View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12241_high_1 (Length: 1050)
Name: NF12241_high_1
Description: NF12241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12241_high_1 |
 | |
|
| [»] scaffold1961 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 773; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 773; E-Value: 0
Query Start/End: Original strand, 17 - 1041
Target Start/End: Original strand, 15194852 - 15195876
Alignment:
| Q |
17 |
cataaaagctctttatcgggtctagagatgtgttcatgtcggtaaacatgccctctaattttgcagtaaattggtatccacattctgtcttcatcttagc |
116 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||| | |||||| |
|
|
| T |
15194852 |
cataaaagctcttcatcgggtgtagagatgttttcatgtctgttaacatgccctctaattttgcagtaaattcgtatccacattctgtcttgagcttagc |
15194951 |
T |
|
| Q |
117 |
tatgagactcctctcggcatcatcagaaactgtttttccacacaaaagccgctttgcaaggtgctgtttgtaatacttctcaaacacatctttttcctgc |
216 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15194952 |
tatgagactccgctcggcatcatcagaaactgtttttccagacaaaagccgctttgcaaggtgctttttgtaatacttctcaaacacatctttttcctgc |
15195051 |
T |
|
| Q |
217 |
aaataacggaataaaaccataaccttgttaagagtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtctataaatagtg |
316 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
15195052 |
aaataacggaataaaaacataaccttgttaagagtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtttaaaaatagtg |
15195151 |
T |
|
| Q |
317 |
atatgtactctggagaacgaggattcaagttaatgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttat |
416 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15195152 |
aaatgtactctggagaacgaggattcaagttaatgataaattcgaaggaggaatacagatctttctggaacaacttgtcattactaaatgccaaatttat |
15195251 |
T |
|
| Q |
417 |
aatcctgttgaatttatctttctcatctaagagcttctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttaccatagtct |
516 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15195252 |
aatcctgctgaatttatctttctcatctaaaagcctctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttactgtagtct |
15195351 |
T |
|
| Q |
517 |
ctaatgtatgaagtcatcacttctcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcac |
616 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15195352 |
ctaatgtatgaagtaatcacttctcgtatttgcgagagaccaccggtgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcac |
15195451 |
T |
|
| Q |
617 |
caatcatgtttactaacccagaattctccatatggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagt |
716 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15195452 |
caatcatgtttactaacccagagttctccataaggattaatctaatcatgtgattttcgatcatctccttctccaccacaatagtaatcttcttttgagt |
15195551 |
T |
|
| Q |
717 |
gctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttc |
816 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15195552 |
gctagggtcccagaagtggctcactctatcaattacctcattcaggcgcatctcagccttcttgagataatccccacaatcacagcactcaataaatttc |
15195651 |
T |
|
| Q |
817 |
tgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgtta |
916 |
Q |
| |
|
||||||||||| ||||||||||| | || ||| ||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
15195652 |
tgtgattcagcccggtagaactcggctggaagctgcagaaaaggattctcaaattcttgcacataaacggaaggtcctaaatccattagcatatttgtta |
15195751 |
T |
|
| Q |
917 |
tatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaata |
1016 |
Q |
| |
|
|||||||||||| |||| | |||| |||||| ||||||||| ||||||||||| | || ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15195752 |
tatttctaatcacttttatgttaacaacttctccagcatagtacttgcatactaattcccaaagcgtattcgacaatcgagtccttatctggtttgaata |
15195851 |
T |
|
| Q |
1017 |
aataacattttctctccacaggttc |
1041 |
Q |
| |
|
|||||||||||| |||||||||||| |
|
|
| T |
15195852 |
aataacattttcgctccacaggttc |
15195876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 773; E-Value: 0
Query Start/End: Original strand, 17 - 1041
Target Start/End: Original strand, 15215270 - 15216294
Alignment:
| Q |
17 |
