alignment:
Q  321 atgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    |||||||||||||| |   ||||||||||| ||||||| |||||||||||||||||||||||||    
T  55948631 atgaatttatgaagac---gatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 55948691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 604
Target Start/End: Complemental strand, 16879298 - 16879226
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaa 604  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||| ||||||| |||||| || | |||||||||    
T  16879298 gcgtttttgtaacagattttgacgggagggacgaaaagcaaaaggttattaccttacaagggtggttttaaaa 16879226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 621 - 664
Target Start/End: Complemental strand, 9561897 - 9561854
Alignment:
Q  621 gacgaaaaccaaaaacacgccaaattacagggacgatttacata 664  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  9561897 gacgaaaaccaaaaacacgcgaacttacagggacgatttacata 9561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 620 - 671
Target Start/End: Original strand, 33609351 - 33609402
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    ||||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  33609351 ggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagc 33609402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 533 - 673
Target Start/End: Original strand, 39929274 - 39929414
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaa 632  Q
    |||||||||||||| |||| ||||||||||||||   ||||  | || ||||||||| ||||  |||| ||||       ||| |||||||||    |||    
T  39929274 cgtttttgtaacgggagttaacgggagggacgaattgcaaacggctagtaacttacaaggatgattttgaaacaaaaaaagatacagggacgatttgcaa 39929373  T
Q  633 aaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||| |||||||| ||||| |||||||||||||||||    
T  39929374 aaacacgcgaaattacatggacgttttacatatttaagcct 39929414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 615 - 673
Target Start/End: Original strand, 4933333 - 4933391
Alignment:
Q  615 tgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||||  ||| || ||||||||||  |||||||||||||||||    
T  4933333 tgcagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 4933391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 19994713 - 19994679
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  19994713 tccctctcactgtgtgactcatcaataagtttgcc 19994679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 19995898 - 19995932
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  19995898 tccctctcactgtgtgactcatcaataagtttgcc 19995932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 615 - 673
Target Start/End: Complemental strand, 29756329 - 29756271
Alignment:
Q  615 tgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||||  ||| || ||||||||||  |||||||||||||||||    
T  29756329 tgcagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 29756271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 44251820 - 44251786
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  44251820 tccctctcactgtgtgactcatcaataagtttgcc 44251786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 53355315 - 53355281
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  53355315 tccctctcactgtgtgactcatcaataagtttgcc 53355281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 55948779 - 55948813
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  55948779 tccctctcactgtgtgactcatcaataagtttgcc 55948813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 672
Target Start/End: Original strand, 4907463 - 4907520
Alignment:
Q  615 tgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||||||||||||||||  ||| || ||||||||||  ||||||||||||||||    
T  4907463 tgcagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcc 4907520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 669
Target Start/End: Original strand, 54536704 - 54536753
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    |||| |||||||| ||||||| || |||||||||||||||||||||||||    
T  54536704 ggacaaaaaccaagaacacgcgaatttacagggacgatttacatatttaa 54536753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 501 - 601
Target Start/End: Complemental strand, 3069095 - 3068995
Alignment:
Q  501 tttgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttt 600  Q
    |||||| ||||| || ||||| ||| |||  || |||||||||| || | | ||||||||||||||||||||||  ||  ||| ||||||||||||||||    
T  3069095 tttgccacgtcagccgccgttagccgcatcagcatttttgtaacagatgctaacgggagggacgaaaatcaaaacatttgtaatttacagggattgtttt 3068996  T
Q  601 a 601  Q
    |    
T  3068995 a 3068995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Complemental strand, 4906184 - 4906128
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||  ||| || ||||||||||  |||||||||||||||||    
T  4906184 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 4906128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 44253018 - 44253058
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  44253018 tccctctcactgtgtgcctcatcaataagtttgccacgtca 44253058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 672
Target Start/End: Complemental strand, 4932053 - 4931998
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||||||||||||||  ||| || ||||||||||  ||||||||||||||||    
T  4932053 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcc 4931998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 668
Target Start/End: Complemental strand, 7499411 - 7499360
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatattta 668  Q
    |||||||||||| |||||||||| |||| |||| ||||| ||||||||||||    
T  7499411 cagggacgaaaagcaaaaacacgtcaaactacaaggacgctttacatattta 7499360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 631 - 669
Target Start/End: Complemental strand, 55017781 - 55017743
Alignment:
Q  631 aaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    |||||||||| || |||||||||||||||||||||||||    
T  55017781 aaaaacacgcgaacttacagggacgatttacatatttaa 55017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 678
Target Start/End: Complemental strand, 11148397 - 11148344
Alignment:
Q  625 aaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctacttt 678  Q
    |||||||||||| ||| || ||||||||||  ||||| ||||||||||||||||    
T  11148397 aaaaccaaaaacgcgctaacttacagggaccttttacttatttaagcctacttt 11148344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 674
Target Start/End: Original strand, 29757612 - 29757669
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||||  ||  || ||||||||||  ||||||||||||||||||    
T  29757612 cagggacgaaaaccaaaaatgcgtgaacttacagggaccttttacatatttaagccta 29757669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 669
Target Start/End: Complemental strand, 33607520 - 33607471
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    ||||||||||||||||||||| || |||||| |||  |||||||||||||    
T  33607520 ggacgaaaaccaaaaacacgcgaacttacagagaccttttacatatttaa 33607471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 381
Target Start/End: Complemental strand, 39653556 - 39653499
Alignment:
Q  324 aatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaag 381  Q
    |||||||||||  |||||||||||||  ||| ||| |||| |||||||||||||||||    
T  39653556 aatttatgaagataatgatgaagatgaaaaaaaggtggaatgaagaagatgaagaaag 39653499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 669
Target Start/End: Original strand, 42226731 - 42226776
Alignment:
Q  624 gaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    |||||| ||||||| |||||| ||||||||| ||||||||||||||    
T  42226731 gaaaacaaaaaacaggccaaactacagggacaatttacatatttaa 42226776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 674
Target Start/End: Original strand, 55019361 - 55019418
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||| |||||| |||||  ||| |||||||| |||| |||||||||||||||||||    
T  55019361 cagggaagaaaacaaaaaatgcgcgaaattacaaggaccatttacatatttaagccta 55019418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 33258546 - 33258281
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33258546 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagagttttgtgaattttttcaatattgggaattcgagcat 33258448  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33258447 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 33258348  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33258347 ctgaccattgtcaatggggattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 33258281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 33278718 - 33278453
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33278718 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagagttttgtgaattttttcaatattgggaattcgagcat 33278620  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33278619 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 33278520  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33278519 ctgaccattgtcaatggggattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 33278453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 7654634 - 7654900
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnn-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagca 99  Q
    |||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |    
T  7654634 tcaatgatgagacgagagttggtaatgaaaaaaaaaatcattctttaggtttttcaatttaagaattttgtgaatttt-tcaatattgggaattcgagta 7654732  T
Q  100 ttcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaa 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7654733 ttcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttagctgggactatgaacattgtggattttagtgttgagatgtcaa 7654832  T
Q  200 tctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7654833 tctgaccattgtcaatggggattttgtttgggtttgtgaaaagttgtctattgagagtgagatgatga 7654900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 19056973 - 19056707
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  19056973 tcaatgatgagacgagagttggtaatgaaaaaaaaatcattctttaggtttttcaatttgagaattttttgaattttttcaatattggaaatttgagcat 19056874  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  19056873 tcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttagctgggactgtgaacattgtagattttagtgttgagatgtcaat 19056774  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  19056773 ctgaccattatcaatgggaattttgtttaggtttgtcagaagttgtctattgagagtgagatgatga 19056707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 36146291 - 36146555
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  36146291 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagaattttgtgaatttt-tcaatattgggaattcgagtat 36146388  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  36146389 tcacaatgaggattttgttattataatttgattttgatattatcaataaaagtttagctgagactatgaacattgtggattttagtgttgagatgtcaat 36146488  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36146489 ctgaccattgtcaatggggattttgtttgggtttgtgaaaagttgtctattgagagtgagatgatga 36146555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 28920021 - 28920287
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnn-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagca 99  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28920021 tcaatgatgagacgagagttggtaatgaaaaaaaacatcattctttaggtttttcaatttgagaattttgtgaattttttcaatattggaaattcgagca 28920120  T
Q  100 ttcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaa 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  28920121 ttcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttag-tgggactatgaacattgtggattttagtgttgagatttcaa 28920219  T
Q  200 tctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  28920220 tctgatcattgtcaatgggggttttgtttgggtttgtgagaagttgtctattgagagtgatatgatga 28920287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 472 - 673
Target Start/End: Complemental strand, 33258080 - 33257880
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatca 571  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33258080 tccctctcactgtgtgactcatcaataagtttgccacgtcatcctccgtttgccacatttgcgtttttgtaacggaagttgacgggagggacgaaaatca 33257981  T
Q  572 aaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    ||||||||||||||||||||| |||||||| |||       ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33257980 aaaagttattaacttacaggg-ttgttttagaacaaaaaaagatacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 33257882  T
Q  672 ct 673  Q
    ||    
T  33257881 ct 33257880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 472 - 673
Target Start/End: Complemental strand, 33278252 - 33278052
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatca 571  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33278252 tccctctcactgtgtgactcatcaataagtttgccacgtcatcctccgtttgccacatttgcgtttttgtaacggaagttgacgggagggacgaaaatca 33278153  T
Q  572 aaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    ||||||||||||||||||||| |||||||| |||       ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33278152 aaaagttattaacttacaggg-ttgttttagaacaaaaaaagatacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 33278054  T
Q  672 ct 673  Q
    ||    
T  33278053 ct 33278052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 503 - 674
Target Start/End: Original strand, 7655154 - 7655325
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  7655154 tgccacgtcatcctctgtttgccacatgtgcgtttttgtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttag 7655253  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||       ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7655254 aacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaagccta 7655325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 508 - 673
Target Start/End: Original strand, 16673151 - 16673316
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||      
T  16673151 cgtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 16673250  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
         ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16673251 aaaaagatacagggacgaaaaccaaaaacacgcaaaattacagggacgatttacatatttaagcct 16673316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 510 - 674
Target Start/End: Original strand, 28920552 - 28920716
Alignment:
Q  510 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnn 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||        
T  28920552 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaggttattaacttacaggggttgttttagaacaaaa 28920651  T
Q  610 nnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
       ||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  28920652 aaagatacagggacaaaaacaaaaaacacgccaaattacagggacgacttacatatttaagccta 28920716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 508 - 672
Target Start/End: Original strand, 33259267 - 33259431
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||      
T  33259267 cgtcatcgtccgtttgccacatgtgcatttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttaaaacaa 33259366  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
         ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33259367 aaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagcc 33259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 508 - 672
Target Start/End: Original strand, 33279426 - 33279590
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||      
T  33279426 cgtcatcgtccgtttgccacatgtgcatttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttaaaacaa 33279525  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
         ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33279526 aaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagcc 33279590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 44 - 267
Target Start/End: Original strand, 24088702 - 24088927
Alignment:
Q  44 ttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgatttcgatattat 143  Q
