View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12209_high_1 (Length: 325)

Name: NF12209_high_1
Description: NF12209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12209_high_1
NF12209_high_1
[»] chr5 (17 HSPs)
chr5 (14-325)||(38816628-38816932)
chr5 (115-190)||(19820428-19820503)
chr5 (35-164)||(22423764-22423895)
chr5 (123-190)||(22013364-22013431)
chr5 (116-190)||(42469171-42469245)
chr5 (33-82)||(8420075-8420124)
chr5 (116-165)||(15410483-15410532)
chr5 (116-168)||(6326332-6326384)
chr5 (35-87)||(9929668-9929720)
chr5 (67-151)||(3966492-3966577)
chr5 (117-175)||(15382442-15382500)
chr5 (33-63)||(24906250-24906280)
chr5 (118-151)||(6035472-6035505)
chr5 (115-151)||(17123037-17123073)
chr5 (128-168)||(21522722-21522762)
chr5 (128-168)||(21533288-21533328)
chr5 (115-151)||(27144452-27144488)
[»] chr7 (24 HSPs)
chr7 (116-190)||(27944991-27945065)
chr7 (116-190)||(24105629-24105702)
chr7 (65-147)||(29787354-29787435)
chr7 (115-168)||(11722132-11722185)
chr7 (67-177)||(24339605-24339716)
chr7 (84-165)||(19206025-19206107)
chr7 (67-151)||(32308109-32308194)
chr7 (35-145)||(11700798-11700909)
chr7 (115-175)||(1433419-1433479)
chr7 (35-195)||(7328639-7328805)
chr7 (119-190)||(2034392-2034462)
chr7 (115-166)||(2425767-2425818)
chr7 (115-190)||(43027503-43027578)
chr7 (116-175)||(43249958-43250017)
chr7 (115-157)||(8046061-8046103)
chr7 (84-151)||(22484014-22484082)
chr7 (115-157)||(23191879-23191921)
chr7 (115-165)||(26733279-26733329)
chr7 (72-146)||(30731031-30731104)
chr7 (75-148)||(11072290-11072362)
chr7 (34-63)||(17852091-17852120)
chr7 (117-166)||(49107795-49107844)
chr7 (35-63)||(15680900-15680928)
chr7 (115-151)||(20549780-20549816)
[»] chr6 (28 HSPs)
chr6 (67-168)||(10294079-10294181)
chr6 (115-175)||(9027143-9027203)
chr6 (115-190)||(853893-853968)
chr6 (67-175)||(16766662-16766771)
chr6 (115-175)||(5000660-5000720)
chr6 (35-175)||(5732474-5732604)
chr6 (122-190)||(8365560-8365628)
chr6 (116-188)||(12696277-12696348)
chr6 (35-165)||(8805524-8805656)
chr6 (67-175)||(9107355-9107464)
chr6 (115-166)||(9629357-9629408)
chr6 (115-190)||(30866178-30866253)
chr6 (116-190)||(6389693-6389767)
chr6 (115-165)||(9658854-9658904)
chr6 (115-153)||(19040339-19040377)
chr6 (122-190)||(3398569-3398637)
chr6 (115-175)||(7938081-7938141)
chr6 (116-164)||(13851712-13851760)
chr6 (35-82)||(426478-426525)
chr6 (116-175)||(7977865-7977924)
chr6 (115-158)||(20371144-20371187)
chr6 (33-63)||(34073276-34073306)
chr6 (72-175)||(34073337-34073441)
chr6 (115-168)||(426548-426601)
chr6 (35-76)||(2117134-2117175)
chr6 (115-156)||(7265627-7265668)
chr6 (115-167)||(8777007-8777059)
chr6 (115-175)||(34595099-34595159)
[»] chr8 (12 HSPs)
chr8 (67-168)||(22651948-22652050)
chr8 (67-173)||(29510289-29510396)
chr8 (122-190)||(25192388-25192456)
chr8 (115-181)||(926822-926888)
chr8 (115-168)||(27213519-27213572)
chr8 (122-190)||(126390-126457)
chr8 (115-190)||(13436998-13437073)
chr8 (115-158)||(31109552-31109595)
chr8 (115-177)||(24362236-24362298)
chr8 (115-148)||(39954313-39954346)
chr8 (115-155)||(31236611-31236651)
chr8 (82-158)||(37283812-37283887)
[»] chr2 (21 HSPs)
chr2 (79-190)||(21782817-21782927)
chr2 (128-190)||(33519736-33519798)
chr2 (115-190)||(20539708-20539783)
chr2 (84-175)||(4332891-4332981)
chr2 (115-165)||(21616737-21616787)
chr2 (117-190)||(19536434-19536507)
chr2 (118-191)||(23717976-23718048)
chr2 (118-191)||(24105648-24105720)
chr2 (115-151)||(896200-896236)
chr2 (35-82)||(19536361-19536408)
chr2 (35-82)||(19574031-19574078)
chr2 (116-175)||(28341289-28341348)
chr2 (84-142)||(1327976-1328033)
chr2 (36-82)||(18255945-18255991)
chr2 (36-82)||(34691770-34691816)
chr2 (36-82)||(34714182-34714228)
chr2 (67-165)||(36409614-36409711)
chr2 (90-175)||(18276486-18276570)
chr2 (128-189)||(21624217-21624278)
chr2 (35-71)||(42511322-42511358)
chr2 (67-140)||(44860320-44860394)
[»] scaffold0306 (1 HSPs)
scaffold0306 (115-191)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (35-190)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (115-191)||(21902-21978)
[»] chr1 (20 HSPs)
chr1 (115-167)||(6427323-6427375)
chr1 (115-175)||(40917716-40917776)
chr1 (115-174)||(398799-398858)
chr1 (35-88)||(48547938-48547991)
chr1 (115-167)||(2896155-2896207)
chr1 (36-182)||(10572535-10572690)
chr1 (116-191)||(5376535-5376609)
chr1 (115-159)||(12443494-12443538)
chr1 (115-151)||(17831565-17831601)
chr1 (115-151)||(36878450-36878486)
chr1 (76-168)||(1486703-1486796)
chr1 (75-175)||(38503285-38503386)
chr1 (122-177)||(48040503-48040558)
chr1 (90-168)||(1262856-1262933)
chr1 (115-165)||(9709795-9709845)
chr1 (115-165)||(34298411-34298461)
chr1 (136-190)||(39130822-39130876)
chr1 (115-175)||(10577769-10577829)
chr1 (115-151)||(19562655-19562691)
chr1 (130-190)||(34315663-34315722)
[»] chr3 (21 HSPs)
chr3 (116-175)||(4991002-4991061)
chr3 (115-190)||(8383207-8383282)
chr3 (78-177)||(5441029-5441128)
chr3 (65-154)||(8039818-8039908)
chr3 (116-175)||(24205076-24205135)
chr3 (128-190)||(8842280-8842342)
chr3 (94-159)||(5407261-5407325)
chr3 (115-175)||(28917966-28918026)
chr3 (122-181)||(10335327-10335386)
chr3 (67-190)||(25064859-25064981)
chr3 (115-190)||(55401025-55401100)
chr3 (33-71)||(4466538-4466576)
chr3 (33-63)||(5440965-5440995)
chr3 (115-189)||(8587055-8587129)
chr3 (116-166)||(9800014-9800064)
chr3 (33-71)||(13807237-13807275)
chr3 (115-189)||(32429414-32429488)
chr3 (115-167)||(2620087-2620139)
chr3 (115-175)||(15796328-15796388)
chr3 (115-167)||(26492239-26492291)
chr3 (35-71)||(27505334-27505370)
[»] scaffold0168 (3 HSPs)
scaffold0168 (35-181)||(21002-21149)
scaffold0168 (35-96)||(21217-21278)
scaffold0168 (35-96)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (115-175)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (116-175)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (67-175)||(241559-241668)
[»] chr4 (9 HSPs)