cataaaagctctttatcgggtctagagatgtgttcatgtcggtaaacatgccctctaattttgcagtaaattggtatccacattctgtcttcatcttagc |
116 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||| | |||||| |
|
|
| T |
15215270 |
cataaaagctcttcatcgggtgtagagatgttttcatgtctgttaacatgccctctaattttgcagtaaattcgtatccacattctgtcttgagcttagc |
15215369 |
T |
|
| Q |
117 |
tatgagactcctctcggcatcatcagaaactgtttttccacacaaaagccgctttgcaaggtgctgtttgtaatacttctcaaacacatctttttcctgc |
216 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15215370 |
tatgagactccgctcggcatcatcagaaactgtttttccagacaaaagccgctttgcaaggtgctttttgtaatacttctcaaacacatctttttcctgc |
15215469 |
T |
|
| Q |
217 |
aaataacggaataaaaccataaccttgttaagagtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtctataaatagtg |
316 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
15215470 |
aaataacggaataaaaacataaccttgttaagagtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtttaaaaatagtg |
15215569 |
T |
|
| Q |
317 |
atatgtactctggagaacgaggattcaagttaatgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttat |
416 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15215570 |
aaatgtactctggagaacgaggattcaagttaatgataaattcgaaggaggaatacagatctttctggaacaacttgtcattactaaatgccaaatttat |
15215669 |
T |
|
| Q |
417 |
aatcctgttgaatttatctttctcatctaagagcttctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttaccatagtct |
516 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15215670 |
aatcctgctgaatttatctttctcatctaaaagcctctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttactgtagtct |
15215769 |
T |
|
| Q |
517 |
ctaatgtatgaagtcatcacttctcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcac |
616 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15215770 |
ctaatgtatgaagtaatcacttctcgtatttgcgagagaccaccggtgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcac |
15215869 |
T |
|
| Q |
617 |
caatcatgtttactaacccagaattctccatatggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagt |
716 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15215870 |
caatcatgtttactaacccagagttctccataaggattaatctaatcatgtgattttcgatcatctccttctccaccacaatagtaatcttcttttgagt |
15215969 |
T |
|
| Q |
717 |
gctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttc |
816 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15215970 |
gctagggtcccagaagtggctcactctatcaattacctcattcaggcgcatctcagccttcttgagataatccccacaatcacagcactcaataaatttc |
15216069 |
T |
|
| Q |
817 |
tgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgtta |
916 |
Q |
| |
|
||||||||||| ||||||||||| | || ||| ||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
15216070 |
tgtgattcagcccggtagaactcggctggaagctgcagaaaaggattctcaaattcttgcacataaacggaaggtcctaaatccattagcatatttgtta |
15216169 |
T |
|
| Q |
917 |
tatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaata |
1016 |
Q |
| |
|
|||||||||||| |||| | |||| |||||| ||||||||| ||||||||||| | || ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15216170 |
tatttctaatcacttttatgttaacaacttctccagcatagtacttgcatactaattcccaaagcgtattcgacaatcgagtccttatctggtttgaata |
15216269 |
T |
|
| Q |
1017 |
aataacattttctctccacaggttc |
1041 |
Q |
| |
|
|||||||||||| |||||||||||| |
|
|
| T |
15216270 |
aataacattttcgctccacaggttc |
15216294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 395 - 1038
Target Start/End: Original strand, 15195881 - 15196524
Alignment:
| Q |
395 |
cattactaaatgccaaatttataatcctgttgaatttatctttctcatctaagagcttctgcacaaattcaaccggattcttcaacctttctggatcagt |
494 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15195881 |
cattactaaatgccaaatttataatcctgctgaatttatctttctcatctaagagcctctgcacaaattcaaccggattcttcaacctttctggaccagt |
15195980 |
T |
|
| Q |
495 |
aacaagctgcttaccatagtctctaatgtatgaagtcatcacttctcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactc |
594 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
15195981 |
aacaagctgcttaccatagtctctaatgtatgaagtcatcacttctcgtatttgcgagagaccaccggtgacacgacggaacaagttatacattctaatc |