    ||||||||||||||||  |||||||   ||||||||||| ||||||||||| |||||||  |||||||||||| ||||||||||||||||  ||||||||    
T  24088702 ttaggtttttcaattttggaattttcgtaattttttcaaaattgggaattcaagcattcttaatgaggatttttttgttataatttgattatgatattat 24088801  T
Q  144 caataaaagtttagttgggac--tatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatgggaattttgtttgggtttgtgagaa 241  Q
    |||||| ||||| ||| ||||  |||| |||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||    
T  24088802 caataagagttttgttaggactatatggacattgtggattttggtgttgagatgtcaatctgtccactgtcaatgagaattttgtttaggtttgtgagaa 24088901  T
Q  242 gttgtctattgagagtgagatgatga 267  Q
    ||||| |||||||  ||| |||||||    
T  24088902 gttgtgtattgaggatgatatgatga 24088927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 508 - 674
Target Start/End: Complemental strand, 36145508 - 36145342
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||      
T  36145508 cgtcatcctccgtttgccacatgtgcatttttgtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 36145409  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
         ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  36145408 aaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagccta 36145342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 503 - 673
Target Start/End: Complemental strand, 28919252 - 28919082
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||     
T  28919252 tgccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacggaagggacgaaaatcaaaaagttattaacttataggggttgttttag 28919153  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||       ||| |||||| ||||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  28919152 aacaaaaaaagatacagggatgaaaatcaaaaacacgccaaattacagggacaatttatatatttaagcct 28919082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 508 - 672
Target Start/End: Complemental strand, 7653850 - 7653686
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||| |||      
T  7653850 cgtcatcctccgtttgccacatgtgcatttttgtaatggaagttgacgggagggacaaaaatcaaaaagttattaacttataggggctgttttagaacaa 7653751  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
         ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  7653750 aaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagcc 7653686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 503 - 664
Target Start/End: Original strand, 36146802 - 36146962
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  36146802 tgccacgtcatcctttctttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacatggattgttttag 36146901  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacata 664  Q
    |||       ||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  36146902 aacaaaaaaagataca-ggacgaaaaccaaaaacacgtcaaattacagggacgatttacata 36146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 508 - 661
Target Start/End: Original strand, 19057762 - 19057915
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||| |||||||| |||      
T  19057762 cgtcatcctccgtttgccacatgtgcgtttttgtaacagaagttgacggaagggacgaaaataaaaaagttattaacttataggggttgttttagaacaa 19057861  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttac 661  Q
         ||| || | |||||||| |||||||||||||||||||| ||||||||||    
T  19057862 aaaaagatacatgaacgaaaactaaaaacacgccaaattacagagacgatttac 19057915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 512 - 601
Target Start/End: Complemental strand, 16672815 - 16672726
Alignment:
Q  512 atcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta 601  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  16672815 atcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacggaaatcaaaaagttattaacttataggggttgtttta 16672726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 534 - 672
Target Start/End: Complemental strand, 41668411 - 41668273
Alignment:
Q  534 gtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaa 633  Q
    ||||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| | |||||||| |||        || ||| |||||||||||||    
T  41668411 gtttttgtaacagagtttgacgggagagacgaaaagcaaaaagttattaacttacagaggttgttttagaacaaaaaaatatacagagacgaaaaccaaa 41668312  T
Q  634 aacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  41668311 aacacgccaaattacagagacgatttacatatttaagcc 41668273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 1969701 - 1969636
Alignment:
Q  518 cgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaa 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1969701 cgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaa 1969636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 532 - 669
Target Start/End: Original strand, 50316969 - 50317106
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| || | |||||||||||||||||||||||| |||  |||||||||||| |||||||| |||       ||| |||||||||||| ||    
T  50316969 gcgtttttgtaacagatgctgacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatca 50317068  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaa 669  Q
    ||||||||| || ||||| |||||||||||||||||||    
T  50317069 aaaacacgcgaacttacatggacgatttacatatttaa 50317106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 533 - 672
Target Start/End: Original strand, 24438867 - 24439007
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnn-gatgcagggacgaaaacca 631  Q
    |||||||||||| || | ||||||| |||||||||||||||| |||  |||||||||||| |||||||| |||        ||| |||||||||||||||    
T  24438867 cgtttttgtaacagatgctgacgggtgggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaaagatacagggacgaaaacca 24438966  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||| || ||||||||||||||||||||||| ||||    
T  24438967 aaaacacgcgaatttacagggacgatttacatattttagcc 24439007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 22684069 - 22684211
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||||| |||| ||||||||||| |||||||||| |||||||||||| || |||||||| |||||||| |||       ||| || ||||||||||||    
T  22684069 gcgtttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaatttacagggtttgttttagaacaaaaaaagatacatggacgaaaacca 22684168  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||| || ||||| ||||  |||||||||| |||||||    
T  22684169 aaaacacgcgaacttacaaggaccttttacatattaaagccta 22684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 536 - 674
Target Start/End: Complemental strand, 19249455 - 19249318
Alignment:
Q  536 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaa 635  Q
    ||||||||| ||  || |||| ||||||||||| ||||| ||||||||||||| ||| |||||||| |||       ||| ||  |||||||||||||||    
T  19249455 ttttgtaacagagttttacggaagggacgaaaagcaaaa-gttattaacttaccggggttgttttagaacaaaaaaagatacaaagacgaaaaccaaaaa 19249357  T
Q  636 cacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  19249356 caatccaaattacagggacgatttacatatttaagccta 19249318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 19056653 - 19056589
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19056653 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 19056589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 533 - 670
Target Start/End: Original strand, 19251082 - 19251219
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaa 632  Q
    |||||||||||| ||  ||||| ||||||||||||| |||||| ||||||| |||||||| |||||||| |||       |||  |||||| || || ||    
T  19251082 cgtttttgtaacagagtttgactggagggacgaaaagcaaaaaattattaatttacaggggttgttttagaacaaaaaaagatatagggacaaacacaaa 19251181  T
Q  633 aaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  19251182 aaacacgcaaaaatacagggacgatttacatatttaag 19251219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 33258231 - 33258167
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33258231 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 33258167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 33278403 - 33278339
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33278403 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 33278339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 617 - 671
Target Start/End: Complemental strand, 16592076 - 16592022
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16592076 cagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagc 16592022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 13211031 - 13211173
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||||||||||||| | |||||| |||||  |||| |||||  ||  ||||||||||||  ||||||| |||       ||| |||||||||||||||    
T  13211031 gcgtttttgtaacggatgatgacggcagggaataaaagcaaaacatttataacttacagggtctgttttagaacaaaaagagatacagggacgaaaacca 13211130  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||| | || ||||||||| ||||||||||||||| ||||    
T  13211131 aaaacacacaaacttacagggaagatttacatatttaaaccta 13211173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 384
Target Start/End: Original strand, 28920348 - 28920407
Alignment:
Q  325 atttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    |||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  28920348 atttatgaagacaatgatgaagatgtaaaagaggtgaaaggaagaagatgaagaaagcta 28920407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 674
Target Start/End: Complemental strand, 50315459 - 50315316
Alignment:
Q  531 tgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacc 630  Q
    ||||||||||||||||||||| |||  |||||| |||| ||||| ||||  |||||||||||   |||||| |||         | ||| ||||||||||    
T  50315459 tgcgtttttgtaacggaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacagagacgaaaacc 50315360  T
Q  631 aaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||| || ||||||||||  ||||||||||||||||||    
T  50315359 aaaaacacgcgaacttacagggaccttttacatatttaagccta 50315316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 674
Target Start/End: Complemental strand, 33981627 - 33981502
Alignment:
Q  549 gttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattac 648  Q
    |||||||||| ||||||||||||||| |||  ||||||||| |  |||||||| |||       ||| ||| ||  |||||||||||||| | || |||     
T  33981627 gttgacgggatggacgaaaatcaaaacgtttgtaacttacatgatttgttttagaacaaaaaaagatacagagaataaaaccaaaaacacacgaacttat 33981528  T
Q  649 agggacgatttacatatttaagccta 674  Q
    ||||||||||||||||||||||||||    
T  33981527 agggacgatttacatatttaagccta 33981502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 533 - 674
Target Start/End: Original strand, 46652701 - 46652842
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaa 632  Q
    |||||||||||||| |||| ||||||||||||||   ||||  | || ||||||||| ||||  |||| ||||       ||| |||||||||    |||    
T  46652701 cgtttttgtaacgggagttaacgggagggacgaattgcaaacggctagtaacttacaaggatgattttgaaacaaaaaaagatacagggacgatttgcaa 46652800  T
Q  633 aaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  46652801 aaacacgcgaaattacagggacgttttacatatttaagccta 46652842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 24437188 - 24437073
Alignment:
Q  558 agggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgat 657  Q
    |||||| |||| ||||||||||  || |||||||| |||||||| |||       ||| ||| ||||||||| |||||||||| || ||||||||||  |    
T  24437188 agggactaaaaccaaaaagttaacaatttacagggtttgttttagaacaaaaaaagatacagtgacgaaaacaaaaaacacgcgaacttacagggacctt 24437089  T
Q  658 ttacatatttaagcct 673  Q
    ||||||||||||||||    
T  24437088 ttacatatttaagcct 24437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 534 - 672
Target Start/End: Original strand, 7185777 - 7185915
Alignment:
Q  534 gtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaa 633  Q
    ||||||||||| || | |||||| |||||| |||| ||||| |||  ||||||||||||  ||||||| ||        ||| ||||||||||||| |||    
T  7185777 gtttttgtaacagatgctgacggaagggaccaaaagcaaaatgtttataacttacagggtctgttttagaataaaaaaagatacagggacgaaaacaaaa 7185876  T
Q  634 aacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||| || || ||||| ||||||||| ||||||||||||    
T  7185877 aacatgcaaacttacaaggacgatttgcatatttaagcc 7185915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 31321064 - 31321007
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||||||||| || ||||||||| ||||||  ||||||||||||    
T  31321064 cagggacgaaaaccaaaaacacgcgaacttacagggatgatttaactatttaagccta 31321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 510 - 579
Target Start/End: Original strand, 33485222 - 33485291
Alignment:
Q  510 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 579  Q
    |||||||||||| ||||||||| ||||||||||||  ||| | |||||||||||||||| ||||| ||||    
T  33485222 tcatcctccgttagccacatgtacgtttttgtaacacaagctaacgggagggacgaaaagcaaaacgtta 33485291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 579
Target Start/End: Original strand, 46605823 - 46605888
Alignment:
Q  514 cctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtta 579  Q
    |||||||| ||||||||||||||||| ||||||| | |||||| |||||||||  |||||||||||    
T  46605823 cctccgttagccacatgtgcgtttttttaacggatggtgacggcagggacgaatttcaaaaagtta 46605888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 7653919 - 7653879
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  7653919 tccctctcactgtgtgactcatcaataagtttgccacgtca 7653879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 7655090 - 7655130
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  7655090 tccctctcactgtgtgactcatcaataagtttgccacgtca 7655130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 36145577 - 36145537
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  36145577 tccctctcactgtgtgactcatcaataagtttgccacgtca 36145537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 669
Target Start/End: Complemental strand, 44268935 - 44268891
Alignment:
Q  625 aaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  44268935 aaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 44268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 620 - 672
Target Start/End: Complemental strand, 46604491 - 46604439
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  46604491 ggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagcc 46604439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 7654959 - 7655002
Alignment:
Q  341 atgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  7654959 atgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 7655002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 670
Target Start/End: Original strand, 33485329 - 33485379
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaag 670  Q
    ||||||||| ||||||||| | |||||||||| ||||||||||||||||||    
T  33485329 ggacgaaaaacaaaaacacactaaattacaggaacgatttacatatttaag 33485379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 36146607 - 36146664
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaa 380  Q
    ||||||||||||||| |   ||||||||||| ||||||| |||||||||||||||||||||    
T  36146607 gatgaatttatgaagac---gatgaagatgtaaaagaggtggaaggaagaagatgaagaaa 36146664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 36146756 - 36146790
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  36146756 tccctctcactgtgtgactcatcaataagtttgcc 36146790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 618 - 672
Target Start/End: Original strand, 44269079 - 44269133
Alignment:
Q  618 agggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||| ||||| ||||||||||| || |||||| |||||||||||||||||||||    
T  44269079 agggatgaaaatcaaaaacacgcgaatttacagagacgatttacatatttaagcc 44269133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 674
Target Start/End: Complemental strand, 7184374 - 7184321
Alignment:
Q  621 gacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||||| || ||||| | || |||||||||||||||||||    
T  7184374 gacgaaaaccaaaaacacgcgaacttacaagaacaatttacatatttaagccta 7184321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 8323443 - 8323499
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||  ||| || ||||||||||  |||||||||||||||||    
