View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12235_low_18 (Length: 246)
Name: NF12235_low_18
Description: NF12235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12235_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 84 - 236
Target Start/End: Complemental strand, 9711010 - 9710854
Alignment:
| Q |
84 |
tactaaatacaaaccaactaaataaacgatattctcctatctcttaagtattctacttatgtttcaaccttttaggtcaaaaagagctccacacactaaa |
183 |
Q |
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| T |
9711010 |
tactaaatacaaaccaactaaataaacgatattctcctatctcttaagtattctacttatgtttcaaccttttaggtcaaaaagagctccacacactaaa |
9710911 |
T |
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| Q |
184 |
ggaaaataatatgatgcttg----gcattctccccatccctaagcattctacctatg |
236 |
Q |
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| T |
9710910 |
ggaaaataatatgatgcttggcatgcattctccccatccctaagcattctacctatg |
9710854 |
T |
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