15196080 |
T |
|
| Q |
595 |
aaatcttcatacttatcatcaccaatcatgtttactaacccagaattctccatatggactaatctaagcatgtgattatcgatcatctccttctccacca |
694 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15196081 |
aaatctttatacttatcatcaccaatcatgtttactaacccagagttctccatatggattaatctaagcatgtgattttcgatcatctccttctccacca |
15196180 |
T |
|
| Q |
695 |
caatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccaca |
794 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||| |||||| |||||||| |||||||||||||| |
|
|
| T |
15196181 |
caatagtaatcttcttttgagtgctagggtccaagaagtggctcactttatcaattacctcattcaggcgcatctcagccttctttagataatccccaca |
15196280 |
T |
|
| Q |
795 |
atcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacct |
894 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15196281 |
atcatagcgctcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacct |
15196380 |
T |
|
| Q |
895 |
aaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatc |
994 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||||| || |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
15196381 |
aaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatc |
15196480 |
T |
|
| Q |
995 |
gagtccttatctggtttgaataaataacattttctctccacagg |
1038 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15196481 |
gagtccttatctggtttgaataaataacattttctctccacagg |
15196524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 395 - 1038
Target Start/End: Original strand, 15216299 - 15216942
Alignment:
| Q |
395 |
cattactaaatgccaaatttataatcctgttgaatttatctttctcatctaagagcttctgcacaaattcaaccggattcttcaacctttctggatcagt |
494 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15216299 |
cattactaaatgccaaatttataatcctgctgaatttatctttctcatctaagagcctctgcacaaattcaaccggattcttcaacctttctggaccagt |
15216398 |
T |
|
| Q |
495 |
aacaagctgcttaccatagtctctaatgtatgaagtcatcacttctcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactc |
594 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
15216399 |
aacaagctgcttaccatagtctctaatgtatgaagtcatcacttctcgtatttgcgagagaccaccggtgacacgacggaacaagttatacattctaatc |
15216498 |
T |
|
| Q |
595 |
aaatcttcatacttatcatcaccaatcatgtttactaacccagaattctccatatggactaatctaagcatgtgattatcgatcatctccttctccacca |
694 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15216499 |
aaatctttatacttatcatcaccaatcatgtttactaacccagagttctccatatggattaatctaagcatgtgattttcgatcatctccttctccacca |
15216598 |
T |
|
| Q |
695 |
caatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccaca |
794 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||| |||||| |||||||| |||||||||||||| |
|
|
| T |
15216599 |
caatagtaatcttcttttgagtgctagggtccaagaagtggctcactttatcaattacctcattcaggcgcatctcagccttctttagataatccccaca |
15216698 |
T |
|
| Q |
795 |
atcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacct |
894 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15216699 |
atcatagcgctcaatcaatttctgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacct |
15216798 |
T |
|
| Q |
895 |
aaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatc |
994 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||||| || |||||| ||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
15216799 |
aaatccattagcatatttgttatatatctaatcagttttctatcaacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatc |
15216898 |
T |
|
| Q |
995 |
gagtccttatctggtttgaataaataacattttctctccacagg |
1038 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15216899 |
gagtccttatctggtttgaataaataacattttctctccacagg |
15216942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 573; Significance: 0; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 573; E-Value: 0
Query Start/End: Original strand, 21 - 1041
Target Start/End: Complemental strand, 17564189 - 17563169
Alignment:
| Q |
21 |
aaagctctttatcgggtctagagatgtgttcatgtcggtaaacatgccctctaattttgcagtaaattggtatccacattctgtcttcatcttagctatg |
120 |
Q |
