View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12214_high_27 (Length: 222)
Name: NF12214_high_27
Description: NF12214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12214_high_27 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 28441092 - 28441284
Alignment:
| Q |
1 |
ctctatctgtgtcaaattccaggaattcgacatgaagaattttaagtaccggaaagtcaagctgaacttgagaaaaggtcgacccagaagcagttattgt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||| || ||||||| |
|
|
| T |
28441092 |
ctctatctgtgtcaaattccaggaattcgacatgaagaattttaagtaccggaaagtcaagctgtactcgagaaaagatcgacccagaaccaattattgt |
28441191 |
T |
|
| Q |
101 |
tgtcgtaaaccatcgaagcttgagaatagtaagcgtcttgcattgcaagacggttaccggcaacctcggtatgagcaggtaatgtgccttatc |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28441192 |
tgtcgtaaaccatcgaagcttgagaatagtaagcgtcttgcattgcaagacggttaccggcaacctcggtatgagcaggtaatgtgccttatc |
28441284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University