chr4 (115-196)||(7670625-7670709)
chr4 (115-175)||(23293020-23293080)
chr4 (116-151)||(35723420-35723455)
chr4 (117-151)||(17345451-17345485)
chr4 (115-149)||(40613441-40613475)
chr4 (116-173)||(847918-847975)
chr4 (115-168)||(36635296-36635349)
chr4 (35-79)||(18844423-18844467)
chr4 (35-71)||(28470448-28470484)
[»] scaffold0004 (1 HSPs)
scaffold0004 (116-157)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (65-150)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (115-187)||(178853-178925)
scaffold0018 (116-157)||(192284-192325)
[»] scaffold0450 (1 HSPs)
scaffold0450 (35-63)||(8564-8592)
[»] scaffold0027 (1 HSPs)
scaffold0027 (33-81)||(46731-46778)
[»] scaffold0021 (1 HSPs)
scaffold0021 (115-175)||(130447-130507)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 14 - 325
Target Start/End: Original strand, 38816628 - 38816932
Alignment:
Q  14 tatcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatag 113  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38816628 tatcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattatactgaaatatag 38816727  T
Q  114 cgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatggttaccgttcaattatt 213  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38816728 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc-------ggagtccgtattagtgcttcatagtatatggttaccgttcaattatt 38816820  T
Q  214 ctattttctcaaattattgcttcaattcaagcaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 313  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816821 ctattttctcaaattattgcttcaattcaaacaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 38816920  T
Q  314 gactctctgttg 325  Q
    ||||||||||||    
T  38816921 gactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||||||||| ||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 164
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaactatt 131  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | |||||||||||| ||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  132 agcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  123 caaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||| ||||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||||||||| ||||| | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  33 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 82  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    ||||||| ||| |||||||||||||||||||||||| |||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    ||||||||||| || ||||| ||||||||||||||| |||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 87  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | |||||||||||| |||||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  117 ttttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||| ||||| ||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  33 aactatgaagcacggacactcctcgaattag 63  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  118 tttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    ||||||||| ||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 17123073 - 17123037
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||||| |||||||||||| |||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 21522762 - 21522722
Alignment:
Q  128 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    ||||||| |||||||||||||||| |||||| |||||||||    
T  21522762 tattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 21533328 - 21533288
Alignment:
Q  128 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    ||||||| |||||||||||||||| |||||| |||||||||    
T  21533328 tattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 27144488 - 27144452
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||||||||| |||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||| ||||| ||||||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  65 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgt 147  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | |||||||||||| ||||||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    |||||||||||| | |||||||||||||||||||||| |||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||| ||||||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  165 ccggagtccgtat 177  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  84 acaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    |||||||||||||  ||||||||||| ||| | |||||||||||| ||||||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||| ||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaactatta 132  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| ||||| |||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  133 gcggtgtcggcgt 145  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||||||||| ||||| |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaac 127  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  |||||||||||     
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  128 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 195  Q
    ||||||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  119 ttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||||| |||||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 166  Q
    |||||||||||| ||||| ||||| ||||||||||||||| ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||| ||||| ||||||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||||| ||||| | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgt 157  Q
    |||||||||||| |||||| ||||| |||||||||||||||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  84 acaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||||||  |||||| |||| ||| || ||||||| ||| ||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgt 157  Q