| |
|
||||||||| |||| ||||| |||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||| |
|
|
| T |
17564189 |
aaagctcttcatcgtgtctacagatgttttcatgtctgtaaacatgccctctaattttgcggtaaattggaatccacattctgtcttcagcttaactatg |
17564090 |
T |
|
| Q |
121 |
agactcctctcggcatcatcagaaactgtttttccacacaaaagccgctttgcaaggtgctgtttgtaatacttctcaaacacatctttttcctgcaaat |
220 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17564089 |
agactcctctcagcatcatcagaaactgtttttccagacaaaagccgctttgcaaggtgctgcttgtaatacttctcaaacacatctttttcctgcaaat |
17563990 |
T |
|
| Q |
221 |
aacggaataaaaccataaccttgttaagagtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtctataaatagtgatat |
320 |
Q |
| |
|
| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| ||| ||||| || |
|
|
| T |
17563989 |
accggaatagaaccataaccttgtcaaggataatctctacaacatcctcactaactccctttagaccttttcgaagcttatcgtctacaaagagtgaaat |
17563890 |
T |
|
| Q |
321 |
gtactctggagaacgaggattcaagttaatgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttataatc |
420 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
17563889 |
gtactctggaatacgaggattcaagttcatgaaaaattcaaatgaggaattcagatctttcatgaacaacttgtcattactaaatgccaaatctataatc |
17563790 |
T |
|
| Q |
421 |
ctgttgaatttatctttctcatctaagagcttctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttaccatagtctctaa |
520 |
Q |
| |
|
||||||||||||||||| ||||| ||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| | |||| | | |
|
|
| T |
17563789 |
ttgttgaatttatctttcacatctgagagcctctgcacaaattcaacaggatccttcaacctttcaggatcagtaacaagctgcttaccgtggtctttga |
17563690 |
T |
|
| Q |
521 |
tgtatgaagtcatcacttctcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaat |
620 |
Q |
| |
|
|||||||||||||||||| ||||||| | |||||| || ||||||||| ||||||||||||||| |||| |||||||||||| ||||||||||||| |
|
|
| T |
17563689 |
cgtatgaagtcatcacttcacgtattttcaagagaccatcggtgacacgactgaacaagttatacatcctacccaaatcttcatatttatcatcaccaag |
17563590 |
T |
|
| Q |
621 |
catgtttactaacccagaattctccatatggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgcta |
720 |
Q |
| |
|
||||||||||||||||||| ||||| ||| || |||||||||||||||||| |||| ||||||||||||||||| | ||||||||||| ||| ||||||| |
|
|
| T |
17563589 |
catgtttactaacccagaagtctccttatagattaatctaagcatgtgattttcgagcatctccttctccaccagagtagtaatcttcgtttcagtgcta |
17563490 |
T |
|
| Q |
721 |
gtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtg |
820 |
Q |
| |
|
| ||| ||| |||||||||||||||||| | || ||||||| |||||| ||||||||||||||||||||| || ||||||||||||| ||| |||||| |
|
|
| T |
17563489 |
gggtccaagtagtggctcactctatcaagttcctcattcagatgcatctcagccttcttgagataatccccagaaccacagcactcaataaatatctgtg |
17563390 |
T |
|
| Q |
821 |
attcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatt |
920 |
Q |
| |
|
||||||| || ||||||||||||||| | |||| ||||||||| ||||||||| | |||||||||||||||| ||| |||||||| || |||||| | |
|
|
| T |
17563389 |
attcagcccgatagaactcagttgaagctagcagaaaaggattctcaaattcttccccataaacggaaggacctgtatcaattagcatctttgttatact |
17563290 |
T |
|
| Q |
921 |
tctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaata |
1020 |
Q |
| |
|
|||||||||| |||||||| |||||| | ||| || ||| ||||| | |||||||||||||| ||| ||||||||||||||||||||||| || | |
|
|
| T |
17563289 |
tctaatcagtcctctattaacaacttcgccggcacgctcactgcgtactaattccaaaagcatattcaacagtcgagtccttatctggtttgaatgaaga |
17563190 |
T |
|
| Q |
1021 |
acattttctctccacaggttc |
1041 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
17563189 |
acattttctctccacaggttc |
17563169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 428 - 1041
Target Start/End: Complemental strand, 17570881 - 17570265
Alignment:
| Q |
428 |
atttatctttctcatctaagagcttctgcacaaattcaaccggattctt---caacctttctggatcagtaacaagctgcttaccatagtctctaatgta |
524 |
Q |
| |
|
||||||||||||||||||| | | |||||||||||||||| || | | |||||||||| ||||||||| |||||| || | ||||| |||| |
|
|
| T |
17570881 |
atttatctttctcatctaacaacctctgcacaaattcaacatgaatatcatccaacctttctagatcagtaagaagctgtttcaaggactctctgatgtg |