T  8323443 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 8323499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 625 - 673
Target Start/End: Complemental strand, 10708077 - 10708029
Alignment:
Q  625 aaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||| || ||||||||||  |||||||||||||||||    
T  10708077 aaaaccaaaaacacgcgaacttacagggactttttacatatttaagcct 10708029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Complemental strand, 28251986 - 28251930
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||  ||| |||||||||||||  ||| |||||||||||||    
T  28251986 cagggacgaaaaccaaaaatgcgctaaattacagggaccttttgcatatttaagcct 28251930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 28919301 - 28919269
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttg 504  Q
    |||||||||||||||||||||||||||||||||    
T  28919301 tccctctcactgtgtgactcatcaataagtttg 28919269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 31815774 - 31815830
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||  ||| || ||||||||||  |||||||||||||||||    
T  31815774 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 31815830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Complemental strand, 32847869 - 32847813
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||| |||||||||||| |||||| ||||||||||  ||||| |||||||||||    
T  32847869 cagggactaaaaccaaaaacgcgccaacttacagggaccttttacttatttaagcct 32847813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 674
Target Start/End: Complemental strand, 26734483 - 26734424
Alignment:
Q  615 tgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||||||  ||| || ||||| ||||  ||||||||||||||||||    
T  26734483 tgcagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaagccta 26734424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 503
Target Start/End: Original strand, 33259216 - 33259247
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagttt 503  Q
    ||||||||||||||||||||||||||||||||    
T  33259216 tccctctcactgtgtgactcatcaataagttt 33259247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 503
Target Start/End: Original strand, 33279375 - 33279406
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagttt 503  Q
    ||||||||||||||||||||||||||||||||    
T  33279375 tccctctcactgtgtgactcatcaataagttt 33279406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 620 - 674
Target Start/End: Original strand, 9419825 - 9419879
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||| |||| |||||||||||||| ||||| ||||  ||||||||||||||||||    
T  9419825 ggactaaaagcaaaaacacgccaacttacaaggaccttttacatatttaagccta 9419879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 617 - 671
Target Start/End: Complemental strand, 9626523 - 9626469
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    ||||||||||||| ||||| |||| || ||||||||||  |||||||||||||||    
T  9626523 cagggacgaaaacaaaaaatacgcgaacttacagggaccttttacatatttaagc 9626469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 519 - 601
Target Start/End: Complemental strand, 24085664 - 24085582
Alignment:
Q  519 gtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta 601  Q
    |||||||||||||| ||||||||||| |||| | ||  |||||| ||||||||||| ||||  || |||||||| ||| ||||    
T  24085664 gtttgccacatgtgtgtttttgtaacagaagctaacaagagggatgaaaatcaaaaggttaacaatttacagggtttgcttta 24085582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 673
Target Start/End: Complemental strand, 18309238 - 18309084
Alignment:
Q  519 gtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgca 618  Q
    ||||| ||||| | |||||||||||  || | |||||  ||| || |||| ||||| |||  ||||||||| ||||||||||| |||       ||| ||    
T  18309238 gtttgtcacatatacgtttttgtaatagacgatgacgacaggaaccaaaaccaaaacgtttataacttacaaggattgttttagaacaaaaaaagataca 18309139  T
Q  619 gggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||| ||||| |||   || ||| |||||||||||||| ||||||||||    
T  18309138 gggacgaaaatcaaaatcacaagaatttagagggacgatttacaaatttaagcct 18309084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 223; Significance: 1e-122; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 45277092 - 45276827
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45277092 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 45276994  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45276993 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaattttagttgggactatgaacattgtggattttagtgttaagatgtcaat 45276894  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45276893 ctgaccattgtcaatggggattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 45276827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 31393003 - 31393268
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31393003 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattggaaattcgagcat 31393101  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31393102 tcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttagttgagactatgaacattgtggattttagtgttgagatgtcaat 31393201  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31393202 ctgaccattgtcaatggggattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 31393268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 8230966 - 8231232
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8230966 tcaatgatgagacgagagttggtaatgaaaaaaaaatcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 8231065  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  8231066 tcacaatgaggattttgttgttataatttgattttgatattaacaataaaagtttatttgagactatgaacattgtgaattttagtgttgagatgtcaat 8231165  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  8231166 ctgaccattgtcaatggagattttgtttgggtttgtgagaagttgtctattgagaatgagatgatga 8231232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 21716009 - 21716259
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21716009 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 21716107  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||    
T  21716108 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttag---------------ttgtggattttagtgttgagatgtcaat 21716192  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21716193 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 21716259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 32882064 - 32882329
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||| ||||||         ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  32882064 tcaatgatgagacgagagtttgtaatgaaaaaaaaatcattctttaggtttttcaattttagaattttgtgaattttttcaatattgggagttcgagcat 32882163  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  32882164 tcacaatgaggattttgttgttataatttgattttgatattatcaataaaaaattagttcggactatgaacattgtggattttagtgttgagatgtcaat 32882263  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
     ||||||| |||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  32882264 ttgaccatagtcaatggg-gttttgtttgagtttgtgagaagttgtccattgagagtgagatgatga 32882329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 37 - 267
Target Start/End: Complemental strand, 40029104 - 40028893
Alignment:
Q  37 tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgatttcg 136  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |    
T  40029104 tcattctttaggtttttcaatttgagaattttgtgaattttt-caatattggaaattcgagcattcataatgaggattttgttgttataatttgattttg 40029006  T
Q  137 atattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatgggaattttgtttgggtttgt 236  Q
    ||||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  40029005 atattatcaa------------------tatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatgaggattttgtttggttttgt 40028924  T
Q  237 gagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||||||||||||||||    
T  40028923 gagaagttgtctattgagagtgagatgatga 40028893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 503 - 674
Target Start/End: Original strand, 21716509 - 21716680
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21716509 tgccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 21716608  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||       ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21716609 aacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaagccta 21716680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 508 - 674
Target Start/End: Complemental strand, 21715236 - 21715070
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  21715236 cgtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatagggattgttttaaaacaa 21715137  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
         ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21715136 aaaaagatacagggacgaaaatcaaaaacacgccaaattacagggacgatttacatatttaagccta 21715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 508 - 672
Target Start/End: Original strand, 45277862 - 45278026
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||      
T  45277862 cgtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttaaaacaa 45277961  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
         ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45277962 aaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 45278026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 508 - 678
Target Start/End: Complemental strand, 31392222 - 31392052
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| |||      
T  31392222 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttggcgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 31392123  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctacttt 678  Q
         ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  31392122 aaaaagatacagggacgaaaaccaaaaacacgtcaaattacagggacgatttacatatttaagccttcttt 31392052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 509 - 673
Target Start/End: Original strand, 31393555 - 31393719
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||       
T  31393555 gtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttacaggggttgttttataacaaa 31393654  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
        ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31393655 aaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 31393719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 508 - 671
Target Start/End: Original strand, 8231529 - 8231692
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||      
T  8231529 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagtgacgaaaatcaaaaagttattaacttacaggggttgttttagaacaa 8231628  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
         ||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  8231629 aaaaagatacagggacaaaaaccaaaaacaagccaaattacagggacgatttacatatttaagc 8231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 508 - 673
Target Start/End: Complemental strand, 8230234 - 8230069
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||| |||      
T  8230234 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgagagggacgaaaataaaaaagttattaacttataggggttgttttagaacaa 8230135  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
         ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8230134 aaaaagatacagggacgaaaaccaaaaacacaccaaattacagggacgatttacatatttaagcct 8230069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 40028626 - 40028460
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||     
T  40028626 tgccacgtcatcttctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaacttataggggttgttttag 40028527  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    |||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40028526 aacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 40028460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 503 - 673
Target Start/End: Complemental strand, 45276578 - 45276409
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  45276578 tgccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttag 45276479  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||       ||| ||||||| |||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  45276478 aacaaaaaaagatacagggacaaaaaccaaaaactcgccaaattaca-ggacgatctacatatttaagcct 45276409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 508 - 674
Target Start/End: Original strand, 40029924 - 40030090
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | |||||||| |||      
T  40029924 cgtcatccttcgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttactaacttatagaggttgttttagaacaa 40030023  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
          || |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40030024 aaaaatatacagggatgaaaacaaaaaacacgccaaattacagggacgatttacatatttaagccta 40030090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 508 - 657
Target Start/End: Original strand, 4675692 - 4675840
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||| |||      
T  4675692 cgtcatcctctgtttgccgcatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatagtggttgttttagaac-a 4675790  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgat 657  Q
         ||| || ||||||||| ||||||||||||||||||||||||||||    
T  4675791 aaaaagatacatggacgaaaatcaaaaacacgccaaattacagggacgat 4675840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 532 - 672
Target Start/End: Complemental strand, 46245262 - 46245122
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||       ||| | |||||||||||||    
T  46245262 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaacca 46245163  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||| || ||||||||||  ||||||||||||||||    
T  46245162 aaaacacgcgaacttacagggaccttttacatatttaagcc 46245122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 503 - 673
Target Start/End: Original strand, 32882605 - 32882774
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| | || ||||||||     
T  32882605 tgccacgtcatcctatgtttgccacatgtgcgtttttgtaacggaagttgacggaagggacgaaaatcaaaaagtcattaacttataagggttgttttag 32882704  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||        || || |||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  32882705 aacaaaagaatatacatggacaaaaaccaaaaacatg-caaattacagggacgatttacatatttaagcct 32882774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 508 - 669
Target Start/End: Complemental strand, 32881280 - 32881119
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |||      
T  32881280 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 32881181  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
         ||| || | || ||||| ||||| | ||||||||||| | || ||||||||||||||    
T  32881180 aaaaagatacatgaactaaaacaaaaaatatgccaaattacaagaacaatttacatatttaa 32881119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 535 - 674
Target Start/End: Original strand, 46246497 - 46246636
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||| |||       ||| ||||||||||||||||||    
T  46246497 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 46246596  T
Q  635 acacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||| || ||||||||||  ||||||||||||||||||    
T  46246597 acacgcgaacttacagggaccttttacatatttaagccta 46246636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 532 - 670
Target Start/End: Complemental strand, 14774652 - 14774515
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||       ||| || |||||||||| |    
T  14774652 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaac-aaaaatgatacacggacgaaaacaa 14774554  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||||| || || |||| ||||| |||||||||||||||    
T  14774553 aaaacatgcgaacttacggggacaatttacatatttaag 14774515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 532 - 670
Target Start/End: Complemental strand, 15225105 - 15224968
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||       ||| || |||||||||| |    
