View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12240_low_3 (Length: 384)

Name: NF12240_low_3
Description: NF12240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12240_low_3
NF12240_low_3
[»] chr1 (68 HSPs)
chr1 (12-374)||(48947192-48947554)
chr1 (17-142)||(16113912-16114039)
chr1 (22-142)||(33791727-33791847)
chr1 (17-139)||(39973885-39974007)
chr1 (17-133)||(35259043-35259159)
chr1 (22-108)||(31042999-31043085)
chr1 (17-142)||(34861200-34861325)
chr1 (22-138)||(4040891-4041007)
chr1 (22-138)||(40286856-40286972)
chr1 (17-123)||(3047860-3047966)
chr1 (44-141)||(38172665-38172762)
chr1 (22-142)||(49478810-49478931)
chr1 (24-132)||(40053293-40053401)
chr1 (17-121)||(42573778-42573882)
chr1 (25-142)||(48874-48991)
chr1 (24-141)||(35543392-35543509)
chr1 (34-134)||(290601-290701)
chr1 (21-133)||(24034054-24034166)
chr1 (35-137)||(51904562-51904664)
chr1 (35-135)||(1656447-1656548)
chr1 (22-126)||(10355031-10355135)
chr1 (45-142)||(31652643-31652740)
chr1 (22-135)||(46804819-46804932)
chr1 (24-135)||(759221-759333)
chr1 (44-139)||(30548293-30548387)
chr1 (45-132)||(40203076-40203163)
chr1 (24-109)||(31807800-31807886)
chr1 (22-140)||(40341599-40341718)
chr1 (50-124)||(9931801-9931875)
chr1 (22-138)||(290841-290957)
chr1 (22-110)||(26700247-26700335)
chr1 (75-142)||(12148287-12148354)
chr1 (46-133)||(44461597-44461683)
chr1 (35-124)||(32787261-32787351)
chr1 (22-123)||(31398418-31398519)
chr1 (56-125)||(45753482-45753551)
chr1 (35-138)||(24075110-24075214)
chr1 (49-141)||(40377067-40377159)
chr1 (45-124)||(5115612-5115691)
chr1 (22-109)||(33744156-33744243)
chr1 (17-95)||(4521043-4521121)
chr1 (22-111)||(27934747-27934837)
chr1 (69-138)||(30350911-30350978)
chr1 (17-143)||(36321612-36321738)
chr1 (58-143)||(39807557-39807643)
chr1 (18-123)||(5423753-5423858)
chr1 (55-124)||(25302103-25302172)
chr1 (75-124)||(47364049-47364098)
chr1 (45-142)||(50974562-50974659)
chr1 (17-97)||(37037640-37037720)
chr1 (35-123)||(44442261-44442349)
chr1 (20-123)||(4220636-4220739)
chr1 (37-132)||(14758572-14758667)
chr1 (45-140)||(31745397-31745492)
chr1 (70-125)||(34596125-34596180)
chr1 (40-123)||(43216299-43216382)
chr1 (70-124)||(9590913-9590967)
chr1 (82-140)||(44719239-44719297)
chr1 (22-111)||(5250920-5251009)
chr1 (56-125)||(7750463-7750532)
chr1 (40-85)||(8791485-8791530)
chr1 (71-132)||(18038940-18039001)
chr1 (35-76)||(19533280-19533321)
chr1 (38-137)||(38320538-38320636)
chr1 (267-332)||(39988000-39988065)
chr1 (267-331)||(37621614-37621678)
chr1 (88-124)||(42564262-42564298)
chr1 (49-125)||(50222612-50222688)
[»] chr7 (50 HSPs)
chr7 (19-142)||(8237945-8238068)
chr7 (25-133)||(19619993-19620101)
chr7 (24-142)||(34299731-34299849)
chr7 (17-142)||(5907817-5907941)
chr7 (34-143)||(5482395-5482503)
chr7 (22-142)||(43492189-43492310)
chr7 (22-133)||(44452038-44452150)
chr7 (24-115)||(24299146-24299237)
chr7 (21-142)||(24610826-24610947)
chr7 (22-142)||(3267598-3267718)
chr7 (24-111)||(41150034-41150121)
chr7 (19-132)||(25036962-25037076)
chr7 (22-126)||(39316297-39316401)
chr7 (24-143)||(26871771-26871890)
chr7 (17-123)||(34681685-34681791)
chr7 (22-138)||(23682444-23682559)
chr7 (24-140)||(39241570-39241687)
chr7 (44-130)||(7432656-7432743)
chr7 (35-132)||(38988717-38988816)
chr7 (17-122)||(18926320-18926425)
chr7 (22-99)||(31498660-31498737)
chr7 (22-111)||(46716177-46716266)
chr7 (22-142)||(10031909-10032029)
chr7 (45-136)||(38452192-38452283)
chr7 (24-133)||(26872781-26872891)
chr7 (20-78)||(35395904-35395962)
chr7 (17-127)||(47507603-47507713)
chr7 (18-109)||(3256648-3256740)
chr7 (22-142)||(9097683-9097802)
chr7 (63-115)||(32699395-32699447)
chr7 (22-121)||(41431099-41431199)
chr7 (22-97)||(1360534-1360609)
chr7 (17-142)||(27123267-27123393)
chr7 (22-95)||(33887887-33887960)
chr7 (22-126)||(35496576-35496681)
chr7 (22-115)||(35599817-35599910)
chr7 (89-142)||(47305514-47305567)
chr7 (35-84)||(48837977-48838025)
chr7 (40-132)||(31902747-31902839)
chr7 (22-80)||(6392179-6392237)
chr7 (45-143)||(8170052-8170150)
chr7 (45-99)||(10453485-10453539)
chr7 (46-132)||(34398074-34398159)
chr7 (50-135)||(8327824-8327909)
chr7 (45-126)||(17883317-17883398)
chr7 (47-124)||(40722382-40722459)
chr7 (17-89)||(25176329-25176401)
chr7 (19-126)||(26239544-26239652)
chr7 (45-124)||(35567135-35567215)
chr7 (57-105)||(37352436-37352484)
[»] chr8 (58 HSPs)
chr8 (17-142)||(12002260-12002385)
chr8 (17-133)||(1876479-1876595)
chr8 (17-142)||(14016855-14016980)
chr8 (22-137)||(11533230-11533345)
chr8 (26-124)||(44220716-44220814)
chr8 (17-133)||(31844214-31844331)
chr8 (24-132)||(32271170-32271278)
chr8 (65-142)||(36907841-36907918)
chr8 (22-142)||(39594477-39594597)
chr8 (35-133)||(40628964-40629062)
chr8 (22-131)||(38019418-38019526)
chr8 (24-123)||(44907218-44907318)
chr8 (22-133)||(7627844-7627955)
chr8 (22-132)||(38047607-38047718)
chr8 (22-132)||(2376726-2376836)
chr8 (23-111)||(20522943-20523031)
chr8 (15-110)||(37449531-37449626)
chr8 (17-132)||(1773799-1773915)
chr8 (29-142)||(41959969-41960083)
chr8 (22-126)||(1445137-1445242)
chr8 (12-121)||(31264985-31265094)
chr8 (22-110)||(18842275-18842363)
chr8 (35-142)||(30486620-30486728)
chr8 (22-132)||(39691112-39691222)
chr8 (40-141)||(4278957-4279057)
chr8 (22-133)||(5020051-5020160)
chr8 (12-111)||(24869402-24869497)
chr8 (22-133)||(35501064-35501176)
chr8 (40-124)||(35592455-35592539)
chr8 (42-139)||(14453699-14453794)
chr8 (71-133)||(34722774-34722837)
chr8 (22-84)||(30158108-30158170)
chr8 (22-116)||(37564346-37564440)
chr8 (24-116)||(9629833-9629925)
chr8 (22-135)||(12782775-12782888)
chr8 (51-132)||(26014752-26014833)
chr8 (17-132)||(42636363-42636479)
chr8 (34-67)||(9005010-9005043)
chr8 (31-132)||(27505979-27506079)
chr8 (17-109)||(37813423-37813516)
chr8 (35-132)||(43419730-43419827)
chr8 (35-116)||(43841043-43841124)
chr8 (22-94)||(24103087-24103159)
chr8 (22-126)||(34336477-34336581)
chr8 (36-132)||(41105996-41106092)
chr8 (24-108)||(42801078-42801162)
chr8 (74-121)||(7931765-7931812)
chr8 (45-124)||(45368729-45368808)
chr8 (22-116)||(33636716-33636810)
chr8 (90-139)||(32133686-32133735)
chr8 (17-110)||(41385258-41385351)
chr8 (22-83)||(42022640-42022701)
chr8 (80-141)||(44960519-44960580)
chr8 (40-124)||(6270334-6270418)
chr8 (22-141)||(33013043-33013163)
chr8 (92-132)||(33285923-33285963)
chr8 (22-109)||(33949571-33949658)
chr8 (54-126)||(44254131-44254203)
[»] chr4 (68 HSPs)
chr4 (22-141)||(53261556-53261675)
chr4 (22-142)||(40252654-40252773)
chr4 (22-103)||(49951717-49951798)
chr4 (22-141)||(53622301-53622421)
chr4 (20-123)||(36876064-36876167)
chr4 (17-142)||(37461460-37461585)
chr4 (18-123)||(45743309-45743414)
chr4 (22-123)||(52650697-52650798)
chr4 (24-133)||(3179003-3179113)
chr4 (22-123)||(31262914-31263014)
chr4 (22-123)||(47937861-47937962)
chr4 (17-133)||(49795138-49795254)
chr4 (35-138)||(38354473-38354577)
chr4 (17-133)||(17970803-17970917)
chr4 (31-152)||(18939846-18939967)
chr4 (25-98)||(23136539-23136612)
chr4 (36-132)||(41370166-41370262)
chr4 (22-134)||(50617494-50617606)
chr4 (24-122)||(4391968-4392067)
chr4 (35-141)||(35153262-35153369)
chr4 (22-142)||(32175431-32175550)
chr4 (23-121)||(25042743-25042837)
chr4 (17-124)||(21687591-21687699)
chr4 (17-141)||(22889253-22889377)
chr4 (17-141)||(22940917-22941041)
chr4 (68-143)||(20022234-20022309)
chr4 (22-116)||(2063473-2063567)
chr4 (56-142)||(49446581-49446667)
chr4 (17-132)||(8297864-8297980)
chr4 (17-88)||(21241120-21241191)
chr4 (29-139)||(39767212-39767323)
chr4 (49-112)||(44570122-44570185)
chr4 (24-114)||(49622961-49623052)
chr4 (34-132)||(7996722-7996816)
chr4 (24-115)||(19597165-19597256)
chr4 (56-127)||(36721589-36721660)
chr4 (56-142)||(49421882-49421969)
chr4 (22-111)||(12618713-12618802)
chr4 (24-141)||(39724055-39724175)
chr4 (17-137)||(20390018-20390138)
chr4 (17-121)||(23016231-23016335)
chr4 (34-137)||(23614626-23614729)
chr4 (22-126)||(25115267-25115371)
chr4 (17-109)||(44690284-44690376)
chr4 (48-111)||(14949006-14949069)
chr4 (22-93)||(24369405-24369476)
chr4 (22-93)||(37179689-37179760)
chr4 (82-141)||(41468142-41468201)
chr4 (24-123)||(48097952-48098051)
chr4 (70-124)||(1696194-1696248)
chr4 (22-116)||(24546722-24546816)
chr4 (71-141)||(38949048-38949118)
chr4 (22-84)||(40173524-40173586)
chr4 (70-132)||(41956428-41956490)
chr4 (45-125)||(50115068-50115145)
chr4 (165-210)||(31295885-31295930)
chr4 (35-99)||(41394013-41394078)
chr4 (45-122)||(51105943-51106020)
chr4 (22-126)||(51834912-51835017)
chr4 (22-86)||(2818357-2818421)
chr4 (70-142)||(7628005-7628077)
chr4 (17-61)||(21240662-21240706)
chr4 (74-126)||(24753978-24754030)
chr4 (22-110)||(27748438-27748526)
chr4 (17-132)||(32055338-32055454)
chr4 (72-116)||(42901983-42902027)
chr4 (22-109)||(42956992-42957080)
chr4 (70-142)||(44647869-44647941)
[»] chr6 (28 HSPs)
chr6 (24-142)||(29716752-29716871)
chr6 (35-135)||(10364754-10364854)
chr6 (154-230)||(33619252-33619328)
chr6 (22-142)||(23344569-23344690)
chr6 (22-116)||(13445745-13445839)
chr6 (22-139)||(5704549-5704665)
chr6 (35-143)||(21130707-21130816)
chr6 (22-132)||(27752644-27752759)
chr6 (46-141)||(34552311-34552407)
chr6 (12-123)||(6586424-6586535)
chr6 (35-142)||(10429739-10429845)
chr6 (42-142)||(34552165-34552265)
chr6 (23-139)||(34552494-34552610)
chr6 (12-121)||(3753103-3753213)
chr6 (12-121)||(3769326-3769436)
chr6 (73-141)||(1479081-1479149)
chr6 (19-66)||(26187510-26187557)
chr6 (22-132)||(27778752-27778862)
chr6 (45-111)||(6546738-6546804)
chr6 (55-125)||(7465508-7465578)
chr6 (90-132)||(26187452-26187494)
chr6 (22-132)||(30509314-30509424)
chr6 (45-123)||(31702747-31702825)
chr6 (232-326)||(33618740-33618834)
chr6 (24-133)||(354576-354685)
chr6 (70-138)||(22695473-22695542)
chr6 (22-126)||(2692434-2692538)
chr6 (17-117)||(12132520-12132620)
[»] chr3 (50 HSPs)
chr3 (22-141)||(48551038-48551157)
chr3 (34-132)||(14146110-14146208)
chr3 (22-135)||(3026979-3027093)
chr3 (12-133)||(12140133-12140255)
chr3 (22-132)||(45757927-45758037)
chr3 (17-142)||(24313544-24313670)
chr3 (24-132)||(20821303-20821412)
chr3 (22-142)||(25317803-25317923)
chr3 (22-143)||(46725655-46725776)
chr3 (60-133)||(33072108-33072181)
chr3 (22-109)||(29612018-29612106)
chr3 (35-111)||(37388418-37388494)
chr3 (17-116)||(54911194-54911293)
chr3 (56-142)||(1511367-1511453)
chr3 (40-133)||(40614263-40614356)
chr3 (22-142)||(22772858-22772979)
chr3 (22-99)||(28691955-28692032)
chr3 (8-132)||(49168725-49168849)
chr3 (50-142)||(18399147-18399239)
chr3 (45-132)||(1829243-1829330)
chr3 (22-113)||(53040467-53040558)
chr3 (26-110)||(9342672-9342757)
chr3 (22-95)||(48322241-48322314)
chr3 (22-79)||(50644132-50644189)
chr3 (101-141)||(39651994-39652034)
chr3 (24-115)||(45584343-45584432)
chr3 (70-125)||(25548203-25548258)
chr3 (17-95)||(37708430-37708508)
chr3 (17-118)||(38009026-38009128)
chr3 (63-133)||(52340118-52340188)
chr3 (22-111)||(2831545-2831634)
chr3 (25-126)||(37359467-37359570)
chr3 (42-95)||(40546345-40546398)
chr3 (45-125)||(19898107-19898187)
chr3 (70-142)||(54911986-54912058)
chr3 (46-93)||(25061987-25062034)
chr3 (19-126)||(48811372-48811479)
chr3 (17-112)||(54290795-54290890)
chr3 (18-88)||(12908860-12908930)
chr3 (22-132)||(23554672-23554781)
chr3 (88-133)||(27968262-27968307)
chr3 (41-142)||(34758946-34759047)
chr3 (50-127)||(41750755-41750832)
chr3 (47-116)||(43803992-43804061)
chr3 (12-116)||(4305156-4305260)
chr3 (71-123)||(40690235-40690287)
chr3 (52-116)||(46547794-46547858)
chr3 (35-95)||(46711949-46712009)
chr3 (223-275)||(53195445-53195497)
chr3 (45-121)||(53766702-53766777)
[»] chr5 (48 HSPs)
chr5 (20-143)||(14309071-14309197)
chr5 (24-138)||(38594923-38595037)
chr5 (22-141)||(26453630-26453748)
chr5 (51-137)||(16636656-16636742)
chr5 (24-140)||(17774272-17774388)
chr5 (23-140)||(26432261-26432378)
chr5 (35-139)||(22601786-22601890)
chr5 (37-140)||(27325814-27325917)
chr5 (22-110)||(12221435-12221523)
chr5 (22-89)||(41568708-41568775)
chr5 (22-116)||(4695070-4695164)
chr5 (35-133)||(21259415-21259513)
chr5 (18-142)||(5356286-5356410)
chr5 (22-138)||(29829588-29829704)
chr5 (49-139)||(3263772-3263862)
chr5 (22-132)||(10228317-10228426)
chr5 (45-135)||(27794854-27794944)
chr5 (17-142)||(5758555-5758680)
chr5 (17-140)||(10410443-10410567)
chr5 (35-115)||(26686667-26686747)
chr5 (35-115)||(26956398-26956478)
chr5 (24-111)||(36609150-36609237)
chr5 (49-137)||(8247092-8247180)
chr5 (35-141)||(43000760-43000868)
chr5 (42-140)||(28639570-28639669)
chr5 (49-139)||(10051755-10051845)
chr5 (56-142)||(31672444-31672530)
chr5 (22-132)||(31914168-31914277)
chr5 (17-111)||(39177675-39177768)
chr5 (24-97)||(26663635-26663708)
chr5 (24-97)||(26935230-26935303)
chr5 (82-142)||(22473493-22473553)
chr5 (22-116)||(967100-967194)
chr5 (17-126)||(30104797-30104907)
chr5 (17-142)||(30501127-30501253)
chr5 (17-142)||(30541470-30541596)
chr5 (70-116)||(31889662-31889708)
chr5 (17-95)||(34032125-34032203)
chr5 (45-121)||(14475009-14475085)
chr5 (45-132)||(14042484-14042571)
chr5 (22-116)||(25437888-25437983)
chr5 (17-131)||(779079-779192)
chr5 (57-138)||(28207696-28207778)
chr5 (22-111)||(2918616-2918705)
chr5 (71-132)||(20125652-20125713)
chr5 (22-123)||(24041030-24041131)
chr5 (22-67)||(36160317-36160362)
chr5 (24-60)||(9740932-9740968)
[»] chr2 (66 HSPs)
chr2 (17-135)||(12848467-12848585)
chr2 (17-121)||(24389632-24389736)
chr2 (34-133)||(33068540-33068639)
chr2 (22-123)||(33454966-33455067)
chr2 (38-142)||(431621-431726)
chr2 (22-121)||(6083911-6084010)
chr2 (22-124)||(6334678-6334780)
chr2 (35-124)||(12205530-12205620)
chr2 (22-116)||(565706-565802)
chr2 (24-109)||(8964392-8964477)
chr2 (35-132)||(30523014-30523111)
chr2 (38-133)||(42342487-42342581)
chr2 (22-132)||(33634796-33634906)
chr2 (24-137)||(6411367-6411480)
chr2 (42-135)||(32066740-32066833)
chr2 (24-132)||(9049148-9049256)
chr2 (17-133)||(3074073-3074187)
chr2 (12-109)||(2825977-2826074)
chr2 (22-99)||(4654992-4655069)
chr2 (19-138)||(9448450-9448570)
chr2 (22-138)||(21277551-21277666)
chr2 (35-142)||(40874826-40874934)
chr2 (22-105)||(12762896-12762979)
chr2 (35-86)||(30822764-30822815)
chr2 (17-123)||(13538389-13538495)
chr2 (22-140)||(29685694-29685812)
chr2 (17-103)||(30869589-30869673)
chr2 (22-126)||(18043839-18043942)
chr2 (34-132)||(11385462-11385561)
chr2 (59-137)||(28695605-28695684)
chr2 (22-140)||(2796517-2796626)
chr2 (39-116)||(27692744-27692822)
chr2 (18-72)||(28858098-28858152)
chr2 (17-106)||(3882609-3882698)
chr2 (70-139)||(5961954-5962023)
chr2 (22-111)||(11944892-11944981)
chr2 (35-119)||(37284896-37284981)
chr2 (53-133)||(10183219-10183299)
chr2 (23-110)||(9153494-9153581)
chr2 (65-116)||(15806054-15806105)
chr2 (17-111)||(41543970-41544065)
chr2 (35-137)||(3666431-3666533)
chr2 (55-125)||(6761731-6761801)
chr2 (90-132)||(33898643-33898685)
chr2 (22-136)||(39647767-39647881)
chr2 (75-124)||(7271831-7271880)
chr2 (35-120)||(8086966-8087051)
chr2 (39-124)||(8333580-8333665)
chr2 (22-139)||(44941072-44941189)
chr2 (24-116)||(814996-815088)
chr2 (27-115)||(18684365-18684453)
chr2 (37-141)||(33962932-33963036)
chr2 (34-137)||(44838626-44838730)
chr2 (24-111)||(19890208-19890295)
chr2 (22-109)||(25622532-25622618)
chr2 (24-99)||(37313700-37313775)
chr2 (70-132)||(16944811-16944873)
chr2 (70-132)||(17015476-17015538)
chr2 (35-109)||(19495215-19495288)
chr2 (17-111)||(32859778-32859872)
chr2 (88-125)||(11364702-11364739)
chr2 (278-339)||(14368577-14368638)
chr2 (88-125)||(32787586-32787623)
chr2 (17-132)||(1334881-1334997)
chr2 (88-124)||(21004775-21004811)
chr2 (22-122)||(42924425-42924525)
[»] scaffold0010 (1 HSPs)
scaffold0010 (17-116)||(26694-26793)
[»] scaffold0236 (1 HSPs)
scaffold0236 (35-143)||(19578-19686)
[»] scaffold0037 (1 HSPs)
scaffold0037 (35-138)||(35274-35376)
[»] scaffold0053 (1 HSPs)
scaffold0053 (17-78)||(5755-5816)
[»] scaffold0011 (1 HSPs)
scaffold0011 (19-111)||(219185-219277)


