View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12216_low_2 (Length: 283)
Name: NF12216_low_2
Description: NF12216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12216_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 37167800 - 37168054
Alignment:
| Q |
14 |
agaagatactgaaacaatgtagaagtgtagaacaatttgggaacatacggcgtggacattgtattattatggtaccgaggaggaggaactgagattccca |
113 |
Q |
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| T |
37167800 |
agaagatactgaaacaatgtagaagtgtagaacaatttgggaacatacggcgtggacattgtattattatggtaccgaggaggaggaactgagattccca |
37167899 |
T |
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| Q |
114 |
catgaannnnnnnatatatgtgttgtcttgatgcagttgttacgttaattaattgtttttattgatgaattttcattattgtttcatgtattaaattaac |
213 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37167900 |
catgaatttttttatatatgtgttgtcttgatgcagttgttacgttaattaattgtttttattgatgaattttcattattgtttcatgtattaaattaac |
37167999 |
T |
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| Q |
214 |
ttataatctaatctaaatacgtaaagaacatgaaagaaattaagatgctgctttt |
268 |
Q |
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| T |
37168000 |
ttataatctaatctaaatacgtaaagaacatgaaagaaattaagatgctgctttt |
37168054 |
T |
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