View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12232_high_1 (Length: 326)
Name: NF12232_high_1
Description: NF12232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12232_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 7 - 313
Target Start/End: Complemental strand, 41418428 - 41418121
Alignment:
| Q |
7 |
ctccgtggtatcgtttacatcatcgctcaactcctcggatccattgttgcttccgccctccttgtctttgtcaccgcttcggtaagtttaatatttcatg |
106 |
Q |
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| T |
41418428 |
ctccgtggtatcgtttacatcatcgctcaactcctcggatccattgttgcttccgccctccttgtctttgtcaccgcttcggtaagtttaatatttcatt |
41418329 |
T |
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| Q |
107 |
ggattttatac----atagaaccg----gagtgagtgttaccttcttagcaagtaat----tacgatcaaaatcaaatatatttaattaaggttatgatt |
194 |
Q |
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| T |
41418328 |
ggattttatacatatatagaaccggagtgagtgagtgttaccctcttagcaagtaattatatatgatcaaaatgaaatatatttgaat----------tt |
41418239 |
T |
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| Q |
195 |
gatgatattaaaaaatgtttgtttgcagtctgttccagcattcggactatcagagggagttggagttggaccagctttggtgttggagattgtgatgacc |
294 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41418238 |
gatgata-taaaaaatgtttgtttgcagtctgttccagcattcggactatcagagggagttggagttggaccagctttggtgttggagattgtgatgacc |
41418140 |
T |
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| Q |
295 |
tttggattggtgtacacag |
313 |
Q |
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||||||||||||||||||| |
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| T |
41418139 |
tttggattggtgtacacag |
41418121 |
T |
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