View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12220_high_9 (Length: 281)
Name: NF12220_high_9
Description: NF12220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12220_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 46047212 - 46046963
Alignment:
| Q |
17 |
cattttaacaatatcagaacgaatgcaattaattaattctgatttttgtgcatatatctctaaatagtgggtgaagatataaaagatagtgctgaatatg |
116 |
Q |
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| T |
46047212 |
cattttaacaatatcagaacgaatgcaattaattaattctgatttttgtgcatatatctctaaatagtgggtgaagatataaaagatagtgctgaatatg |
46047113 |
T |
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| Q |
117 |
tcatcacacacatgcatcttgagcacatatatacatatccatctagaaacttgctgagattttgatgcatttgaccttcaaccattgaaaccctttcttc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46047112 |
tcatcacacacatgcatcttgagcacatatatacatatccatctagaaacttgctgagattttgatgcatttgaccttcaaccattgaaaccctttcttc |
46047013 |
T |
|
| Q |
217 |
aaagaacgtttcagcttaccttcggtcccataaaacttgtatctggccac |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46047012 |
aaagaacgtttcagcttaccttcggtcccataaaacttgtatctggccac |
46046963 |
T |
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