    |||||||||||| |||||||||||||||||| ||||| |||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    |||||| ||||| |||||||||||||| ||||||||| |||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  72 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtg 146  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | |||||||||||| |||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 11072362 - 11072290
Alignment:
Q  75 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtc 148  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| ||||| ||||| |||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtc 11072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 63
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  34 actatgaagcacggacactcctcgaattag 63  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  117 ttttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 166  Q
    |||||||||| ||||||||||||||| |||||||  |||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  35 ctatgaagcacggacactcctcgaattag 63  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 20549816 - 20549780
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| ||||||| |||||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  165 ccgg 168  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||| ||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||| ||||| ||||||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||| ||||||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  165 ccggagtccgt 175  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||| || |||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 175
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaactattagc 134  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | |||||||||||| ||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  135 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  122 tcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||| ||||||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 188  Q
    ||||| ||||| ||||||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 8805524 - 8805656
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgac---accgacaccacaccgacacataattataatgaaatatagcgattttctcaaactatt 131  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||| | | || ||| | |||||||||||| ||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattat-gtgattttctcaaattatt 8805622  T
Q  132 agcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    ||| ||| || |||||| || || ||| ||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| ||||| ||||||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  165 ccggagtccgt 175  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 166  Q
    |||||||||||| |||| ||||||||||||||||| |||||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||||||||| |||||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||||||||| ||||| | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    |||||||| ||| |||||||||||||||||||||||| |||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 19040377 - 19040339
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtat 153  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  122 tcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||| ||||||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||| ||||| ||||||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    ||||||||||| |||||||||||||| ||||||||| |||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 82  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||| ||||| ||||||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtg 158  Q
    |||||||||||| |||||||||||||||||||||| | ||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  33 aactatgaagcacggacactcctcgaattag 63  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  72 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 169  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | |||||||||||| |||||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  170 gtccgt 175  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    |||||| ||||| ||||| | |||||||||||||||| |||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacac 76  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccg 156  Q
    |||||||||||| |||||||||||| ||||||||||| ||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 167  Q
    |||||| ||||| ||||||  |||||||||||||||| |||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||| ||||| ||||||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| ||||| ||||||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  165 ccgg 168  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| ||||| ||||||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  165 ccggagtcc 173  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  122 tcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||| ||||||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 181  Q
    |||||||||||| ||||||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    |||||||| ||| ||||||| ||||||||||||| ||||||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  122 tcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||| |||||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||| ||||| ||||||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtg 158  Q
    |||||||||||| ||||| |||||||||||||||||| ||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 177  Q
    |||| ||||||| ||||||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 39954313 - 39954346
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtc 148  Q
    |||||||||||| |||||||||||||||||||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 31236611 - 31236651
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatcc 155  Q
    |||||||||||| ||||||| ||||||||||||| ||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  82 ccacaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtg 158  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| | ||||||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  79 acaccacaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 178  Q