Alignment Details
Target: chr1 (Bit Score: 351; Significance: 0; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 12 - 374
Target Start/End: Original strand, 48947192 - 48947554
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48947192 cctggggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 48947291  T
Q  112 gttaccatttaaagtccttaactagtgccccatttcccatatttatatatagttagttagtagttttatggagttaggaaatggtggttaataaactacc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48947292 gttaccatttaaagtccttaactagtgccccatttcccatatttatatatagttagttagtagttttatggagttaggaaatggtggttaataaactacc 48947391  T
Q  212 tcttctactatataaatatgcattgtatgtgcaaggaaaatatgaagaaattaataatgaaattctagtctttcccccatttctatggagacctattcct 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48947392 tcttctactatataaatatgcattgtatgtgcaaggaaaatatgaagaaattaataatgaaattctagtctttcccccatttctatggagacctattcct 48947491  T
Q  312 tctcgaattggaatagttatctgtatcatcatatatcttatcagcctgctgctgatgtccatc 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  48947492 tctcgaattggaatagttatctgtatcatcatatatcttatcagcctgctgctaatgtgcatc 48947554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 16113912 - 16114039
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat--aaaaagtt 114  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  16113912 ggcactctttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgcactgattacacaaactttcataaaaaaagtt 16114011  T
Q  115 accatttaaagtccttaactagtgcccc 142  Q
    |||||||||   |||||| |||||||||    
T  16114012 accatttaagccccttaagtagtgcccc 16114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 33791847 - 33791727
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || |||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||    
T  33791847 tctttaagtatgctaaattaagtaattattcttttaaaatgtcaaatttttcaatttccaatacaccgattacacaaactttcataaaaagttactattt 33791748  T
Q  122 aaagtccttaactagtgcccc 142  Q
    |||||| ||||| ||||||||    
T  33791747 aaagtctttaaccagtgcccc 33791727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 39973885 - 39974007
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| |||||| ||||| |||||||||||||||     
T  39973885 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcattgattatacaaactttcataaaaagttat 39973984  T
Q  117 catttaaagtccttaactagtgc 139  Q
    ||||||||||| ||||| |||||    
T  39973985 catttaaagtctttaaccagtgc 39974007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 35259159 - 35259043
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| |||||||| || |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||  |||||||||||    
T  35259159 ggcactctttaagtatgctaaattaagaaattattttttaaaaatgtaaaagttttcaatttccaatgcgctgattacacacacatttgtaaaaagttac 35259060  T
Q  117 catttaaagtccttaac 133  Q
    |||||||||||||||||    
T  35259059 catttaaagtccttaac 35259043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 31042999 - 31043085
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataa 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  31042999 tctttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgattacacaaactttcataa 31043085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 34861325 - 34861200
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| ||| || ||||||||||  | ||    
T  34861325 ggcactctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaatacactgatttcactaaatttcataaaagttaac 34861226  T
Q  117 catttaaagtccttaactagtgcccc 142  Q
     |||||| ||| ||||| ||||||||    
T  34861225 tatttaaggtcattaacgagtgcccc 34861200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 4040891 - 4041007
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||||||  |||||||||||||||||   ||||| |||||||||||||||||| ||||  ||| |||||||||| ||||| ||||||||| |||||    
T  4040891 tctttaagcattttaaattaagtaattattacataaaagtgtcaaagttttcaattttcaatatacttattacacaaactttcacaaaaagttatcattt 4040990  T
Q  122 aaagtccttaactagtg 138  Q
    |||||||||||||||||    
T  4040991 aaagtccttaactagtg 4041007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 40286856 - 40286972
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||| |||| |||||| ||| |||||   |||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||    
T  40286856 tctttaagcatgctaaataaagtcattattctttcaaaattaaaaagttttcaatttccaatgcactgagtacacaaacttttataaaaagttactattt 40286955  T
Q  122 aaagtccttaactagtg 138  Q
    ||||| |||||||||||    
T  40286956 aaagttcttaactagtg 40286972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 3047860 - 3047966
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| ||||||||||||||| || ||||||||||||||| ||||| |||||||||||| |||||| ||||| ||||||||||| ||||    
T  3047860 ggcactctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcattgattaaacaaactttcataaaaaattac 3047959  T
Q  117 catttaa 123  Q
     ||||||    
T  3047960 tatttaa 3047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 38172665 - 38172762
Alignment:
Q  44 taattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 141  Q
    |||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||    
T  38172665 taattattctttaaaaatgtaaaagtttttaatttttaatgcactgattacacaaacttttataaaaagttatcatttaaagtccttaacaagtgccc 38172762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 49478810 - 49478931
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 120  Q
    |||||||||||  | | |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||  || |||||||||||||    
T  49478810 tctttaagcatgttgagttaagtaattattttttttaaatgtcaaaagttttcaatttccaatgcactgattacacaaacttctatgaaaagttaccatt 49478909  T
Q  121 taaagtccttaactagtgcccc 142  Q
    |||  |||||||| ||||||||    
T  49478910 taagttccttaaccagtgcccc 49478931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 40053293 - 40053401
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    ||||||||| |||||||| |||||| || |||||||||||||||||||||||||| |||| || | |||||||||| |||||||||||||||| ||||||    
T  40053293 tttaagcattctaaattaggtaattgttctttaaaaatgtcaaagttttcaattttcaatacatttattacacaaactttcataaaaagttactatttaa 40053392  T
Q  124 agtccttaa 132  Q
     ||| ||||    
T  40053393 ggtcattaa 40053401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 42573882 - 42573778
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||| || ||||||||||| |||||||||||||| ||||| ||  ||||||||||||    
T  42573882 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaggttttcaattttcaatgcactgattatacaaacttcaataaaaagttac 42573783  T
Q  117 cattt 121  Q
    |||||    
T  42573782 cattt 42573778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 48991 - 48874
Alignment:
Q  25 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||| ||| |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||| |||| || |||     
T  48991 ttaatcatgctaaattaagtaattattcttgaaaaatgtaaaagttttcaattttcaatgcaccgattacacaaactttcataaaaatttactatgtaag 48892  T
Q  125 gtccttaactagtgcccc 142  Q
    || |||||  ||||||||    
T  48891 gttcttaatgagtgcccc 48874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 35543509 - 35543392
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||  | | |||||||||| |||  || |||||||||||||||    
T  35543509 tttaagcatgctaaattaagtaattatttttttaaaatatcaaagttttcaatttccaatatattaattacacaaacttttgtacaaagttaccatttaa 35543410  T
Q  124 agtccttaactagtgccc 141  Q
     ||| ||||  |||||||    
T  35543409 ggtctttaataagtgccc 35543392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 290601 - 290701
Alignment:
Q  34 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||  || ||||||||  |||||| || ||||||    
T  290601 ctaaattaagtaattattcttttaaaatgtcaaagttttcaatttacaatgcactgattacacaaacttcaatgaaaagttattatttaacgttcttaac 290700  T
Q  134 t 134  Q
    |    
T  290701 t 290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 24034054 - 24034166
Alignment:
Q  21 ttctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 120  Q
    |||||||||||||||||||  |||||||||| ||| ||||| | ||||||||||||||| ||||||||||||||||||| | | ||||||  |||| |||    
T  24034054 ttctttaagcatactaaatagagtaattattctttcaaaatttaaaagttttcaatttctaatgcactgattacacaaactcttataaaagtttactatt 24034153  T
Q  121 taaagtccttaac 133  Q
    |||||||| ||||    
T  24034154 taaagtccataac 24034166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 51904664 - 51904562
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 134  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |  | |||||||| ||||||||||| || | |||||| ||||||||||    
T  51904664 taaattaagtaattattcttttaaaatgttaaagttttcaatttccaatgccccaactacacaaactttcataaaaaattgcaatttaaggtccttaact 51904565  T
Q  135 agt 137  Q
    |||    
T  51904564 agt 51904562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 1656447 - 1656548
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||  | | ||||||| ||||||||||||||||  |||||| ||| |||||    
T  1656447 taaattaaataattattttttaaaaatgtcaaaattttcaatttccaatgcattttaatacacaatttttcataaaaagttattatttaaggtcattaac 1656546  T
Q  134 ta 135  Q
    ||    
T  1656547 ta 1656548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 10355135 - 10355031
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || |||||| ||||||||||||||||||||| || || |||||||||||||||  || |||| |||||| || |||||||| |||||||||    
T  10355135 tctttaagtattctaaataaagtaattattttttaaaaatatctaaattttcaatttccaatataccgatttcacaaacttccataaaaaattaccattt 10355036  T
Q  122 aaagt 126  Q
    |||||    
T  10355035 aaagt 10355031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 31652643 - 31652740
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||||||| |||||| ||||||  ||| ||||||| ||||| |||||||||| |||||||| | | |||||||||||||| ||||||||||||||||    
T  31652643 aattattttataaaaaagtcaaatattttaatttccgatgcaatgattacacatattttcatgataggttaccatttaaagcccttaactagtgcccc 31652740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 46804932 - 46804819
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| ||||||||| |||| ||||||||||||||  ||| |||  ||||||||||||||||||||||  || |||||||| |  |||||||||    
T  46804932 tctttaagcattctaaattaattaataattttttaaaaatgataaactttctaatttccaatgcactgattacattaactttcataatagtttaccattt 46804833  T
Q  122 aaagtccttaacta 135  Q
    || ||| |||||||    
T  46804832 aaggtcattaacta 46804819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 759333 - 759221
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 122  Q
    ||||||||| ||||||||| |||| ||||  ||||| ||||||||||| ||||||||||| ||| | |||||||||| || |||||||  ||||||||||    
T  759333 tttaagcattctaaattaaataatcatttcataaaattgtcaaagtttccaatttccaatacactttattacacaaacttacataaaagattaccattta 759234  T
Q  123 aagtccttaacta 135  Q
    |||| ||||||||    
T  759233 aagttcttaacta 759221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 30548293 - 30548387
Alignment:
Q  44 taattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 139  Q
    |||| ||||||||||| || |||| ||||||||||||||| |||||||||||| || ||||||||||  ||||||||||| || ||||||||||||    
T  30548293 taatcattttttaaaattgacaaacttttcaatttccaatacactgattacactaactttcataaaagtttaccatttaaggt-cttaactagtgc 30548387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 40203163 - 40203076
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||  |||||| ||||||  ||||||||||||||||| |||||||||| ||||||| | ||||||||||||||||| ||||||    
T  40203163 aattatttcataaaaaagtcaaatatttcaatttccaatgcattgattacacatattttcagacaaagttaccatttaaagaccttaa 40203076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 31807886 - 31807800
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaa 109  Q
    ||||||||| ||||| |||||||||||| ||||||||||| | |||||||||||| |||||||| | |||||||||| |||||||||    
T  31807886 tttaagcattctaaaataagtaattattctttaaaaatgtgatagttttcaattttcaatgcactttattacacaaactttcataaa 31807800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 40341599 - 40341718
Alignment:
Q  22 tctttaagcatactaaattaagtaattatttt-ttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 120  Q
    |||||||| || ||||||||||||||| ||||   |||||| ||||| |||||||||| ||||||||  ||||||| || ||||||||||  |||| |||    
T  40341599 tctttaagtattctaaattaagtaatttttttaaaaaaaatatcaaacttttcaattttcaatgcaccaattacactaactttcataaaagtttacgatt 40341698  T
Q  121 taaagtccttaactagtgcc 140  Q
    ||| |||||||| |||||||    
T  40341699 taaggtccttaattagtgcc 40341718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 9931801 - 9931875
Alignment:
Q  50 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||||| |||||||||||||||||||||| |||| || | |||||||||| ||| ||||||| ||||||||||||    
T  9931801 tttttttaaaatgtcaaagttttcaattttcaatacattaattacacaaacttttataaaaaattaccatttaaa 9931875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 290957 - 290841
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| ||||||  |||||||||| ||| ||||| | |||||||| |||||||||||| |||| |||||| | ||| |||||| ||||| || |    
T  290957 tctttaagcatgctaaatagagtaattattctttcaaaatttaaaagtttttaatttccaatgcgctgactacacatacttttataaaaggttactatct 290858  T
Q  122 aaagtccttaactagtg 138  Q
    || ||| ||| ||||||    
T  290857 aaggtctttagctagtg 290841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 26700247 - 26700335
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 110  Q
    ||||||| |||||||||| ||||||||||| ||| |||||   |||||||| |||||||||| |||| |||||||||| ||| ||||||    
T  26700247 tctttaaacatactaaataaagtaattattcttttaaaattaaaaagtttttaatttccaatacactcattacacaaacttttataaaa 26700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 12148354 - 12148287
Alignment:
Q  75 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    |||||||||||| || ||||||| |||||||| | |||||||||||||||| | ||||||||||||||    
T  12148354 atttccaatgcattggttacacatattttcatgataagttaccatttaaagactttaactagtgcccc 12148287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 44461597 - 44461683
Alignment:
Q  46 attattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||| ||| |||||||||||||||| |||||  |||||| | |||||||||||||||||||||| |||| ||||||| || |||||    
T  44461597 attattcttttaaaatgtcaaagtttttaatttttaatgca-taattacacaaattttcataaaaatttactatttaaaatctttaac 44461683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 32787351 - 32787261
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaa 124  Q
    ||||||||||||||| | ||||||||||| ||||| ||||||| | ||| || |  |||||||||||||| |||||||||||| |||||||    
T  32787351 taaattaagtaattaatctttaaaaatgttaaagtgttcaattcctaatacattttattacacaaatttttataaaaagttactatttaaa 32787261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 31398519 - 31398418
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| | |||||||||| |||||||||||| ||||||| ||| |||| |||||  |||| ||  |||||| ||||||| ||||||| |||| ||||    
T  31398519 tctttaagtagactaaattaaataattatttttttaaaatgtgaaattttttaatttataatgtaccaattacataaatttttataaaaaattactattt 31398420  T
Q  122 aa 123  Q
    ||    
T  31398419 aa 31398418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 45753482 - 45753551
Alignment:
Q  56 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    ||||||||||||  ||||||||| ||||||| |||||||||||||||||| ||||  ||| |||||||||    
T  45753482 aaaaatgtcaaatatttcaattttcaatgcattgattacacaaattttcaaaaaacattatcatttaaag 45753551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 24075110 - 24075214
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||| ||||  || ||||||||||||||||| || ||||| |||||||| | |||| | ||||||||| |||| |||| ||||||||||| |||||    
T  24075110 taaattaaataatatttctttaaaaatgtcaaagtgtttaattttcaatgcactttattatataaattttcaaaaaatgttatcatttaaagtctttaac 24075209  T
Q  134 tagtg 138  Q
     ||||    
T  24075210 cagtg 24075214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 40377067 - 40377159
Alignment:
Q  49 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 141  Q
    ||||| |||||| ||||||  |||  ||| ||||| || ||||||||||| ||||||| | || ||||||||||||| |||||||||||||||    
T  40377067 attttataaaaaagtcaaatattttgattcccaattcattgattacacaacttttcatgataaattaccatttaaaggccttaactagtgccc 40377159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 5115691 - 5115612
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||||| || |||||| || |||  ||||||||||||||||| | ||||||||||||| || ||||| ||||||||||||    
T  5115691 aattatgttataaaaaagttaaatatttcaatttccaatgcattaattacacaaatttacaaaaaaatttaccatttaaa 5115612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 33744243 - 33744156
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    |||||||||||  |||| |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||| |  ||||||||||    
T  33744243 tctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattgattacatattttttcataaa 33744156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 4521121 - 4521043
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 95  Q
    |||| |||||||||||||||||  |||  |||||| |||||||| || |||  ||||||||||||||||| ||||||||    
T  4521121 ggcactctttaagcatactaaaacaagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 4521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 27934837 - 27934747
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaa 111  Q
    ||||||||||| ||||||||| |||||||| ||||||||| |||||  ||||||||| |||| | | | |||||||||| ||| |||||||    
T  27934837 tctttaagcattctaaattaaataattattatttaaaaatatcaaaagtttcaattttcaatacaatttattacacaaacttttataaaaa 27934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 30350978 - 30350911
Alignment:
Q  69 ttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtg 138  Q
    |||||||||| ||||||| ||||||||| || |||||||||  |||||||||||| ||| ||||||||||    
T  30350978 ttttcaattttcaatgcattgattacactaactttcataaa--gttaccatttaaggtctttaactagtg 30350911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 36321738 - 36321612
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||||| |||  ||||||||||| |||| ||| || |||  |||| |||||||||||| ||||||||   ||||| ||||| | || |    
T  36321738 ggcactctttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattacatgtatttttataaatacttgc 36321639  T
Q  117 catttaaagtccttaactagtgcccca 143  Q
     ||||| |||||||||  |||||||||    
T  36321638 tatttatagtccttaaagagtgcccca 36321612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 39807557 - 39807643
Alignment:
Q  58 aaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 143  Q
    |||||| ||| |||||||||| |||||||||  |||||| ||| |||| ||||||| | ||||| |||||| |||||||||||||||    
T  39807557 aaatgttaaaattttcaattttcaatgcactttattacataaactttcgtaaaaagctgccattgaaagtctttaactagtgcccca 39807643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 5423858 - 5423753
Alignment:
Q  18 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 117  Q
    |||||||||||||||  |||||||   ||||||| |||||||| || |||   |||||||| ||||||| | | |||| || |||||||||||| |||||    
T  5423858 gcattctttaagcattttaaattagaaaattattctttaaaaaagttaaatagttcaattttcaatgcattaaatacataagttttcataaaaaattacc 5423759  T
Q  118 atttaa 123  Q
    ||||||    
T  5423758 atttaa 5423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 25302103 - 25302172
Alignment:
Q  55 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||||| ||||||| |||| |||| |||| || |||||||||| |||||||| | |||||||||||||||    
T  25302103 taaaaaagtcaaagatttcgattttcaatacattgattacacatattttcatgataagttaccatttaaa 25302172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 47364098 - 47364049
Alignment:
Q  75 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||||||    
T  47364098 atttctaatgaactgattacacaaattttcataaaaatttatcatttaaa 47364049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 50974659 - 50974562
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||||||| |||||| ||||||  ||||||||| | ||||| | |||||| | |||||||| | || |||||||||||||  |||||| ||||||||    
T  50974659 aattattttataaaaaagtcaaatatttcaattttcgatgcattaattacatatattttcatgataaattaccatttaaaggtcttaacgagtgcccc 50974562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 37037640 - 37037720
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 97  Q
    ||||||||||||||||  ||||   ||||||||||||| ||||| || |||  |||||||||||||| || ||||||||||    
T  37037640 ggcattctttaagcattttaaaaatagtaattatttttaaaaaaagttaaatgtttcaatttccaatacattgattacaca 37037720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 44442261 - 44442349
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    ||||||| | ||||||| |||||||| ||||||  ||||||||| |||| || | | |||||| ||||| |||||||||||| ||||||    
T  44442261 taaattaggaaattattctttaaaaaagtcaaatatttcaattttcaatacattaaatacacatatttttataaaaagttactatttaa 44442349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 4220739 - 4220636
Alignment:
Q  20 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccat 119  Q
    |||||||||||||   |||||| | ||||||||||||| || ||||||  ||| |||||| ||  || |||||| ||||| ||||||| ||| |||||||    
T  4220739 attctttaagcatttcaaattatgaaattattttttaagaaagtcaaatattttaatttctaacacattgattatacaaaatttcatagaaacttaccat 4220640  T
Q  120 ttaa 123  Q
    ||||    
T  4220639 ttaa 4220636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 14758572 - 14758667
Alignment:
Q  37 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||| |||||||  ||||||| ||  ||  ||||||||| | ||||| ||| | ||||| |||||||||||| |||| |||||||||||||||    
T  14758572 aattaagaaattattccttaaaaaagtttaacatttcaattttcgatgcattgaatgcacaatttttcataaaaatttactatttaaagtccttaa 14758667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 31745492 - 31745397
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 140  Q
    ||||||||| ||| || ||||||  |||| |||  | ||||| |||||||||| ||||| || | ||||||| |||||||| ||||||||||||||    
T  31745492 aattattttataataaagtcaaatatttcgattctcgatgcattgattacacatatttttatgataagttactatttaaaggccttaactagtgcc 31745397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 34596180 - 34596125
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    |||| |||| ||||||| |||||||||| | ||||||||||||||| |||||||||    
T  34596180 tttcgattttcaatgcattgattacacataatttcataaaaagttatcatttaaag 34596125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 43216382 - 43216299
Alignment:
Q  40 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    |||||||||||||||| |||||| |||| ||| ||||||  |||| |||| |||||| || ||||||||||  |||| ||||||    
T  43216382 taagtaattattttttgaaaatgacaaattttccaatttttaatgaactggttacactaactttcataaaagtttactatttaa 43216299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 9590913 - 9590967
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||| |||| ||||| | |||||||||| |||||||||||| |||||||||||||    
T  9590913 tttcgatttacaatgtattgattacacacattttcataaaatgttaccatttaaa 9590967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 44719239 - 44719297
Alignment:
Q  82 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 140  Q
    ||||| |||||||||| |||||||| | || |||||||||||||  |||||||||||||    
T  44719239 atgcaatgattacacacattttcatgataaattaccatttaaagctcttaactagtgcc 44719297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 5251009 - 5250920
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||| |||||||||||| | | ||||| |||||||| ||||||   || ||||| ||||| | | | ||||||||||||||||||||    
T  5251009 tctttaaacatactaaattaggaagttattctttaaaaaagtcaaacagtttaattttcaatgtattaaatacacaaattttcataaaaa 5250920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 7750463 - 7750532
Alignment:
Q  56 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    ||||| ||||||  ||||||||||||||||| | |||| | || |||||| ||||||||||| |||||||    
T  7750463 aaaaaagtcaaatgtttcaatttccaatgcattaattatataacttttcaaaaaaagttaccttttaaag 7750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 8791530 - 8791485
Alignment:
Q  40 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgc 85  Q
    |||||||||| | ||||||||||| |||||||||||||| ||||||    
T  8791530 taagtaattagtctttaaaaatgtaaaagttttcaattttcaatgc 8791485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 18038940 - 18039001
Alignment:
Q  71 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||  || ||||||| ||||    
T  18038940 ttcaatttccgatgcattgaatacacaaattttcataaaaaattattatctaaagtctttaa 18039001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 19533280 - 19533321
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaat 76  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||    
T  19533280 taaattaagcaattattttttaaaaatatcaaacttttcaat 19533321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 38320636 - 38320538
Alignment:
Q  38 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta-cacaaattttcataaaaagttaccatttaaagtccttaactag 136  Q
    |||||||||||||| ||||||| | | ||| ||||| ||||| || |||||  ||| |||| ||||| ||||||||||||||||| ||||  ||||||||    
T  38320636 attaagtaattattctttaaaattattaaaattttcgatttctaaagcact--ttatcacacattttaataaaaagttaccatttgaagtttttaactag 38320539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 39988065 - 39988000
Alignment:
Q  267 aatgaaattctagtctttcccccatttctatggagacctattccttctcgaattggaatagttatc 332  Q
    ||||||||||||||||| | |  ||||||  |||||  |||||||||||||||||||||| |||||    
T  39988065 aatgaaattctagtcttcctctaatttcttaggagagatattccttctcgaattggaataattatc 39988000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 37621614 - 37621678
Alignment:
Q  267 aatgaaattctagtctttcccccatttctatggagacctattccttctcgaattggaatagttat 331  Q
    ||||||||||||||||| | |  ||||||  |||||  |||||||||||||||||||||| ||||    
T  37621614 aatgaaattctagtcttcctctaatttcttaggagagatattccttctcgaattggaataattat 37621678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 42564262 - 42564298
Alignment:
Q  88 tgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  42564262 tgataacacaaattttcaaaaaaagttaccatttaaa 42564298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 50222688 - 50222612
Alignment:
Q  49 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    ||||| ||||||  |||||  ||| ||||| ||||||| |||||||||  ||||||||||||| |||| ||||||||    
T  50222688 attttataaaaaaatcaaatattttaattttcaatgcattgattacacttattttcataaaaaattactatttaaag 50222612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 8237945 - 8238068
Alignment:
Q  19 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacca 118  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  8237945 cattatttaagtatactaaattaagtaattattctttaaaaatgtcaaagttttcatttttcaatgcactgattacacaaactttcataaaaagttacca 8238044  T
Q  119 tttaaagtccttaactagtgcccc 142  Q
    ||||| ||||||||||| ||||||    
T  8238045 tttaaggtccttaactaatgcccc 8238068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 19619993 - 19620101
Alignment:
Q  25 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||     
T  19619993 ttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaatttccaatgcactgattatacaacttttcataaaaagttactatttaag 19620092  T
Q  125 gtccttaac 133  Q
    | |||||||    
T  19620093 gcccttaac 19620101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 34299849 - 34299731
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    ||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||    
T  34299849 tttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcactgattacacaaactttcataaaaagttactatttaa 34299750  T
Q  124 agtccttaactagtgcccc 142  Q
     ||||||||| | ||||||    
T  34299749 ggtccttaaccaatgcccc 34299731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 5907817 - 5907941
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| |||||||||||||||||||||| ||| ||||||| ||||  |||||||||||||| ||||||| |||||||||||||  ||||    
T  5907817 ggcactctttaagcattctaaattaagtaattatttttttaaa-tgtcaaacttttttatttccaatgcactaattacactaattttcataaaagtttac 5907915  T
Q  117 catttaaagtccttaactagtgcccc 142  Q
     |||||||||||||||||||||||||    
T  5907916 tatttaaagtccttaactagtgcccc 5907941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 5482503 - 5482395
Alignment:
Q  34 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||    
T  5482503 ctaaattaagtaattattcttttaaaatgtcaaagttttca-tttccaatgcattggttacacaaaatttcataaaaagttacaatttaaagtccttaac 5482405  T
Q  134 tagtgcccca 143  Q
      ||||||||    
T  5482404 ccgtgcccca 5482395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 43492310 - 43492189
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 120  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||| ||| ||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  43492310 tctttaagcattctaaattaagtaattattctttagaaatgtcaaaatttacaatttccaatgcactttattacacaaactttaataaaaagttaccatt 43492211  T
Q  121 taaagtccttaactagtgcccc 142  Q
    ||||  ||||||  ||||||||    
T  43492210 taaatcccttaatcagtgcccc 43492189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 44452150 - 44452038
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 120  Q
    ||||||| ||| |||||||||||||||||| ||||||||| |||||  |||||||||||||||||| | |||||||||| ||||||||||| |||| |||    
T  44452150 tctttaaacattctaaattaagtaattattatttaaaaatatcaaaagtttcaatttccaatgcactttattacacaaactttcataaaaaattactatt 44452051  T
Q  121 taaagtccttaac 133  Q
    ||||||| |||||    
T  44452050 taaagtcattaac 44452038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 24299237 - 24299146
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||||||||  ||||||||| |||||||  |||||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||||||    
T  24299237 tttaagcatgttaaattaagaaattattccttaaaaatgtcaaattttttaatttccaatgcactgattatacaacttttcataaaaagtta 24299146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 24610947 - 24610826
Alignment:
Q  21 ttctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 120  Q
    |||||||| ||| |||||||||  ||||||| ||| ||||||| |||||||| |||||| ||| |||| |||||||||| ||| ||||||| ||| ||||    
T  24610947 ttctttaaacatgctaaattaaacaattattcttttaaaatgttaaagttttgaatttctaattcactaattacacaaacttttataaaaaattatcatt 24610848  T
Q  121 taaagtccttaactagtgcccc 142  Q
    |||||||||||||  |||||||    
T  24610847 taaagtccttaacccgtgcccc 24610826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 3267718 - 3267598
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||| ||||||||||| ||| ||||| | ||||||||| |||| ||||||||| |||||||||| ||| ||||||| || | ||||    
T  3267718 tctttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttccattttcaatgcactcattacacaaacttttataaaaacttgctattt 3267619  T
Q  122 aaagtccttaactagtgcccc 142  Q
     | ||||||||| ||||||||    
T  3267618 taggtccttaaccagtgcccc 3267598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 41150121 - 41150034
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||||||||  ||||||||||||||||| ||||||| ||| |||| ||||||||  |||||||||||||| |||||||||||||||||    
T  41150121 tttaagcatcataaattaagtaattattctttaaaagtgttaaagatttcaattcacaatgcactgattatacaaattttcataaaaa 41150034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 25037076 - 25036962
Alignment:
Q  19 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttacc 117  Q
    |||| |||||||||  ||||||||||||||||| |||||||| |||||| |||| ||||| |||||||| | ||| |||||| ||||||| ||||||||     
T  25037076 cattttttaagcattttaaattaagtaattattatttaaaaaggtcaaaatttttaattttcaatgcactttattgcacaaactttcatagaaagttaca 25036977  T
Q  118 atttaaagtccttaa 132  Q
    ||||||| |||||||    
T  25036976 atttaaaatccttaa 25036962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 39316401 - 39316297
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||||||| ||||||||||||||||| || || ||||||||| ||||||||||  | || |||| ||||||||  |||||||||||||||  ||||    
T  39316401 tctttaagcatattaaattaagtaattattcttcaataatgtcaaaattttcaatttttactgtactggttacacaagctttcataaaaagttataattt 39316302  T
Q  122 aaagt 126  Q
    |||||    
T  39316301 aaagt 39316297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 26871771 - 26871890
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    ||||||||| |||||| ||||||||||| ||| ||||| | |||||||| ||||| || |  |||||||||||||| ||| ||||||| |||| ||||||    
T  26871771 tttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttgaattttcattatactgattacacaaacttttataaaaaattactatttaa 26871870  T
Q  124 agtccttaactagtgcccca 143  Q
     ||||||||| ||| |||||    
T  26871871 ggtccttaaccagtacccca 26871890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 34681685 - 34681791
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| |||||||| | |||||||||||| ||| ||||||   |||||||||||||||| | | ||||||| |||| ||||||||||||    
T  34681685 ggcagtctttaagcattctaaattaggaaattattttttacaaaagtcaaatagttcaatttccaatgcattaaatacacaagtttttataaaaagttac 34681784  T
Q  117 catttaa 123  Q
     ||||||    
T  34681785 tatttaa 34681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 23682559 - 23682444