T  15225105 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaac-aaaaatgatacacggacgaaaacaa 15225007  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||||| || || |||| ||||| |||||||||||||||    
T  15225006 aaaacatgcgaacttacggggacaatttacatatttaag 15224968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 533 - 674
Target Start/End: Original strand, 12180559 - 12180700
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaa 632  Q
    |||||||||||| || | |||||||||||||||||||||||| |||  |||||||||||| |||||||| |||       ||| ||||||||||||||||    
T  12180559 cgtttttgtaacagatgctgacgggagggacgaaaatcaaaacgtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaa 12180658  T
Q  633 aaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||| || |||||||||| ||| |||||||| ||||||    
T  12180659 aaacacgcgaacttacagggacaattaacatattttagccta 12180700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 15136859 - 15137000
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||||| |||| |||||||||||| |||| ||||||||||||||||||||||| || || |||||||| |||       ||| || ||||||||| ||    
T  15136859 gcgtttttttaacagaagttgacggg-gggatgaaaatcaaaaagttattaacttgcaagggttgttttagaacaaaaaaagattcaaggacgaaaatca 15136957  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||| || |||||||||||||||| |||||||||||||    
T  15136958 aaaacacgcgaatttacagggacgatttatatatttaagccta 15137000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 509 - 674
Target Start/End: Original strand, 13420182 - 13420347
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    |||||| ||||||||||||||   |||||||||||||||   |||||| |||||| |||| ||||| | |  |||||||||||| |||||||| |||       
T  13420182 gtcatcatccgtttgccacatagacgtttttgtaacggattatgacggcagggactaaaaccaaaatgcttataacttacaggggttgttttagaacaaa 13420281  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
        ||| ||||||| |||||||||||||||| || |||||||| | |||||||||||||||||||    
T  13420282 aaaagatacagggactaaaaccaaaaacacgcaaacttacaggggccatttacatatttaagccta 13420347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 21716311 - 21716375
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21716311 gatgaatttatgaagacaatgatgaagatgttaaagaggtggaaggaagaagatgaagaaagcta 21716375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 534 - 673
Target Start/End: Original strand, 37133570 - 37133709
Alignment:
Q  534 gtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaa 633  Q
    ||||||||||||||| |||| |||||| ||||||| ||||| |||  |||||| | ||| |||||||| |||       ||| ||| |||||||||||||    
T  37133570 gtttttgtaacggaaattgaagggaggaacgaaaaccaaaacgtttataacttccgggggttgttttagaacaaaaaaagatacagtgacgaaaaccaaa 37133669  T
Q  634 aacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||| || |||| ||||||||||||||||||||||||    
T  37133670 aacacgcgaacttacggggacgatttacatatttaagcct 37133709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 532 - 601
Target Start/End: Complemental strand, 15135518 - 15135449
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta 601  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  15135518 gcgtttttgtaacaaaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggttgtttta 15135449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 8231304 - 8231368
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  8231304 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 8231368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 32882388 - 32882452
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  32882388 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 32882452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 40028843 - 40028779
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  40028843 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 40028779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 45276777 - 45276713
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  45276777 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 45276713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 535 - 674
Target Start/End: Original strand, 11671208 - 11671347
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    |||||||||| || | ||||| ||||||||||||||||||  ||  |||||||||||| |||||||| |||       ||| || |||||||||| ||||    
T  11671208 tttttgtaacagatgctgacgagagggacgaaaatcaaaacatttgtaacttacagggtttgttttagaacaaaaatagatacatggacgaaaacaaaaa 11671307  T
Q  635 acacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||| || |||| |||||||||||||||||||| ||||    
T  11671308 acacgcgaacttacggggacgatttacatatttaaaccta 11671347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 532 - 673
Target Start/End: Complemental strand, 12178623 - 12178482
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||||| |||| |||||| |||  |||||| |||| ||||||||||  ||||||||| | |||||||| |||       ||| |||||||||||||||    
T  12178623 gcgtttttttaacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagagtttgttttagaacaaaaaaagatacagggacgaaaacca 12178524  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||| || ||| ||||||  |||||||||||||||||    
T  12178523 aaaacacgcgaacttagagggaccttttacatatttaagcct 12178482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 31393333 - 31393397
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  31393333 gatgaatttatgaagacaatgatggagatgtaaaagaggtggaaggaagaagatgaagaaagcta 31393397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 535 - 671
Target Start/End: Complemental strand, 37131972 - 37131836
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||  ||||||||| |  || ||||| |||       ||| |||| ||||||||||||     
T  37131972 tttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacatgagttattttagaacaaaaaaagatacaggaacgaaaaccaaac 37131873  T
Q  635 acacgccaaattacagggacgatttacatatttaagc 671  Q
    |||||| || ||||  |||||||||||||||||||||    
T  37131872 acacgcgaacttacgtggacgatttacatatttaagc 37131836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 673
Target Start/End: Original strand, 30792749 - 30792896
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta----aaacnnnnnnngatgcagggacgaaa 627  Q
    |||||||||||||  |  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    |||        ||| || ||| ||||    
T  30792749 gcgtttttgtaacaaagtttgacgggagggacgaaaagcaaaaagttattaacttacaggggttgttttagaagaaaaaaaataagatacatggaagaaa 30792848  T
Q  628 ac--caaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||   |||||||||||||||||||| | ||||||||||||||||||||    
T  30792849 acaaaaaaaacacgccaaattacagagtcgatttacatatttaagcct 30792896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 11747532 - 11747478
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaactt 586  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  11747532 gcgtttttgtaacggaagtagacgggagggacggaaatcaaaaaattattaactt 11747478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 706798 - 706741
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||| |||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  706798 cagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagccta 706741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 531 - 672
Target Start/End: Complemental strand, 11669982 - 11669841
Alignment:
Q  531 tgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacc 630  Q
    ||||||||||||||||||||| |||  |||||| |||||||||| ||||  |||||||||||   |||||| |||         | || |||||||||||    
T  11669982 tgcgtttttgtaacggaagttaacgttagggactaaaatcaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacatggacgaaaacc 11669883  T
Q  631 aaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||| || || ||||||||||  ||||||||||||||||    
T  11669882 aaaaacatgcgaacttacagggaccgtttacatatttaagcc 11669841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 618 - 674
Target Start/End: Original strand, 21914643 - 21914699
Alignment:
Q  618 agggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||||    
T  21914643 agggacgaaaaccaaaaacacaccaaattacagggacggtttgcatatgtaagccta 21914699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 674
Target Start/End: Original strand, 43546651 - 43546791
Alignment:
Q  534 gtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaa 633  Q
    ||||||||||||| |||| ||||||||||||||   ||||  | || ||||||||| ||||  |||||||||        || |||||||||    ||||    
T  43546651 gtttttgtaacgggagttaacgggagggacgaattgcaaacggctagtaacttacaaggatgattttaaaacaaaaaaaaatacagggacgatttgcaaa 43546750  T
Q  634 aacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  43546751 aacacgcgaaattacagggacgttttacatatttaagccta 43546791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 620 - 674
Target Start/End: Original strand, 708159 - 708213
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||| |||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  708159 ggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagccta 708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 509 - 672
Target Start/End: Complemental strand, 37348898 - 37348735
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    |||||||||||||| ||||||   | |||||||||| ||   |||||| | |||| |||| ||||| |||  ||||||||| ||||||||||| |||       
T  37348898 gtcatcctccgttttccacatagacatttttgtaacagataatgacggcatggactaaaaccaaaacgtttataacttacaaggattgttttagaacaaa 37348799  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
        |||  |||||| |||||||||||||||| || |||| ||||| ||||||| |||||||||    
T  37348798 aaatgatatagggactaaaaccaaaaacacgcgaacttacggggaccatttacaaatttaagcc 37348735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 533 - 601
Target Start/End: Original strand, 9532534 - 9532602
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta 601  Q
    |||||||||||| ||  |||| |||||||||||||| |||||||||||||| |||| ||| ||||||||    
T  9532534 cgtttttgtaacagagtttgatgggagggacgaaaagcaaaaagttattaatttactggggttgtttta 9532602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 674
Target Start/End: Complemental strand, 28848600 - 28848556
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  28848600 caaaaacacgcgaaattacagggacgttttacatatttaagccta 28848556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 31393485 - 31393525
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  31393485 tccctctcactgtgtgactcatcaataagtttgccacgtca 31393525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 618 - 673
Target Start/End: Complemental strand, 3704452 - 3704397
Alignment:
Q  618 agggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||    
T  3704452 agggacgaaaaccaaaaacaagcgaacttacatggacgatttacctatttaagcct 3704397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 630 - 673
Target Start/End: Complemental strand, 25008134 - 25008091
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  25008134 caaaaacacgcgaaattacagggacgttttacatatttaagcct 25008091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 543 - 586
Target Start/End: Original strand, 31734685 - 31734728
Alignment:
Q  543 acggaagttgacgggagggacgaaaatcaaaaagttattaactt 586  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  31734685 acggaagttgacgggaggaacgaaaatcaaaaatttattaactt 31734728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 21716463 - 21716497
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  21716463 tccctctcactgtgtgactcatcaataagtttgcc 21716497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 511
Target Start/End: Complemental strand, 40028689 - 40028651
Alignment:
Q  473 ccctctcactgtgtgactcatcaataagtttgcctcgtc 511  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  40028689 ccctctcactgtgtgactcatcaataagtttgccacgtc 40028651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 40029873 - 40029907
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  40029873 tccctctcactgtgtgactcatcaataagtttgcc 40029907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 45276624 - 45276590
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  45276624 tccctctcactgtgtgactcatcaataagtttgcc 45276590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 674
Target Start/End: Original strand, 31734766 - 31734815
Alignment:
Q  625 aaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||| || ||||| ||||||||||||| ||||||||||    
T  31734766 aaaaccaaaaacacgcgaacttacaaggacgatttacatgtttaagccta 31734815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 8231460 - 8231500
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  8231460 tccctctcactgggtgactcatcaataagtttgccacgtca 8231500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 618 - 674
Target Start/End: Original strand, 9532625 - 9532681
Alignment:
Q  618 agggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||| |||||| |||||| ||| ||||||||| |||||| |||||||||||||||||    
T  9532625 agggccgaaaatcaaaaatacgtcaaattacaaggacgacttacatatttaagccta 9532681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 21715305 - 21715265
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  21715305 tccctctcactgtgtgactcatcaataagttttccacgtca 21715265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 32429874 - 32429930
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||| |||||||||||| |||||| ||||||||||  ||||| |||||||||||    
T  32429874 cagggactaaaaccaaaaacgcgccaacttacagggactttttacttatttaagcct 32429930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 32882541 - 32882573
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttg 504  Q
    |||||||||||||||||||||||||||||||||    
T  32882541 tccctctcactgtgtgactcatcaataagtttg 32882573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Complemental strand, 41591570 - 41591514
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||||| |||||  ||| |||||||||||||  |||||||||||||||||    
T  41591570 cagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaagcct 41591514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 673
Target Start/End: Original strand, 25009502 - 25009545
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||    
T  25009502 caaaaacacgcgaaattacagggacgttttacatattaaagcct 25009545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 550 - 588
Target Start/End: Complemental strand, 21914451 - 21914413
Alignment:
Q  550 ttgacgggagggacgaaaatcaaaaagttattaacttac 588  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  21914451 ttgacgggaggaacgaaaaacaaaaagttattaacttac 21914413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 620 - 674
Target Start/End: Original strand, 27162002 - 27162056
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||||||||| | ||| || ||||||||||  ||||||||||||||||||    
T  27162002 ggacgaaaaccaaaatctcgcgaacttacagggaccttttacatatttaagccta 27162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 617 - 675
Target Start/End: Original strand, 41385813 - 41385871
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcctac 675  Q
    ||||||| ||||| |||||  ||| || |||||||||| ||||||||||||||||||||    
T  41385813 cagggaccaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaagcctac 41385871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 548 - 601
Target Start/End: Original strand, 11748887 - 11748940
Alignment:
Q  548 agttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta 601  Q
    ||||||||| |||||||||| |||||||||||| |||||| | || ||||||||    
T  11748887 agttgacggtagggacgaaattcaaaaagttatcaacttataaggtttgtttta 11748940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 674
Target Start/End: Complemental strand, 21895423 - 21895366
Alignment:
Q  618 agggacgaaaaccaaaaa-cacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||| ||||| ||| ||||||||||  | |||||||||||||||||||||    
T  21895423 agggacgaaaacaaaaaaacacaccaaattacaaagtcgatttacatatttaagccta 21895366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 505