    |||| |||||| |||||||||| | |||| ||| | |||||||||||| ||||||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  179 cgtgcttcatag 190  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 33519798 - 33519736
Alignment:
Q  128 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519798 tattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||| ||||| ||||||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  84 acaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||||||||||| | |||| ||| | ||||||| |||| ||||| | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    |||||||||||| ||||||||||||||||||||| || |||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  117 ttttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||| ||||| ||||||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  118 tttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 191  Q
    ||||||||| ||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  118 tttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 191  Q
    ||||||||| ||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 896236 - 896200
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||||||||||||| ||||||||||||||||    
T  896236 gattttctcaaactattagcagtgtcggcgtgtcagt 896200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 82  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 19574078 - 19574031
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 82  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacac 19574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 28341348 - 28341289
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||||||||||| ||| ||| ||||||||| ||| ||||||| ||||| ||||||    
T  28341348 attttctcaaactattaccggcgtcagcgtgtcagcatcagtgccgtatccggtgtccgt 28341289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  84 acaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcgg 142  Q
    ||||||||||||||||||| |||| | ||  |||||||||||| |||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  36 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 82  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  36 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 82  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  36 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 82  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||| ||| |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  90 acacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||||| | |||| || || |||||||||||| |||||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 21624278 - 21624217
Alignment:
Q  128 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 189  Q
    ||||||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624278 tattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtcc 71  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtc 140  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| |||||||||||||| |||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 191  Q
    |||||||||||| ||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 190
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  35 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaacta 129  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||| ||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  130 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 191  Q
    |||||||||||| ||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 167  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 174  Q
    |||||| ||||| |||||||||||||||||||||||| |||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 88  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 167  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 182
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  36 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 125  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  126 actattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 182  Q
    | |||||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 191  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgc 159  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 17831565 - 17831601
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 36878486 - 36878450
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  76 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| ||||| ||||||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  75 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 172  Q
    |||||||  |||||||||||||  |||| | |||||||||  |||||||||||| ||||||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  173 cgt 175  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  122 tcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 177  Q
    ||||| ||||| | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  90 acacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    |||| |||||||| |||| ||| | |||||||||||| ||||||| ||||||||||||| || | |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    |||||||||||| |||||||||||| ||| ||||||| |||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtc 165  Q
    |||||||||||| |||||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 39130822 - 39130876
Alignment:
Q  136 gtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130822 gtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 10577769 - 10577829
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||||| |||  |||||| ||||||||||||| || |||||| ||||||||| ||||||    
T  10577769 gattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgt 10577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 19562655 - 19562691
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 34315722 - 34315663
Alignment:
Q  130 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    ||||| |||||||| |||||||||||||| |||||||  | ||||||| ||||||||||||    
T  34315722 ttagctgtgtcggcatgtcagtatccgtgtcgtgtccata-tccgtatccgtgcttcatag 34315663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||||||||| |||||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  78 gacaccacaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 176  Q
    ||||| ||||||||||||||||  | |||| ||| | |||||||||||| | ||||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  65 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatc 154  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   ||||||||||| |||||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||||| ||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 8842342 - 8842280
Alignment:
Q  128 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842342 tattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  94 ataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgc 159  Q
    ||||||| |||||| ||| | |||||||||||| | ||||||||||||||||||| ||||||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||| ||||| |||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  122 tcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 181  Q
    ||||| ||||||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 190
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  67 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 166  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||  ||||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  167 ggagtccgtattcgtgcttcatag 190  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 190  Q
    |||||| ||||| ||||||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  33 aactatgaagcacggacactcctcgaattagccatgtcc 71  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  33 aactatgaagcacggacactcctcgaattag 63  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 189  Q
    |||||| ||||| || |||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 166  Q
    ||||||||||| |||||| ||||||||||||||||| | |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  33 aactatgaagcacggacactcctcgaattagccatgtcc 71  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 189  Q
    |||||||| ||| |||||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 167  Q
    ||||||||||||  ||||| ||||||||||||||||| |||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||| ||||| ||||| | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 167  Q
    |||||| ||||| |||||||  ||||||||||||||| |||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtcc 71  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 181
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaactatta 132  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | ||||||||  |||||||||  ||  ||| | |||||||||||| |||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  133 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 181  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 96  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 96  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||| ||||| ||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    ||||||||||| ||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  67 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgt 164  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  |||| ||||||| |||||||||||||||| |||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  165 ccggagtccgt 175  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 7670709 - 7670625
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcg---tgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatg 196  Q
    ||||||||||||||||||||  ||||||||   ||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||    
T  7670709 gattttctcaaactattagcaatgtcggcgacgtgtcagtttccgcgtcgtgtccggtatccatattcgtgcttcatactatatg 7670625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||| ||||| ||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 151
Target Start/End: Original strand, 35723420 - 35723455
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 17345451 - 17345485
Alignment:
Q  117 ttttctcaaactattagcggtgtcggcgtgtcagt 151  Q
    |||||||||| ||||||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 40613475 - 40613441
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtca 149  Q
    |||||||||||| ||||||||||||||||||||||    
T  40613475 gattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 173  Q
    ||||||||||| |||||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 168  Q
    |||||||||||| |||||| ||||| ||||||||||| |||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 79  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  35 ctatgaagcacggacactcctcgaattagccatgtcc 71  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgt 157  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  65 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaactattagcggtgtcggcgtgtcag 150  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | |||||||||||| |||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 187  Q
    |||||| ||||| ||||||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  116 attttctcaaactattagcggtgtcggcgtgtcagtatccgt 157  Q
    ||||||||||| ||||| |||||||||||||||||| |||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  35 ctatgaagcacggacactcctcgaattag 63  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  33 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 81  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 130507 - 130447
Alignment:
Q  115 gattttctcaaactattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 175  Q
    |||||| ||||||||||| | |||||||| ||||| | |||||| ||||||||| ||||||    
T  130507 gattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgt 130447  T

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