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| ||| ||||||||| |||||||||||| |||||||||||||||| ||||| |||| || |||| | ||||| ||| ||||||||||||| |||    
T  23682559 tctttaaacattctaaattaaataattatttttt-aaaatgtcaaagtttttaattttcaat-caatgataagacaaacttttataaaaagttacccttt 23682462  T
Q  122 -aaagtccttaactagtg 138  Q
     ||||||||||| |||||    
T  23682461 aaaagtccttaattagtg 23682444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 39241570 - 39241687
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 122  Q
    |||||||||  ||||||||| ||||||| ||||||||||||| |  |||||||||||||||| |||||||| || |  ||||||||||  |||||||||     
T  39241570 tttaagcattataaattaagcaattattctttaaaaatgtcataccttttcaatttccaatggactgattatactagctttcataaaagtttaccatttt 39241669  T
Q  123 aagtccttaactagtgcc 140  Q
    | ||||||||| ||||||    
T  39241670 aggtccttaaccagtgcc 39241687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 7432656 - 7432743
Alignment:
Q  44 taattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtcctt 130  Q
    |||||||| ||||||||| | |||||||| ||||| |||||||||  ||| |||||| ||| ||||||||||||||||||||||||||    
T  7432656 taattattatttaaaaatattaaagtttttaattttcaatgcactttattgcacaaacttttataaaaagttaccatttaaagtcctt 7432743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 38988717 - 38988816
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaat-tttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||||||| ||||||||| ||||| ||||| || |||||||||||||| | |||||| |||| ||| ||||||||||| |||||||||| |||||    
T  38988717 taaattaagtaataattttttaataatgttaaagtgtttaatttccaatgcactttattacataaatattttataaaaagttatcatttaaagtgcttaa 38988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 18926320 - 18926425
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| |||||||||||  ||||| | | ||||||| |||||||| || |||   |||||||| ||||||| ||| ||||||| |||||||||||||||||    
T  18926320 ggcactctttaagcattttaaatcatgaaattattctttaaaaaggtgaaatagttcaattttcaatgcattgaatacacaacttttcataaaaagttac 18926419  T
Q  117 cattta 122  Q
    ||||||    
T  18926420 cattta 18926425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 31498737 - 31498660
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 99  Q
    ||||||| ||| ||||||||||||| |||||||| ||||||| |||||||||||||| |||| || ||||| ||||||    
T  31498737 tctttaaacattctaaattaagtaaatatttttttaaaatgttaaagttttcaattttcaatacattgattgcacaaa 31498660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 46716177 - 46716266
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||| ||| ||||||||| |||||||| ||||||||| |||||||||||||| | ||||||| | |||| ||||| ||| |||||||    
T  46716177 tctttaaccattctaaattaaataattattctttaaaaatatcaaagttttcaatgttcaatgcattaattatacaaacttttataaaaa 46716266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 10032029 - 10031909
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| | ||| | |||||||||||||| |||| || |||  |||| |||||||||||| ||||||||||  |||||||||| |  ||| ||||    
T  10032029 tctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgattacacactttttcataaatacatactattt 10031930  T
Q  122 aaagtccttaactagtgcccc 142  Q
    | |||||||||  ||||||||    
T  10031929 atagtccttaaagagtgcccc 10031909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 38452192 - 38452283
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 136  Q
    ||||||||| |||||| ||||||  ||||||||||| ||||| || ||||||| |||||||||| || ||| | ||||||| ||||||||||    
T  38452192 aattattttataaaaaagtcaaatatttcaatttccgatgcattggttacacatattttcataataaattatcttttaaaggccttaactag 38452283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 26872891 - 26872781
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccattta 122  Q
    ||||||||| |||||| ||||||||||| |||| |||| |||||  |||||||||||||||||  | |||| ||||| ||||| ||||| |||  |||||    
T  26872891 tttaagcattctaaatcaagtaattattatttataaatatcaaaagtttcaatttccaatgcattttattatacaaactttcacaaaaaattattattta 26872792  T
Q  123 aagtccttaac 133  Q
    ||||| |||||    
T  26872791 aagtctttaac 26872781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 35395904 - 35395962
Alignment:
Q  20 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaattt 78  Q
    |||||||||| || ||| |||||||||||||||||||||||| |||||||||| |||||    
T  35395904 attctttaagtattctatattaagtaattattttttaaaaatatcaaagtttttaattt 35395962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 47507603 - 47507713
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| |||||||| || |||||  ||| ||| ||||| ||||||  |||||| ||||||||||| ||| | ||||||||||  ||||||| | |||||||    
T  47507603 ggcactctttaaggattctaaaagaagaaataattttataaaaaaatcaaagatttcaatttccgatgtattgattacacattttttcatgagaagttac 47507702  T
Q  117 catttaaagtc 127  Q
    |||||||||||    
T  47507703 catttaaagtc 47507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 3256740 - 3256648
Alignment:
Q  18 gcattctttaagcatactaaattaagtaattattttttaaaaat-gtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    |||||||||||||||   ||| |||| ||||||| ||||||||  ||||||  |||| |||||||||||||||| |||||| |||||||||||    
T  3256740 gcattctttaagcatttcaaaataagcaattattctttaaaaaaagtcaaatgtttcgatttccaatgcactgaatacacatattttcataaa 3256648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 9097802 - 9097683
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||||||||  |||  |||||||||  |||||  |||||  ||||||||||||||||| | | |||||| ||||||||||| | |||||| ||    
T  9097802 tctttaagcatactaatataaacaattattttaaaaaaaa-tcaaatatttcaatttccaatgcaattaatacacacattttcataaatacttaccactt 9097704  T
Q  122 aaagtccttaactagtgcccc 142  Q
      |||| ||||||||||||||    
T  9097703 gtagtctttaactagtgcccc 9097683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 32699395 - 32699447
Alignment:
Q  63 tcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||||||    
T  32699395 tcaaaattttcaatttcaaatgcactgattgcacaaactttcataaaaagtta 32699447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 41431199 - 41431099
Alignment:
Q  22 tctttaagcatactaaattaagtaattatttttt-aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 120  Q
    |||||||||||  ||||||||| ||||||||||| |||||  | |||  |||||||||| |||| | ||||||| || ||||||||||||| ||||||||    
T  41431199 tctttaagcattttaaattaagaaattatttttttaaaaaaattaaatatttcaatttctaatgtattgattactcatattttcataaaaacttaccatt 41431100  T
Q  121 t 121  Q
    |    
T  41431099 t 41431099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 1360534 - 1360609
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 97  Q
    ||||||||||| | ||| | ||||||||||||||||||| || |||  |||| |||||||||||| ||||||||||    
T  1360534 tctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattgattacaca 1360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 27123267 - 27123393
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttc-ataaaaagtta 115  Q
    |||| ||||||||||| | ||||| |||||| ||| ||| |||| |||||   || |||||||||||||| | | ||||||| |||||  |||||| |||    
T  27123267 ggcactctttaagcatcccaaatttagtaatcattcttttaaaaagtcaactattacaatttccaatgcattaagtacacaacttttcgttaaaaactta 27123366  T
Q  116 ccatttaaagtccttaactagtgcccc 142  Q
    ||||||||||| |||||  ||||||||    
T  27123367 ccatttaaagtgcttaaagagtgcccc 27123393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 33887960 - 33887887
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 95  Q
    ||||||||||| | ||| ||| |||||||| |||||||| ||||||  ||||||||| ||||||| ||||||||    
T  33887960 tctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcattgattaca 33887887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 35496681 - 35496576
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatt 120  Q
    ||||||||||| | ||||| ||||| ||| |||| |||| |||||   || |||||| ||||||| | ||||||||| |||||| |||||| ||||||||    
T  35496681 tctttaagcatccaaaatttagtaactatatttttaaaaagtcaactattacaattttcaatgcattcattacacaatttttcattaaaaacttaccatt 35496582  T
Q  121 taaagt 126  Q
    ||||||    
T  35496581 taaagt 35496576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 35599910 - 35599817
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    ||||||| |||||||||||| | ||||||| ||||||||  |||||   ||||| || ||||||| ||| |||| || ||||||||||||||||    
T  35599910 tctttaaacatactaaattaggaaattattctttaaaaaattcaaatagttcaaatttcaatgcattgaatacataacttttcataaaaagtta 35599817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 47305567 - 47305514
Alignment:
Q  89 gattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||||||| |||||||| | |||||||||||||||  ||||||||||||||||    
T  47305567 gattacacatattttcatgataagttaccatttaaacaccttaactagtgcccc 47305514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 48837977 - 48838025
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 84  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  48837977 taaattaaataattatttt-taaaaatatcaaagttttcaatttccaatg 48838025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 31902839 - 31902747
Alignment:
Q  40 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||| |||||||  |||| || ||||||  ||||||||| |||| || ||| ||||||| ||| |||||||| |||| |||||||||||||||    
T  31902839 taagaaattattccttaagaaagtcaaatatttcaattttcaatacattgactacacaattttccataaaaatttactatttaaagtccttaa 31902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 6392179 - 6392237
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttcc 80  Q
    ||||||||||| |||||||||| ||||||| ||| ||||  | ||||||||||||||||    
T  6392179 tctttaagcattctaaattaagaaattattctttcaaaacttaaaagttttcaatttcc 6392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 8170052 - 8170150
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 143  Q
    ||||||||| |||||| ||||||  |||  |||||| || || |||||| ||| || ||||| | |||||||  ||||||| |||||||||||||||||    
T  8170052 aattattttataaaaaagtcaaatattttgatttccgatacattgattatacatatgttcatgataagttactttttaaagaccttaactagtgcccca 8170150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 10453485 - 10453539
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 99  Q
    ||||||| ||||||||| | ||| |||||||||| ||||||| ||||||||||||    
T  10453485 aattattctttaaaaatattaaaattttcaattttcaatgcattgattacacaaa 10453539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 34398159 - 34398074
Alignment:
Q  46 attattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||||||||| ||||||   |||||||| ||||||| |||  ||||||||||| || |||| ||| ||||||||||| ||||    
T  34398159 attattttttaaaaaggtcaaatacttcaattttcaatgcattgaaaacacaaatttttat-aaaatttatcatttaaagtctttaa 34398074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 8327909 - 8327824
Alignment:
Q  50 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 135  Q
    ||||||||||| |||||||  ||||||||||||| || | | |||||||| ||| ||||||  ||||||||| | || ||||||||    
T  8327909 ttttttaaaaaagtcaaagacttcaatttccaatacaataaatacacaaacttttataaaatcttaccattttatgtgcttaacta 8327824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 17883398 - 17883317
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 126  Q
    |||||||||||||||| ||||||   || ||||||||| ||| ||||| || ||||||| | ||||| |||| |||||||||    
T  17883398 aattattttttaaaaaagtcaaaaactttaatttccaacgcattgatttcataaattttgacaaaaacttactatttaaagt 17883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 40722382 - 40722459
Alignment:
Q  47 ttattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    ||||| ||||| || ||||||  ||||||||| ||||||| | ||||||||||||  |||||||| |||| |||||||    
T  40722382 ttattctttaagaaagtcaaatatttcaattttcaatgcattaattacacaaattaccataaaaacttactatttaaa 40722459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 25176401 - 25176329
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg 89  Q
    |||| ||||||| |||  |||||||  |||||||| ||| ||||||||||| |||||||||||  ||||||||    
T  25176401 ggcactctttaaacatgttaaattagataattattcttttaaaatgtcaaatttttcaatttctgatgcactg 25176329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 26239652 - 26239544
Alignment:
Q  19 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttacc 117  Q
    |||| |||||| |||||||||| || ||||||| ||| |||| || || ||||  | ||||||||||| ||| || |||| |||||| |||||| ||||     
T  26239652 cattttttaaggatactaaatttagcaattattctttcaaaaagttaacgtttatagtttccaatgcattgaatatacaatttttcattaaaaacttact 26239553  T
Q  118 atttaaagt 126  Q
    |||||||||    
T  26239552 atttaaagt 26239544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 35567135 - 35567215
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaa 124  Q
    |||||||||||||||| ||||||  ||| |||||||||| || | | |||||| ||||| || ||||||||| ||||||||    
T  35567135 aattattttttaaaaaagtcaaatattttaatttccaatacattaaatacacatatttttataaaaaagttatcatttaaa 35567215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 37352484 - 37352436
Alignment:
Q  57 aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca 105  Q
    |||| ||||||  ||||||||||||||||| | ||||||||||||||||    
T  37352484 aaaaagtcaaatatttcaatttccaatgcattaattacacaaattttca 37352436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 12002260 - 12002385
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12002260 ggcactctttaagtatactaaattaagtaattattctttaaaaatgtaaaagttttcaatttccaatgcactgattacacaaatttttataaaaagttac 12002359  T
Q  117 catttaaagtccttaactagtgcccc 142  Q
     ||||||  |||||||| ||||||||    
T  12002360 tatttaagatccttaaccagtgcccc 12002385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 1876595 - 1876479
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1876595 ggcactctttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcactgattacacaaactttcataaaaaattac 1876496  T
Q  117 catttaaagtccttaac 133  Q
    |||||||||||||||||    
T  1876495 catttaaagtccttaac 1876479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 14016980 - 14016855
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| |||||| ||||||| ||| ||| ||||| | ||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  14016980 ggcactctttaagcatgctaaataaagtaatgattctttcaaaatttaaaagttttcaatttccaatgcactgatcacacaaacttttataaaaaattac 14016881  T
Q  117 catttaaagtccttaactagtgcccc 142  Q
     |||||| ||||||||||||||||||    
T  14016880 tatttaaggtccttaactagtgcccc 14016855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 11533230 - 11533345
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| |||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||| |||||||||    
T  11533230 tctttaaacatgttaaattaataaattattctttaaaaatgtcaaagttttcaatttccaatgcactgaaggcacaaactttcataaaaaattaccattt 11533329  T
Q  122 aaagtccttaactagt 137  Q
    || | |||||||||||    
T  11533330 aaggcccttaactagt 11533345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 44220814 - 44220716
Alignment:
Q  26 taagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  44220814 taagcatgttaaattaagtaattattcttttaaaatgtcaaagttttcaatttccaatgcactcattacacaaacgtccataaaaatttaccatttaaa 44220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 31844331 - 31844214
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtta 115  Q
    |||| |||||||  || ||||||||||||||||||  ||||||| ||||||||||| |||||||||||||| | |||| ||||| |||||||||||||||    
T  31844331 ggcactctttaaatattctaaattaagtaattattccttaaaaaagtcaaagttttgaatttccaatgcacttcattatacaaactttcataaaaagtta 31844232  T
Q  116 ccatttaaagtccttaac 133  Q
    | ||||||||||||||||    
T  31844231 ctatttaaagtccttaac 31844214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 32271170 - 32271278
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    |||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||| ||| || |||||||||||| || ||||||||| ||||||||||    
T  32271170 tttaagcattttaaattaagaaattattttttaaaaatgttaaagttttcaatttctaattcattgattacacaaacttccataaaaagataccatttaa 32271269  T
Q  124 agtccttaa 132  Q
     ||| ||||    
T  32271270 tgtctttaa 32271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 36907841 - 36907918
Alignment:
Q  65 aaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||    
T  36907841 aaagttttcaatttccaatgcaatgattacacaaacttttataaaaagttactatttaaagtccttagctagtgcccc 36907918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 39594597 - 39594477
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || |||||||||| ||||||| |||| |||| |||||||||||||||| || | ||||||||| ||||| ||||||||||||||| |||||    
T  39594597 tctttaagaatgctaaattaagaaattattctttataaatatcaaagttttcaattttcattacactgattatacaaactttcataaaaagttatcattt 39594498  T
Q  122 aaagtccttaactagtgcccc 142  Q
    ||  |||||||| | ||||||    
T  39594497 aagatccttaaccaatgcccc 39594477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 40629062 - 40628964
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||||||||||||  |||||||||| |||||||| |||||||||| ||||||||||||||| ||| ||||||  |||| |||||| |||||||||    
T  40629062 taaattaagtaattattcattaaaaatgttaaagtttttaatttccaattcactgattacacaaacttttataaaagattactatttaaggtccttaac 40628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 38019526 - 38019418
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||||||| ||||||| ||||||| | | |||||||||||| || ||||||| ||||||||| | |||||||||| ||||||||||    
T  38019526 tctttaagcatgctaaattaagaaattattctttaaaatttttaaagttttcaatctctaatgcac-gattacacatactttcataaaatgttaccattt 38019428  T
Q  122 aaagtcctta 131  Q
    || |||||||    
T  38019427 aatgtcctta 38019418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 44907218 - 44907318
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 122  Q
    ||||||| | ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| || |||| || ||||||||||| |||| |||||    
T  44907218 tttaagctttctaaattaagtaattattttttaaaaatgtcaaactttttcaattttcaatgcactaataacactaactttcataaaaatttactattta 44907317  T
Q  123 a 123  Q
    |    
T  44907318 a 44907318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 7627955 - 7627844
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| |||  |||||||||||||||||||| |||||||| |||||||| |||||| ||| ||||||| ||||||| ||||||||||| ||||  |||    
T  7627955 tctttaaacatgttaaattaagtaattatttttaaaaaatgtgaaagtttttaatttctaatacactgatcacacaaactttcataaaaaattacttttt 7627856  T
Q  122 aaagtccttaac 133  Q
    | |||| |||||    
T  7627855 atagtcattaac 7627844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 38047718 - 38047607
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 120  Q
    ||||||||||| ||||||||||||||| || |||| ||||||||||  ||| |||||  ||||||||  |||||||||| ||||||| ||||||| ||||    
T  38047718 tctttaagcattctaaattaagtaatttttctttataaatgtcaaaaattttaatttttaatgcactttattacacaaactttcatataaagttatcatt 38047619  T
Q  121 taaagtccttaa 132  Q
    ||||||||||||    
T  38047618 taaagtccttaa 38047607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 2376836 - 2376726
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||||||  |||||||| |||||||| ||||||||| ||||||||||||||||| || | | | |||| | ||| |||||||||||||||| ||||    
T  2376836 tctttaagcattttaaattaaataattattctttaaaaatatcaaagttttcaatttctaacgtattaattatataaactttcataaaaagttactattt 2376737  T
Q  122 aaagtccttaa 132  Q
    || ||||||||    
T  2376736 aaggtccttaa 2376726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 20522943 - 20523031
Alignment:
Q  23 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||||||||| |||| ||||||||||||| ||| ||||| | |||||||||||||| ||||||||| |||||| ||| |||||||||||    
T  20522943 ctttaagcatgctaagttaagtaattattctttcaaaatttaaaagttttcaattttcaatgcactaattacataaactttcataaaaa 20523031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 37449531 - 37449626
Alignment:
Q  15 gtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 110  Q
    ||||||||| |||| |||  ||||||||||||||||||||| ||||||||||| |||||||||| |||| |||| ||||| | || ||||||||||    
T  37449531 gtggcattccttaaacattttaaattaagtaattatttttttaaaatgtcaaacttttcaattttcaatacactaattacgctaactttcataaaa 37449626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 1773915 - 1773799
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt--caatttccaatgcactgattacacaaattttcataaaaagtt 114  Q
    |||| ||||||||| | ||||||||||| |||||||||||||| ||||||| ||||  |||||||||||||||| ||| |||  | ||||||||||  ||    
T  1773915 ggcagtctttaagctttctaaattaagttattattttttaaaa-tgtcaaacttttttcaatttccaatgcactaattgcacttactttcataaaagttt 1773817  T
Q  115 accatttaaagtccttaa 132  Q
    || |||||||||||||||    
T  1773816 actatttaaagtccttaa 1773799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 41960083 - 41959969
Alignment:
Q  29 gcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtc 127  Q
    |||| ||| ||| |||||||||| ||||||||||| |||||||| |  ||||||||||||  |||| ||||| ||||||||||| ||| |||||||||||    
T  41960083 gcattctacatttagtaattattctttaaaaatgttaaagttttaagcttccaatgcactttattatacaaactttcataaaaaattatcatttaaagtc 41959984  T
Q  128 cttaactagtgcccc 142  Q
    |||||| ||| ||||    
T  41959983 cttaaccagtacccc 41959969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 1445242 - 1445137
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 120  Q
    ||||||||| | ||||||||||||||   | ||||| ||||||||||| |||||||| |||||||| | |||||||||| ||| | ||||||||||||||    
T  1445242 tctttaagctttctaaattaagtaatatctctttaataatgtcaaagtgttcaattttcaatgcactttattacacaaacttttagaaaaagttaccatt 1445143  T
Q  121 taaagt 126  Q
    ||||||    
T  1445142 taaagt 1445137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 31264985 - 31265094
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||||| ||||||||||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||||    
T  31264985 cctgtggcactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacaattcaatttccaatgtattaaatacacaagttttcataaaaa 31265084  T
Q  112 gttaccattt 121  Q
    ||||| ||||    
T  31265085 gttactattt 31265094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 18842363 - 18842275
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 110  Q
    ||||||| |||  ||||||||||||||||| |||||||||||||||||||| |||||  |||| | |||||||||||| ||| ||||||    
T  18842363 tctttaaccattttaaattaagtaattattctttaaaaatgtcaaagtttttaatttttaatgtattgattacacaaacttttataaaa 18842275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 30486620 - 30486728
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtccttaac 133  Q
    ||||| ||||||||||| ||| ||||| | |||||||| |||||  ||||||||||||||||||| ||| || ||||| |||| ||||||||||||||||    
T  30486620 taaataaagtaattattcttttaaaatttaaaagtttttaatttataatgcactgattacacaaacttttataaaaaaattactatttaaagtccttaac 30486719  T
Q  134 tagtgcccc 142  Q
     ||| ||||    
T  30486720 cagtacccc 30486728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 39691222 - 39691112
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| | | |||||  ||||||| |||||||| ||||||   |||||||| ||||||| ||| |||||||||||||||||||| |||| ||||    
T  39691222 tctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaatacacaaattttcataaaaaattactattt 39691123  T
Q  122 aaagtccttaa 132  Q
    ||  |||||||    
T  39691122 aagatccttaa 39691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 4278957 - 4279057
Alignment:
Q  40 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 139  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| |||  |||||||||| |||||  ||||  |||||| |||| |||||| |||||||    
T  4278957 taagtaattattttataaaaatgataaagttttcaatttccaatacac-cattacacaaactttcaccaaaaagtaccatctaaaatccttacctagtgc 4279055  T
Q  140 cc 141  Q
    ||    
T  4279056 cc 4279057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 5020160 - 5020051
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || |||||  ||| ||| ||||| |||||| ||||||| ||||||||||| || || |||||||||  |||||||| | ||||||||||||    
T  5020160 tctttaaggattctaaaagaagaaataattttataaaaaagtcaaagatttcaatttccgatacattgattacac--attttcatgacaagttaccattt 5020063  T
Q  122 aaagtccttaac 133  Q
    |||| |||||||    
T  5020062 aaaggccttaac 5020051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 24869402 - 24869497
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa-ttttcataaaa 110  Q
    ||||||||| ||||||| ||| |||||||||||||||||| | |||||||     | |||||||||||||||||||| |||||| ||| |||||||||||    
T  24869402 cctgtggcactctttaaacatgctaaattaagtaattattctctaaaaat-----atttttcaatttccaatgcactaattacataaacttttcataaaa 24869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 35501176 - 35501064
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 120  Q
    ||||||| ||| ||| ||| |||||||| | ||| ||||| | |||||||| |||||||||||||| | |||||||||| ||| ||||||| |||  |||    
T  35501176 tctttaaacattctacatttagtaattaatctttgaaaatattaaagtttttaatttccaatgcactttattacacaaacttttataaaaatttaatatt 35501077  T
Q  121 taaagtccttaac 133  Q
    |||||||||||||    
T  35501076 taaagtccttaac 35501064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 35592455 - 35592539
Alignment:
Q  40 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||| ||||||||  |||||| ||||||  ||||||||||||| ||| |||| | |||||||| |||||||||||||||||||||    
T  35592455 taagaaattatttcgtaaaaaagtcaaatatttcaatttccaaggcaatgatcagacaaatttccataaaaagttaccatttaaa 35592539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 14453699 - 14453794
Alignment:
Q  42 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 139  Q
    ||||||||||   |||||||||||||||||| ||||| |||||||| | |||||||||||||||| ||||  ||| ||||||||||| |||||||||||    
T  14453699 agtaattattccataaaaatgtcaaagtttttaattttcaatgcactttattacacaaattttcacaaaa--tta-catttaaagtctttaactagtgc 14453794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 34722837 - 34722774
Alignment:
Q  71 ttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||| |||||||||  |||| ||||| |||||||||||||||||||||||||||||||||    
T  34722837 ttcaattttcaatgcactttattatacaaactttcataaaaagttaccatttaaagtccttaac 34722774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 30158170 - 30158108
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 84  Q
    ||||||||||| ||||||||| |||||||| ||| ||||||| |||||||| |||||||||||    
T  30158170 tctttaagcattctaaattaaataattattctttgaaaatgtaaaagtttttaatttccaatg 30158108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 37564440 - 37564346
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||| ||| |||||||||| ||||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||| |||||    
T  37564440 tctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtattaaatacacaagttttcataaaaggttac 37564346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 9629925 - 9629833
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||| | |||| |||||||||||||||| |||||||| ||| |||| |||||| ||||||| ||||||||  |||||||||||||| ||||    
T  9629925 tttaagctttctaatttaagtaattattttt-aaaaatgtaaaactttttcaattttcaatgcattgattacattaattttcataaaaatttac 9629833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 12782775 - 12782888
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||||||||| || | ||||||| |||||||| ||  ||  |||| |||||||||||| | |  ||||| ||||||||||| | |||||| ||    
T  12782775 tctttaagcatactaaaatatgcaattattctttaaaaaagttgaatatttcgatttccaatgcaattaacacacacattttcataaatatttaccactt 12782874  T
Q  122 aaagtccttaacta 135  Q
    | ||||||||||||    
T  12782875 atagtccttaacta 12782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 26014833 - 26014752
Alignment:
Q  51 tttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||| |||||||| ||  ||||||| |||||||||||||||||||||||  || |||||||||||| |||||  ||||||||    
T  26014833 ttttgaaaaatgttaatattttcaagttccaatgcactgattacacaaacatttataaaaagttactatttatggtccttaa 26014752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 42636479 - 42636363
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 115  Q
    |||| ||||||||||| | ||||| |||||||||| || ||||| |||||   || |||||| ||||||| | | ||||||| |||||| |||||| |||    
T  42636479 ggcactctttaagcatcccaaatttagtaattattattcaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaactta 42636380  T
Q  116 ccatttaaagtccttaa 132  Q
    ||||||||||| |||||    
T  42636379 ccatttaaagtgcttaa 42636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 9005010 - 9005043
Alignment:
Q  34 ctaaattaagtaattattttttaaaaatgtcaaa 67  Q
    ||||||||||||||||||||||||||||||||||    
T  9005010 ctaaattaagtaattattttttaaaaatgtcaaa 9005043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 27506079 - 27505979
Alignment:
Q  31 atactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctt 130  Q
    |||||||||||||  |||||||||| |||| || |||  ||||||||| ||||||||| ||||||||| ||||  |||||| |||| |||||| ||| ||    
T  27506079 atactaaattaagatattatttttttaaaa-gtgaaatatttcaattttcaatgcactaattacacaattttttgtaaaaatttacaatttaaggtcatt 27505981  T
Q  131 aa 132  Q
    ||    
T  27505980 aa 27505979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 37813516 - 37813423
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    |||| |||||||| || | ||||| |||||||||| ||||||||| |||||   || |||||||||||||| ||| ||||||| ||||||||||    
T  37813516 ggcactctttaaggatcccaaatttagtaattattcttttaaaaaagtcaaccattacaatttccaatgcattgaatacacaacttttcataaa 37813423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 43419827 - 43419730
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||| |||| |||||||||||||||| || |||  ||| |||||  ||| || | |||| ||||||||||||||||| ||| |||||||||| |||||    
T  43419827 taaaataagaaattattttttaaaaaagttaaatattttaatttgtaatacatttattatacaaattttcataaaaacttaacatttaaagtacttaa 43419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 43841043 - 43841124
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||||||||| ||||||||| | ||| ||||||||||  |||  | |||||||||||||||| | ||||| ||||    
T  43841043 taaattaagtaattattctttaaaaatattaaatttttcaatttttaatatattgattacacaaatttttacaaaaaattac 43841124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 24103159 - 24103087
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattac 94  Q
    ||||||||||| ||||| |||| ||||||||||| |||| ||||||  |||| |||||| ||||| |||||||    
T  24103159 tctttaagcattctaaaataagaaattatttttttaaaaggtcaaatgtttcgatttccgatgcaatgattac 24103087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 34336581 - 34336477
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || || ||| ||| ||||||| |||||||| ||||||   |||||||||||||||| ||||| || ||| ||| | ||||| |||| ||||    
T  34336581 tctttaaggattcttaataaagaaattattctttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaactttgacaaaaacttactattt 34336482  T
Q  122 aaagt 126  Q
    |||||    
T  34336481 aaagt 34336477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 41106092 - 41105996
Alignment:
Q  36 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||||||| ||||| |  ||||||| ||||||   |||||||| ||||||| ||| | ||||| ||||| |||||| ||||||||||| ||||||||    
T  41106092 aaattaagaaattaatcattaaaaaagtcaaatagttcaattttcaatgcattgaattcacaatttttcgtaaaaacttaccatttaaggtccttaa 41105996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 42801078 - 42801162
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataa 108  Q
    |||||| || ||||| |||||||||||| |||| ||| | ||||  ||||||||| ||||||| | |||||||| ||||||||||    
T  42801078 tttaagtattctaaaataagtaattattctttacaaaaggcaaatatttcaattttcaatgcattaattacacacattttcataa 42801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 7931765 - 7931812
Alignment:
Q  74 aatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||| ||||| | |||||||||||||||||| |||||||||||||||    
T  7931765 aattttcaatgtattgattacacaaattttcaaaaaaagttaccattt 7931812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 45368808 - 45368729
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    ||||||||| |||||| || |||  ||||||||| | ||||| |||||| ||| |||||||| | |||||||||||||||    
T  45368808 aattattttataaaaaagttaaatatttcaattttcgatgcaatgattatacatattttcatgataagttaccatttaaa 45368729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 33636716 - 33636810
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||| |||||   || ||||||||  |||||| ||||||  ||||||||||||||||| | |||||| ||  ||||| ||||||||||    
T  33636716 tctttaagcattctaaaaggagaaattatttcataaaaaagtcaaatgtttcaatttccaatgcaataattacaaaatatttcaaaaaaagttac 33636810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 32133735 - 32133686
Alignment:
Q  90 attacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 139  Q
    |||||||||| ||||||||||| |||| ||||||| |||||||| |||||    
T  32133735 attacacaaactttcataaaaaattactatttaaattccttaaccagtgc 32133686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 41385258 - 41385351
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 110  Q