Target Start/End: Complemental strand, 31392291 - 31392258
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgc 505  Q
    |||||||||||||||| |||||||||||||||||    
T  31392291 tccctctcactgtgtgcctcatcaataagtttgc 31392258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 674
Target Start/End: Original strand, 38758321 - 38758378
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||| |||||||||||| ||| || ||||||||||  ||||| ||||||||||||    
T  38758321 cagggactaaaaccaaaaacgcgctaacttacagggaccttttacttatttaagccta 38758378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 223; Significance: 1e-122; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 37 - 267
Target Start/End: Original strand, 33733928 - 33734158
Alignment:
Q  37 tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgatttcg 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  33733928 tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgattttg 33734027  T
Q  137 atattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatgggaattttgtttgggtttgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33734028 atattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatggggattttgtttgggtttgt 33734127  T
Q  237 gagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||||||||||||||||    
T  33734128 gagaagttgtctattgagagtgagatgatga 33734158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 53528665 - 53528398
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnn-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagca 99  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53528665 tcaatgatgagacgagagttggtaatgaaaaaaaaaatcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagca 53528566  T
Q  100 ttcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaa 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  53528565 ttcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttagctgggactatgaacattgtggattttagtgttgagatgtcaa 53528466  T
Q  200 tctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53528465 tctgaccattgtcaattggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 53528398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 472 - 669
Target Start/End: Original strand, 33734361 - 33734558
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatca 571  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33734361 tccctctcactgtgtgactcatcaataagtttgccacgtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgatgggagggacgaaaatca 33734460  T
Q  572 aaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    ||||||||||||||||||||| |||||||| |||       ||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  33734461 aaaagttattaacttacaggggttgttttagaacaaaaaaagatacaggaaccaaaaccaaaaacacgctaaattacagggacgatttacatatttaa 33734558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 503 - 673
Target Start/End: Complemental strand, 53528139 - 53527969
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  53528139 tgccacgtcatcctctgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggagttgttttag 53528040  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||       ||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  53528039 aacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattaaagggacgatttacacatttaagcct 53527969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 508 - 673
Target Start/End: Complemental strand, 33733129 - 33732964
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||| |||      
T  33733129 cgtcatcgtccgtttgccacatgtgcgtttttgtaacggaagttgacgggaaggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 33733030  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
          || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33733029 aaaaaaatacaggaacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 33732964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 510 - 673
Target Start/End: Original strand, 53529431 - 53529594
Alignment:
Q  510 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnn 609  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | ||||| |||        
T  53529431 tcatcctccgtttgccacatgtgcatttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggctattttagaacaaaa 53529530  T
Q  610 nnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
       ||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  53529531 aaagatacagggacgaaaactaaaaatacgccaaattacagggacgatttacatatttaagcct 53529594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 532 - 672
Target Start/End: Original strand, 31796753 - 31796893
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||       ||| | |||||||||||||    
T  31796753 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaacca 31796852  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||| || ||||||||||  ||||||||||||||||    
T  31796853 aaaacacgcgaacttacagggaccttttacatatttaagcc 31796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 532 - 673
Target Start/End: Original strand, 40499171 - 40499312
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||       ||| | |||||||||||||    
T  40499171 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttaccggggttgttttagaacaaaaaaagatacggggacgaaaacca 40499270  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||| || ||||||||||  |||||||||||||||||    
T  40499271 aaaacacgcgaacttacagggaccttttacatatttaagcct 40499312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 41083189 - 41083332
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaac-nnnnnnngatgcagggacgaaaacc 630  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||        ||| | ||||||||||||    
T  41083189 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaaagatacggggacgaaaacc 41083288  T
Q  631 aaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||| || ||||||||||  ||||||||||||||||||    
T  41083289 aaaaacacgcaaacttacagggaccttttacatatttaagccta 41083332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 532 - 672
Target Start/End: Original strand, 48568449 - 48568589
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||        || | |||||||||||||    
T  48568449 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaaaatacggggacgaaaacca 48568548  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||| || |||||| |||  ||||||||||||||||    
T  48568549 aaaacacgcgaacttacagagaccttttacatatttaagcc 48568589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 532 - 669
Target Start/End: Complemental strand, 31657094 - 31656956
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaac-nnnnnnngatgcagggacgaaaacc 630  Q
    ||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||         || || |||||||||||    
T  31657094 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttacagggattgttttagaacaaaaaaaaaatacaaggacgaaaacc 31656995  T
Q  631 aaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  31656994 aaaaacatgccaaattacagggacgatttacatatttaa 31656956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 535 - 673
Target Start/End: Complemental strand, 41081939 - 41081801
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||| |||       ||| ||||||||||||||||||    
T  41081939 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 41081840  T
Q  635 acacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||| || ||||||||||  |||||||||||||||||    
T  41081839 acacgcgaacttacagggaccttttacatatttaagcct 41081801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 535 - 673
Target Start/End: Complemental strand, 48567133 - 48566995
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||| |||       ||| ||| ||||||||||||||    
T  48567133 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagtgacgaaaaccaaaa 48567034  T
Q  635 acacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||| || ||||||||||  |||||||||||||||||    
T  48567033 acacgcaaacttacagggaccttttacatatttaagcct 48566995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 535 - 689
Target Start/End: Complemental strand, 31795510 - 31795356
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||| |||       ||| ||||| ||||||||||||    
T  31795510 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggccgaaaaccaaaa 31795411  T
Q  635 acacgccaaattacagggacgatttacatatttaagcctactttctttcatgagt 689  Q
    |||||| || ||||||||||  ||||| |||||||||| | ||| ||| ||||||    
T  31795410 acacgcgaacttacagggaccttttacgtatttaagccaatttttttttatgagt 31795356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 33734208 - 33734272
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33734208 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 33734272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 535 - 669
Target Start/End: Complemental strand, 30700433 - 30700299
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    |||||||||| || | |||||| |||||| |||| ||||| |||  ||||||||||||  ||||||| |||       ||| || |||||||||||||||    
T  30700433 tttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataacttacagggtgtgttttagaacaaaaaaagatacaaggacgaaaaccaaaa 30700334  T
Q  635 acacgccaaattacagggacgatttacatatttaa 669  Q
    |||||| || ||| || ||||||||||||||||||    
T  30700333 acacgcgaacttaaagagacgatttacatatttaa 30700299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 53528338 - 53528277
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| |   ||||||||||| ||||||| |||||||||||||||||||||||||    
T  53528338 gatgaatttatgaagac---gatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 53528277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 32558974 - 32558917
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||    
T  32558974 cagggacgaaaacaaaaaacacgcgaacttacagggaccttttacatatttaagccta 32558917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 560 - 674
Target Start/End: Complemental strand, 41880036 - 41879922
Alignment:
Q  560 ggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgattt 659  Q
    ||||||||||||||| |||  ||||||||| || |||||||| |||       ||| ||| |||||||||||||||||| | || ||||||  |||||||    
T  41880036 ggacgaaaatcaaaacgtttataacttacaaggtttgttttagaacaaaaaaagatacagagacgaaaaccaaaaacacacgaacttacagaaacgattt 41879937  T
Q  660 acatatttaagccta 674  Q
    |||||||||| ||||    
T  41879936 acatatttaaaccta 41879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 617 - 669
Target Start/End: Complemental strand, 22942391 - 22942339
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    |||||| |||||||||||||| || || |||||||||||||||||||||||||    
T  22942391 cagggatgaaaaccaaaaacaagcgaacttacagggacgatttacatatttaa 22942339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 630 - 673
Target Start/End: Complemental strand, 8391443 - 8391400
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  8391443 caaaaacacgcgaaattacagggacgttttacatatttaagcct 8391400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 53529378 - 53529412
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  53529378 tccctctcactgtgtgactcatcaataagtttgcc 53529412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 472 - 504
Target Start/End: Complemental strand, 33733198 - 33733166
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttg 504  Q
    |||||||||||||||||||||||||||||||||    
T  33733198 tccctctcactgtgtgactcatcaataagtttg 33733166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 672
Target Start/End: Complemental strand, 31199304 - 31199249
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||||||||| |||| |||| |||||||||||||  |||||||||| |||||    
T  31199304 cagggacgaaaacctaaaatacgcgaaattacagggaccttttacatattcaagcc 31199249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 673
Target Start/End: Complemental strand, 45981449 - 45981406
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||    
T  45981449 caaaaacacgcgaaattacaaggacgttttacatatttaagcct 45981406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 53528188 - 53528154
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||| ||||||||||||||||||||||||    
T  53528188 tccctctcaccgtgtgactcatcaataagtttgcc 53528154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 674
Target Start/End: Original strand, 3150023 - 3150080
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||| |||||||||||| ||  || ||||||||||  ||||||||||||||||||    
T  3150023 cagggactaaaaccaaaaacgcgttaacttacagggaccttttacatatttaagccta 3150080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 673
Target Start/End: Original strand, 30701847 - 30701900
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||||||||||||| || ||| |||   |||||||||||||||||||    
T  30701847 ggacgaaaaccaaaaacacgcgaacttaaaggagtgatttacatatttaagcct 30701900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 1418099 - 1417833
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1418099 tcaatgatgagacgagagttggtaatgaaaaaaaaatcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 1418000  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  1417999 tcacagtgaggattttgttgttataatttgattttgatattatcaataaaagtttatttaggactatgaacattgtggattttagtgttgagatgtcaat 1417900  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  1417899 ctgaccattgtcaatggggattttgattgggtttgtgagaagttgtctattgagagtgagatgatga 1417833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 30333383 - 30333646
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30333383 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagaattttgtgaattttt-caatattgggaattcgagcat 30333480  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30333481 tcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttagt-gggactatgaacattgtggattttagtgttgagatgtcaat 30333579  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30333580 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagggagatgatga 30333646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 37 - 267
Target Start/End: Complemental strand, 25915346 - 25915115
Alignment:
Q  37 tcattctttaggttttt-caatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgatttc 135  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||     
T  25915346 tcattctttaggttttttcaatttgagaattttgtgaattttttcaatattgggaatttgagcattcacaatgaggattttgttgttatgatttgatttt 25915247  T
Q  136 gatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatgggaattttgtttgggtttg 235  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25915246 gatattatcaataaaagtttagctgggactatgaacattgtggattttagtgttgagatgtcaatctgaccattgtcaatggggattttgtttgggtttg 25915147  T
Q  236 tgagaagttgtctattgagagtgagatgatga 267  Q
    || |||||||||||||||||||||||||||||    
T  25915146 tgggaagttgtctattgagagtgagatgatga 25915115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 508 - 672
Target Start/End: Original strand, 1418831 - 1418995
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||      
T  1418831 cgtcatcctccgtttgccgcatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 1418930  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
         ||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  1418931 aaaaagatacagggacgaaaacaaaaaacacgtcaaattacagggacgatttacatatttaagcc 1418995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 503 - 672
Target Start/End: Complemental strand, 30332452 - 30332283
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||     
T  30332452 tgccacgtcatcctccgttttccacatgtgcgtttttgtaacggaagttgacaggagggacgaaaatcaaaaagttattaacttataggggttgttttag 30332353  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||       ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  30332352 aacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagcc 30332283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 510 - 670
Target Start/End: Original strand, 25916175 - 25916335
Alignment:
Q  510 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnn 609  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| |||        