17570782 |
T |
|
| Q |
525 |
tgaagtcatcacttctcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatg |
624 |
Q |
| |
|
||||||| ||||||| ||||||| || |||||| | |||||||| ||||||||||||||||| | |||||||||||| |||||| ||| || |||| |
|
|
| T |
17570781 |
tgaagtcgtcacttcacgtattttcgagagaccattagtaacacgacgaaacaagttatacattcttcccaaatcttcatatttatcaccacaaagcatg |
17570682 |
T |
|
| Q |
625 |
tttactaacccagaattctccatatggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtgt |
724 |
Q |
| |
|
||||||||||| || ||||||||||||| |||||||||||||||||| || |||||||||||||| | |||| ||||||||||||||| |||||||| || |
|
|
| T |
17570681 |
tttactaaccccgagttctccatatggattaatctaagcatgtgattttcaatcatctccttctcgatcacactagtaatcttcttttcagtgctagggt |
17570582 |
T |
|
| Q |
725 |
cgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattc |
824 |
Q |
| |
|
| ||| |||||| || |||||| || || ||||||||| | |||| | |||||||||||||| || |||||||||||||| || |||||||| ||||| |
|
|
| T |
17570581 |
ccaagtagtggcacattctatctgtttcctcattcaggcacctctcaactttcttgagataatcaccgcaatcacagcactcgataaatttctgagattc |
17570482 |
T |
|
| Q |
825 |
agcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttcta |
924 |
Q |
| |
|
||| | ||||||||||| ||||| ||| || || | | || | ||||||||| |||||| |||| |||||||||||||||||| || || |||||| || |
|
|
| T |
17570481 |
agccctgtagaactcagctgaaacttgtagaaacgaagtctcgaattcttgctcataaacagaagaacctaaatccattagcatctttgtaatattttta |
17570382 |
T |
|
| Q |
925 |
atcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacat |
1024 |
Q |
| |
|
||||||| | |||||| | ||||| ||||| ||||||||||||| | |||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |
|
|
| T |
17570381 |
atcagttctatattaacatcttccccagcacgttccttgcatactaattccaaaagcatattcgacagtcgagtcctgatctgttttgagtaaataacat |
17570282 |
T |
|
| Q |
1025 |
tttctctccacaggttc |
1041 |
Q |
| |
|
| ||| ||||||||||| |
|
|
| T |
17570281 |
tctctgtccacaggttc |
17570265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 340 - 1041
Target Start/End: Original strand, 17683412 - 17684110
Alignment:
| Q |
340 |
ttcaagttaatgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttataatcctgttgaatttatctttct |
439 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| | | | ||| |||| |||||||||||||||||||||| ||||||||| ||| | |||||||||| | |
|
|
| T |
17683412 |
ttcaagttagtgaaaaattcaaataaggaattaaaagcattccggaaaaacttgtcattactaaatgccatgtttataatcttgtcgtatttatctttgt |
17683511 |
T |
|
| Q |
440 |
catctaagagcttctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttaccatagtctctaatgtatgaagtcatcacttc |
539 |
Q |
| |
|
|||| || ||| |||||| ||||||||| |||| || |||||| | ||||||||||||||||| | | | | ||| ||||| ||| ||||| |||| |
|
|
| T |
17683512 |
catccaatagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtgagatcatcgcttc |
17683611 |
T |
|
| Q |
540 |
tcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgtttactaacccagaa |
639 |
Q |
| |
|
| |||||| ||| |||||| | || ||||||||||||||||||||||| |||||||||||| |||| | ||| || ||||||||| |||||||| |
|
|
| T |
17683612 |
ttgtatttttgagagaccatcaggaacccgacggaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgtttacaaacccagag |
17683711 |
T |
|
| Q |
640 |
ttctccatatggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctca |
739 |
Q |
| |
|
|||||||||| || |||||| |||||| |||| || |||||||||||||| | | || || |||| ||||||| ||| ||| ||| ||| | || | |
|
|
| T |
17683712 |
ttctccatattgattaatctcagcatgggattttcaatcatctccttctcgatcgcattaataattttcttttcagtcttagggtccaagtaatgaat-- |
17683809 |
T |
|
| Q |
740 |
ctctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactc |
839 |
Q |
| |
|
|||||| || || ||||||||| | |||| | ||||||||||||||||| || ||||| ||||| || |||||| |||||||| ||| | || |
|
|
| T |
17683810 |
-tctatccgtttcctcattcaggcacctctcaactttcttgagataatccccgcagtcacaacactcgatatatttctcggattcagccttgtaagattc |
17683908 |
T |
|
| Q |
840 |
agttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctatta |
939 |
Q |
| |
|