    |||||||||||||||  | ||| |||| |||||||  |||| || |||| |  ||||||||| ||||| | |||||||||||||||||| ||||    
T  41385258 ggcattctttaagcaatccaaaataagaaattattccttaagaaagtcagatgtttcaattttcaatgtattgattacacaaattttcacaaaa 41385351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 42022701 - 42022640
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaat 83  Q
    |||||||||||  ||||||||  |||||||||||||||| ||||||   |||||||||||||    
T  42022701 tctttaagcattttaaattaaaaaattattttttaaaaaagtcaaatagttcaatttccaat 42022640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 44960519 - 44960580
Alignment:
Q  80 caatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 141  Q
    ||||||| |||||||| ||||||||||||||| |||| ||| ||||| |||||  |||||||    
T  44960519 caatgcattgattacataaattttcataaaaatttactattaaaagtgcttaaagagtgccc 44960580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 6270334 - 6270418
Alignment:
Q  40 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||| ||||||||  ||||| |||||||  ||||||||| ||||  | | |||||||||||||| |||||||  |||||||||||    
T  6270334 taagaaattatttcataaaactgtcaaatatttcaattttcaatatattaattacacaaatttttataaaaaaataccatttaaa 6270418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 33013043 - 33013163
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa-aagttaccatt 120  Q
    ||||||||||||| ||||| |  ||||||| ||| |||| |||||   || |||||||||||| ||| | ||||||| |||||||||| || |||| | |    
T  33013043 tctttaagcataccaaatttaacaattattcttttaaaaagtcaactattacaatttccaatgtactcaatacacaacttttcataaagaacttactaat 33013142  T
Q  121 taaagtccttaactagtgccc 141  Q
    |||||| |||||  |||||||    
T  33013143 taaagtgcttaaagagtgccc 33013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 33285963 - 33285923
Alignment:
Q  92 tacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||| |||||||||||| |||| |||||||||||||||    
T  33285963 tacacaatttttcataaaaatttactatttaaagtccttaa 33285923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 33949658 - 33949571
Alignment:
Q  22 tctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    |||||||||||| |||||| ||||| |||| |||||||||| ||||   || ||||||| |||||||| | ||||||| ||||||||||    
T  33949658 tctttaagcatattaaatttagtaagtattgttttaaaaat-tcaactattacaatttcaaatgcactcaatacacaacttttcataaa 33949571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 44254203 - 44254131
Alignment:
Q  54 ttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 126  Q
    ||||||| ||||||   |||||||||||||||| ||||| || ||||||| | ||||| |||| |||||||||    
T  44254203 ttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaattttgacaaaaacttactatttaaagt 44254131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 8e-40; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 53261556 - 53261675
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||| ||| |||||||||||| ||||    
T  53261556 tctttaagcatgctaaattaagtaattattctttaaaaatttaaaagttttcaatttccaatgcagtgattacacaaacttttataaaaagttactattt 53261655  T
Q  122 aaagtccttaactagtgccc 141  Q
    |||||||||||| |||||||    
T  53261656 aaagtccttaacgagtgccc 53261675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 40252654 - 40252773
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| |||| |||||||||||||| || ||||||||||| |||||||||||||| |||| || ||||||||| || ||||||||||| |||| ||||    
T  40252654 tctttaaacatattaaattaagtaattgttatttaaaaatgttaaagttttcaattttcaatacattgattacac-aactttcataaaaatttactattt 40252752  T
Q  122 aaagtccttaactagtgcccc 142  Q
    |||||||||||| ||||||||    
T  40252753 aaagtccttaaccagtgcccc 40252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 49951798 - 49951717
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaatttt 103  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  49951798 tctttaagcatgctaaattaagtaattattcttttaaaatgtcaaagttttcaattttcaatgcaccgattacacaaatttt 49951717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 53622301 - 53622421
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 120  Q
    ||||||| |||  |||||||||||||| |||||| ||||||||||| |||||||||||||   ||||  |||||||||||||||| ||||||||| ||||    
T  53622301 tctttaaacatcttaaattaagtaattttttttttaaaatgtcaaaattttcaatttccagctcactttattacacaaattttcagaaaaagttatcatt 53622400  T
Q  121 taaagtccttaactagtgccc 141  Q
    |||||| ||||||||||||||    
T  53622401 taaagttcttaactagtgccc 53622421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 36876167 - 36876064
Alignment:
Q  20 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccat 119  Q
    ||||||||||||| ||||||||||||| |||| ||| ||||||| || |||||||||||||||| || |||||||||||| ||| ||||||||||||||     
T  36876167 attctttaagcatgctaaattaagtaactattcttttaaaatgtaaatgttttcaatttccaatacattgattacacaaacttttataaaaagttaccac 36876068  T
Q  120 ttaa 123  Q
    ||||    
T  36876067 ttaa 36876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 37461585 - 37461460
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcata-aaaagtta 115  Q
    |||| ||||||| ||| ||||||||||||||||  |||||||| ||||||||||||||||||  ||||||| ||||||||||| ||||||| |||| |||    
T  37461585 ggcactctttaaacatgctaaattaagtaattaaattttaaaa-tgtcaaagttttcaatttttaatgcaccgattacacaaactttcataaaaaaatta 37461487  T
Q  116 ccatttaaagtccttaactagtgcccc 142  Q
    ||||||| | |||||||||| ||||||    
T  37461486 ccatttataatccttaactaatgcccc 37461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 45743309 - 45743414
Alignment:
Q  18 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 117  Q
    ||||| |||||| ||  ||||||||| ||||||| |||||||||||||||||||||||||| |||| || ||||||||||| |||||||||| ||||||     
T  45743309 gcattttttaagtatgttaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatacagtgattacacaacttttcataaagagttact 45743408  T
Q  118 atttaa 123  Q
    ||||||    
T  45743409 atttaa 45743414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 52650798 - 52650697
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| ||| |||||||||| ||||||| |||| |||||||||| |||||||||| |||| |||||||||||||| |||||||||||| |||| ||||    
T  52650798 tctttaaacatgctaaattaagaaattattctttacaaatgtcaaaattttcaattttcaattcactgattacacaatttttcataaaaaattactattt 52650699  T
Q  122 aa 123  Q
    ||    
T  52650698 aa 52650697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 3179113 - 3179003
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 122  Q
    |||||| || |||||| ||||||||| |||||||||| || ||||||||||||||||||| ||| | |||||||||| |||||||||||||||| |||||    
T  3179113 tttaagtattctaaatcaagtaattaatttttaaaaaagttaaagttttcaatttccaatacactttattacacaaactttcataaaaagttactattta 3179014  T
Q  123 aagtccttaac 133  Q
     |||| |||||    
T  3179013 tagtctttaac 3179003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 31262914 - 31263014
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||  |||| ||||| |||||||| ||| ||||||||||  |||||    
T  31262914 tctttaagcattctaaattaagtaattatttt-taaaaatgtcaaagttttcgattttgaatgtactgactacacaaacttttataaaaagttgtcattt 31263012  T
Q  122 aa 123  Q
    ||    
T  31263013 aa 31263014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 47937861 - 47937962
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||| | |||| ||| || |||||| ||||||||||| ||| |||||    
T  47937861 tctttaaacatactaaattatgtaattattctttaaaaaagtcaaagttttcaattttctatgctctgtttgcacaaactttcataaaaaattatcattt 47937960  T
Q  122 aa 123  Q
    ||    
T  47937961 aa 47937962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 49795138 - 49795254
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagtta 115  Q
    |||| |||||||||||||||||| |||||||||||||||  |||| | ||| |||||||||| |||||||| ||||||||||| ||| || ||||| |||    
T  49795138 ggcactctttaagcatactaaataaagtaattatttttt-taaatttaaaaattttcaattttcaatgcaccgattacacaaacttttataaaaaaatta 49795236  T
Q  116 ccatttaaagtccttaac 133  Q
    | ||||||||||||||||    
T  49795237 ctatttaaagtccttaac 49795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 38354577 - 38354473
Alignment:
Q  35 taaattaagtaattatttttt-aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||| || ||| ||||||  ||||||||||| ||| ||| |    
T  38354577 taaattaagtaattatttttttaaaaatgtcaaacttttcaatttctaatacactgattacactaactttaataaaagtttaccatttaaggtctttagc 38354478  T
Q  134 tagtg 138  Q
    |||||    
T  38354477 tagtg 38354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 17970803 - 17970917
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||| |||||||||||  |||||||||||||||||  || ||||| |||||| ||||||||||||||||||||||||||   || ||| || ||||||||    
T  17970803 ggcactctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattac---aactttaatgaaaagtta 17970899  T
Q  116 ccatttaaagtccttaac 133  Q
    |||||||||||| |||||    
T  17970900 ccatttaaagtctttaac 17970917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 18939967 - 18939846
Alignment:
Q  31 atactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctt 130  Q
    ||||||||||||||||||||| ||||||||  | ||| ||||||||||  |||| | |  || |||||| ||| ||||||||||| | ||||| ||||||    
T  18939967 atactaaattaagtaattattctttaaaaaaattaaaattttcaatttttaatgtatttgttgcacaaacttttataaaaagttatcttttaaggtcctt 18939868  T
Q  131 aactagtgccccatttcccata 152  Q
    |||||||||| |||||||||||    
T  18939867 aactagtgccgcatttcccata 18939846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 23136612 - 23136539
Alignment:
Q  25 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaa 98  Q
    ||||| ||| ||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||    
T  23136612 ttaagtatattaaattaagtaattattcttttaaaatttaaaagttttcaatttccaatgcactgattacacaa 23136539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 41370262 - 41370166
Alignment:
Q  36 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||||||| |||||||| | ||||| || |||  ||||||||| ||||||| |||||||||||||||||||||||| |||| ||| |||||||||||    
T  41370262 aaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattgattacacaaattttcataaaaacttactattcaaagtccttaa 41370166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 50617494 - 50617606
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||| ||| || |||||| |||| | | |||||    
T  50617494 tctttaaacattataaattaagtaattatttttttaaaatgtcaaacttttcaatttttaatgcactgattgcactaactttcatcaaaattgatcattt 50617593  T
Q  122 aaagtccttaact 134  Q
    || || |||||||    
T  50617594 aaggttcttaact 50617606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 4391968 - 4392067
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagt-tttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 122  Q
    |||||| || ||||||| |||||||||| |||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||||| ||| ||||||    
T  4391968 tttaagtattctaaatttagtaattattctttaaaaatgtcaaaaaatttcaattttcaatacactgattacacaaatttttataaaaatttatcattta 4392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 35153262 - 35153369
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||| | |||||| ||||||||||| |||||||||||||| |||||||| | ||| |||||| ||| |||||||||||| |||||||||| |||      
T  35153262 taaattaaatcattattctttaaaaatgttaaagttttcaattttcaatgcactttattgcacaaacttttataaaaagttactatttaaagtctttatt 35153361  T
Q  134 tagtgccc 141  Q
    ||||||||    
T  35153362 tagtgccc 35153369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 32175431 - 32175550
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatt 120  Q
    |||||||||||  |||||||||||||||||   ||||| |||||  ||||||||||| ||||| |||  ||| |||||| ||||| ||||||||| ||||    
T  32175431 tctttaagcattttaaattaagtaattattccataaaagtgtca--gttttcaattttcaatgtactttattgcacaaactttcacaaaaagttatcatt 32175528  T
Q  121 taaagtccttaactagtgcccc 142  Q
    ||||||| ||||||||||||||    
T  32175529 taaagtctttaactagtgcccc 32175550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 25042837 - 25042743
Alignment:
Q  23 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||||| ||||||||||||    || ||||||||||| ||| ||||||||||| |||| |||||||||||||| ||| ||||||||||| |||||    
T  25042837 ctttaagcatgctaaattaagta----ttctttaaaaatgttaaaattttcaatttctaatgtactgattacacaaacttttataaaaagttaacattt 25042743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 21687699 - 21687591
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagtta 115  Q
    |||| ||||||||| | |||| |||||||||  || ||||| ||| ||||||| |||||||| |||||||||  |||||||||| ||| |||||||||||    
T  21687699 ggcactctttaagctttctaagttaagtaatatttctttaataatatcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagtta 21687600  T
Q  116 ccatttaaa 124  Q
    |||||||||    
T  21687599 ccatttaaa 21687591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 22889253 - 22889377
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||| | | ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||   |||| | || ||||||||||  |||     
T  22889253 ggcactctttaaactttctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttat 22889352  T
Q  117 catttaaagtccttaactagtgccc 141  Q
    ||||||| ||| ||||| |||||||    
T  22889353 catttaaggtcattaacgagtgccc 22889377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 22940917 - 22941041
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||| | | ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||   |||| | || ||||||||||  |||     
T  22940917 ggcactctttaaactttctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttat 22941016  T
Q  117 catttaaagtccttaactagtgccc 141  Q
    ||||||| ||| ||||| |||||||    
T  22941017 catttaaggtcattaacgagtgccc 22941041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 20022234 - 20022309
Alignment:
Q  68 gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 143  Q
    ||||||||||||||||||| |||||  ||||| ||||||||||| |||| |||||| ||||||||| |||||||||    
T  20022234 gttttcaatttccaatgcattgattgtacaaactttcataaaaaattactatttaaggtccttaaccagtgcccca 20022309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 2063473 - 2063567
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | |||||||||||||||||||||||||    
T  2063473 tctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaaattttcataaaaagttac 2063567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 49446667 - 49446581
Alignment:
Q  56 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||| ||||||  |||| |||||| ||||| |||||||||| |||||||| | ||||||| |||||||| ||||||||||||||||    
T  49446667 aaaaaagtcaaatatttcgatttccgatgcattgattacacatattttcatgataagttactatttaaaggccttaactagtgcccc 49446581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 8297864 - 8297980
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 115  Q
    |||| ||||||||||| | ||||| |||||||||| ||| ||||||||||   || |||||||||||||| | | ||||||| |||||| |||||| |||    
T  8297864 ggcactctttaagcatcccaaatttagtaattattcttttaaaatgtcaactgttacaatttccaatgcattcaatacacaatttttcattaaaaactta 8297963  T
Q  116 ccatttaaagtccttaa 132  Q
    | ||||||||| |||||    
T  8297964 ctatttaaagtgcttaa 8297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 21241120 - 21241191
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcact 88  Q
    |||| ||||||| |||  ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||    
T  21241120 ggcactctttaaacatgttaaattaagaaatgattttttaaaaatatcaaaattttcaatttccaatgcact 21241191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 39767212 - 39767323
Alignment:
Q  29 gcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtc 127  Q
    |||| |||||| ||||||||||||||| |||||   |||||||| ||||||||||||| | |||||||||| ||| || ||||| |||| |||| | |||    
T  39767212 gcatgctaaataaagtaattattttttcaaaattaaaaagtttttaatttccaatgcattaattacacaaacttttataaaaaaattactatttgaggtc 39767311  T
Q  128 cttaactagtgc 139  Q
    |||||| |||||    
T  39767312 cttaaccagtgc 39767323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 44570185 - 44570122
Alignment:
Q  49 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaag 112  Q
    ||||||||||||||| ||| |||| ||||| ||||||| |||||||||||| ||||||||||||    
T  44570185 attttttaaaaatgttaaattttttaattttcaatgcattgattacacaaactttcataaaaag 44570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 49623052 - 49622961
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtt 114  Q
    |||||||||  |||||||||||||||||   ||||||||||||| ||||||||||| |||  || | |||||||||||||||| ||||||||    
T  49623052 tttaagcattttaaattaagtaattattccataaaaatgtcaaaattttcaatttctaatatactttattacacaaattttcacaaaaagtt 49622961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 7996722 - 7996816
Alignment:
Q  34 ctaaattaagtaattatttttta-aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||| ||||||||||||  ||||| | |||||||| |||||||||||     |||||||||| ||||||||||| |||  |||||||||||||||    
T  7996722 ctaaattaaataattattttttttaaaattttaaagtttttaatttccaatg-----attacacaaactttcataaaaaattattatttaaagtccttaa 7996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 19597256 - 19597165
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    ||||||||| ||| |||| | ||||||| |||||||||||||||   ||||||||| |||||| ||| |||| ||||||| |||||| ||||    
T  19597256 tttaagcattctacattaggaaattattctttaaaaatgtcaaatagttcaatttctaatgcattgaatacataaatttttataaaatgtta 19597165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 36721660 - 36721589
Alignment:
Q  56 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtc 127  Q
    ||||| ||||||  ||||||||  ||||||| ||||||||||||||| |||||||| |||| ||||||||||    
T  36721660 aaaaaagtcaaatatttcaattctcaatgcattgattacacaaatttccataaaaacttactatttaaagtc 36721589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 49421969 - 49421882
Alignment:
Q  56 aaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    |||||||| ||||||||||||||||||||||| | |||  ||||  ||| |||||  |||  ||||||||||||||||||||||||||    
T  49421969 aaaaatgttaaagttttcaatttccaatgcactttattgtacaagcttttataaatcgttgtcatttaaagtccttaactagtgcccc 49421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 12618802 - 12618713
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||||||| | ||||| || ||||||||||| |||| |||||| ||| | |||||| |||||| |||||| |||||||||||||||||    
T  12618802 tctttaagcattccaaatttagaaattatttttttaaaaagtcaaatgttataaatttc-aatgcattgattatacaaattttcataaaaa 12618713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 39724175 - 39724055
Alignment:
Q  24 tttaagcatactaaattaagtaattatttt--ttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 120  Q
    |||||| || ||||||||||||| ||| ||  ||| ||||||||||||||||||||| ||||  || | |||| ||||| ||| ||||||  ||||||||    
T  39724175 tttaagtattctaaattaagtaaatatattagttagaaatgtcaaagttttcaatttacaatatactttattatacaaacttttataaaatattaccatt 39724076  T
Q  121 taaagtccttaactagtgccc 141  Q
    |||||| |||||  |||||||    
T  39724075 taaagttcttaataagtgccc 39724055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 20390018 - 20390138
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||||| || | |||  ||| ||| ||||| |||||| ||||||  |||  |||| | ||||| |||| |||||| ||||||| | |||||||    
T  20390018 ggcattctttaagaattccaaaacaagaaataattttataaaaaagtcaaatattttgattttcgatgcattgatcacacaacttttcatgataagttac 20390117  T
Q  117 catttaaagtccttaactagt 137  Q
    ||||||||  |||||||||||    
T  20390118 catttaaaagccttaactagt 20390138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 23016335 - 23016231
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||| ||||| | |||||||| ||||||| |||||| | ||||||  ||||||||||||||||| ||| |||| | | ||| ||||||| |||     
T  23016335 ggcactctttgagcattccaaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattgaatacatagacttttataaaaacttaa 23016236  T
Q  117 cattt 121  Q
    |||||    
T  23016235 cattt 23016231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 23614626 - 23614729
Alignment:
Q  34 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||| ||||||||||||||||| || |||| ||||||||| |||| ||| | |||||| ||| ||| ||||||  ||| | ||||||||| ||||    
T  23614626 ctaaattaaataattattttttaaaaacgttaaag-tttcaattttcaatacactttattacataaacttttataaaatattatcgtttaaagtctttaa 23614724  T
Q  133 ctagt 137  Q
    |||||    
T  23614725 ctagt 23614729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 25115371 - 25115267
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || | ||||| |||||||||| ||| |||| || ||   || |||||||||||||| ||| ||||||| |||| ||||||| |||| ||||    
T  25115371 tctttaagaatccaaaatttagtaattattattttaaaaagttaactattacaatttccaatgcagtgaatacacaactttttataaaaacttactattt 25115272  T
Q  122 aaagt 126  Q
    |||||    
T  25115271 aaagt 25115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 44690376 - 44690284
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    |||| ||||||| ||||||||| ||||||||||| ||||||||| || |||  |||| |||| ||||| | | |||||| | |||||||||||    
T  44690376 ggcactctttaaacatactaaaataagtaattatcttttaaaaaagttaaatatttcgattttcaatgtaataattacatatattttcataaa 44690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 14949069 - 14949006
Alignment:
Q  48 tattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||| |||||||| ||||||  || ||| || ||||||| ||||||||||||||||||||||||    
T  14949069 tattctttaaaaaagtcaaatgttacaaatttcaatgcattgattacacaaattttcataaaaa 14949006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 24369405 - 24369476
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 93  Q
    ||||||| ||||||||| |||  ||||||| |||| ||| ||||||  ||||||||||||| ||||||||||    
T  24369405 tctttaaacatactaaaataaacaattattctttataaaagtcaaacatttcaatttccaaagcactgatta 24369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 37179689 - 37179760
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 93  Q
    ||||||||||||| |||  |||||||||||||||| ||| ||||||  |||| |||||||||| | ||||||    
T  37179689 tctttaagcataccaaaacaagtaattattttttagaaaagtcaaacatttcgatttccaatgtattgatta 37179760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 41468142 - 41468201
Alignment:
Q  82 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 141  Q
    ||||| ||||||||   ||||| || |||||||||||||||||| |||||||||||||||    
T  41468142 atgcattgattacatgtatttttatgaaaagttaccatttaaaggccttaactagtgccc 41468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 48097952 - 48098051
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    |||||| || |||||||||| ||||||| |||||||| || |||   ||||||||||||| || | | ||||||  |||| |||||||||||| ||||||    
T  48097952 tttaagtattctaaattaagaaattattctttaaaaaagttaaatagttcaatttccaatacattaaatacacatgtttttataaaaagttactatttaa 48098051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 1696248 - 1696194
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    ||||||||||| ||||| |||||||| | ||||||| |||||||||| |||||||    
T  1696248 tttcaatttccgatgcattgattacatacattttcaaaaaaagttactatttaaa 1696194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 24546816 - 24546722
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||||||||||  ||||||| | ||||||| ||||||||  ||||    |||||||||||||| | | | |||||||||||||||||||| ||||    
T  24546816 tctttaagcatgttaaattaggaaattattctttaaaaaattcaagcagttcaatttccaatgtattaaatacacaaattttcataaaaaattac 24546722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 38949118 - 38949048
Alignment:
Q  71 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 141  Q
    |||||||||| ||||| ||| | ||||| |||||||||||| |||| |||| ||||||||||  |||||||    
T  38949118 ttcaatttccgatgcattgaatgcacaatttttcataaaaatttactatttcaagtccttaaagagtgccc 38949048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 40173586 - 40173524
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 84  Q
    ||||||| ||| |||||||||||||| |||  |||||||||| |||||||| ||||| |||||    
T  40173586 tctttaaacattctaaattaagtaatcattcattaaaaatgttaaagtttttaattttcaatg 40173524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 41956490 - 41956428
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||| ||| ||| ||||||||||| |||||||||||| |||| ||| |||| ||||||    
T  41956490 tttcaattttcaacgcattgattacacaatttttcataaaaatttactattaaaagcccttaa 41956428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 50115068 - 50115145
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    ||||||||| |||||| ||||||| |||| |||||| ||||| |||||||||| ||| | ||||   ||||||||||||||    
T  50115068 aattattttataaaaaagtcaaagatttcgatttcctatgcattgattacacatattatgataa---gttaccatttaaag 50115145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 31295885 - 31295930
Alignment:
Q  165 tagttagtagttttatggagttaggaaatggtggttaataaactac 210  Q
    ||||| |||||||||||||||||| ||||||||||| | |||||||    
T  31295885 tagttcgtagttttatggagttagaaaatggtggtttagaaactac 31295930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 41394078 - 41394013
Alignment:
Q  35 taaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 99  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||| |||||  | ||||||||||    
T  41394078 taaattaagtaattattatttaaaaaaagttaaagttttcaatttctaatgcgttaattacacaaa 41394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 51105943 - 51106020
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 122  Q
    ||||||| |||||||| ||||||  ||| ||||| |||| ||| |||||| || ||||||||||| |||||| |||||    
T  51105943 aattattatttaaaaaagtcaaatattttaattttcaatacacggattacgcatattttcataaatagttactattta 51106020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 51834912 - 51835017
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatt 120  Q
    ||||||||||| ||||||| || ||||||| ||| |||| |||||   ||  ||||||||||||| | | ||||||| |||||| |||||| |||| |||    
T  51834912 tctttaagcatcctaaatttagcaattattcttttaaaaagtcaactattataatttccaatgcattaaatacacaacttttcattaaaaatttactatt 51835011  T
Q  121 taaagt 126  Q
    ||||||    
T  51835012 taaagt 51835017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 2818357 - 2818421
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca 86  Q
    |||||||||||  ||||||||| ||||||| ||| |||| ||||||   ||||||||||||||||    
T  2818357 tctttaagcattttaaattaagaaattattcttttaaaaggtcaaaaagttcaatttccaatgca 2818421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 7628005 - 7628077
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    |||||||||||||| || || ||||| || |||||| ||||||||||| |||||||  |||||  ||||||||    
T  7628005 tttcaatttccaatacattggttacataacttttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 7628077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 21240662 - 21240706
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaat 61  Q
    |||||||||||| ||| |||||||||| ||||||| |||||||||    
T  21240662 ggcattctttaaacatgctaaattaagaaattattatttaaaaat 21240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 24753978 - 24754030
Alignment:
Q  74 aatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 126  Q
    ||||||||||||| ||||| || ||| ||||||||||| |||| |||||||||    
T  24753978 aatttccaatgcattgatttcataaactttcataaaaatttactatttaaagt 24754030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 27748438 - 27748526
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 110  Q
    ||||||| ||| ||||| |||||||||||||||||||| | |  || |||||||||| ||||  |  |||||||| || ||||||||||    
T  27748438 tctttaaacattctaaactaagtaattattttttaaaagtatttaacttttcaattttcaatatatcgattacactaactttcataaaa 27748526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 32055454 - 32055338
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||| ||||||||||||| |||  ||| ||||||| |||| ||| ||||||  ||||| |||||||||||| ||||||||   ||||| ||||| | ||     
T  32055454 ggcactctttaagcatacaaaaacaagcaattattctttagaaaagtcaaacattttcgatttccaatgcattgattacatgtatttttataaatacttg 32055355  T
Q  116 ccatttaaagtccttaa 132  Q
    | ||||| |||||||||    
T  32055354 ctatttatagtccttaa 32055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 42901983 - 42902027
Alignment:
Q  72 tcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||| |||  |||||||||| |||||||||||||||||    
T  42901983 tcaatttccaaagcatagattacacaacttttcataaaaagttac 42902027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 42957080 - 42956992
Alignment:
Q  22 tctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    ||||||| ||| ||||| |||| | ||||| |||||||||  |||||  ||||||||||||||||| | |||||||| ||||| |||||    
T  42957080 tctttaaacattctaaaataagcagttattattttaaaaaaatcaaatatttcaatttccaatgcattaattacacacatttttataaa 42956992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 44647941 - 44647869
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||||||||| ||||| | |||||||| |||||||| | ||||||| ||| |||| ||||||  ||||||||    
T  44647941 tttcaatttccgatgcattaattacacatattttcatgataagttactattcaaaggccttaatcagtgcccc 44647869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 29716871 - 29716752
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 122  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||    
T  29716871 tttaagcattctaaattcagcaattatttttttaaaatgtcaaagttttcaatttccaatgcactttattacacaaactttcataaaaggttaccattta 29716772  T
Q  123 aagtccttaactagtgcccc 142  Q
    ||||||||||| ||||||||    
T  29716771 aagtccttaaccagtgcccc 29716752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 10364754 - 10364854
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 134  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| || || ||||||||||| |||| |||||| ||||||||||    
T  10364754 taaattaagtaattattctttaaaaatatcaaagttttcaatttacaatgcactgattatacgaactttcataaaaatttactatttaaggtccttaact 10364853  T
Q  135 a 135  Q
    |    
T  10364854 a 10364854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 33619328 - 33619252
Alignment:
Q  154 ttatatatagttagttagtagttttatggagttaggaaatggtggttaataaactacctcttctactatataaatat 230  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33619328 ttatatatgggtagttagtagttttatggagttaggaaatggtggttaagaaactacctcttctactatataaatat 33619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 23344569 - 23344690
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 120  Q
    ||||||||| | ||||||||||||||  || |||| |||||||||||| ||||||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  23344569 tctttaagctttctaaattaagtaatatttctttacaaatgtcaaagtgttcaatttccaatgcactttattacacaaacttttataaaaagttaccatt 23344668  T
Q  121 taaagtccttaactagtgcccc 142  Q
    |||||| | |||| ||||||||    
T  23344669 taaagtgcataaccagtgcccc 23344690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 13445839 - 13445745
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||||| || ||||| || ||||||| ||||||||||| ||||    
T  13445839 tctttaagcatgctaaattaagtaagtattctttaaaaatgtgaaagttttcaatttcaaaagcactaatcacacaaactttcataaaaaattac 13445745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 5704665 - 5704549
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatt 120  Q
    ||||||| ||| |||||||||||||||||||||| |||||||   |||||||||||| ||||| | |||||||| ||| |||||| ||||| |||  |||    
T  5704665 tctttaaacatgctaaattaagtaattatttttttaaaatgt--tagttttcaattttcaatgtattgattacataaactttcataaaaaaattattatt 5704568  T
Q  121 taaagtccttaactagtgc 139  Q
    ||||||| ||||| |||||    
T  5704567 taaagtctttaacaagtgc 5704549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 21130707 - 21130816
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttc-aatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||| ||| |||||||||| ||||||||||| ||||  ||||| |||| |||| ||| ||| || ||||||||||  |||| |||||| |||||||||    
T  21130707 taaatttagttattatttttttaaaatgtcaaacttttttaattttcaatacactaattgcaccaactttcataaaagtttactatttaaggtccttaac 21130806  T
Q  134 tagtgcccca 143  Q
    ||||||||||    
T  21130807 tagtgcccca 21130816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 27752644 - 27752759
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaa-tttccaatgcac-tgattacacaaatttt---cataaaaagttac 116  Q
    ||||||| ||| |||||||||||||||||||| || |||||||||||||||||| |||| ||||||| | |||||||||| |||    | |||||||||     
T  27752644 tctttaaacattctaaattaagtaattattttatacaaatgtcaaagttttcaattttctaatgcactttattacacaaactttaaaaaaaaaaagttat 27752743  T
Q  117 catttaaagtccttaa 132  Q
     |||||||||||||||    
T  27752744 tatttaaagtccttaa 27752759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 34552407 - 34552311
Alignment:
Q  46 attattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcat-aaaaagttaccatttaaagtccttaactagtgccc 141  Q
    |||||| ||||||||| | ||||||||||||||||||||||| | ||||||| || |||||| ||||||||  ||||||||||||||||| |||||||    
T  34552407 attattctttaaaaatattaaagttttcaatttccaatgcactttattacac-aactttcataaaaaagttgtcatttaaagtccttaacgagtgccc 34552311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 6586535 - 6586424
