View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12236_low_5 (Length: 229)
Name: NF12236_low_5
Description: NF12236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12236_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 51593321 - 51593519
Alignment:
| Q |
15 |
tgaaaaataagtgatctggattaatggcttgaatcttggtcaatttcaagaggtatctccccggaactactactgttgttgatggttgtagatgctatgc |
114 |
Q |
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| T |
51593321 |
tgaaaaataagtggtctggattaatggcttgaatcttggtcaatttcaagaggtatctccccggaactactactgttgttgatggttgtagatgctatgc |
51593420 |
T |
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| Q |
115 |
taggtaggatgtctgttgagtggatgttccgtttcctctctttctcatctaattatttcctatctcctttgttggtttctgtttggcaagaattggtat |
213 |
Q |
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| T |
51593421 |
taggtaggatgtctgttgagtggatgttccgtttcctctctttttcatctaattatttcctatctcctttgttggtttctgtttggcaagaattggtat |
51593519 |
T |
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