View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12210_low_4 (Length: 409)

Name: NF12210_low_4
Description: NF12210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12210_low_4
NF12210_low_4
[»] chr4 (26 HSPs)
chr4 (1-298)||(44692466-44692763)
chr4 (296-387)||(56030187-56030278)
chr4 (298-387)||(22135130-22135219)
chr4 (298-387)||(5100743-5100832)
chr4 (298-387)||(22132898-22132987)
chr4 (297-380)||(24347958-24348041)
chr4 (296-387)||(44600339-44600430)
chr4 (296-387)||(47211219-47211310)
chr4 (298-387)||(14787932-14788021)
chr4 (297-387)||(17662737-17662827)
chr4 (297-375)||(38890624-38890702)
chr4 (314-387)||(30136331-30136404)
chr4 (300-387)||(19322410-19322498)
chr4 (298-369)||(14789500-14789571)
chr4 (297-387)||(9022059-9022149)
chr4 (310-381)||(38209186-38209257)
chr4 (207-291)||(44636412-44636496)
chr4 (314-376)||(5516771-5516833)
chr4 (298-385)||(10112626-10112709)
chr4 (298-387)||(9863499-9863588)
chr4 (154-252)||(44654120-44654217)
chr4 (312-381)||(29609914-29609983)
chr4 (330-381)||(10979611-10979662)
chr4 (5-52)||(44636542-44636589)
chr4 (332-379)||(54929198-54929245)
chr4 (219-275)||(44682965-44683021)
[»] chr8 (12 HSPs)
chr8 (297-387)||(3873749-3873839)
chr8 (298-387)||(3265663-3265752)
chr8 (298-387)||(32339094-32339183)
chr8 (298-387)||(43529871-43529960)
chr8 (298-387)||(608470-608559)
chr8 (298-387)||(28283724-28283813)
chr8 (295-387)||(15808959-15809051)
chr8 (298-387)||(41384493-41384582)
chr8 (299-387)||(41382420-41382508)
chr8 (310-379)||(13986304-13986372)
chr8 (310-379)||(30679186-30679254)
chr8 (350-379)||(27820149-27820178)
[»] chr7 (37 HSPs)
chr7 (297-387)||(37412627-37412717)
chr7 (298-387)||(443326-443415)
chr7 (298-387)||(3035415-3035504)
chr7 (298-387)||(7094926-7095015)
chr7 (298-387)||(7472485-7472574)
chr7 (298-387)||(11756925-11757014)
chr7 (297-387)||(3676996-3677086)
chr7 (298-384)||(7092682-7092768)
chr7 (297-387)||(20625733-20625823)
chr7 (297-387)||(20629624-20629714)
chr7 (297-387)||(20642043-20642133)
chr7 (298-387)||(18345237-18345326)
chr7 (298-387)||(20299155-20299244)
chr7 (298-387)||(28487249-28487338)
chr7 (298-387)||(38395986-38396075)
chr7 (298-387)||(47865328-47865417)
chr7 (296-387)||(7352157-7352248)
chr7 (298-387)||(1849665-1849754)
chr7 (298-387)||(7349778-7349867)
chr7 (298-387)||(7470532-7470621)
chr7 (298-387)||(21470794-21470883)
chr7 (298-387)||(31156411-31156500)
chr7 (298-388)||(38393683-38393773)
chr7 (298-387)||(1606171-1606260)
chr7 (298-387)||(28485261-28485350)
chr7 (296-374)||(21989851-21989929)
chr7 (310-387)||(24258170-24258247)
chr7 (298-387)||(42331504-42331593)
chr7 (296-387)||(40281901-40281994)
chr7 (310-381)||(10690686-10690756)
chr7 (310-361)||(20297110-20297161)
chr7 (315-381)||(12310542-12310608)
chr7 (311-352)||(43254023-43254064)
chr7 (344-376)||(6628852-6628884)
chr7 (335-375)||(12485044-12485084)
chr7 (335-375)||(12506475-12506515)
chr7 (344-376)||(12657667-12657699)
[»] scaffold1674 (1 HSPs)
scaffold1674 (298-387)||(6-95)
[»] chr5 (20 HSPs)
chr5 (298-387)||(25803707-25803796)
chr5 (298-387)||(27912219-27912308)
chr5 (298-387)||(18468698-18468787)
chr5 (298-387)||(26098752-26098841)
chr5 (298-387)||(27910135-27910224)
chr5 (295-387)||(21288526-21288618)
chr5 (296-387)||(18596324-18596415)
chr5 (298-384)||(15551925-15552011)
chr5 (298-387)||(3373541-3373630)
chr5 (298-387)||(26097421-26097510)
chr5 (300-387)||(18511713-18511800)
chr5 (301-387)||(18509818-18509904)
chr5 (305-387)||(17415811-17415893)