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||| |||| |||||||||||||||||||| | ||||| | ||| |||| |||| |   |||||||||| ||||| |||  ||| |||||||||||||||    
T  6586535 cctggggcactctttaagcatactaaattaggaaattaatctttgaaaaagtcagatagttcaatttccgatgcattgaaaacataaattttcataaaaa 6586436  T
Q  112 gttaccatttaa 123  Q
    ||||| ||||||    
T  6586435 gttactatttaa 6586424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 10429739 - 10429845
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 134  Q
    ||||| ||||||||||||||||||| |||  || |||||||||| || |||| |||||||| ||| ||||||||||| |||| || |||   ||||||||    
T  10429739 taaatcaagtaattattttttaaaa-tgtttaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatagccttaact 10429837  T
Q  135 agtgcccc 142  Q
    ||||||||    
T  10429838 agtgcccc 10429845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 142
Target Start/End: Complemental strand, 34552265 - 34552165
Alignment:
Q  42 agtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 140  Q
    |||||||||| ||||||||| | |||||||||||||| |||||||  | ||||||  || |||||| |||| ||| ||||||||||||||||| ||||||    
T  34552265 agtaattattctttaaaaatattaaagttttcaattttcaatgcattttattaca-taactttcattaaaaattatcatttaaagtccttaaccagtgcc 34552167  T
Q  141 cc 142  Q
    ||    
T  34552166 cc 34552165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 34552610 - 34552494
Alignment:
Q  23 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||  || ||| |||||||||| ||||||||| | |||||||| ||||| ||||| |||  | ||||||| ||| ||||||||||| ||||||    
T  34552610 ctttaagcattttacatttagtaattattctttaaaaatattaaagtttttaattttcaatgtactttaatacacaacttt-cataaaaagttgccattt 34552512  T
Q  122 aaagtccttaactagtgc 139  Q
    ||||| |||||| |||||    
T  34552511 aaagttcttaacaagtgc 34552494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 3753213 - 3753103
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaa 110  Q
    |||||| || |||||||||||  ||||| ||||||||||| ||| ||||| | |||||||||||||| |||| | | || ||||||||| ||| ||||||    
T  3753213 cctgtgccactctttaagcatgataaataaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatggttacacaaacttttataaaa 3753114  T
Q  111 agttaccattt 121  Q
     ||||| ||||    
T  3753113 tgttactattt 3753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 3769436 - 3769326
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaa 110  Q
    |||||| || |||||||||||  ||| | ||||||||||| ||| ||||| | |||||||||||||| |||| | | |||||||||||| ||| ||||||    
T  3769436 cctgtgccactctttaagcatgataattaaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatgattacacaaacttttataaaa 3769337  T
Q  111 agttaccattt 121  Q
     ||||| ||||    
T  3769336 tgttactattt 3769326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 1479149 - 1479081
Alignment:
Q  73 caatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 141  Q
    |||||| ||||||| ||| ||||||| ||| |||||||| |||||||||||||| |||||  |||||||    
T  1479149 caattttcaatgcattgaatacacaattttacataaaaatttaccatttaaagtgcttaaagagtgccc 1479081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 26187557 - 26187510
Alignment:
Q  19 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaa 66  Q
    |||| ||||||||| |||||||||||||||| ||||||||||| ||||    
T  26187557 cattttttaagcattctaaattaagtaattaatttttaaaaatttcaa 26187510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 27778752 - 27778862
Alignment:
Q  22 tctttaagcatactaaattaagtaattatttttta-aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 120  Q
    |||||||| || ||||||| ||||||||||||||  |||| ||||| | ||  ||||| ||||||| | | ||||||  |||||||||||| ||||||||    
T  27778752 tctttaagaatcctaaatttagtaattattttttttaaaaagtcaacgattataattttcaatgcattcaatacacat-ttttcataaaaatttaccatt 27778850  T
Q  121 taaagtccttaa 132  Q
    |||||| |||||    
T  27778851 taaagtgcttaa 27778862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 6546804 - 6546738
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||||| || ||| || ||| ||||||||||| |||||| ||||| |||| |||||||||||||    
T  6546804 aattattttatacaaaagttaaatttttcaatttctaatgcattgattgcacatattttcataaaaa 6546738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 7465508 - 7465578
Alignment:
Q  55 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    |||||| ||||||  ||||||||||| ||||| |||||||| ||||||||| ||| ||||| ||| |||||    
T  7465508 taaaaaagtcaaatatttcaatttccgatgcattgattacataaattttcaaaaagagttatcatataaag 7465578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 26187494 - 26187452
Alignment:
Q  90 attacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||    
T  26187494 attacacaaactttcataaaaaattaacatttaaagtccttaa 26187452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 30509314 - 30509424
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||||| ||| |||| ||||||| ||||||||  |||||  |||| |||| ||||||| ||||||||   ||||| ||||| | || | ||||    
T  30509314 tctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattgattacatgtatttttataaatacttgctattt 30509413  T
Q  122 aaagtccttaa 132  Q
    | |||||||||    
T  30509414 atagtccttaa 30509424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 31702825 - 31702747
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    ||||||||| |||||| || ||   ||| |||||| |||||| |||||||||| ||||| |||||||||||| ||||||    
T  31702825 aattattttataaaaaagttaagtattttaatttctaatgcattgattacacatatttttataaaaagttactatttaa 31702747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 326
Target Start/End: Complemental strand, 33618834 - 33618740
Alignment:
Q  232 cattgtatgtgcaaggaaaatatgaagaaattaataatgaaattctagtctttcccccatttctatggagacctattccttctcgaattggaata 326  Q
    ||||||||||| ||| || |||| || |||  |||||||||| | ||||||||  |  |||||||||||||  ||||| ||||||||||||||||    
T  33618834 cattgtatgtgtaagcaagatataaataaagaaataatgaaactttagtctttttcatatttctatggagatatattctttctcgaattggaata 33618740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 354685 - 354576
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    ||||||||| |||||||| | || |||| ||| ||||  | |||||||  || ||| ||||||||||||||| | | ||| |||||||||||| ||||||    
T  354685 tttaagcattctaaattatgaaagtattcttttaaaacttaaaagtttctaacttctaatgcactgattacaaagacttttataaaaagttactatttaa 354586  T
Q  124 agtccttaac 133  Q
     | |||||||    
T  354585 ggcccttaac 354576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 22695542 - 22695473
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatttaaagtccttaactagtg 138  Q
    ||||||||| | ||||| |||||||||| ||||| | |||||||||||||||||||  ||||||| ||||    
T  22695542 tttcaattttcgatgcattgattacacatatttttaataaaaagttaccatttaaaagccttaacgagtg 22695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 2692538 - 2692434
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || | ||||| |||||||||| ||| |||| |||||   || |||||||||||| | ||| ||||||| |||| || |||| |||| ||||    
T  2692538 tctttaagaatccaaaatttagtaattattattttaaaaagtcaactattacaatttccaatgaagtgaatacacaactttttattaaaatttactattt 2692439  T
Q  122 aaagt 126  Q
    |||||    
T  2692438 aaagt 2692434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 12132520 - 12132620
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| |||| |||||| ||| |||| | || |||| |||||||| ||||||   |||||||| ||||||| | | |||||||||||||||| ||| ||||    
T  12132520 ggcactcttgaagcattctatattatgaaaatattctttaaaaacgtcaaataattcaattttcaatgcatttaatacacaaattttcatagaaacttac 12132619  T
Q  117 c 117  Q
    |    
T  12132620 c 12132620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 48551038 - 48551157
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| ||||    
T  48551038 tctttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatgcaccgattacacaattttttataaaaagttactattt 48551137  T
Q  122 aaagtccttaactagtgccc 141  Q
     | |||||||||||||||||    
T  48551138 gaggtccttaactagtgccc 48551157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 14146110 - 14146208
Alignment:
Q  34 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  14146110 ctaaattaagtaattattttttttaaatgtcaaagttttcaatttctaatgcactgattacacaaacttctataaaaatttaccatttaaagtccttaa 14146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 3027093 - 3026979
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 120  Q
    ||||||||||| ||||||||||||||| || ||||||||| |||||| ||||| |||||||||||| | | |||||||| |||||||||||||||| |||    
T  3027093 tctttaagcattctaaattaagtaatttttatttaaaaatatcaaaggtttcattttccaatgcacttcactacacaaactttcataaaaagttactatt 3026994  T
Q  121 taaagtccttaacta 135  Q
    |||||||||||||||    
T  3026993 taaagtccttaacta 3026979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 12140133 - 12140255
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa-ttttcataaaa 110  Q
    ||||||| ||| ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||    
T  12140133 cctgtggtattatttaagcatgctaaattaaataattattcttttaaaatgtcaaagttttcaatttccaatgtactgattatacaaactttttataaaa 12140232  T
Q  111 agttaccatttaaagtccttaac 133  Q
    |||||| |||||| ||| |||||    
T  12140233 agttactatttaaggtctttaac 12140255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 45757927 - 45758037
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||||||  ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  ||  ||||    
T  45757927 tctttaagcatgttaaattaagcaattattctttaaaaatgtcaaagttttcaatttacaatgcactgattacacaaactttcataaaaaaatattattt 45758026  T
Q  122 aaagtccttaa 132  Q
    || ||||||||    
T  45758027 aaggtccttaa 45758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 24313544 - 24313670
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagtta 115  Q
    |||| ||||||| ||| |||||||||  ||||||| |||||||||||||||||||||||||| |||||||  | | ||||||||||||||||||||||||    
T  24313544 ggcactctttaaacattctaaattaaacaattattctttaaaaatgtcaaagttttcaattttcaatgcattttactacacaaattttcataaaaagtta 24313643  T
Q  116 ccatttaaagtccttaactagtgcccc 142  Q
     ||||||||||| |||||  |||||||    
T  24313644 tcatttaaagtctttaaccggtgcccc 24313670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 20821303 - 20821412
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattta 122  Q
    ||||| ||| ||||| |||||||||||| ||||||||| | |||| ||| |||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  20821303 tttaaacattctaaactaagtaattattctttaaaaatattaaaggttttaatttccaatgcactttattacacaaactttcataaaaagttaccattta 20821402  T
Q  123 aagtccttaa 132  Q
    ||||||||||    
T  20821403 aagtccttaa 20821412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 25317803 - 25317923
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||| |||||| |||||| ||||||||||| ||| ||||| | ||||||||||||||||||||||  ||||||||||| ||| ||||||| |||| ||||    
T  25317803 tcttcaagcatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgcatcgattacacaaacttttataaaaatttactattt 25317902  T
Q  122 aaagtccttaactagtgcccc 142  Q
    || ||||||||| ||||||||    
T  25317903 aaggtccttaaccagtgcccc 25317923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 46725655 - 46725776
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 120  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| ||| |||||||||| |||||||| | |||||||||||||| | ||||||||   |||    
T  46725655 tctttaagcattctaaattaagtagttattttataaaaatgttaaaattttcaattttcaatgcactttattacacaaattttta-aaaaagttgttatt 46725753  T
Q  121 taaagtccttaactagtgcccca 143  Q
    ||||||| |||||||||||||||    
T  46725754 taaagtcgttaactagtgcccca 46725776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 33072181 - 33072108
Alignment:
Q  60 atgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||| | |||||||||    
T  33072181 atgtcaaagttttcaatttccaatgcattaattacacaaatttttataaaaaattaccatttcaggtccttaac 33072108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 29612018 - 29612106
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaa 109  Q
    ||||||| ||| ||||| |||||||||||| ||||||||||| | ||||||||||||||||||||| | |||||||||| |||||||||    
T  29612018 tctttaaacattctaaaataagtaattattctttaaaaatgtgacagttttcaatttccaatgcactttattacacaaactttcataaa 29612106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 37388418 - 37388494
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||||||||||||| ||||||||||| ||| |||||| ||| ||||||| |||||||||||||||| |||||||    
T  37388418 taaattaagtaattattctttaaaaatgtgaaatttttcagttttcaatgcattgattacacaaatttttataaaaa 37388494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 54911194 - 54911293
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||| ||| ||||||||| |||||||| ||| ||||||| |||||||| ||||| |||| || |||||||| ||| ||||||||||||||||    
T  54911194 ggcaatctttaaacattctaaattaaataattattcttttaaaatgttaaagttttaaattttcaatacattgattacataaactttcataaaaagttac 54911293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 1511367 - 1511453
Alignment:
Q  56 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||||||||||| ||||||||||||||||| ||||||||  |||||||| ||||||||||| |||||||  |||||  ||||||||    
T  1511367 aaaaatgtcaaagatttcaatttccaatgcattgattacattaattttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 1511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 40614356 - 40614263
Alignment:
Q  40 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||| | |||||||||| |||| | |||| ||| |||||||||| ||||||    
T  40614356 taagtaattattctttaaaaatgtcaatgttttcaattttcaatgcactttattacacaaactttcttgaaaattta-catttaaagttcttaac 40614263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 22772858 - 22772979
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaagttaccatt 120  Q
    ||||||| ||| | ||||||||||||||||   ||| ||| ||||||||||||||||||||||| | | |||  ||||| ||||| |||||||||  |||    
T  22772858 tctttaaacattccaaattaagtaattattccataacaatttcaaagttttcaatttccaatgcaatttattctacaaactttcacaaaaagttaatatt 22772957  T
Q  121 taaagtccttaactagtgcccc 142  Q
    ||||||||||||| ||| ||||    
T  22772958 taaagtccttaacgagtacccc 22772979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 28692032 - 28691955
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 99  Q
    ||||||| |||| ||||||||||||||||| ||| ||||||| ||||||||||||||| ||| || | ||||||||||    
T  28692032 tctttaaacatattaaattaagtaattattcttttaaaatgttaaagttttcaatttctaatacaataattacacaaa 28691955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 49168725 - 49168849
Alignment:
Q  8 agaacctgtggcattctttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat 106  Q
    |||| ||||| |||||||||| ||| ||||||| | |||||||| ||||||||||| | || ||||||||||| || | | |||||||||||| ||||||    
T  49168725 agaagctgtgacattctttaaacatgctaaatttactaattattcttttaaaaatggctaaattttcaatttctaaagtattgattacacaaactttcat 49168824  T
Q  107 aaaaagttaccatttaaagtccttaa 132  Q
    ||||| ||  ||||||| ||||||||    
T  49168825 aaaaa-ttttcatttaaggtccttaa 49168849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 18399239 - 18399147
Alignment:
Q  50 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    |||| |||||| ||||||  |||| |||||| ||||| ||||||||||| ||||||| | |||||||||||||||  ||||||||| ||||||    
T  18399239 ttttataaaaaagtcaaatatttcgatttccgatgcattgattacacaacttttcatgataagttaccatttaaaagccttaactaatgcccc 18399147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 1829330 - 1829243
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||||||||||| |||||   || ||||| ||||| ||||| |||||||||||||  ||||||||||||||| || |||||||    
T  1829330 aattattttttaaaaatatcaaatagtttaattttcaatgtactgaatacacaaattttcgcaaaaagttaccattttaaatccttaa 1829243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 53040467 - 53040558
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagt 113  Q
    |||||||| || |||||||||| ||||||| ||||||||  |||||   |||||||||||||| | ||| |||||||| |||||||||||||    
T  53040467 tctttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtattgaatacacaaactttcataaaaagt 53040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 9342757 - 9342672
Alignment:
Q  26 taagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaa 110  Q
    ||||||| ||| ||||| ||||||||  |||||||||| |||||||||||||| |||||||  | |||||||||||||| ||||||    
T  9342757 taagcattctagattaaataattattcattaaaaatgttaaagttttcaattttcaatgcattttattacacaaatttttataaaa 9342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 48322314 - 48322241
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 95  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||  |||| ||||||||| || ||||||||    
T  48322314 tctttaagcattctaaaataagtaattatttttttaaaaagtcaaatgtttcgatttccaatacattgattaca 48322241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 50644132 - 50644189
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttc 79  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||| |||| ||||||    
T  50644132 tctttaagtatattaaattaagtagttattttttaaaaatgtcaaattttttaatttc 50644189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 39651994 - 39652034
Alignment:
Q  101 tttcataaaaagttaccatttaaagtccttaactagtgccc 141  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  39651994 tttcataaaaagttaccatttaaagtccttaactaatgccc 39652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 45584432 - 45584343
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||||||||  ||||||||||||||||| ||| ||||| |  ||||||| ||||| ||||  | |||||||||||| |||||||||||||||    
T  45584432 tttaagcatgttaaattaagtaattattcttttaaaatat--aagtttttaattttcaatatattgattacacaaactttcataaaaagtta 45584343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 25548258 - 25548203
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    |||||||||| |||||| |||||||||| ||||||||||||| ||| |||||||||    
T  25548258 tttcaatttctaatgcattgattacacatattttcataaaaatttatcatttaaag 25548203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 37708430 - 37708508
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 95  Q
    |||| |||||||||||| |||| |||| ||||| | |||||||| || |||  ||||||||| ||||||||||||||||    
T  37708430 ggcactctttaagcatattaaaataagcaattagtctttaaaaaagttaaacatttcaattttcaatgcactgattaca 37708508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 38009026 - 38009128
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||| ||||||||||| ||||||| || |||||||  |||| || ||||||  |||||||||| ||||| | | || ||||||||||||||||||| |||    
T  38009026 ggcactctttaagcattctaaattgagaaattattccttaagaaagtcaaacattttcaattttcaatggattaatcacacaaattttcataaaaactta 38009125  T
Q  116 cca 118  Q
    |||    
T  38009126 cca 38009128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 52340188 - 52340118
Alignment:
Q  63 tcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||| |||| |||||| ||||| |||||||||| ||||| || | |||||||||||||||| |||||||    
T  52340188 tcaaagatttcgatttccgatgcattgattacacatatttttatgataagttaccatttaaaggccttaac 52340118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 2831545 - 2831634
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||||||| || | |||| ||| ||||||||||||| || ||||||  |||||||||  |||||| |||||| |||| ||||||||||||    
T  2831545 tctttaaggattccaaatcaagaaattattttttaataaagtcaaatatttcaattttaaatgcaatgattatacaagttttcataaaaa 2831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 37359467 - 37359570
Alignment:
Q  25 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaa--ttttcataaaaagttaccattt 121  Q
    ||||||||  |||||||||||||||||   ||||||||| |||||||||||||| |||| ||| | ||||||||||  || ||| ||||| |||||||||    
T  37359467 ttaagcattttaaattaagtaattattccataaaaatgttaaagttttcaattttcaattcactttattacacaaactttatca-aaaaaattaccattt 37359565  T
Q  122 aaagt 126  Q
    |||||    
T  37359566 aaagt 37359570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 40546345 - 40546398
Alignment:
Q  42 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 95  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||| ||||||||    
T  40546345 agtaattattttttaaaaaagtcaaatatttcgatttccaatgcattgattaca 40546398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 19898187 - 19898107
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    ||||||||| || |||  |||||  ||||||||| ||||||| |||||||||| ||||||||||||| |||| || |||||    
T  19898187 aattattttatataaaaatcaaatatttcaattttcaatgcattgattacacatattttcataaaaatttacaatgtaaag 19898107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 54912058 - 54911986
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||||||||  ||||| |||||||||| |||||||| | |||||  |||||| || ||||||||||||||||    
T  54912058 tttcaatttcggatgcattgattacacatattttcatgataagttgtcatttataggccttaactagtgcccc 54911986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 25062034 - 25061987
Alignment:
Q  46 attattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 93  Q
    |||||| ||||||||||| ||| |||||||||| ||||||||||||||    
T  25062034 attattctttaaaaatgttaaaattttcaattttcaatgcactgatta 25061987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 48811479 - 48811372
Alignment:
Q  19 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacca 118  Q
    ||||||||||| || ||||||| || || ||||  ||||||| ||| ||  || ||| || ||||||| ||||||||||| |||||||||||| |||| |    
T  48811479 cattctttaaggatcctaaatttagaaaatattcattaaaaaagtctaatgttacaaatttcaatgcattgattacacaatttttcataaaaacttacta 48811380  T
Q  119 tttaaagt 126  Q
    || |||||    
T  48811379 ttaaaagt 48811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 54290890 - 54290795
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaag 112  Q
    |||| |||||||||||  ||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| |||||||||||||    
T  54290890 ggcactctttaagcatgataaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaagttttcataaaaag 54290795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 12908930 - 12908860
Alignment:
Q  18 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcact 88  Q
    ||||| ||||| |||  ||||| ||||||||||||||||||||  ||||| ||||||||||  ||||||||    
T  12908930 gcattgtttaaacattttaaataaagtaattattttttaaaaaaatcaaaattttcaatttttaatgcact 12908860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 23554781 - 23554672
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || || ||| ||| |||||||||||||||| |||||||||| | |||||||||||| | | ||||| || | ||||||||  || ||||||    
T  23554781 tctttaaggattcttaataaagaaattattttttaaaaa-gtcaaagtttacgatttccaatgcaataaatacacgaactatcataaaatctttccattt 23554683  T
Q  122 aaagtccttaa 132  Q
     |||| |||||    
T  23554682 taagttcttaa 23554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 27968262 - 27968307
Alignment:
Q  88 tgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||||| |||||||| | |||||||||||||||| |||||||    
T  27968262 tgattacacatattttcatgataagttaccatttaaaggccttaac 27968307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 34758946 - 34759047
Alignment:
Q  41 aagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 140  Q
    ||||||||||||| |||||| || |||  |||| | | |  ||||| |||||||| | |||| ||| | ||||||| |||||||| ||||||||||||||    
T  34758946 aagtaattattttataaaaaagtgaaatatttcgactcctgatgcattgattacatatatttccatgataagttactatttaaagcccttaactagtgcc 34759045  T
Q  141 cc 142  Q
    ||    
T  34759046 cc 34759047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 41750832 - 41750755
Alignment:
Q  50 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtc 127  Q
    |||||||| ||||||||| |||| ||||| ||||||| |||||| || || ||| || | || |||||||||||||||    
T  41750832 ttttttaataatgtcaaactttttaatttacaatgcattgattatactaagttttatcacaacttaccatttaaagtc 41750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 43803992 - 43804061
Alignment:
Q  47 ttattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| |||||||||||||||||    
T  43803992 ttattctttaaaaaagtcaaacaattcaatttccaatgtattaaatacacaagttttcataaaaagttac 43804061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 4305260 - 4305156
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||| |||| |||||||| |||||||||| || |  ||||||||||||| ||||||  ||  || ||| |||| | ||||||||| | ||||||||||||    
T  4305260 cctggggcactctttaaggatactaaatttagaatatattttttaaaaaagtcaaatattataaattctaatgtattgattacacgatttttcataaaaa 4305161  T
Q  112 gttac 116  Q
     ||||    
T  4305160 cttac 4305156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 40690235 - 40690287
Alignment:
Q  71 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    |||||||| |||| || ||| ||||||| ||||||||||||| ||||||||||    
T  40690235 ttcaattttcaatacattgaatacacaagttttcataaaaagctaccatttaa 40690287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 46547858 - 46547794
Alignment:
Q  52 ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||| ||||||   |||||||||||||||| ||| |||| || |||||||||||| ||||    
T  46547858 ttttaaaaaagtcaaataattcaatttccaatgcattgaatacataatttttcataaaaaattac 46547794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 46712009 - 46711949
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 95  Q
    |||| |||||||||||| |||||||| ||||||  |||  |||||||||||| ||||||||    
T  46712009 taaaataagtaattattctttaaaaaagtcaaacattttgatttccaatgcattgattaca 46711949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 53195445 - 53195497
Alignment:
Q  223 ataaatatgcattgtatgtgcaaggaaaatatgaagaaattaataatgaaatt 275  Q
    ||||||||| ||||||||||| || || |||||||||||  ||||||||||||    
T  53195445 ataaatatgtattgtatgtgccagcaagatatgaagaaagaaataatgaaatt 53195497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 53766777 - 53766702
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||||||||||| || ||||  |||||||| ||||||| | | |||||||| ||||||||||  |||||||||    
T  53766777 aattattttttaaaaaagtaaaag-cttcaattttcaatgcaataaatacacaaactttcataaaatattaccattt 53766702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 14309197 - 14309071
Alignment:
Q  20 attctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcata-aaaagtta--c 116  Q
    |||||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||| |||  |    
T  14309197 attctttaagcatattaaattaagtagttattctttaaaaatatcaaagttttcaatttccaatgcattaattacacaaattttcataaaaaaattactc 14309098  T
Q  117 catttaaagtccttaactagtgcccca 143  Q
    ||||||| |||||||||||||||||||    
T  14309097 catttaaggtccttaactagtgcccca 14309071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 38595037 - 38594923
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    |||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||||||||| | |||| | ||||||||||||||| ||| |||||||    
T  38595037 tttaagtatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcattaattatataaattttcataaaaatttatcatttaa 38594938  T
Q  124 agtccttaactagtg 138  Q
    |||||||||| ||||    
T  38594937 agtccttaaccagtg 38594923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 26453748 - 26453630
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| |||  ||||||||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||| ||||||  |||||||||    
T  26453748 tctttaaacattttaaattaagtaat-attttttaaaaatgtcaaacttttcaattttcaatgcgctggttacacaaatttttataaaagtttaccattt 26453650  T
Q  122 aaagtccttaactagtgccc 141  Q
    || |||||||| ||||||||    
T  26453649 aaggtccttaattagtgccc 26453630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 16636742 - 16636656
Alignment:
Q  51 tttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 137  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  16636742 tttttaaaaatatcaaagttgtcaattttcaatgcactaattacacaaacttttataaaaagttaccatttaaggtccttaactagt 16636656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 17774388 - 17774272
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 122  Q
    |||||||||  ||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||| | |||||||||| ||||||||||||||| ||||||    
T  17774388 tttaagcattttaaatcaagtaattattctttaaaaatatcaaatttttcaatttccaatacactttattacacaaa-tttcataaaaagttatcattta 17774290  T
Q  123 aagtccttaactagtgcc 140  Q
    ||||| ||||| ||||||    
T  17774289 aagtcattaaccagtgcc 17774272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 26432261 - 26432378
Alignment:
Q  23 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 122  Q
    ||||||||||  ||||||||||||||||||||| |||||   ||| |||||||||||||||| ||||||||||| || ||||||||||| |||||||||     
T  26432261 ctttaagcattttaaattaagtaattatttttttaaaataataaacttttcaatttccaatgtactgattacactaactttcataaaaatttaccatttt 26432360  T
Q  123 aagtccttaactagtgcc 140  Q
    | || |||||||| ||||    
T  26432361 aggttcttaactaatgcc 26432378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 22601786 - 22601890
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 134  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||| ||||  |||||||| ||||||||| ||||||| ||| ||||||| ||| ||||||    
T  22601786 taaattaagtaattattttttaaaaatatcaaaatttttaattttcaataaactgattatacaaatttttataaaaatttatcatttaaggtctttaact 22601885  T
Q  135 agtgc 139  Q
    |||||    
T  22601886 agtgc 22601890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 27325917 - 27325814
Alignment:
Q  37 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 136  Q
    ||||| ||||||||| ||||||||||||||| |||||||||| |||||||||| |||||  ||||||  |||||| ||| ||||||| ||||||||||||    
T  27325917 aattaggtaattattctttaaaaatgtcaaacttttcaattttcaatgcactggttacattaatttttgtaaaaatttatcatttaaggtccttaactag 27325818  T
Q  137 tgcc 140  Q
    ||||    
T  27325817 tgcc 27325814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 12221435 - 12221523
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 110  Q
    ||||||| |||||||||||||||| ||||| ||||||| |||||||||||| ||||| ||||| |||||||||| |||||||| |||||    
T  12221435 tctttaaacatactaaattaagtagttattctttaaaattgtcaaagtttttaattttcaatgtactgattacataaattttcgtaaaa 12221523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 41568775 - 41568708
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg 89  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  41568775 tctttaagcatactaaattaagttattattcttcaaaaatgtcaaagttttcaattttcaatgcactg 41568708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 4695070 - 4695164
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||| |||||||||  ||||||| ||||||||| | |||||||| |||||||||||||||||||| ||||| || |||||||| ||||    
T  4695070 tctttaagcatgctaaattaaaaaattattctttaaaaatattaaagtttttaatttccaatgcactgattatacaaacttccataaaaaattac 4695164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 21259513 - 21259415
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    ||||||||  ||||||| |||||| |||||||| |||| ||||| |||||||||||||||||||| || |||||||||||| ||||||| ||| |||||    
T  21259513 taaattaaaaaattattctttaaagatgtcaaaatttttaattttcaatgcactgattacacaaacttccataaaaagttatcatttaaggtctttaac 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 5356410 - 5356286
Alignment:
Q  18 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttacc 117  Q
    |||||||||||| |||| ||| |||| ||||| ||| |||||| ||||||  |||| |||| | ||||| |||||||||| |||||||| | ||||||||    
T  5356410 gcattctttaaggataccaaaataagaaattaatttataaaaacgtcaaatatttcgattttcgatgcattgattacacatattttcatgataagttacc 5356311  T
Q  118 atttaaagtccttaactagtgcccc 142  Q
    |||||||| ||||||| ||| ||||    
T  5356310 atttaaagaccttaaccagtacccc 5356286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 29829588 - 29829704
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| |||  ||||||| ||||||||||||||||||||||| | |||||| |||||||| ||||||||| |||||  |||||||||| | || ||||    
T  29829588 tctttaaacattttaaattatgtaattattttttaaaaatgtcacacttttcagtttccaattcactgattatacaaacattcataaaaattaactattt 29829687  T
Q  122 aaagtccttaactagtg 138  Q
     | ||| ||||||||||    
T  29829688 gaggtctttaactagtg 29829704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 3263772 - 3263862
Alignment:
Q  49 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 139  Q
    ||||| |||||| ||||||| |||| |||||| ||||| |||||||||| ||||| || | |||||||||||||||| |||||||||||||    
T  3263772 attttataaaaaagtcaaagatttcgatttccgatgcattgattacacatattttaatgataagttaccatttaaagaccttaactagtgc 3263862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 10228317 - 10228426
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||| | ||||||||||| ||| ||||| | |||||||||||||||| |||||||| ||||||||| |||  ||||||||||| ||||    
T  10228317 tctttaagcatgctaa-taaagtaattattctttcaaaatttaaaagttttcaatttccgatgcactggttacacaaacttttttaaaaagttactattt 10228415  T
Q  122 aaagtccttaa 132  Q
    || ||| ||||    
T  10228416 aatgtctttaa 10228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 27794944 - 27794854
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 135  Q