|| | ||| |||||| |||||| || ||||||||||| |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| ||| |
|
|
| T |
17683909 |
agctaaaacttgcagaaaaggagtctcaaattcttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgtta |
17684008 |
T |
|
| Q |
940 |
aaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggt |
1039 |
Q |
| |
|
| | ||||| | ||| | ||||| |||| | |||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
17684009 |
acatcttccccggcacactccttaaatacaaactccaaaagcgtattcgacagttgagtccttatctggtttgaataaataacaatttctctccacaggt |
17684108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 565 - 1041
Target Start/End: Original strand, 17690563 - 17691036
Alignment:
| Q |
565 |
acacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgtttactaacccagaattctccatatggactaatctaagca |
664 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||| ||| | ||| |||||||||||| |||||||| |||||||||| || ||||||| ||| |
|
|
| T |
17690563 |
acacgtcggaacaagttatacattctttccaaatcttcatatttagtaccacaaatcatgtttacaaacccagagttctccatattgattaatctaggca |
17690662 |
T |
|
| Q |
665 |
tgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggct |
764 |
Q |
| |
|
|| |||| || |||||||||||||| | | || || |||| ||||||| ||| ||| ||| ||| | || |||||||| || || |||||| || |
|
|
| T |
17690663 |
tgggattttcaatcatctccttctcgatcgcattaataattttcttttcagtcttagggtccaagtaatga---actctatccgtttcctcattcaagca |
17690759 |
T |
|
| Q |
765 |
catctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattc |
864 |
Q |
| |
|
| |||| | |||||||||||||||||||| ||| | |||| ||| ||||||| |||||||| ||| | |||| | ||| |||||| |||||| || |
|
|
| T |
17690760 |
cctctcaactttcttgagataatccccacagtcaaaacacttaatatatttctgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtc |
17690859 |
T |
|
| Q |
865 |
acaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgc |
964 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| |||| | ||||| | ||| |||||| |
|
|
| T |
17690860 |
tcaaatacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttga |
17690959 |
T |
|
| Q |
965 |
atactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc |
1041 |
Q |
| |
|
|||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17690960 |
atacaaactccaaaagcatattcgacaatcgattccttatctggtttgaataaataacattttctctccacaggttc |
17691036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 565 - 841
Target Start/End: Original strand, 17621843 - 17622119
Alignment:
| Q |
565 |
acacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgtttactaacccagaattctccatatggactaatctaagca |
664 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||| |||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
17621843 |
acacgacggaacaagttatacattctacccaagtcttcatatttatcaccacaaatcatgtttactaacccagaattttccatatggattaatctaagca |
17621942 |
T |
|
| Q |
665 |
tgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggct |
764 |
Q |
| |
|
||| ||| || || ||||||||| |||||| | ||| ||| ||| || || |||| || || | ||| |||||||||| | | || ||||||| | |
|
|
| T |
17621943 |
tgtcattttcaataatctccttcaccaccatattagcaatagtctctttggtcctaggatccaaataatggttcactctatccaattcctcattcagccg |
17622042 |
T |
|
| Q |
765 |
catctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcag |
841 |
Q |
| |
|
| |||| || |||||||||||||||||||||||||| || |||| |||||||| | ||| || | ||||||||||| |
|
|
| T |
17622043 |
cctctcagctttcttgagataatccccacaatcacaacatccaataaatttctgagtttctgccctgtagaactcag |
17622119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 36 - 255
Target Start/End: Original strand, 17621438 - 17621656
Alignment:
| Q |
36 |
gtctagagatgtgttcatgtcggtaaacatgccctctaattttgcagtaaattggtatccacattctgtcttcatcttagctatgagactcctctcggca |
135 |
Q |
| |
|
||||||||| || ||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||| | |||| |||||||||||||| || |
|
|
| T |
17621438 |
gtctagagaagttttcatatctgtaaacatgccctctaattttgaggtaaaatggtatccacattctgtcttgagcttaatgatgagactcctctcagcg |
17621537 |
T |
|
| Q |
136 |