chr5 (297-387)||(6661944-6662034)
chr5 (318-387)||(10586549-10586618)
chr5 (298-377)||(40221282-40221361)
chr5 (314-381)||(5779144-5779211)
chr5 (298-352)||(18466411-18466465)
chr5 (297-352)||(15143219-15143274)
chr5 (344-379)||(2532750-2532785)
[»] chr3 (20 HSPs)
chr3 (298-387)||(746422-746511)
chr3 (298-387)||(41848804-41848893)
chr3 (295-387)||(455570-455662)
chr3 (298-387)||(457950-458039)
chr3 (298-387)||(25533107-25533196)
chr3 (298-387)||(51943042-51943131)
chr3 (298-387)||(53915993-53916082)
chr3 (297-387)||(1313081-1313171)
chr3 (298-384)||(10622041-10622127)
chr3 (298-387)||(42991953-42992042)
chr3 (296-384)||(53918164-53918252)
chr3 (294-387)||(4104394-4104487)
chr3 (300-385)||(42989954-42990039)
chr3 (298-387)||(27636123-27636212)
chr3 (298-372)||(6561613-6561687)
chr3 (310-381)||(53974124-53974195)
chr3 (310-381)||(11072646-11072717)
chr3 (330-381)||(54287576-54287627)
chr3 (310-381)||(11066257-11066329)
chr3 (297-338)||(27000082-27000123)
[»] chr2 (14 HSPs)
chr2 (298-387)||(42924005-42924094)
chr2 (297-387)||(35218476-35218566)
chr2 (298-387)||(23452740-23452829)
chr2 (298-387)||(35216095-35216184)
chr2 (296-387)||(42452447-42452538)
chr2 (296-387)||(27136416-27136507)
chr2 (298-384)||(27583821-27583907)
chr2 (305-387)||(34575614-34575696)
chr2 (310-387)||(28568661-28568738)
chr2 (310-373)||(28568348-28568411)
chr2 (310-381)||(41303549-41303621)
chr2 (314-381)||(15693589-15693655)
chr2 (335-376)||(39286911-39286952)
chr2 (311-362)||(7502582-7502633)
[»] chr1 (27 HSPs)
chr1 (298-387)||(9459924-9460013)
chr1 (298-387)||(9463751-9463840)
chr1 (298-387)||(39931762-39931851)
chr1 (298-387)||(46432547-46432636)
chr1 (298-387)||(47905956-47906045)
chr1 (298-387)||(48664852-48664941)
chr1 (297-387)||(24325346-24325436)
chr1 (298-387)||(31736026-31736115)
chr1 (296-387)||(15295350-15295441)
chr1 (298-384)||(4131796-4131882)
chr1 (297-387)||(17325138-17325228)
chr1 (297-387)||(28998755-28998845)
chr1 (297-387)||(29004471-29004561)
chr1 (298-387)||(27339641-27339730)
chr1 (297-387)||(2949726-2949816)
chr1 (298-387)||(6115628-6115718)
chr1 (298-387)||(6997214-6997303)
chr1 (298-387)||(27337443-27337532)
chr1 (298-387)||(45693935-45694024)
chr1 (298-387)||(16561131-16561220)
chr1 (327-387)||(21948694-21948754)
chr1 (310-379)||(13785764-13785833)
chr1 (310-379)||(32260748-32260817)
chr1 (336-387)||(6996067-6996118)
chr1 (335-381)||(10115509-10115555)
chr1 (329-376)||(16855265-16855312)
chr1 (310-381)||(11693680-11693751)
[»] scaffold0468 (1 HSPs)
scaffold0468 (299-387)||(2096-2184)
[»] chr6 (14 HSPs)
chr6 (295-387)||(30035107-30035199)
chr6 (298-387)||(5275839-5275928)
chr6 (297-387)||(26933069-26933159)
chr6 (298-387)||(2629390-2629479)
chr6 (298-387)||(12196015-12196104)
chr6 (298-387)||(30966923-30967012)
chr6 (300-387)||(20526548-20526635)
chr6 (297-387)||(18317750-18317840)
chr6 (297-387)||(19705076-19705166)
chr6 (298-387)||(22858447-22858536)
chr6 (320-381)||(30445243-30445304)
chr6 (296-387)||(17852265-17852355)
chr6 (310-381)||(30443024-30443097)
chr6 (300-371)||(17011781-17011851)
[»] scaffold0154 (1 HSPs)
scaffold0154 (297-387)||(11972-12062)
[»] scaffold0005 (2 HSPs)
scaffold0005 (298-387)||(51709-51798)
scaffold0005 (298-369)||(50159-50230)
[»] scaffold0511 (1 HSPs)
scaffold0511 (297-387)||(1734-1824)
[»] scaffold0133 (1 HSPs)
scaffold0133 (298-387)||(4546-4635)
[»] scaffold0031 (1 HSPs)
scaffold0031 (298-387)||(78883-78972)
[»] scaffold0533 (1 HSPs)
scaffold0533 (335-376)||(2232-2273)


Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 44692466 - 44692763
Alignment:
Q  1 agacggctatgaatgaaatcaatgctggtaagttattttaaaaccatgagatatatgtccccacaacatt----gctattatatttatatgagttaaact 96  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||    |||||||||||||     ||||||||||||||||||||||||||    
T  44692466 agacggccatgaatgaaatcaatgctggtaagtttttttaaaaccatgagat----gtccccacaacatatatagctattatatttatatgagttaaact 44692561  T
Q  97 tggtatgctcagtttctgttcataatttacattaattattctccaaaagaggtcaataagtgtttaagaaagcctacctttttccttacggtacgtctta 196  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44692562 tggtatgctcagtttctgttcataatttacatgaattattctccaaaagaggtcaataagtgtttaagaaagcctacctttttccttacggtacgtctta 44692661  T
Q  197 catgtatcgaaaaactatgtagggatgcttgtaatatacaagctcttgttattaagcatctgatcctaagtctaattttgttgcaaaatttattttggaa 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44692662 catgtatcgaaaaactatgtagggatgcttgtaatatacaagctcttgttattaagcatctgatcctaagtctaattttgttgcaaaatttattttggaa 44692761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 296 - 387
Target Start/End: Original strand, 56030187 - 56030278
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  56030187 attgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 56030278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 22135219 - 22135130
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22135219 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 22135130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 5100743 - 5100832
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  5100743 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaat 5100832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 22132987 - 22132898
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22132987 tgttgtagtatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 22132898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 380
Target Start/End: Original strand, 24347958 - 24348041
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgc 380  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24347958 ttgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgc 24348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 44600430 - 44600339
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  44600430 attgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 44600339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 47211310 - 47211219
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  47211310 attgttgtagtatgacttaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctcaaaat 47211219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 14788021 - 14787932
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  14788021 tgttgtagtatgactcaaaatttgatggatggagaataatgttgctaaaaatataaaagatttgtttcaaatatattttgtggtgaaaat 14787932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 17662827 - 17662737
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||  ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  17662827 ttgttgtagtatgactacaaatttgatggatggagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaat 17662737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 297 - 375
Target Start/End: Complemental strand, 38890702 - 38890624
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattt 375  Q
    ||||||||| || |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38890702 ttgttgtagcatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattt 38890624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 30136331 - 30136404
Alignment:
Q  314 aaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  30136331 aaaatttgatgaatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 30136404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 387
Target Start/End: Original strand, 19322410 - 19322498
Alignment:
Q  300 ttgtagtatcactcaaaatttgatggttggagaatattgtt-gctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||| |||||||||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||||||||| | ||||||||    
T  19322410 ttgtagtatgactcaaaatttgatggatggagaatattttttgctaaaaatataaaagatttgttttaaatatattttatactgaaaat 19322498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 14789571 - 14789500
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaat 369  Q
    ||||||||||| |||||||||||||||| || |||||| ||||||| |||||||||||||||||||||||||    
T  14789571 tgttgtagtatgactcaaaatttgatggatgaagaataatgttgctaaaaatataaaagatttgtttcaaat 14789500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 9022059 - 9022149
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| | ||||||||| |||| ||   |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||    
T  9022059 ttgttgtagtatgattcaaaattttatggatgagaaatattgttgttgaaaatataaatgatttgtttcaaatatattttttgctgaaaat 9022149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 38209257 - 38209186
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||||||||||||| || | |||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  38209257 actcaaaatttgatggatgaaaaatattgttgttaaaaatataaaagatttgttttaaatatattttgtgct 38209186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 44636496 - 44636412
Alignment:
Q  207 aaaactatgtagggatgcttgtaatatacaagctcttgttattaagcatctgatcctaagtctaattttgttgcaaaatttattt 291  Q
    |||||||||  ||||| ||||||||||||||| |||  |||||||| || ||||||||| |||||||||||||||||| ||||||    
T  44636496 aaaactatgcggggatacttgtaatatacaagttctaattattaagtatttgatcctaaatctaattttgttgcaaaaattattt 44636412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 376
Target Start/End: Complemental strand, 5516833 - 5516771
Alignment:
Q  314 aaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatatttt 376  Q
    |||||||||||  ||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  5516833 aaaatttgatgaatggagaatattgttgctaaaaatataaatgaattgtttcaaatatatttt 5516771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 385
Target Start/End: Original strand, 10112626 - 10112709
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaa 385  Q
    ||||||||||| ||| |||||||| ||  || |||||||||||||| ||||||||||||    |||||||||||||||||||||||||    
T  10112626 tgttgtagtatgacttaaaatttgttgaatgaagaatattgttgctaaaaatataaaag----gtttcaaatatattttgtgctgaaa 10112709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 9863499 - 9863588
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||| ||| |||||||||||| ||| || |  |||||||| || |||||||||| ||||||||||||| |||||||||||| |||||    
T  9863499 tgttgtaatatgactcaaaatttgttggatgaaatatattgttactaaaaatataaatgatttgtttcaaacatattttgtgctaaaaat 9863588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 44654120 - 44654217
Alignment:
Q  154 aagtgtttaagaaagcctacctttttccttacggtacgtcttacatgtatcgaaaaactatgtagggatgcttgtaatatacaagctcttgttattaag 252  Q
    |||||||| |||| ||||||| ||||||| ||||| |||| | ||||||| ||||| |||||   |||||||| |||||||||||||||| ||||||||    
T  44654120 aagtgtttgagaatgcctacccttttcctcacggttcgtcatgcatgtattgaaaa-ctatgagaggatgcttttaatatacaagctcttattattaag 44654217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 381
Target Start/End: Complemental strand, 29609983 - 29609914
Alignment:
Q  312 tcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||||||||||| || |||||||||||||| ||| |||    ||||| ||||||||||||||||||||    
T  29609983 tcaaaatttgatggatgaagaatattgttgctaaaagtattcttgatttttttcaaatatattttgtgct 29609914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 381
Target Start/End: Original strand, 10979611 - 10979662
Alignment:
Q  330 agaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||| ||||||  ||||||||||||||||||  |||||||||||||||||||    
T  10979611 agaagattgttaatgaaaatataaaagatttacttcaaatatattttgtgct 10979662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 44636589 - 44636542
Alignment:
Q  5 ggctatgaatgaaatcaatgctggtaagttattttaaaaccatgagat 52  Q
    ||||||||||||||||||||| |||| ||| |||||| ||||||||||    
T  44636589 ggctatgaatgaaatcaatgccggtatgtttttttaagaccatgagat 44636542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 54929245 - 54929198
Alignment:
Q  332 aatattgttgctgaaaatataaaagatttgtttcaaatatattttgtg 379  Q
    |||||||||||| ||||||||||||||||| || |||| |||||||||    
T  54929245 aatattgttgctaaaaatataaaagatttgatttaaatgtattttgtg 54929198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 44682965 - 44683021
Alignment:
Q  219 ggatgcttgtaatatacaagctcttgttattaagcatctgatcctaagtctaatttt 275  Q
    |||||||| |||||||||||||||| |||||||| || ||||| ||| |||| ||||    
T  44682965 ggatgcttttaatatacaagctcttattattaagtatttgatcgtaaatctattttt 44683021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 8e-37; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 3873749 - 3873839
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3873749 ttgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 3873839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 3265752 - 3265663
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3265752 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 3265663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 32339094 - 32339183
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32339094 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 32339183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 43529871 - 43529960
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43529871 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 43529960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 608470 - 608559
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  608470 tgttgtagtatcactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 608559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 28283813 - 28283724
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28283813 tgttgtagtatgactcaaaatttgatggatggagaatatttttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 28283724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 15808959 - 15809051
Alignment:
Q  295 aattgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  15808959 aattgttttagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaat 15809051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 41384493 - 41384582
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||    
T  41384493 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcgaatatattttatactgaaaat 41384582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 41382420 - 41382508
Alignment:
Q  299 gttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||| | ||||||||    
T  41382420 gttgtagtatgactcaaaatttgatggatggagaatattgttgttaaaaatataaaagatttgtttcgaatatattttatactgaaaat 41382508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 379
Target Start/End: Complemental strand, 13986372 - 13986304
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtg 379  Q
    ||||||||||| |||| || |||| ||||||||| ||||||| |||||||||||| ||||||||||||||    
T  13986372 actcaaaattttatggatgaagaagattgttgctaaaaatat-aaagatttgttttaaatatattttgtg 13986304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 379
Target Start/End: Complemental strand, 30679254 - 30679186
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtg 379  Q
    |||||||||||||||| || ||||||| |||| | |||||| ||||||||||||| | ||||||||||||    
T  30679254 actcaaaatttgatggatgaagaatat-gttggtaaaaataaaaaagatttgttttagatatattttgtg 30679186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Complemental strand, 27820178 - 27820149
Alignment:
Q  350 ataaaagatttgtttcaaatatattttgtg 379  Q
    ||||||||||||||||||||||||||||||    
T  27820178 ataaaagatttgtttcaaatatattttgtg 27820149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 8e-37; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 37412717 - 37412627
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37412717 ttgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 37412627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 443326 - 443415
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  443326 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 443415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 3035415 - 3035504
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3035415 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 3035504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 7095015 - 7094926
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7095015 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 7094926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 7472574 - 7472485
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7472574 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 7472485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 11756925 - 11757014
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11756925 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 11757014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 3676996 - 3677086
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3676996 ttgttgtagtatgactcaaaatttgatagatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 3677086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 298 - 384
Target Start/End: Complemental strand, 7092768 - 7092682
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaa 384  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7092768 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaa 7092682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 20625733 - 20625823
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20625733 ttgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 20625823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 20629624 - 20629714
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20629624 ttgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 20629714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 20642043 - 20642133
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20642043 ttgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 20642133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 18345237 - 18345326
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  18345237 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaat 18345326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 20299155 - 20299244
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  20299155 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaat 20299244  T

