View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12214_high_20 (Length: 261)
Name: NF12214_high_20
Description: NF12214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12214_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 41742274 - 41742041
Alignment:
| Q |
18 |
ataatttacatgtttggtttataaatctaaaatatatcgatataatagatctaaatatagtaaaaacttgtctcaaagaaatt-----tagttcaaattt |
112 |
Q |
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| T |
41742274 |
ataatttacatgtttggtttataaatctaaaatatatcgatataatagatctaaatatagtaaaaacttgtctcaaagaagtttaacatagttcaaattt |
41742175 |
T |
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| Q |
113 |
tataaacccaaacatatataaaagttaattaaatgtttgttaggattttatatgtcaaaccaataaaacgcatattgttttggttgttgaggtagagtat |
212 |
Q |
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| T |
41742174 |
tataaacccaaacatatataaaagttaattaaatgtttgttaggattttatatgtcaaaccaataaaacgcatattgttttggttgttgaggtagagtat |
41742075 |
T |
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| Q |
213 |
aaatgatttattgaaaagaattgtatcgtctgtg |
246 |
Q |
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| T |
41742074 |
aaatgatttattgaaaagaattgtgtcgtctgtg |
41742041 |
T |
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