T  25916175 tcatcctccgtttaccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaattaaaaagttattaacttataggggttgttttagaacaaaa 25916274  T
Q  610 nnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaag 670  Q
       ||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  25916275 aaagatacagggacaaaaaccaaaaacacgccaaattacatggacgatttacatatttaag 25916335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 509 - 673
Target Start/End: Original strand, 30333904 - 30334067
Alignment:
Q  509 gtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnn 608  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||       
T  30333904 gtcatcctccgtttgccacatgtgcgtttt-gtaatggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaa 30334002  T
Q  609 nnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
        ||| ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  30334003 aaaagatacagggacaaaaaccaaaaacacgccaaattatagggacgacttacatatttaagcct 30334067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 503 - 670
Target Start/End: Complemental strand, 25914659 - 25914493
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  25914659 tgccacgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaactaacaggggttgttttaa 25914560  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||       ||| ||  |||| |||| |||||||||||||||||||   ||||||||| ||||||||    
T  25914559 aac-aaaaaagatacaaagacggaaacaaaaaacacgccaaattacattaacgatttacgtatttaag 25914493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 532 - 673
Target Start/End: Complemental strand, 38624856 - 38624715
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||       ||| | |||||||||||||    
T  38624856 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacggggacgaaaacca 38624757  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||| || ||||||||||  |||||||||||||||||    
T  38624756 aaaacacgcgaacttacagggaccttttacatatttaagcct 38624715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 535 - 672
Target Start/End: Original strand, 17554925 - 17555063
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacg-aaaaccaaa 633  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||        || |||||||| |||||||||    
T  17554925 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttgcaggggttgttttagaacaaaaaataatacagggacgaaaaaccaaa 17555024  T
Q  634 aacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||| || ||||| |||| |||||||||||||||||    
T  17555025 aacacgcgaacttacatggacaatttacatatttaagcc 17555063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 508 - 592
Target Start/End: Complemental strand, 1417575 - 1417491
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggg 592  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1417575 cgtcatcctccgtttgccacatgtgcggtattgtaacggaagttgacgggagggacgaaaataaaaaagttattaacttacaggg 1417491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 535 - 672
Target Start/End: Original strand, 8874196 - 8874333
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    |||||||||| ||  |||||| ||||||| |||| ||||||||||||||||||||||| |||||||| |||        || ||||||||||||||||||    
T  8874196 tttttgtaacagagtttgacgagagggacaaaaagcaaaaagttattaacttacaggggttgttttagaacaaaaaaatatacagggacgaaaaccaaaa 8874295  T
Q  635 acacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||| | ||||||||||||||||||||||||||||||||    
T  8874296 acaggtcaaattacagggacgatttacatatttaagcc 8874333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 532 - 671
Target Start/End: Complemental strand, 39101855 - 39101716
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||       ||  |||  ||||||||||    
T  39101855 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacatacaggggttgttttagaacaaaaaaagacacagaaacgaaaacca 39101756  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    ||||| | ||||||||||||||||||||||||||||||||    
T  39101755 aaaacgcaccaaattacagggacgatttacatatttaagc 39101716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 532 - 670
Target Start/End: Complemental strand, 8872659 - 8872522
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  |||||||| |||||||||| ||||||||||||||||||  ||| |||||||| |||       ||| |||| ||||||||||    
T  8872659 gcgtttttgtaacagagtttgacggg-gggacgaaaagcaaaaagttattaacttatgggggttgttttagaacaaaaaaagatacaggaacgaaaacca 8872561  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaag 670  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8872560 aaaacacgccaaattacagggacgaattacatatttaag 8872522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 39103330 - 39103472
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||  ||  ||||||||||||||||||  |||||||||||||||||| | || |||||||| |||       ||| | || ||||||||||    
T  39103330 gcgtttttgtaatagagtttgacgggagggacgaaacgcaaaaagttattaacttatacgggttgttttagaacaaaaaaagatactggaacgaaaacca 39103429  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  39103430 aaaacacgccaaattacaaggacgatttacatatttaagccta 39103472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 535 - 670
Target Start/End: Complemental strand, 36619682 - 36619546
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnn-gatgcagggacgaaaaccaaa 633  Q
    |||||||||| ||  ||||||||||||||||||| ||||||| |||||||||| |||| |||||||| |||        ||| |||||||||||| ||||    
T  36619682 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagctattaacttataggggttgttttagaacaaaaaaaagatacagggacgaaaatcaaa 36619583  T
Q  634 aacacgccaaattacagggacgatttacatatttaag 670  Q
    |||||||||||||| ||||||||||||||||||||||    
T  36619582 aacacgccaaattatagggacgatttacatatttaag 36619546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 535 - 673
Target Start/End: Original strand, 38626092 - 38626230
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||| |||       ||| || |||||||||||||||    
T  38626092 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaa 38626191  T
Q  635 acacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||| || || ||||||||||  |||||||||||||||||    
T  38626192 acatgcgaacttacagggaccttttacatatttaagcct 38626230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 536 - 640
Target Start/End: Original strand, 11772623 - 11772727
Alignment:
Q  536 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaa 635  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||| |||       ||| | |||||||||||||||||    
T  11772623 ttttgtaacggaagttgacaggagggacgaaaatcaaaaagttattaacttacaagggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaa 11772722  T
Q  636 cacgc 640  Q
    |||||    
T  11772723 cacgc 11772727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 36621145 - 36621287
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||  |||| || |||||||| |||       ||| |  ||||||||||||    
T  36621145 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaatgtacaagggttgttttagaacaaaaaaagatacgtggacgaaaacca 36621244  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    || || | |||||||||||| ||||||||||||||||||||||    
T  36621245 aagacgcaccaaattacaggaacgatttacatatttaagccta 36621287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 1417780 - 1417716
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1417780 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 1417716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 532 - 674
Target Start/End: Original strand, 27756704 - 27756846
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||||||||||  | | |||||| |||||| |||| ||||| |||  ||| |||||||| |||||||| |||       ||| ||||||||||||| |    
T  27756704 gcgtttttgtaacaaatgctgacggcagggaccaaaagcaaaatgtttataatttacagggtttgttttagaacaaaaaaagatacagggacgaaaacaa 27756803  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||| || ||| ||||||||||||||||||||||||||    
T  27756804 aaaacacgcgaacttagagggacgatttacatatttaagccta 27756846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 673
Target Start/End: Complemental strand, 16308620 - 16308564
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  16308620 cagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcct 16308564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 25914857 - 25914793
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  25914857 gatgaatttatgaagacaatgatgaatatgtaaaagaggtggaaggaagaagatgaagaaagcta 25914793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 535 - 669
Target Start/End: Complemental strand, 11771335 - 11771201
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||| | |||||||||| |||||||||||| ||||||||||| |||||||||||        ||| |||||||||||| |||||    
T  11771335 tttttttaacagaagttgacagtagggacgaaattcaaaaagttatcaacttacagggtttgttttaaaaaaaaaaaagatacagggacgaaaatcaaaa 11771236  T
Q  635 acacgccaaattacagggacgatttacatatttaa 669  Q
    |||||| || ||||  | ||  |||||||||||||    
T  11771235 acacgcaaacttactcgaaccttttacatatttaa 11771201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 535 - 601
Target Start/End: Complemental strand, 17552108 - 17552041
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaa-atcaaaaagttattaacttacagggattgtttta 601  Q
    ||||| |||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  17552108 tttttttaacagaagttgacgagagggacgaaatatcaaaaagttattaacttgcagggattgtttta 17552041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 384
Target Start/End: Original strand, 30333704 - 30333763
Alignment:
Q  325 atttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    |||||||||| |||||||||||||||  |||||| |||||||||||||||||||||||||    
T  30333704 atttatgaagacaatgatgaagatgtataagaggtggaaggaagaagatgaagaaagcta 30333763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 25916104 - 25916144
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  25916104 tccctctcactgtgtgactcatcaataagtttgccacgtca 25916144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 631 - 674
Target Start/End: Original strand, 16182608 - 16182651
Alignment:
Q  631 aaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  16182608 aaaaacacgccaaattatagggacaatttacatatttaagccta 16182651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 1417626 - 1417592
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  1417626 tccctctcactgtgtgactcatcaataagtttgcc 1417592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 1418780 - 1418814
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  1418780 tccctctcactgtgtgactcatcaataagtttgcc 1418814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 25914705 - 25914671
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  25914705 tccctctcactgtgtgactcatcaataagtttgcc 25914671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 622 - 671
Target Start/End: Original strand, 18201354 - 18201403
Alignment:
Q  622 acgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    |||||||| |||||||||| || |||||||||| ||||||||||||||||    
T  18201354 acgaaaacaaaaaacacgcaaacttacagggacaatttacatatttaagc 18201403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 532 - 671
Target Start/End: Original strand, 16310018 - 16310157
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| || | |||||| |||||| |||| ||||| |||  ||||||||| ||  ||||||| |||        ||  ||| ||||||||||    
T  16310018 gcgtttttgtaacagatgctgacggcagggaccaaaagcaaaatgtttataacttacaaggtctgttttagaacaaaaaaatatataggaacgaaaacca 16310117  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    ||||||  | || ||||| |||||||||||||||||||||    
T  16310118 aaaacatacgaacttacatggacgatttacatatttaagc 16310157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 472 - 506
Target Start/End: Original strand, 30333852 - 30333886
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||| ||||||||||||||||||||||||||||    
T  30333852 tccctcgcactgtgtgactcatcaataagtttgcc 30333886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 672
Target Start/End: Complemental strand, 42775462 - 42775420
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||    
T  42775462 caaaaacacgcgaaattacaggaacgttttacatatttaagcc 42775420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 673
Target Start/End: Original strand, 4285758 - 4285791
Alignment:
Q  640 ccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||| |||||||||||||||||    
T  4285758 ccaaattacagggacggtttacatatttaagcct 4285791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 1841121 - 1841386
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnntcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcat 100  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1841121 tcaatgatgagacgagagttggtaatgaaaaaaaa-tcattctttaggtttttcaatttgagaattttgtgaattgtttcaatattgggaattcgagcat 1841219  T
Q  101 tcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtcaat 200  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1841220 tcacaatgaggattttgttgttataattttattttgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgttaat 1841319  T
Q  201 ctgaccattgtcaatgggaattttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1841320 ctgaccattgtcaatggggattttgtttaggtttgtgagaagttgtctattgagagtgagatgatga 1841386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 500 - 672
Target Start/End: Original strand, 1841642 - 1841814
Alignment:
Q  500 gtttgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttt 599  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  1841642 gtttgccacgtcatccttcgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaataaaaaagttattaacttacaggggttgttt 1841741  T
Q  600 taaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    || |||       ||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  1841742 tagaacaaaaaaagatacagggacaaaaaccaaaaacacgccaaatttcagggacgatttacatatttaagcc 1841814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 508 - 669
Target Start/End: Complemental strand, 13947911 - 13947751
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||      
T  13947911 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 13947812  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
         ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13947811 aaaaagataca-ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 13947751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 508 - 669
Target Start/End: Complemental strand, 14089100 - 14088940
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||      
T  14089100 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 14089001  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 669  Q
         ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14089000 aaaaagataca-ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 14088940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 508 - 673
Target Start/End: Complemental strand, 1840321 - 1840156
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||      
T  1840321 cgtcatcctctgtttgccacatgtgtgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaa 1840222  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
         ||| || | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1840221 aaaaagatacaagaacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 1840156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 532 - 673
Target Start/End: Complemental strand, 45499445 - 45499304
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||       ||| | |||||||||||||    
T  45499445 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaacca 45499346  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||| || ||||||||||  |||||||||||||||||    
T  45499345 aaaacacgcgaacttacagggaccttttacatatttaagcct 45499304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 532 - 674
Target Start/End: Complemental strand, 40303433 - 40303291
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||       ||| | |||||||||||||    