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Target: chr7; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 28487249 - 28487338
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  28487249 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgcttcaaatatattttgtgctgaaaat 28487338  T

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Target: chr7; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 38395986 - 38396075
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38395986 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 38396075  T

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Target: chr7; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 47865328 - 47865417
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47865328 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 47865417  T

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Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 7352248 - 7352157
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  7352248 attgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 7352157  T

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Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 1849665 - 1849754
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| ||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1849665 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 1849754  T

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Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 7349867 - 7349778
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  7349867 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 7349778  T

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Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 7470621 - 7470532
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7470621 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaacatttgtttcaaatatattttgtgctgaaaat 7470532  T

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Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 21470883 - 21470794
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||| | |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21470883 tgttgtagtttgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 21470794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 31156500 - 31156411
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  31156500 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 31156411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 388
Target Start/End: Original strand, 38393683 - 38393773
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaatt 388  Q
    ||||||||||| | || ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  38393683 tgttgtagtatgattctaaatttgatggatggagaatattgttgctaaaaatatataagatttgtttcaaatatattttgtgctgaaaatt 38393773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 1606171 - 1606260
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| ||||||||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  1606171 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 1606260  T

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Target: chr7; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 28485261 - 28485350
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| | |||||||||||||| || |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  28485261 tgttgtagtatgattcaaaatttgatggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgctgaaaat 28485350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 21989851 - 21989929
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatatt 374  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21989851 attgttgtagtatgacccaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatt 21989929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 387
Target Start/End: Original strand, 24258170 - 24258247
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24258170 actcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 24258247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 42331593 - 42331504
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| ||| |||||||||||  || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  42331593 tgttgtagtatgacttaaaatttgatgaatgaagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaat 42331504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 40281994 - 40281901
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaata--ttgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||| |||||||| |||||||||||||||| || |||| |  |||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  40281994 attggtgtagtatgactcaaaatttgatggatgaagaagaatttgttgctaaaaatataaaatatttgtttcaaatatattttgtgttgaaaat 40281901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 10690686 - 10690756
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    ||||||||||||||||  |||||| ||||||||| |||||||||||| | ||||||||||||||||||||||    
T  10690686 actcaaaatttgatggagggagaagattgttgctaaaaatataaaag-tatgtttcaaatatattttgtgct 10690756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 20297110 - 20297161
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttg 361  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  20297110 actcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttg 20297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 12310608 - 12310542
Alignment:
Q  315 aaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||| |||| || |||| |||||||||    ||||||||||||||||||||||||||||||||||    
T  12310608 aaatttaatggatgaagaagattgttgctactgatataaaagatttgtttcaaatatattttgtgct 12310542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 352
Target Start/End: Complemental strand, 43254064 - 43254023
Alignment:
Q  311 ctcaaaatttgatggttggagaatattgttgctgaaaatata 352  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  43254064 ctcaaaatttgatggatggagaatattgttgctaaaaatata 43254023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 376
Target Start/End: Original strand, 6628852 - 6628884
Alignment:
Q  344 gaaaatataaaagatttgtttcaaatatatttt 376  Q
    |||||||||||||||||||||||||||||||||    
T  6628852 gaaaatataaaagatttgtttcaaatatatttt 6628884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 12485084 - 12485044
Alignment:
Q  335 attgttgctgaaaatataaaagatttgtttcaaatatattt 375  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  12485084 attgttgtagaaaatataaaagatttgtttcaaatatattt 12485044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 12506515 - 12506475
Alignment:
Q  335 attgttgctgaaaatataaaagatttgtttcaaatatattt 375  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  12506515 attgttgtagaaaatataaaagatttgtttcaaatatattt 12506475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 376
Target Start/End: Complemental strand, 12657699 - 12657667
Alignment:
Q  344 gaaaatataaaagatttgtttcaaatatatttt 376  Q
    |||||||||||||||||||||||||||||||||    
T  12657699 gaaaatataaaagatttgtttcaaatatatttt 12657667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 95 - 6
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  95 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 25803707 - 25803796
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25803707 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 25803796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 27912219 - 27912308
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27912219 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 27912308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 18468698 - 18468787
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18468698 tgttgtagtatgactcaaaatttgatggatggagaatatttttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 18468787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 26098841 - 26098752
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26098841 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 26098752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 27910135 - 27910224
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27910135 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 27910224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 21288526 - 21288618
Alignment:
Q  295 aattgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  21288526 aattgttgtagtataactcaaaatttgatggatggagaatattgttgctaaaaataaaaaagatttgtttaaaatatattttgtgctgaaaat 21288618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 296 - 387
Target Start/End: Original strand, 18596324 - 18596415
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  18596324 attgttgtactatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaat 18596415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 384
Target Start/End: Original strand, 15551925 - 15552011
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaa 384  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  15551925 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaa 15552011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 3373630 - 3373541
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  3373630 tgttgtagtatgactcagaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 3373541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 26097421 - 26097510
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  26097421 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttgtactgaaaat 26097510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 300 - 387
Target Start/End: Complemental strand, 18511800 - 18511713