tcatcagaaactgtttttccacacaaaagccgctttgcaaggtgctgtttgtaatacttctcaaacacatctttttcctgcaaataacggaataaaacca |
235 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| |||| || ||| ||||||||||||||||||||| || ||||| ||||| || |||||| | || |
|
|
| T |
17621538 |
tcatcagaaactgtttttccagacaaaatccgcattgccagatgcagtttgtaatacttctcaaacaagtc-ttttcttgcaagtattggaatagcatca |
17621636 |
T |
|
| Q |
236 |
taaccttgttaagagtaatc |
255 |
Q |
| |
|
| ||||||| |||||||||| |
|
|
| T |
17621637 |
tcaccttgtcaagagtaatc |
17621656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 246 - 419
Target Start/End: Complemental strand, 17571772 - 17571599
Alignment:
| Q |
246 |
aagagtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtctataaatagtgatatgtactctggagaacgaggattcaag |
345 |
Q |
| |
|
|||||||||||||||| ||||||| |||| ||||||||| | ||| |||||||||||||| ||||||||| |||||||||||||||| ||| |||||| |
|
|
| T |
17571772 |
aagagtaatctctacatcatcctcgctaactccctttagttcctttctaagcttatcgtctacaaatagtgaaatgtactctggagaacaagggttcaag |
17571673 |
T |
|
| Q |
346 |
ttaatgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttataat |
419 |
Q |
| |
|
|||||||||||||| || |||||||||| | | || ||||| || |||| ||| |||||| |||| |||||||| |
|
|
| T |
17571672 |
ttaatgaaaaattcgaacgaggaattcaaagcattttggaagaaattgttatttctaaattccaagtttataat |
17571599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 849 - 1041
Target Start/End: Original strand, 17702002 - 17702194
Alignment:
| Q |
849 |
ttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcc |
948 |
Q |
| |
|
|||||| |||||| || ||||| ||||| |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| |||| | ||||| |
|
|
| T |
17702002 |
ttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttcc |
17702101 |
T |
|
| Q |
949 |
tcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc |
1041 |
Q |
| |
|
| ||| || || ||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17702102 |
ccggcacgctctttaagtacaaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc |
17702194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 391 - 489
Target Start/End: Original strand, 17621700 - 17621798
Alignment:
| Q |
391 |
ttgtcattactaaatgccaaatttataatcctgttgaatttatctttctcatctaagagcttctgcacaaattcaaccggattcttcaacctttctgga |
489 |
Q |
| |
|
||||| || |||||||||| ||||||||| | | | |||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |
|
|
| T |
17621700 |
ttgtcgttgctaaatgccatgtttataatcttctcgtatttatctttctcatctaagagcttctgcacatattcaacaggatccttcaacctttctgga |
17621798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 553; Significance: 0; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 21 - 1041
Target Start/End: Original strand, 14764410 - 14765430
Alignment:
| Q |
21 |
aaagctctttatcgggtctagagatgtgttcatgtcggtaaacatgccctctaattttgcagtaaattggtatccacattctgtcttcatcttagctatg |
120 |
Q |
| |
|
||||||||| |||| ||||| |||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||| |
|
|
| T |
14764410 |
aaagctcttcatcgtgtctacagatgttttcatgtctgtaaacatgccctctaattttgcggtaaattggaatccacattctgtcttcagcttaactatg |
14764509 |
T |
|
| Q |
121 |
agactcctctcggcatcatcagaaactgtttttccacacaaaagccgctttgcaaggtgctgtttgtaatacttctcaaacacatctttttcctgcaaat |
220 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14764510 |
agactcctctcagcatcatcagaaactgtttttccagacaaaagtcgctttgcaaggtgctgcttgtaatacttctcaaacacatctttttcctgcaaat |
14764609 |
T |
|
| Q |
221 |
aacggaataaaaccataaccttgttaagagtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtctataaatagtgatat |
320 |
Q |
| |
|
| ||||||| |||||||||||||| ||| |||| ||||||||||||||||||| |||||||||||| ||| ||||||||||||||| ||| ||||| || |
|
|
| T |
14764610 |
accggaatagaaccataaccttgtcaaggttaatttctacaacatcctcactaactccctttagaccttttcgaagcttatcgtctacaaagagtgaaat |
14764709 |
T |
|
| Q |
321 |
gtactctggagaacgaggattcaagttaatgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttataatc |
420 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14764710 |