T  40303433 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacggggacgaaaacca 40303334  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||| || ||||||||||  ||||||||||||||||||    
T  40303333 aaaacacgcgaacttacagggaccttttacatatttaagccta 40303291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 535 - 673
Target Start/End: Complemental strand, 28563513 - 28563375
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    |||||||||| ||  ||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||        ||| || |||||||||||||||    
T  28563513 tttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttataggggttgttttagaagaaaaaaagatacaaggacgaaaaccaaaa 28563414  T
Q  635 acacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28563413 acacgccaaattacagggacgatttacatatttaagcct 28563375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 535 - 674
Target Start/End: Original strand, 45492954 - 45493093
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||| |||       ||| ||||||||||||||||||    
T  45492954 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 45493053  T
Q  635 acacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||| || ||||||||||  ||||||||||||||||||    
T  45493054 acacgcgaatttacagggaccttttacatatttaagccta 45493093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 535 - 674
Target Start/End: Original strand, 45500696 - 45500835
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||| |||       ||| ||||||||||||||||||    
T  45500696 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 45500795  T
Q  635 acacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||| || ||||||||||  ||||||||||||||||||    
T  45500796 acacgcgaatttacagggaccttttacatatttaagccta 45500835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 535 - 672
Target Start/End: Original strand, 40304684 - 40304821
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||| |||       ||| ||||||||||||||||||    
T  40304684 tttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaa 40304783  T
Q  635 acacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||| || ||||||||||  ||||||||||||||||    
T  40304784 acacgcgaacttacagggaccttttacatatttaagcc 40304821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 592
Target Start/End: Original strand, 13948485 - 13948578
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttt----tgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggg 592  Q
    |||| |||||||||| ||||| ||||||||||||||    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  13948485 tgccacgtcatcctctgtttgtcacatgtgcgttttaatttgtaacggaagttgacaggagggacgaaaataaaaaagttattaacttacaggg 13948578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 592
Target Start/End: Original strand, 14089692 - 14089785
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttt----tgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggg 592  Q
    |||| |||||||||| ||||| ||||||||||||||    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  14089692 tgccacgtcatcctctgtttgtcacatgtgcgttttaatttgtaacggaagttgacaggagggacgaaaataaaaaagttattaacttacaggg 14089785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 532 - 672
Target Start/End: Complemental strand, 16142366 - 16142226
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| || | ||||||||||| |||||||||||| |||  |||||||||||| |||||||| |||        || ||| |||||||||||    
T  16142366 gcgtttttgtaacagatgctgacgggagggccgaaaatcaaaacgtttgtaacttacagggtttgttttagaacagaaaaaaatacagagacgaaaacca 16142267  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||| || ||||| ||||||||||||||||| ||||    
T  16142266 aaaacacgcgaacttacaaggacgatttacatattttagcc 16142226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 1841442 - 1841502
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaa 380  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  1841442 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaa 1841502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 13948268 - 13948332
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  13948268 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggagggaagaagatgaagaaagcta 13948332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 14089475 - 14089539
Alignment:
Q  320 gatgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  14089475 gatgaatttatgaagacaatgatgaagatgtaaaagaggtggagggaagaagatgaagaaagcta 14089539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 534 - 673
Target Start/End: Original strand, 38729983 - 38730123
Alignment:
Q  534 gtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacg-aaaaccaa 632  Q
    ||||||||||| || | | |||| ||||||||||||||||| |||  |||||||||||| |||||||| |||       ||| |||||||| ||||||||    
T  38729983 gtttttgtaacagaggctaacggcagggacgaaaatcaaaaggtttgtaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaaccaa 38730082  T
Q  633 aaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||| || ||||| ||| |||||| ||||||||||||    
T  38730083 aaacacgcgaacttacaaggatgatttatatatttaagcct 38730123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 503 - 674
Target Start/End: Original strand, 16143486 - 16143657
Alignment:
Q  503 tgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaa 602  Q
    |||| ||||| || ||||| | |||||  |||||||| |||| |||||| |||  |||||| |||| ||||||||||  ||||||||||| ||||||||     
T  16143486 tgccacgtcagccaccgttagacacatcagcgtttttttaacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagggtttgttttag 16143585  T
Q  603 aacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||       ||| |||||||||||| ||||||||||| |  |||| |||||  ||||||||||||||||||    
T  16143586 aacaaaaaaagatacagggacgaaaatcaaaaacacgcaagcttacggggaccttttacatatttaagccta 16143657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 13948172 - 13948217
Alignment:
Q  222 tttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13948172 tttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 13948217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 14089379 - 14089424
Alignment:
Q  222 tttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14089379 tttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 14089424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 551 - 673
Target Start/End: Complemental strand, 38728305 - 38728184
Alignment:
Q  551 tgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacag 650  Q
    |||||||||||||||||||||||| |||  |||||| ||||| |||||||| |||       ||| || ||||||||||||||||| ||  || ||||||    
T  38728305 tgacgggagggacgaaaatcaaaacgtttgtaacttgcagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaactcgtgaacttacag 38728206  T
Q  651 ggacgatttacatatttaagcct 673  Q
    |||||| ||||||||||||||||    
T  38728205 ggacga-ttacatatttaagcct 38728184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 620 - 673
Target Start/End: Original strand, 44421349 - 44421402
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  44421349 ggacgaaaacaaaaaacacgccaatttacagggatgatttacatatttaagcct 44421402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 620 - 670
Target Start/End: Original strand, 44465097 - 44465147
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  44465097 ggacgagaaccaaaaacacgcgaacttacagggacgatttacatatttaag 44465147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 532 - 670
Target Start/End: Complemental strand, 7317530 - 7317392
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    |||||| |||||| |||||| ||   |||||| |||| ||||||||||  |||||| |||| |||||||| |||       ||| || ||||||||||||    
T  7317530 gcgtttatgtaacagaagttaacattagggaccaaaaccaaaaagttaacaacttatagggtttgttttagaacaaaaaaagatacaaggacgaaaacca 7317431  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaag 670  Q
    ||||||||| || |||||||||   ||||||||||||||    
T  7317430 aaaacacgcgaacttacagggatcttttacatatttaag 7317392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 617 - 674
Target Start/End: Original strand, 18161047 - 18161104
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||| ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||    
T  18161047 caggtacgaaaagcaaaaacacgccaaattatatggacgatttacatatttaaaccta 18161104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 618 - 671
Target Start/End: Original strand, 22060485 - 22060538
Alignment:
Q  618 agggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    ||||||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  22060485 agggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagc 22060538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 13948421 - 13948461
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  13948421 tccctctcactgtgtgactcatcaataagtttgccacgtca 13948461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Complemental strand, 14089169 - 14089129
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  14089169 tccctctcactgtgtgactcatcaataagtttgccacgtca 14089129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 14089628 - 14089668
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtca 512  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  14089628 tccctctcactgtgtgactcatcaataagtttgccacgtca 14089668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 18224849 - 18224905
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||| |||||||||||||| | |||||||||||||  |||||||||||||||||    
T  18224849 cagggactaaaaccaaaaacacactaaattacagggaccttttacatatttaagcct 18224905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 604
Target Start/End: Complemental strand, 44095495 - 44095423
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaa 604  Q
    |||||||||||||||||||| |||  |||||| |||| ||||| ||||  ||||||||||| |||||||||||    
T  44095495 gcgtttttgtaacggaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttaaaa 44095423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 1840390 - 1840356
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  1840390 tccctctcactgtgtgactcatcaataagtttgcc 1840356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 13947962 - 13947928
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  13947962 tccctctcactgtgtgactcatcaataagtttgcc 13947928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 672
Target Start/End: Complemental strand, 20587081 - 20587039
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  20587081 caaaaacacgcgaaattacagggacgttttacatatttaagcc 20587039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 672
Target Start/End: Original strand, 20588476 - 20588518
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  20588476 caaaaacacgcgaaattacagggacgttttacatatttaagcc 20588518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 674
Target Start/End: Complemental strand, 22053281 - 22053123
Alignment:
Q  515 ctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnnga 614  Q
    ||||||||||||  |  ||||||||||||| |||||| |||  |||||| |||| ||||| |||  |||||||| ||| |||||||| |||       ||    
T  22053281 ctccgtttgccagctcagcgtttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttacgggg-ttgttttagaacaaaaaaaga 22053183  T
Q  615 tgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    | ||||||||||||| |||||||||| || |||||  |||  ||||||||||||| ||||    
T  22053182 tacagggacgaaaacaaaaaacacgcgaacttacaaagaccttttacatatttaaaccta 22053123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 673
Target Start/End: Complemental strand, 35588179 - 35588126
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||||||| ||||| || ||||| ||||||||| |||||||||||||    
T  35588179 ggacgaaaaccaaaagcacgcgaacttacatggacgatttccatatttaagcct 35588126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 674
Target Start/End: Original strand, 13948615 - 13948659
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  13948615 caaaaacatgccaaattacaaggacgatttacatatttaacccta 13948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 674
Target Start/End: Original strand, 14089822 - 14089866
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  14089822 caaaaacatgccaaattacaaggacgatttacatatttaacccta 14089866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 674
Target Start/End: Original strand, 18159885 - 18159929
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||    
T  18159885 caaaaacacgccaaattatatggacgatttacatatttaaaccta 18159929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 622 - 674
Target Start/End: Complemental strand, 18308242 - 18308190
Alignment:
Q  622 acgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||| |||||||||| ||||||| | ||||||||||||||||||| ||||    
T  18308242 acgaaaaacaaaaacacgtcaaattatatggacgatttacatatttaaaccta 18308190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Complemental strand, 22054389 - 22054333
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||  ||| || ||||||||||  |||||||||||||||||    
T  22054389 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 22054333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Complemental strand, 43516453 - 43516397
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||||| |||||  ||| |||||||||||||  |||||||||||||||||    
T  43516453 cagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaagcct 43516397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 44097357 - 44097413
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||||||| || |||||| |||  |||| ||||||||||||    
T  44097357 cagggacgaaaaccaaaaacacgcgaacttacagagaccttttatatatttaagcct 44097413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 618 - 674
Target Start/End: Original strand, 44492316 - 44492372
Alignment:
Q  618 agggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||||||||||||||||| || ||||| |||   ||||||||||||||||||    
T  44492316 agggacgaaaaccaaaaacacgcaaacttacatggatcgtttacatatttaagccta 44492372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 674
Target Start/End: Original strand, 6844042 - 6844158
Alignment:
Q  558 agggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgat 657  Q
    |||||| |||| ||||||| ||  |||||||| || |||||||| |||       ||| || ||| ||||||||||||||||| || ||||| ||||  |    
T  6844042 agggactaaaaccaaaaagctaacaacttacaaggtttgttttagaacaaaaaaagatacaaggatgaaaaccaaaaacacgcgaacttacaaggacctt 6844141  T
Q  658 ttacatatttaagccta 674  Q
    |||||||||||||||||    
T  6844142 ttacatatttaagccta 6844158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 13948138 - 13948173
Alignment:
Q  139 attatcaataaaagtttagttgggactatgaacatt 174  Q
    ||||||||||||| ||||||||||||||||||||||    
T  13948138 attatcaataaaaatttagttgggactatgaacatt 13948173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 14089345 - 14089380
Alignment:
Q  139 attatcaataaaagtttagttgggactatgaacatt 174  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14089345 attatcaataaaaatttagttgggactatgaacatt 14089380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 620 - 674
Target Start/End: Complemental strand, 34591777 - 34591723
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||| ||||| || | || ||||| ||||||||||||||||||||||||    
T  34591777 ggacgaaaacaaaaaatacacaaacttacatggacgatttacatatttaagccta 34591723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 28165713 - 28165656
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||| |||||||||||| ||| || ||||| ||||  ||||||||||||||||||    
T  28165713 cagggactaaaaccaaaaacgcgctaacttacatggaccttttacatatttaagccta 28165656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 601
Target Start/End: Original strand, 44097270 - 44097339
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta 601  Q
    ||||||||||||| |||||| |||  |||||| |||| ||||| ||||  ||||||||||| ||||||||    
T  44097270 gcgtttttgtaacagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgtttta 44097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 673 - 866