Alignment:
Q  300 ttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||| |||||||||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  18511800 ttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcgaatatattttgtgctgaaaat 18511713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 301 - 387
Target Start/End: Complemental strand, 18509904 - 18509818
Alignment:
Q  301 tgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  18509904 tgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcgaatatattttgtgctgaaaat 18509818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 17415893 - 17415811
Alignment:
Q  305 gtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  17415893 gtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttttgctgaaaat 17415811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 6662034 - 6661944
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| ||| |||| ||||||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  6662034 ttgttgtagtatgacttaaaacttgatggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgttgaaaat 6661944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 387
Target Start/End: Original strand, 10586549 - 10586618
Alignment:
Q  318 tttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10586549 tttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 10586618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 377
Target Start/End: Original strand, 40221282 - 40221361
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttg 377  Q
    ||||||||||| ||||||||||| || | || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  40221282 tgttgtagtatgactcaaaatttaattgatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg 40221361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 5779211 - 5779144
Alignment:
Q  314 aaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||||||| | || |||| ||| ||||| |||||||||||||||||||||||||||||||||||||    
T  5779211 aaaatttgatagatgaagaagattattgctaaaaatataaaagatttgtttcaaatatattttgtgct 5779144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 18466411 - 18466465
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatata 352  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  18466411 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 18466465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 15143219 - 15143274
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatata 352  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  15143219 ttgttatagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 15143274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 379
Target Start/End: Complemental strand, 2532785 - 2532750
Alignment:
Q  344 gaaaatataaaagatttgtttcaaatatattttgtg 379  Q
    |||||||||||||||||||||||||||||| |||||    
T  2532785 gaaaatataaaagatttgtttcaaatatatcttgtg 2532750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 746422 - 746511
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  746422 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 746511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 41848804 - 41848893
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41848804 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 41848893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 455570 - 455662
Alignment:
Q  295 aattgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  455570 aattgttgtagtatgactcaaaatttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 455662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 457950 - 458039
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  457950 tgttgtagtatgactcaaaatttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 458039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 25533107 - 25533196
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  25533107 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttttgctgaaaat 25533196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 51943042 - 51943131
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51943042 tgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 51943131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 53916082 - 53915993
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  53916082 tgttgtagtatgactcaaaatttgagggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 53915993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 1313081 - 1313171
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||    
T  1313081 ttgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaatgatttgtttcaaatatattttgtgttgaaaat 1313171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 384
Target Start/End: Complemental strand, 10622127 - 10622041
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaa 384  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  10622127 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaa 10622041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 42991953 - 42992042
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  42991953 tgttgtagtatgactcaaaatttgatggatggagaatattgttgttaaaaatataaaaggtttgtttcaaatatattttgtgctgaaaat 42992042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 296 - 384
Target Start/End: Complemental strand, 53918252 - 53918164
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaa 384  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  53918252 attgttatagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaa 53918164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 4104487 - 4104394
Alignment:
Q  294 gaattgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||||| ||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  4104487 gaattgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatactttatgctgaaaat 4104394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 300 - 385
Target Start/End: Original strand, 42989954 - 42990039
Alignment:
Q  300 ttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaa 385  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  42989954 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttttgctgaaa 42990039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 27636212 - 27636123
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| | | |||||||||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  27636212 tgttgtagtatgatttaaaatttgatggatggagaatattgttgctaaaaatataaaatattagtttcaaatatattttgtgctgaaaat 27636123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 372
Target Start/End: Original strand, 6561613 - 6561687
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatata 372  Q
    ||||||||||| |||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  6561613 tgttgtagtatgactcgaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatata 6561687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 53974195 - 53974124
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||||||||||||| || ||||| |||||| | ||||||||||||||||||||||| |||||||||||||    
T  53974195 actcaaaatttgatggatgaagaatgttgttgttaaaaatataaaagatttgtttcaattatattttgtgct 53974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 11072646 - 11072717
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||||||||||||| || |||| ||||||||  |||||||||| |||||||||||||||||| |||||||    
T  11072646 actcaaaatttgatggatgaagaagattgttgcaaaaaatataaatgatttgtttcaaatatatcttgtgct 11072717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 381
Target Start/End: Complemental strand, 54287627 - 54287576
Alignment:
Q  330 agaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  54287627 agaagattgttgctaaaaatataaaagatttgtttcaaatatatttcgtgct 54287576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 11066257 - 11066329
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaat-ataaaagatttgtttcaaatatattttgtgct 381  Q
    ||||| |||||||||| || |||||||||||||| ||||  ||||| |||||||||||||||||| |||||||    
T  11066257 actcataatttgatggatgaagaatattgttgctaaaaaagataaatgatttgtttcaaatatatcttgtgct 11066329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 27000082 - 27000123
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattg 338  Q
    |||||||||||| ||| |||||||||||| ||||||||||||    
T  27000082 ttgttgtagtatgactgaaaatttgatggatggagaatattg 27000123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 42924094 - 42924005
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42924094 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 42924005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 35218566 - 35218476
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35218566 ttgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 35218476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 23452829 - 23452740
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  23452829 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttatgctgaaaat 23452740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 35216184 - 35216095
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35216184 tgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 35216095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 296 - 387
Target Start/End: Original strand, 42452447 - 42452538
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||| ||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42452447 attgttgtagtatgacttaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 42452538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 27136507 - 27136416