    ||||||| ||| ||||| ||||| ||||||||||| |||||  |||||| ||||| ||| ||||||| |||||||||||||||||||||||    
T  27794944 aattattgttttaaaatatcaaaattttcaatttcaaatgcgatgattatacaaacttttataaaaaattaccatttaaagtccttaacta 27794854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 5758555 - 5758680
Alignment:
Q  17 ggcattctttaagcatactaaattaa--gtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtt 114  Q
    |||| ||||||||||| |||||||||  |||| |||| |||||||| |  |||  |||||||| |||||  ||||| |||||||| ||||||||||| ||    
T  5758555 ggcactctttaagcattctaaattaaaagtaactattctttaaaaaagcgaaacatttcaattcccaat--actgaatacacaaactttcataaaaactt 5758652  T
Q  115 accatttaaagtccttaactagtgcccc 142  Q
    ||||||||||||||||||  ||||||||    
T  5758653 accatttaaagtccttaaaaagtgcccc 5758680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 10410443 - 10410567
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtta 115  Q
    |||| ||||||| | | ||||||||||||||  |||||||||||||||| | | ||||||||||||||||| | |||  ||||| ||| |||||||||||    
T  10410443 ggcactctttaaactttctaaattaagtaatatttttttaaaaatgtcagaatattcaatttccaatgcactttatttaacaaacttttataaaaagtta 10410542  T
Q  116 ccatttaaagtccttaactagtgcc 140  Q
    | ||||||| | |||||| ||||||    
T  10410543 caatttaaaatgcttaaccagtgcc 10410567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 26686747 - 26686667
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||  ||||||||||| |||||||||||||||    
T  26686747 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagtta 26686667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 26956478 - 26956398
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||  ||||||||||| |||||||||||||||    
T  26956478 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagtta 26956398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 36609237 - 36609150
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||| ||| ||||||||| |||||||| || |||||| |||||||||||||||| ||||| ||| |||||||||| ||| |||||||    
T  36609237 tttaaacattctaaattaaataattattcttcaaaaatatcaaagttttcaattttcaatgtactaattacacaaacttttataaaaa 36609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 8247092 - 8247180
Alignment:
Q  49 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 137  Q
    ||||| |||||| ||||||  |||| |||||| ||||| |||||| |||| ||||||| | |||||||||||||||| |||||||||||    
T  8247092 attttataaaaaagtcaaatatttcgatttccgatgcattgattatacaacttttcatgataagttaccatttaaagaccttaactagt 8247180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 43000760 - 43000868
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaa-gttaccatttaaagtccttaa 132  Q
    ||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||| |  | | ||||| ||||||||||| || || ||||||||| |||||    
T  43000760 taaataaagtaattattctttaaaaatgtcaaaatttttaattttcaatgcactttgtcaaacaaactttcataaaaaggtaacaatttaaagtacttaa 43000859  T
Q  133 ctagtgccc 141  Q
    |||||||||    
T  43000860 ctagtgccc 43000868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 28639570 - 28639669
Alignment:
Q  42 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 140  Q
    |||||||||| ||||||||||| ||||||||||  ||||||||||| | |||||||||| ||| ||||||| ||   |||||||||||||| | ||||||    
T  28639570 agtaattattctttaaaaatgttaaagttttcagcttccaatgcactttattacacaaacttttataaaaaattgttatttaaagtccttatccagtgcc 28639669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 10051755 - 10051845
Alignment:
Q  49 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 139  Q
    ||||| |||||| ||||||  |||  |||||| ||||| |||||| |||| ||||||||| ||||||||||||||||  ||||||||||||    
T  10051755 attttataaaaaagtcaaatatttatatttccgatgcattgattatacaacttttcataataagttaccatttaaaggtcttaactagtgc 10051845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 31672444 - 31672530
Alignment:
Q  56 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||| ||||||  ||||||||||||||||| |||||||| ||| ||||| ||||||||||| |||||||  |||||  ||||||||    
T  31672444 aaaaaagtcaaatgtttcaatttccaatgcattgattacaaaaaatttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 31672530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 31914168 - 31914277
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||  ||| |||||    |||| ||| ||||| || ||||||||| | |||||||||    
T  31914168 tctttaagcattctaaattaagtaattattctttaaaaa-gtcaaacattttaattttttgtgcattgaatacaccaaatttcataaagatttaccattt 31914266  T
Q  122 aaagtccttaa 132  Q
    ||| |||||||    
T  31914267 aaaatccttaa 31914277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 39177675 - 39177768
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||| |||||||| || |||||| ||||||||||  ||| ||||| | ||||||||||||||||||| |||||||| ||||| |||| |||||||    
T  39177675 ggcactctttaag-atgctaaataaagtaattatcctttcaaaatttaaaagttttcaatttccaatacactgattgcacaactttttataaaaa 39177768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 26663635 - 26663708
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 97  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||  |||| |||||||||| | ||||||||||    
T  26663635 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacaca 26663708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 26935230 - 26935303
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 97  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||  |||| |||||||||| | ||||||||||    
T  26935230 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacaca 26935303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 22473493 - 22473553
Alignment:
Q  82 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 142  Q
    ||||| |||||||||| |||||||  | |||||||||||||||| ||||||||||||||||    
T  22473493 atgcattgattacacatattttcacgataagttaccatttaaagcccttaactagtgcccc 22473553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 967100 - 967194
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||||| |||||| |  |||||| ||||||||  |||||   |||||||||||||||| ||| ||||  ||||||||| |||||||||    
T  967100 tctttaagcataccaaattaggatattattctttaaaaaattcaaatagttcaatttccaatgcattgaatacatgaattttcatgaaaagttac 967194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 30104797 - 30104907
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 115  Q
    |||| ||||||||||| | ||||| ||||| |||||||| |||| |||||   || |||||||||||||| | | ||||||| |||||| |||||| |||    
T  30104797 ggcactctttaagcatcccaaatttagtaactatttttttaaaaagtcaacaattacaatttccaatgcattcaatacacaacttttcattaaaaactta 30104896  T
Q  116 ccatttaaagt 126  Q
    ||| |||||||    
T  30104897 ccacttaaagt 30104907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 30501253 - 30501127
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 115  Q
    |||| ||||||||||| | ||||| |||||||||| ||| |||| |||||   || ||||||||||| || | | ||||||| |||||| | |||| |||    
T  30501253 ggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaactta 30501154  T
Q  116 ccatttaaagtccttaactagtgcccc 142  Q
    | ||||||||| |||||| ||||||||    
T  30501153 ctatttaaagtgcttaacaagtgcccc 30501127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 30541596 - 30541470
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 115  Q
    |||| ||||||||||| | ||||| |||||||||| ||| |||| |||||   || ||||||||||| || | | ||||||| |||||| | |||| |||    
T  30541596 ggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaactta 30541497  T
Q  116 ccatttaaagtccttaactagtgcccc 142  Q
    | ||||||||| |||||| ||||||||    
T  30541496 ctatttaaagtgcttaacaagtgcccc 30541470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 31889662 - 31889708
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||||||||| |||||| |||||||||| ||||||||||||||||||    
T  31889662 tttcaatttctaatgcattgattacacatattttcataaaaagttac 31889708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 34032203 - 34032125
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 95  Q
    |||| ||||||||||| ||||| |||||||||||| |||||||| || |||  |||||||||| || ||| ||||||||    
T  34032203 ggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaatttcaaaggcaatgattaca 34032125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 14475085 - 14475009
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| | |||||||||||||  ||||||||||  ||||  |||||||| ||||||||| |||||||||| ||||    
T  14475085 aattattctataaaaatgtcaaatatttcaatttcagatgctttgattacataaattttcaaaaaaagttactattt 14475009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 14042484 - 14042571
Alignment:
Q  45 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||| |||||||| ||||||  |||  |||||||||||| |||||| ||||||||| || |||| ||  ||||||||||| ||||    
T  14042484 aattattatttaaaaaagtcaaatattttgatttccaatgcattgattatacaaatttttattaaaatttgtcatttaaagtctttaa 14042571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 25437983 - 25437888
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaat-gtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||| |||||||||| | ||||| ||||||||  || |||   |||||||||||||| | | | ||||||| |||||||||||||||||    
T  25437983 tctttaagcatgctaaattaagaagttattctttaaaaaaagtgaaacagttcaatttccaatgtattaaatacacaagttttcataaaaagttac 25437888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 779079 - 779192
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||| ||| | ||| | ||||||||||||||||||| || |||  |||| |||||||||||| ||||||||||  ||||| |||| |  |||    
T  779079 ggcactctttaaacattcaaaaattagtaattattttttaaaaa-gttaaatgtttcgatttccaatgcattgattacacactttttcgtaaatacatac 779177  T
Q  117 catttaaagtcctta 131  Q
     ||||| ||||||||    
T  779178 tatttatagtcctta 779192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 28207778 - 28207696
Alignment:
Q  57 aaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtg 138  Q
    |||||||||||||||| ||| || ||||||||  ||| |||||| ||||||||| | || | ||||||||| |||||||||||    
T  28207778 aaaatgtcaaagtttttaatatcaaatgcactttattgcacaaactttcataaacatttgctatttaaagttcttaactagtg 28207696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 2918705 - 2918616
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||||||||||   ||||| | |||||||||||||||||||||||   ||  ||||||||||||| | | ||||||| ||||||| ||||    
T  2918705 tctttaagcatttcaaatttaataattattttttaaaaatgtcaactattataatttccaatgcatttaatacacaacttttcattaaaa 2918616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 20125713 - 20125652
Alignment:
Q  71 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||||||| | ||||||| | | ||||| |||||||||||| |||| |||||||||||||||    
T  20125713 ttcaattttcgatgcactaaatgcacaatttttcataaaaatttactatttaaagtccttaa 20125652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 24041131 - 24041030
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||||  |||||| | ||||||| ||||||||  |||||   || |||||||||| || | | |||| || ||||||||||||||||| ||||    
T  24041131 tctttaagcatatcaaattatgaaattattctttaaaaaattcaaatagtttaatttccaatacattaaatacataacttttcataaaaagttactattt 24041032  T
Q  122 aa 123  Q
    ||    
T  24041031 aa 24041030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 36160317 - 36160362
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaa 67  Q
    ||||||||||| ||||| |||| |||||||||||||||| ||||||    
T  36160317 tctttaagcattctaaaataagcaattattttttaaaaaagtcaaa 36160362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 9740932 - 9740968
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaa 60  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  9740932 tttaaacattctaaattaagtaattattttttaaaaa 9740968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 12848585 - 12848467
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| |||||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||      
T  12848585 ggcactctttaagcatattaaattaagtaactattctttaataatgtcaaagttttcaatttccattgcactaattacacaaactttcataaaaagttgt 12848486  T
Q  117 catttaaagtccttaacta 135  Q
    ||||||| |||||||||||    
T  12848485 catttaaggtccttaacta 12848467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 24389736 - 24389632
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  24389736 ggcactctttaagcatgctaaattaagtaattattcttttaagatgtcaaagttttcaatttccaatgcgctgattacacaaactttcataagaagttac 24389637  T
Q  117 cattt 121  Q
    |||||    
T  24389636 cattt 24389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 33068639 - 33068540
Alignment:
Q  34 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||  ||||  |||||||||    
T  33068639 ctaaattaagtaattattttttaaaaatgtgaaagttttcaatttctaatgcactgattatacaaactttcataaaaagttactttttatggtccttaac 33068540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 33454966 - 33455067
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||||||| || |||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||| ||||    
T  33454966 tctttaagcatgctaaattaagaaactattctttaaaaatgtcaaagttttcaatttacaatacattgattacacaacttttcataaaaagttactattt 33455065  T
Q  122 aa 123  Q
    ||    
T  33455066 aa 33455067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 431726 - 431621
Alignment:
Q  38 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactag 136  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||| ||||| |     
T  431726 attaagtaattattctttaaaaatgttaaaattttcaatttccaatgcacttttttacacaaactttcataaaaagttaccatttaaagtctttaaccaa 431627  T
Q  137 tgcccc 142  Q
    ||||||    
T  431626 tgcccc 431621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 6084010 - 6083911
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| |||||  ||||||||||||| ||| ||||||||||| |||||    
T  6084010 tctttaagcatactaaatttagtaattattattttaaaatatcaaagttttcaattttcaatgtgctgattacacaaacttttataaaaagttatcattt 6083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 6334780 - 6334678
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||  |||||||||| |||||    
T  6334780 tctttaaacatgctaaattaaaaaattattttttaaaaatgtcaaagttttcaatttccaatgcattgattatataaacttttgtaaaaagttatcattt 6334681  T
Q  122 aaa 124  Q
    |||    
T  6334680 aaa 6334678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 12205530 - 12205620
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||||||||||||||||||||| |||| ||||||||||| |||| |||||||| | |||||||||||||||| ||||||||||||||||||    
T  12205530 taaattaagtaattattttttataaatatcaaagttttccatttgcaatgcacattattacacaaattttcaaaaaaagttaccatttaaa 12205620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 565802 - 565706
Alignment:
Q  22 tctttaagcatactaaattaagtaat--tattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||||| |||||||||||||   |||| ||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  565802 tctttaagcatgctaaattaagtaaaagtattctttaaaaatgtgaaagttttcaatttcctatgcactaattacacaaactttcataaaaagttac 565706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 8964392 - 8964477
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    ||||||||| |||||||||||||||||| |||||||| || |||  ||||||||||||||||| ||||||||||||||||||||||    
T  8964392 tttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaa 8964477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 30523014 - 30523111
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||||||| ||||| || ||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||| || |||||    
T  30523014 taaattaaataatttttctttaacaatgtcaaagttttcaatttccaatgtactaattacacaaactttcataaaaagttaccatctaaggtacttaa 30523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 42342581 - 42342487
Alignment:
Q  38 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    ||||| |||||||| ||||||||||||||| ||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  42342581 attaaataattattctttaaaaatgtcaaaattttcaatttt-aatacactgattaaacaaattttcataaaaagttaccatttaatatccttaac 42342487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 33634906 - 33634796
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| ||  |||||||| ||||||||  || ||||| | |||||||||||||||||||| ||||||| ||||| |||| |||||||||||| ||||    
T  33634906 tctttaaggatgttaaattaaataattattcgtttaaaatatgaaagttttcaatttccaatgtactgattgcacaactttttataaaaagttactattt 33634807  T
Q  122 aaagtccttaa 132  Q
    |||||||||||    
T  33634806 aaagtccttaa 33634796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 6411480 - 6411367
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    ||||| ||| |||||| ||||||||||| ||| ||||| | |||||||||||||||||||| |||||||||||| | ||| |||||||||||  ||||||    
T  6411480 tttaaacatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgtactgattacacatacttttataaaaagttattatttaa 6411381  T
Q  124 agtccttaactagt 137  Q
     || ||||||||||    
T  6411380 ggttcttaactagt 6411367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 32066740 - 32066833
Alignment:
Q  42 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 135  Q
    ||||||||||||||  ||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||  |||||| |||||||||||    
T  32066740 agtaattattttttttaaatgtcaaagtttttaatttctaatgtactaattacacaaactttcataaaaagttataatttaaggtccttaacta 32066833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 9049256 - 9049148
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 123  Q
    |||||||||  ||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||| | |||||||||||||| |||||||||||  ||||||    
T  9049256 tttaagcatgttaaattaagtaattattcttttaaaatgttaaatttttcaattttcaatgcattaattacacaaatttttataaaaagttattatttaa 9049157  T
Q  124 agtccttaa 132  Q
     || |||||    
T  9049156 ggttcttaa 9049148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 3074073 - 3074187
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||| |||||||||||  |||||||||||||||||  || ||||| |||||| ||||||||||||||||||||||||||   || ||| || ||||||||    
T  3074073 ggcactctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattac---aactttaatgaaaagtta 3074169  T
Q  116 ccatttaaagtccttaac 133  Q
    |||||||||||| |||||    
T  3074170 ccatttaaagtctttaac 3074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 2826074 - 2825977
Alignment:
Q  12 cctgtggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    ||||||| | ||||||||||||||||| |||| |||||||||||||||| || |||  |||| |||||||||||| |||||||||| ||||| |||||    
T  2826074 cctgtggtactctttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcattgattacacacatttttataaa 2825977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 4655069 - 4654992
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 99  Q
    ||||||||||| ||||||||  |||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||    
T  4655069 tctttaagcatgctaaattagataattatttttttaaaatatcaaagttttcaattttcaatgcaccgattacacaaa 4654992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 9448450 - 9448570
Alignment:
Q  19 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgat-tacacaaattttcataaaaagttacc 117  Q
    ||||||| ||| || |||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||| |  || || ||||||||||  |||      
T  9448450 cattcttaaagtattctaaattaagtagttattttttaaaactgtcaaacttttcaattttcaatgcactgatgtgtactaactttcataaaagtttatt 9448549  T
Q  118 atttaaagtccttaactagtg 138  Q
    |||||| ||||||||||||||    
T  9448550 atttaaggtccttaactagtg 9448570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 21277551 - 21277666
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| ||  ||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||||||||  || ||| ||||||  |||||||||    
T  21277551 tctttaagtattttaaattaagtaattatttttttaaaatgtcaaacttttcaa-ttgcaatgcactgattacagtaacttttataaaagtttaccattt 21277649  T
Q  122 aaagtccttaactagtg 138  Q
    ||  |||||||| ||||    
T  21277650 aagatccttaaccagtg 21277666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 40874826 - 40874934
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    ||||||||||||||||||||||||||||| |||  |||||||||| ||| ||||| ||  ||| || ||||||||||  |||| ||||||||||||||||    
T  40874826 taaattaagtaattattttttaaaaatgttaaactttttcaattttcaacgcactaatggcactaactttcataaaagtttactatttaaagtccttaac 40874925  T
Q  134 tagtgcccc 142  Q
     ||||||||    
T  40874926 cagtgcccc 40874934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 12762979 - 12762896
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca 105  Q
    |||||||||||   |||||||||||||||| || |||||||| ||| ||||||||||||||||||||| ||||||||| |||||    
T  12762979 tctttaagcatttaaaattaagtaattattcttaaaaaatgttaaaattttcaatttccaatgcactgtttacacaaactttca 12762896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 30822815 - 30822764
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca 86  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30822815 taaattaagtaattattttttgaaaatgtcaaagttttcaatttccaatgca 30822764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 13538389 - 13538495
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||||||||||||   ||||||| ||||||||  |||||   |||||||||||||||| ||| |||| || |||||||||||||||||    
T  13538389 ggcactctttaagcatactaaattagaaaattattctttaaaaaattcaaataattcaatttccaatgcattgaatacataacttttcataaaaagttac 13538488  T
Q  117 catttaa 123  Q
     ||||||    
T  13538489 tatttaa 13538495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 29685812 - 29685694
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| ||| |||||| ||||||||||| ||| ||||| | |||||| ||||||| ||| |||| |||||||||||||||  ||||||||||  ||||    
T  29685812 tctttaaacatgctaaataaagtaattattctttcaaaatttaaaagttctcaattttcaacgcaccgattacacaaatttttgtaaaaagttattattt 29685713  T
Q  122 aaagtccttaactagtgcc 140  Q
     |  |||||||||||||||    
T  29685712 tagatccttaactagtgcc 29685694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 30869673 - 30869589
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaatttt 103  Q
    |||| ||||||||||| ||||||||| |  ||||| ||||||||||| ||||||||||||||| ||| ||||||| |||||||||||    
T  30869673 ggcactctttaagcatgctaaattaaat--ttattctttaaaaatgttaaagttttcaatttctaatacactgataacacaaatttt 30869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 18043839 - 18043942
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| |||||||||| ||||| | ||||||| ||||| | |||||||| | ||| ||||||| | |||||||||| ||| |||||||||||| ||||    
T  18043839 tctttaaacatactaaataaagtact-atttttttaaaatttaaaagtttttagttttcaatgcattaattacacaaagttttataaaaagttactattt 18043937  T
Q  122 aaagt 126  Q
    |||||    
T  18043938 aaagt 18043942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 11385462 - 11385561
Alignment:
Q  34 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||||| ||||||||||| ||||||| | ||||| ||||| ||||||||| ||| | || ||||||| ||| ||||||||||| |||||||| |||||||    
T  11385462 ctaaatcaagtaattattctttaaaattatcaaatttttctatttccaatacactttataacacaaacttttataaaaagttatcatttaaaatccttaa 11385561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 28695684 - 28695605
Alignment:
Q  59 aatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagt 137  Q
    ||||||||||| |||||||||||||||| |  |||||||||| ||| |||||||||||| |||||||||  |||||||||    
T  28695684 aatgtcaaagtgttcaatttccaatgcaatttattacacaaacttttataaaaagttactatttaaagtgtttaactagt 28695605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 2796626 - 2796517
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||||||||||||| |||||||||||||||||||         |||||||||| ||||  |||||||||||||| ||| ||||||| |||| ||||    
T  2796626 tctttaagcatactaaataaagtaattattttttaaaa---------ttttcaattttcaatatactgattacacaaacttttataaaaaattactattt 2796536  T
Q  122 aaagtccttaactagtgcc 140  Q
     |  ||||||| |||||||    
T  2796535 tatatccttaattagtgcc 2796517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 27692822 - 27692744
Alignment:
Q  39 ttaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||||||||||||||||  |||||| || ||||| |||||||||||||| | |||||| ||||||| ||||||||||||    
T  27692822 ttaagtaattattttttttaaatgtaaatgtttttcaatttccaatgcatttattacataaatttttataaaaagttac 27692744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 28858098 - 28858152
Alignment:
Q  18 gcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt 72  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||    
T  28858098 gcattctttaagcattctaaattaagtaaatattctttaaaaatgtcaaattttt 28858152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 3882609 - 3882698
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat 106  Q
    |||| ||||||||||| ||||| |||| ||||||| |||||||| ||||||  ||||  ||| ||||||| |||||||||| ||||||||    
T  3882609 ggcactctttaagcattctaaaataagcaattattctttaaaaaggtcaaatatttcggttttcaatgcattgattacacacattttcat 3882698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 5962023 - 5961954
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 139  Q
    ||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||  ||||| ||||||    
T  5962023 tttcaatttccaatgcattgattacataaattttcaaaaacagttactatttaaaggtcttaaatagtgc 5961954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 11944981 - 11944892
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||||||| || |||| || ||||||||||||| |||||||||||   || |||||| ||||||| ||| ||||||| ||||||||||||    
T  11944981 tctttaaggatcctaattttagtaattatttttaaaaaatgtcaactattacaattttcaatgcattgaatacacaacttttcataaaaa 11944892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 37284981 - 37284896
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccat 119  Q
    ||||||||||||||||||||||||||| | ||| |||||||||| ||||||| | ||||| |||| ||  || |||||||||||||    
T  37284981 taaattaagtaattattttttaaaaatcttaaatttttcaattttcaatgcaataattacgcaaacttctataaaaaagttaccat 37284896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 10183219 - 10183299
Alignment:
Q  53 tttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 133  Q
    ||||||||||||||| ||||||||||  |||||| | |||| ||||||||||||||| | |||| ||||||  ||||||||    
T  10183219 tttaaaaatgtcaaaattttcaatttttaatgcattaattatacaaattttcataaatatttactatttaagatccttaac 10183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 9153581 - 9153494
Alignment:
Q  23 ctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 110  Q
    ||||||| || | |||||||| ||||||| |||||||| | ||||   |||||||||||||||| ||| |||||||||||| ||||||    
T  9153581 ctttaaggattccaaattaagaaattattctttaaaaaaggcaaacacttcaatttccaatgcattgaatacacaaatttttataaaa 9153494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 15806105 - 15806054
Alignment:
Q  65 aaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  15806105 aaagttttcaattttcaatgcattgattacacaaacttttataaaaagttac 15806054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 41543970 - 41544065
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgt-caaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||||||||||||| ||||||| | ||||||| ||||||||  | ||||   |||||||||||||||| ||| |||| || ||||||||||||    
T  41543970 ggcattctttaagcatattaaattaggaaattattctttaaaaaaattcaaatagttcaatttccaatgcaatgaatacataatttttcataaaaa 41544065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 3666533 - 3666431
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 134  Q
    ||||||||||||||||| ||||||||| | ||| |||| ||||  |||| || |||||||| ||| ||||||||||| |||  ||||||  || ||||||    
T  3666533 taaattaagtaattattctttaaaaatattaaaatttttaattctcaatacattgattacataaactttcataaaaaattattatttaagatctttaact 3666434  T
Q  135 agt 137  Q
    |||    
T  3666433 agt 3666431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 6761801 - 6761731
Alignment:
Q  55 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 125  Q
    |||||| ||||||  ||||||||||||||||| |||||||| ||||||||| |||||| |||  |||||||    
T  6761801 taaaaaagtcaaatatttcaatttccaatgcattgattacataaattttcaaaaaaagatacattttaaag 6761731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 33898685 - 33898643
Alignment:
Q  90 attacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  33898685 attacacaaatttttataaaaagttaccatttaaggtccttaa 33898643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 39647881 - 39647767
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||| ||| |||||||||||||||||||||||||||| | ||   |||  ||||||||  |  ||||| |||||| ||| ||||||| ||  || ||    
T  39647881 tctttaaacattctaaattaagtaattattttttaaaaatattaagacttttgatttccaaaacgttgattgcacaaaattttataaaaaattgtcaatt 39647782  T
Q  122 aaagtccttaactag 136  Q
    |||||||||||||||    
T  39647781 aaagtccttaactag 39647767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 7271831 - 7271880
Alignment:
Q  75 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||||||||||| |||||||| | ||||||||||||||||| ||||||||    
T  7271831 atttccaatgcattgattacatatattttcataaaaagttatcatttaaa 7271880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 8086966 - 8087051
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 120  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||  |||| || ||| ||| ||| ||| ||||||| ||| ||||    
T  8086966 taaattaaataattattttttaaaaatgttaaacttttcaatttttaatgtaccgataacataaacttttataaaaatttaacatt 8087051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 8333665 - 8333580
Alignment:
Q  39 ttaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 124  Q
    ||||||||||||| ||||| || ||||||  ||||||||  |||||||  || |||||||||||| ||||||| ||||||| ||||    
T  8333665 ttaagtaattattctttaataaagtcaaacatttcaattctcaatgcatcgaatacacaaatttttataaaaacttaccatctaaa 8333580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 44941189 - 44941072
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    |||||||| || |||||  ||| || ||| || |||||| || |||| |||| |||||| ||||| |||||||| | |||||| | | || |||||||||    
T  44941189 tctttaaggattctaaaagaagaaagtatgttataaaaaagttaaagatttcgatttccgatgcattgattacatatattttcctgataaattaccattt 44941090  T
Q  122 aaagtccttaactagtgc 139  Q
    |||| |||||||||||||    
T  44941089 aaaggccttaactagtgc 44941072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 814996 - 815088
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    ||||||||| | ||||| || ||||||||||||||||  |||||  |  ||| |||||||||| |||||||||  ||||||||||||| ||||    
T  814996 tttaagcatcccaaatttagaaattattttttaaaaaaatcaaatgtcacaaattccaatgcattgattacaccgattttcataaaaacttac 815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 18684365 - 18684453
Alignment:
Q  27 aagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 115  Q
    |||||| |||||||| | | ||||| |||||||| |||| |   |||||||||||||| | | | ||||||||||||||||||||||||    
T  18684365 aagcatgctaaattaggaagttattctttaaaaaagtcatacaattcaatttccaatgtattaaatacacaaattttcataaaaagtta 18684453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 33963036 - 33962932
Alignment:
Q  37 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 136  Q
    ||||||| ||||||| |||||||| ||  ||   |||||||| ||||||| ||| | ||||| |||||||||||| |||  |||||||||||||||  ||    
T  33963036 aattaagaaattattctttaaaaaagtttaacacttcaattttcaatgcattgaatgcacaatttttcataaaaatttattatttaaagtccttaaagag 33962937  T
Q  137 tgccc 141  Q
    |||||    
T  33962936 tgccc 33962932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 44838626 - 44838730
Alignment:
Q  34 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtccttaa 132  Q
    |||||| ||||||||||| ||| ||||| | |||   |||||||| |||| || |||||||||||| ||| || |||||||||  |||||| ||||||||    
T  44838626 ctaaataaagtaattattcttttaaaatttaaaaaaattcaattttcaatacattgattacacaaacttttataaaaaagttattatttaaggtccttaa 44838725  T
Q  133 ctagt 137  Q
    |||||    
T  44838726 ctagt 44838730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 19890295 - 19890208
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||||| ||||||| |||||||||| ||| |||| |||||   || |||||||||||||| | | ||||||| ||||||| ||||    
T  19890295 tttaagcatcctaaatttagtaattattcttttaaaaagtcaactattacaatttccaatgcatttaatacacaacttttcattaaaa 19890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 25622532 - 25622618
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    ||||||| ||| |||||||||||||||| ||||||||||| |||||  || |||||| ||||||| | |||||| |  ||||||||||    
T  25622532 tctttaaacattctaaattaagtaatta-tttttaaaaatatcaaatattacaattttcaatgcattaattacatattttttcataaa 25622618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 37313775 - 37313700
Alignment:
Q  24 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 99  Q
    |||||||||  |||||||||||||| || ||||||||  ||||| |||| |||||  |||||||| ||||||||||    
T  37313775 tttaagcattttaaattaagtaatttttctttaaaaaaatcaaaatttttaatttgtaatgcactaattacacaaa 37313700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 16944811 - 16944873
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||| ||| ||||    
T  16944811 tttcaattttcaatgtattgaatacacaaatttttataaaaacttaccatttaacgtctttaa 16944873  T

