View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12221_high_18 (Length: 316)
Name: NF12221_high_18
Description: NF12221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12221_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 305
Target Start/End: Original strand, 32260162 - 32260460
Alignment:
| Q |
7 |
caattcaccataattaatgtcgaatcacaaaagtttctggaatgttacgagcttccaacaaggccttaaaatcacgcctggatatttgttgtcttgcata |
106 |
Q |
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| T |
32260162 |
caattcaccataattaatgtcgaatcacaaaagtttctggaatgttacgagcttccaacaaggccttaaaatcacgcctggatatttgttgtcttgcata |
32260261 |
T |
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| Q |
107 |
ttatgtagtcgagattttctgcattgaaggaaattatgtaatatcataatcttgttgtattaaacatggaggtggaaggttgtttaatgttgttttggtt |
206 |
Q |
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| T |
32260262 |
ttatgtagtcgagattttctgcattgaaggaaattatgtaatatcataatcttgttgtattaaacatggaggtggaaggttgtttaatgttgttttggtt |
32260361 |
T |
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| Q |
207 |
aaggaagtttaacaagaccatgtctggcttttagttcatcagatctcaaaattttaaaaagtctatttgcttaattcttttgatccaccttcatttctt |
305 |
Q |
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| T |
32260362 |
aaggaagtttaacaagaccatgtctggcttttagttcatcagatctcaaaattttaaaaagtctatttgcttccttcttttgatccaccttcatttctt |
32260460 |
T |
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