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||| |||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  27136507 attgttgtagtatgactcaaaatttgatggatgaagaatattggtgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaat 27136416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 384
Target Start/End: Complemental strand, 27583907 - 27583821
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaa 384  Q
    ||||||||||| ||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27583907 tgttgtagtatgactcaaattttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaa 27583821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 34575696 - 34575614
Alignment:
Q  305 gtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  34575696 gtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgttctaaatatattttgtgctgaaaat 34575614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 28568738 - 28568661
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||||| | || |||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||    
T  28568738 actcaaaatttgatagatgaagaatattgttgctaaaactataaaagatttgtttcaaatatattttgttttgaaaat 28568661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 28568348 - 28568411
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatat 373  Q
    |||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||    
T  28568348 actcaaaatttgatggatgaagaatattgttgttaaaaatataaaagatttgtttcaaatatat 28568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 41303621 - 41303549
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaa-tataaaagatttgtttcaaatatattttgtgct 381  Q
    ||||| |||||||||| || |||| ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  41303621 actcagaatttgatggatgaagaagattgttgctaaaaaatataaaagatttgtttcaaatatattttgtgct 41303549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 15693589 - 15693655
Alignment:
Q  314 aaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||||||||| || | |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  15693589 aaaatttgatggatgaataatattgttgctaaaaatataaa-gatttgtttcaaatatattttgtgct 15693655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 39286911 - 39286952
Alignment:
Q  335 attgttgctgaaaatataaaagatttgtttcaaatatatttt 376  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  39286911 attgttgctaaaaatataaatgatttgtttcaaatatatttt 39286952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 7502582 - 7502633
Alignment:
Q  311 ctcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgt 362  Q
    ||||||||||||||| || |||| ||||||||| ||| ||||||||||||||    
T  7502582 ctcaaaatttgatggatgaagaagattgttgctcaaagtataaaagatttgt 7502633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 9460013 - 9459924
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9460013 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 9459924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 9463840 - 9463751
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9463840 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 9463751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 39931762 - 39931851
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39931762 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 39931851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 46432636 - 46432547
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46432636 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 46432547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 47905956 - 47906045
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47905956 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 47906045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 48664852 - 48664941
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48664852 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 48664941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 24325346 - 24325436
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  24325346 ttgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 24325436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 31736115 - 31736026
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31736115 tgttgtagtatgactcaaaatttgatggaaggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 31736026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 15295441 - 15295350
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||| ||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15295441 attgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 15295350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 384
Target Start/End: Complemental strand, 4131882 - 4131796
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaa 384  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  4131882 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaa 4131796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 17325228 - 17325138
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  17325228 ttgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgagttgaaaat 17325138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 28998845 - 28998755
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  28998845 ttgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaactataaaagatttgtttaaaatatattttgtgctgaaaat 28998755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 29004561 - 29004471
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  29004561 ttgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaactataaaagatttgtttaaaatatattttgtgctgaaaat 29004471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 27339730 - 27339641
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27339730 tgttgtagtatgactccaaatttgacggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 27339641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 2949816 - 2949726
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||| |||||| ||||||||||| |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2949816 ttgttatagtatgactcaaaatttcatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 2949726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 6115718 - 6115628
Alignment:
Q  298 tgttgtagtatcactcaaaa-tttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||| || |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6115718 tgttgtaggatgactcaaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 6115628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 6997214 - 6997303
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||| |||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  6997214 tgttatagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaat 6997303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 27337532 - 27337443
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||| ||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  27337532 tgttgtagtatgactccaaatttgatggatggggaatattgttgctaaaaatatataagatttgtttcaaatatattttgtgctgaaaat 27337443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 45694024 - 45693935
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||| ||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  45694024 tgttgtactatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaat 45693935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 16561131 - 16561220
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||| |||| | |||||||||| ||| || |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  16561131 tgttgttgtatgattcaaaatttgttggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgctgaaaat 16561220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 21948754 - 21948694
Alignment:
Q  327 tggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21948754 tggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 21948694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 379
Target Start/End: Complemental strand, 13785833 - 13785764
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtg 379  Q
    |||||||| ||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  13785833 actcaaaaattgatggatggagaatattgtcgctaaaaatatgaaagatttgtttcaaatatattttgtg 13785764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 379
Target Start/End: Original strand, 32260748 - 32260817
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtg 379  Q
    |||||||||||||||| || |||| ||||||||| ||||||||||||| |||||| ||||||||||||||    
T  32260748 actcaaaatttgatggatgaagaagattgttgctaaaaatataaaagaattgtttaaaatatattttgtg 32260817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 6996067 - 6996118
Alignment:
Q  336 ttgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  6996067 ttgttgctaaaaatataaaagacttgtttcaaatatattttgtgctgaaaat 6996118  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 381
Target Start/End: Original strand, 10115509 - 10115555
Alignment:
Q  335 attgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||    
T  10115509 attgttgttaaaaatataaaagatttgtttcaaatatattttgtgct 10115555  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 16855312 - 16855265
Alignment:
Q  329 gagaatattgttgctgaaaatataaaagatttgtttcaaatatatttt 376  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  16855312 gagaagattgatgcagaaaatataaaagatttgtttcaaatatatttt 16855265  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 11693751 - 11693680
Alignment:
Q  310 actcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||||||||||||| || |||| ||| ||||| ||| |||||||  ||||||| |||||||||| |||||    
T  11693751 actcaaaatttgatggatgaagaagattattgctaaaattataaaaattttgttttaaatatatttcgtgct 11693680  T