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Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 17015476 - 17015538
Alignment:
Q  70 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 132  Q
    ||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||| ||| ||||    
T  17015476 tttcaattttcaatgtattgaatacacaaatttttataaaaacttaccatttaacgtctttaa 17015538  T

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Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 19495215 - 19495288
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 109  Q
    ||||||||||||||||| ||| |||| ||||||  |||| |||||||||||| |||||||||  ||||| |||||    
T  19495215 taaattaagtaattattattttaaaa-gtcaaatatttcgatttccaatgcattgattacacccatttttataaa 19495288  T

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Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 32859778 - 32859872
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    |||| ||||||| ||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||||    
T  32859778 ggcactctttaaacatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaagttttcataaaaa 32859872  T

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Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 11364702 - 11364739
Alignment:
Q  88 tgattacacaaattttcataaaaagttaccatttaaag 125  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  11364702 tgattatacaaatttttataaaaagttaccatttaaag 11364739  T

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Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 14368577 - 14368638
Alignment:
Q  278 agtctttcccccatttctatggagacctattccttctcgaattggaatagttatctgtatca 339  Q
    |||||||||  | ||| ||||||||||| |||||||| ||||||||||| |||| |||||||    
T  14368577 agtctttccttcgtttttatggagacctgttccttcttgaattggaataattatatgtatca 14368638  T