Target Start/End: Complemental strand, 33705127 - 33704934
Alignment:
Q  673 tactttctttcatgagtaatgttgataaatggataagaaaattcattttgttaggggatattaaccaaacaaaattggttaatgttgcttgacataaact 772  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33705127 tactttctttcatgagtaatgttgataaatggataagaaaattcattttgttaggggatattaaccaaagaaaattggttaatgttgcttgacataaact 33705028  T
Q  773 ttgtacttccattaaggagtgccccttggaattagatccttcatacagattaatgaagcacttctgggatcttctcacctctaataaccaatgg 866  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33705027 ttgtacttccattaaggagtgccccttggaattagatccttcacacagattaatgaagcacttctgggatcttctcacctctaataaccaatgg 33704934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 19083527 - 19083725
Alignment:
Q  1 tcaatgatgagacgagagttggtaatgnnnnnnnnn-tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagca 99  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19083527 tcaatgatgagacgagagttggtaatgaaaaaaaaaatcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagca 19083626  T
Q  100 ttcacaatgaggattttgttgttataatttgatttcgatattatcaataaaagtttagttgggactatgaacattgtggattttagtgttgagatgtca 198  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||    
T  19083627 ttcacaatgaggattttgttgttataatttgattttgatattatcaataaaagtttatttatgactatgaacattgtggattttagtgttgagttgtca 19083725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 508 - 671
Target Start/End: Original strand, 19084015 - 19084178
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||      
T  19084015 cgtcatcctccatttgccacatgtgcgttattgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacatacaggggttgttttagaacaa 19084114  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagc 671  Q
         ||| ||||||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  19084115 aaaaagatacagggacaaaaaccaaaaacacgctaaattacagggacggtttacatatttaagc 19084178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 532 - 672
Target Start/End: Complemental strand, 8745572 - 8745432
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||| ||| |||||||| |||       |||  ||||||||||||||    
T  8745572 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttacgggggttgttttagaacaaaaaaagatatagggacgaaaacca 8745473  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8745472 aaaacacgccaaattacagggacgatttacatatttaagcc 8745432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 508 - 601
Target Start/End: Complemental strand, 19082830 - 19082737
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta 601  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  19082830 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttatatgggttgtttta 19082737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 532 - 673
Target Start/End: Original strand, 1258358 - 1258500
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagtt-attaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacc 630  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||| |||||| || |||| |||||||| |||       ||| ||||||||||||||    
T  1258358 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagtttattaacctataggggttgttttagaacaaaaaaagatacagggacgaaaacc 1258457  T
Q  631 aaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1258458 aaaaacacgccaaattacagggacgatttacatatttaagcct 1258500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 535 - 673
Target Start/End: Complemental strand, 1256851 - 1256713
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    |||||||||| ||  |||||||||||||||||||  ||||||||||||||||| |||| |||||||| ||        ||| ||||||||||||||||||    
T  1256851 tttttgtaacagagtttgacgggagggacgaaaagtaaaaagttattaacttataggggttgttttagaataaaaaaagatacagggacgaaaaccaaaa 1256752  T
Q  635 acacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1256751 acacgccaaattacaaggacgatttacatatttaagcct 1256713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 533 - 670
Target Start/End: Original strand, 8752720 - 8752857
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaa 632  Q
    ||||||||||||  |  ||||||||||||||||||| ||||| ||||||||||| ||||| |||||||| |||       ||| ||||||||||||||||    
T  8752720 cgtttttgtaacaaagtttgacgggagggacgaaaagcaaaaggttattaacttgcaggggttgttttagaacaaaaaaagatacagggacgaaaaccaa 8752819  T
Q  633 aaacacgccaaattacagggacgatttacatatttaag 670  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8752820 aaacacgccaaattacagagacgatttacatatttaag 8752857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 532 - 671
Target Start/End: Original strand, 2956154 - 2956293
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaacca 631  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||| ||  |||||||| |||       ||| || ||||||||||||    
T  2956154 gcgtttttgtaacagagtttgacgggagggacgaaaagcaaaaagttattaacttacgggagttgttttagaacaaaaaaagatacaaggacgaaaacca 2956253  T
Q  632 aaaacacgccaaattacagggacgatttacatatttaagc 671  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  2956254 aaaacacatcaaattacagggacgatttacatatttaagc 2956293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 510 - 673
Target Start/End: Original strand, 7678540 - 7678707
Alignment:
Q  510 tcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnn 609  Q
    ||||| |||||| ||||| |||  ||||||||||| |||| | |||||||||||||||| ||||| ||||  ||||||||||||  ||||| |||         
T  7678540 tcatcatccgttagccacgtgtatgtttttgtaacagaagctaacgggagggacgaaaagcaaaacgttaacaacttacagggacagttttgaaaagaaa 7678639  T
Q  610 nnn----gatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
           ||| || |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7678640 aaaaaaagatacaaggacaaaaagcaaaaacacgccaaattacagggacgatttacatatttaagcct 7678707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 19083725 - 19083772
Alignment:
Q  220 attttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  19083725 attttgattgggtttgtgagaagttgtctattgagagtgagatgatga 19083772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 19083831 - 19083875
Alignment:
Q  340 gatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  19083831 gatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 19083875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 533 - 672
Target Start/End: Complemental strand, 1443556 - 1443417
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaa 632  Q
    ||||||| ||||  ||||| |||  |||||| |||| ||||||||||  ||||||| ||| |||||||| |||        || ||||||||||||||||    
T  1443556 cgtttttttaacaaaagttaacgttagggactaaaaccaaaaagttaacaacttaccgggtttgttttagaacaaaaaaaaatacagggacgaaaaccaa 1443457  T
Q  633 aaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||  || ||||||||||  || |||||||||||||    
T  1443456 aaacacgtgaacttacagggacctttcacatatttaagcc 1443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 19082881 - 19082847
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcc 506  Q
    |||||||||||||||||||||||||||||||||||    
T  19082881 tccctctcactgtgtgactcatcaataagtttgcc 19082847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 10707731 - 10707674
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    ||||||||||||  |||||||||| || |||||||||| ||||| |||||||||||||    
T  10707731 cagggacgaaaataaaaaacacgcgaacttacagggacaatttatatatttaagccta 10707674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 729 - 782
Target Start/End: Complemental strand, 21188649 - 21188596
Alignment:
Q  729 gatattaaccaaacaaaattggttaatgttgcttgacataaactttgtacttcc 782  Q
    ||||||||||||| |||| |||||||||||||||| | |||||||||| |||||    
T  21188649 gatattaaccaaagaaaaatggttaatgttgcttggcttaaactttgttcttcc 21188596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 472 - 504
Target Start/End: Original strand, 19083964 - 19083996
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttg 504  Q
    |||||||||||||||||||||||||||||||||    
T  19083964 tccctctcactgtgtgactcatcaataagtttg 19083996  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 674
Target Start/End: Complemental strand, 19082724 - 19082695
Alignment:
Q  645 ttacagggacgatttacatatttaagccta 674  Q
    ||||||||||||||||||||||||||||||    
T  19082724 ttacagggacgatttacatatttaagccta 19082695  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 673
Target Start/End: Original strand, 28302171 - 28302224
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||| ||||| ||  |||||||||||||||| ||| |||||||||||||    
T  28302171 ggacgaaaatcaaaatcagcccaaattacagggacggtttgcatatttaagcct 28302224  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 673
Target Start/End: Complemental strand, 28509902 - 28509849
Alignment:
Q  620 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    ||||||||| ||||| ||  |||||||||||||||| ||| |||||||||||||    
T  28509902 ggacgaaaatcaaaatcagcccaaattacagggacggtttgcatatttaagcct 28509849  T

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Target: scaffold0489 (Bit Score: 128; Significance: 1e-65; HSPs: 5)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 6305 - 6468
Alignment:
Q  37 tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgatttcg 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6305 tcattctttaggtttttcaatttgagaattttgtgaattttttcaatattgggaattcgagcattcacaatgaggattttgttgttataatttgattttg 6404  T
Q  137 atattatcaataaaa-gtttagttgg-gactatgaacattgtggattttagtgttgagatgtca 198  Q
    ||||||||||||||| ||||| ||   ||||||||||||||||||||||||||||||| |||||    
T  6405 atattatcaataaaaagtttaatttatgactatgaacattgtggattttagtgttgagttgtca 6468  T

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Target: scaffold0489; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 472 - 678
Target Start/End: Complemental strand, 5581 - 5369
Alignment:
Q  472 tccctctcactgtgtgactcatcaataagtttgcctcgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaat-c 570  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||      
T  5581 tccctctcactgtgtgactcatcaataagtttgccacgtcatcctccgtttgtcacatgtgcgtttttgtaacggaagttgacgggagggacgaaaataa 5482  T
Q  571 aaaaagtt-attaacttacagggattgttttaaaacnnnnnnngat--gcagggacgaaaaccaaaaa--cacgccaaattacagggacgatttacatat 665  Q
    |||||||| ||||||||| |||| |||||||| |||         |   |||||||||||||||||||   |||||||||||||||||||||||||||||    
T  5481 aaaaagttaattaacttataggggttgttttagaacaaaaaaaagttaacagggacgaaaaccaaaaaacaacgccaaattacagggacgatttacatat 5382  T
Q  666 ttaagcctacttt 678  Q
    |||||||| ||||    
T  5381 ttaagccttcttt 5369  T

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Target: scaffold0489; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 508 - 674
Target Start/End: Original strand, 6710 - 6876
Alignment:
Q  508 cgtcatcctccgtttgccacatgtgcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnn 607  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||  | ||||| |||      
T  6710 cgtcatcctccatttgccacatgtgcgttattgtaacggaagttgacgggagggtagaaaatcaaaaagttattaacatacaggggatattttagaacaa 6809  T
Q  608 nnnnngatgcagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
         ||| |||| || |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6810 aaaaagatacaggaacaaaaaccaaaaacacgccaaattacagagacgatttacatatttaagccta 6876  T

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Target: scaffold0489; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 6569 - 6632
Alignment:
Q  321 atgaatttatgaagccaatgatgaagatgttaaagaggcggaaggaagaagatgaagaaagcta 384  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  6569 atgaatttatgaagacaatgatgaagatgtaaaagaggtggaaggaagaagatgaagaaagcta 6632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 6468 - 6515
Alignment:
Q  220 attttgtttgggtttgtgagaagttgtctattgagagtgagatgatga 267  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  6468 attttgattgggtttgtgagaagttgtctattgagagtgagatgatga 6515  T

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Target: scaffold0633 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 550 - 672
Target Start/End: Original strand, 6831 - 6953
Alignment:
Q  550 ttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaaacacgccaaattaca 649  Q
    |||||||||| |||||||| ||||||||||||||||||||| | |||||||| |||        || ||| |||||||||||||||||||||||||||||    
T  6831 ttgacgggagagacgaaaagcaaaaagttattaacttacagaggttgttttagaacaaaaaaatatacagagacgaaaaccaaaaacacgccaaattaca 6930  T
Q  650 gggacgatttacatatttaagcc 672  Q
    | |||||||||||||||||||||    
T  6931 gagacgatttacatatttaagcc 6953  T

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Target: scaffold1176 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 533 - 673
Target Start/End: Complemental strand, 2190 - 2050
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaa 632  Q
    |||||||||||| |||||| |||  |||||| |||| ||||| |||  |||||||| ||| |||||||| |||       ||| |||||||| |||||||    
T  2190 cgtttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttacgggggttgttttagaacaaaaaaagatacagggacggaaaccaa 2091  T
Q  633 aaacacgccaaattacagggacgatttacatatttaagcct 673  Q
    |||||||| || ||||| ||||  ||| |||||||||||||    
T  2090 aaacacgcgaacttacaaggacatttttcatatttaagcct 2050  T

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Target: scaffold0280 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 674
Target Start/End: Complemental strand, 12272 - 12129
Alignment:
Q  532 gcgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgtttta-aaacnnnnnnngatgcagggacgaaaacc 630  Q
    |||||||||| || |||||| |||  |||||| |||| ||||| ||||  ||||||||||| |||||||| |||        ||| ||||||||||||||    
T  12272 gcgtttttgtcacagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttagaaagaaaaaaagatacagggacgaaaacc 12173  T
Q  631 aaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||| || |||| || ||  ||||||||||||||||||    
T  12172 aaaaacacgcgaacttaccggaaccttttacatatttaagccta 12129  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 672
Target Start/End: Complemental strand, 193730 - 193591
Alignment:
Q  533 cgtttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaa 632  Q
    |||||||||||||| |||| ||||||||||||||   ||||  | |||||||||||| ||||  |||| ||||       ||| |||||||||    |||    
T  193730 cgtttttgtaacgggagttaacgggagggacgaattgcaaacggctattaacttacaaggatgattttgaaacaaaaaaagatacagggacgatttgcaa 193631  T
Q  633 aaacacgccaaattacagggacgatttacatatttaagcc 672  Q
    |||||||| ||||||||| |||| ||||||||||||||||    
T  193630 aaacacgcgaaattacagagacgttttacatatttaagcc 193591  T

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Target: scaffold0129 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 674
Target Start/End: Original strand, 4261 - 4318
Alignment:
Q  617 cagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 674  Q
    |||||||||||||||||||  ||| || ||||||||||  ||||||||||||||||||    
T  4261 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagccta 4318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1118 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 535 - 664
Target Start/End: Complemental strand, 2549 - 2420
Alignment:
Q  535 tttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacnnnnnnngatgcagggacgaaaaccaaaa 634  Q
    |||||||||| |||||| |||  |||||| |||| ||||| |    |||||||||||| |||||||||||        |||  |||||||||||||||||    
T  2549 tttttgtaacagaagttaacgttagggactaaaaccaaaacgcgtataacttacaggggttgttttaaaataaaaaaagatatagggacgaaaaccaaaa 2450  T
Q  635 acacgccaaattacagggacgatttacata 664  Q
    |||||| || ||||||||||  ||||||||    
T  2449 acacgcgaacttacagggaccttttacata 2420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 669
Target Start/End: Complemental strand, 7740 - 7701
Alignment:
Q  630 caaaaacacgccaaattacagggacgatttacatatttaa 669  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  7740 caaaaacacgcgaaattacagggacgttttacatatttaa 7701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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