View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12239_low_5 (Length: 552)
Name: NF12239_low_5
Description: NF12239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12239_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 500; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 500; E-Value: 0
Query Start/End: Original strand, 1 - 536
Target Start/End: Original strand, 10929380 - 10929915
Alignment:
| Q |
1 |
tcgaacagactccggtgacacagctttgatggtttgtgcaaaatataaacaagaggagtgtctcaaagtactaacaagggctggtgctgattttggcttg |
100 |
Q |
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| T |
10929380 |
tcgaacagactgcggtgacacagctttgatgatttgtgcaaaatataaacaagaggagtgtctcaaagtactaacaagggctggtgctgatttttgcttg |
10929479 |
T |
|
| Q |
101 |
gtgaacagtgcgggtcaatctgcaagttcaattgccgagtcgtacaagtggtcccatggttttcaacaagtagtggtggatgtaattagaaatggcaaga |
200 |
Q |
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| T |
10929480 |
gtgaacagtgcaggtcaatctgcaagttcaattgccgagtcatacaagtggtcccatggttttcaacaagcagtggtggatgtaattagaaatggcaaga |
10929579 |
T |
|
| Q |
201 |
tacccaaatccagcaatacttctactttttcccctttgatttttgtatctaaggcaggagatgctgaggcattgaaaactgtcattgaatctggagaatt |
300 |
Q |
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| T |
10929580 |
tacccaaatccagcaatacttctactttttcccctttgatttttgtatctaaggcaggagatgctgaagcattgaaaactgtcattgaatctggagaatt |
10929679 |
T |
|
| Q |
301 |
tgatcttgactatcaagatgatagtggtttctcagcggctatgcatacagctgtgaaaggtcacgttgagtcatttcgattgcttgtatatgctggagcc |
400 |
Q |
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| T |
10929680 |
tgatcttgactatcaagatgatagtggtttctcagcggctatgcatacagctgtgaaaggtcacgttgagtcatttcgattgcttgtatatgctggagcc |
10929779 |
T |
|
| Q |
401 |
gatgtaaagttatgcaataaatctggtgaaacagcaataacactatctgaattgaatcagaaatgtaatttatttgaaaaggtcatgcttgaatttacac |
500 |
Q |
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| T |
10929780 |
gatgtgaagttatgcaataaatctggtgaaacagcaataacactatctgaattgaatcagaactgtaatttatttgaaaaggtcatgcttgaatttacac |
10929879 |
T |
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| Q |
501 |
ttgaaaagggtaatcaaaatactggtggcttctatg |
536 |
Q |
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| T |
10929880 |
ttgaaaagggtaatcaaaatactggtggcttctatg |
10929915 |
T |
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