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Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 32787623 - 32787586
Alignment:
Q  88 tgattacacaaattttcataaaaagttaccatttaaag 125  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  32787623 tgattacacaaattttcatataaagttatcatttaaag 32787586  T

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Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 1334997 - 1334881
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagtta 115  Q
    |||| ||||||||||| | ||||| | |||||||| ||||||||  ||||   || |||||||||||||| | | || |||| |||||| |||||| |||    
T  1334997 ggcactctttaagcatcccaaatttaataattattctttaaaaaaatcaactattacaatttccaatgcattcaatatacaatttttcattaaaaactta 1334898  T
Q  116 ccatttaaagtccttaa 132  Q
     |||||||||| |||||    
T  1334897 tcatttaaagtgcttaa 1334881  T

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Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 21004775 - 21004811
Alignment:
Q  88 tgattacacaaattttcataaaaagttaccatttaaa 124  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  21004775 tgattacacaaattttcaaaaaaaattaccatttaaa 21004811  T

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Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 42924525 - 42924425
Alignment:
Q  22 tctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 121  Q
    ||||||||||| |||||  |||||||||||||| |||||  |||||  ||||||||| ||| | | ||||||||   ||||||||||| | |||| ||||    
T  42924525 tctttaagcattctaaaagaagtaattatttttaaaaaaaatcaaatatttcaattttcaacgtattgattacatgcattttcataaatatttactattt 42924426  T
Q  122 a 122  Q
    |    
T  42924425 a 42924425  T

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Target: scaffold0010 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 26694 - 26793
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 116  Q
    |||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  26694 ggcactctttaagcatgctaaattaagtaattattattttaaaatgtcaaagttttcaattttcaatgcactgattacacaaactttcgtaaaaagttac 26793  T

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Target: scaffold0236 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 19578 - 19686
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 134  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||  |||  |  ||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  19578 taaattaagtaattattctttaaaaatgttaaagttttcaatttttaatatatcgattacacaaattttcataaaaagttatcatttaaggtctttaact 19677  T
Q  135 agtgcccca 143  Q
    |||||||||    
T  19678 agtgcccca 19686  T

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Target: scaffold0037 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 35274 - 35376
Alignment:
Q  35 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 134  Q
    ||||| ||||||||||||||||||| ||| ||| |||||||||| || |||| |||||||| ||| ||||||||||| |||| || ||| ||||||||||    
T  35274 taaatcaagtaattattttttaaaa-tgttaaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatgtccttaact 35372  T
Q  135 agtg 138  Q
    ||||    
T  35373 agtg 35376  T

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Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 5755 - 5816
Alignment:
Q  17 ggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaattt 78  Q
    |||| |||||||| ||  |||||||||||||| || ||||||||||||||||||||||||||    
T  5755 ggcactctttaagaattttaaattaagtaatttttctttaaaaatgtcaaagttttcaattt 5816  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 219185 - 219277
Alignment:
Q  19 cattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 111  Q
    ||||||||||||||  ||||||| | ||||||| |||| ||| ||||||   |||||||||||||||| | | |||| | ||||| |||||||    
T  219185 cattctttaagcattttaaattaggaaattattctttacaaaagtcaaatagttcaatttccaatgcattaaatacatatatttttataaaaa 219277  T

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