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Target: scaffold0468 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 2184 - 2096
Alignment:
Q  299 gttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2184 gttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 2096  T

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Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 295 - 387
Target Start/End: Complemental strand, 30035199 - 30035107
Alignment:
Q  295 aattgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  30035199 aattgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaat 30035107  T

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Target: chr6; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 5275928 - 5275839
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  5275928 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaat 5275839  T

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Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 26933159 - 26933069
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  26933159 ttgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 26933069  T

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Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 2629479 - 2629390
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| ||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2629479 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 2629390  T

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Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 12196104 - 12196015
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  12196104 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaat 12196015  T

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Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 30966923 - 30967012
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  30966923 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaat 30967012  T

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Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 300 - 387
Target Start/End: Original strand, 20526548 - 20526635
Alignment:
Q  300 ttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  20526548 ttgtagtatgactcaaaatttgatgggtgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttatgctgaaaat 20526635  T

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Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 18317750 - 18317840
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| ||||||||||||| ||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18317750 ttgttgtagtatgactcaaaatttgaaggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 18317840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 19705166 - 19705076
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  19705166 ttgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaagatattttgtgctgaaaat 19705076  T

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Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 22858536 - 22858447
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| || |||||||||||  | |||||||||||||||||||| ||||||| ||||||||||||||    
T  22858536 tgttgtagtatgactcaaaatttgatggatgaagaatattgttaataaaaatataaaagatttgttttaaatatactttgtgctgaaaat 22858447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 30445243 - 30445304
Alignment:
Q  320 tgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||| || ||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  30445243 tgatggatgaagaatattgttgctagaaatataaaatatttgtttcaaatatattttgtgct 30445304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 387
Target Start/End: Original strand, 17852265 - 17852355
Alignment:
Q  296 attgttgtagtatcactcaaaatttgatggttggagaatattgt--tgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||| | ||| ||||||||||||||| | ||||||||||||  |||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  17852265 attgttgaaatatgactcaaaatttgatgat-ggagaatattgtgttgctaaaaatataaaagatttgtttcaa--atattttatgctgaaaat 17852355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 30443024 - 30443097
Alignment:
Q  310 actcaaaattt--gatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgct 381  Q
    |||||||||||  ||||| || |||||||||||| | ||||||||| |||||||||||||||||||||| ||||    
T  30443024 actcaaaatttatgatggatgaagaatattgttgttaaaaatataagagatttgtttcaaatatattttttgct 30443097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 17011781 - 17011851
Alignment:
Q  300 ttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatat 371  Q
    ||||||||| ||| |||||||||||| || |||||||| ||||| |||||||||||| ||||||| ||||||    
T  17011781 ttgtagtatgacttaaaatttgatggatgaagaatattattgctaaaaatataaaag-tttgttttaaatat 17011851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 12062 - 11972
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  12062 ttgttgtagtatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttgtgctgaaaat 11972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 51709 - 51798
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  51709 tgttgtagtatgactcaaaatttgatggatggagaataatgttgctaaaaatataaaagatttgtttcaaatatattttgtggtgaaaat 51798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 50159 - 50230
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaat 369  Q
    ||||||||||| |||||||||||||||| || |||||| ||||||| |||||||||||||||||||||||||    
T  50159 tgttgtagtatgactcaaaatttgatggatgaagaataatgttgctaaaaatataaaagatttgtttcaaat 50230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 1734 - 1824
Alignment:
Q  297 ttgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    |||||||||||| ||||||||||||| ||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1734 ttgttgtagtatgactcaaaatttgaaggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 1824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 4546 - 4635
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||| ||||| |||||||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  4546 tgttgcagtataactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcgaatatatttcgtgctgaaaat 4635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 78883 - 78972
Alignment:
Q  298 tgttgtagtatcactcaaaatttgatggttggagaatattgttgctgaaaatataaaagatttgtttcaaatatattttgtgctgaaaat 387  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||||    
T  78883 tgttgtagtatgacttaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtctcaaatatattttctgctaaaaat 78972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 2273 - 2232
Alignment:
Q  335 attgttgctgaaaatataaaagatttgtttcaaatatatttt 376  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  2273 attgttgcagaaaatataaaagatttgtttcaaatatatttt 2232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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