gtactctggaatacgaggattcaagttcatgaaaaattcaaatgaggaattcagatctttcatgaacaacttgtcattactaaatgccaaatctataatc |
14764809 |
T |
|
| Q |
421 |
ctgttgaatttatctttctcatctaagagcttctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttaccatagtctctaa |
520 |
Q |
| |
|
||||||||||||||||| ||||| ||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| | |||| | | |
|
|
| T |
14764810 |
ttgttgaatttatctttcacatctgagagcctctgcacaaattcaacaggatccttcaacctttcaggatcagtaacaagctgcttaccgttgtctttga |
14764909 |
T |
|
| Q |
521 |
tgtatgaagtcatcacttctcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaat |
620 |
Q |
| |
|
||||||||||||||||| ||||||| | |||||| || ||||||||| ||||||||||||||| |||| |||||||||||| ||||||||||||| |
|
|
| T |
14764910 |
cttatgaagtcatcacttcacgtattttcaagagaccatcggtgacacgactgaacaagttatacatcctacccaaatcttcatatttatcatcaccaag |
14765009 |
T |
|
| Q |
621 |
catgtttactaacccagaattctccatatggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgcta |
720 |
Q |
| |
|
||||||||||||||||||| ||||| ||| || |||||||||||||||||| |||| ||||||||||||||||| | ||||||| ||| ||| ||||||| |
|
|
| T |
14765010 |
catgtttactaacccagaagtctccttatagattaatctaagcatgtgattttcgagcatctccttctccaccagagtagtaattttcgtttcagtgcta |
14765109 |
T |
|
| Q |
721 |
gtgtcgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtg |
820 |
Q |
| |
|
| ||| ||| |||||||||||||||||| | || ||||||| |||||| ||||||||||||||||||||| || ||||||||||||| ||| |||||| |
|
|
| T |
14765110 |
gggtccaagtagtggctcactctatcaagttcctcattcagatgcatctcagccttcttgagataatccccagaaccacagcactcaataaatatctgtg |
14765209 |
T |
|
| Q |
821 |
attcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatt |
920 |
Q |
| |
|
||||||| || ||||||||||||||| | |||| ||||||||| ||||||||| | |||||||||||||||| ||| |||||||| || |||||| | |
|
|
| T |
14765210 |
attcagcccgatagaactcagttgaagctagcagaaaaggattctcaaattcttcctcataaacggaaggacctgtatcaattagcatctttgttatact |
14765309 |
T |
|
| Q |
921 |
tctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaata |
1020 |
Q |
| |
|
|||||||||| |||||||| |||||| | ||| || || ||||| | |||||||||||||| ||| ||||||||||||||||||||||| || | |
|
|
| T |
14765310 |
tctaatcagtcctctattaacaacttcgccggcacgctcactgtgtactaattccaaaagcatattcaacagtcgagtccttatctggtttgaatgaaga |
14765409 |
T |
|
| Q |
1021 |
acattttctctccacaggttc |
1041 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
14765410 |
acattttctctccacaggttc |
14765430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 428 - 1041
Target Start/End: Original strand, 14757654 - 14758270
Alignment:
| Q |
428 |
atttatctttctcatctaagagcttctgcacaaattcaaccggattctt---caacctttctggatcagtaacaagctgcttaccatagtctctaatgta |
524 |
Q |
| |
|
||||||||||||||||||| | | |||||||||||||||| || | | |||||||||| ||||||||| |||||| || | ||||| |||| |
|
|
| T |
14757654 |
atttatctttctcatctaacaacctctgcacaaattcaacatgaatatcatccaacctttctagatcagtaagaagctgtttcaaggactctctgatgtg |
14757753 |
T |
|
| Q |
525 |
tgaagtcatcacttctcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatg |
624 |
Q |
| |
|
||||||| ||||||| ||||||| || |||||| | |||||||| ||||||||||||||||| | |||||||||||| |||||| ||| || |||| |
|
|
| T |
14757754 |
tgaagtcgtcacttcacgtattttcgagagaccattagtaacacgacgaaacaagttatacattcttcccaaatcttcatatttatcaccacaaagcatg |
14757853 |
T |
|
| Q |
625 |
tttactaacccagaattctccatatggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtgt |
724 |
Q |
| |
|
||||||||||| || ||||||||||||| |||||||||||||||||| || |||||||||||||| | |||| ||||||||||||||| |||||||| || |
|
|
| T |
14757854 |
tttactaaccccgagttctccatatggattaatctaagcatgtgattttcaatcatctccttctcgatcacactagtaatcttcttttcagtgctagggt |
14757953 |
T |
|
| Q |
725 |
cgaagaagtggctcactctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattc |
824 |
Q |
| |
|
| ||| |||||| || |||||| || || ||||||||| | |||| | |||||||||||||| || |||||||||||||| || |||||||| ||||| |
|
|
| T |
14757954 |
ctaagtagtggcacattctatctgtttcctcattcaggcacctctcaactttcttgagataatcaccgcaatcacagcactcgataaatttctgagattc |
14758053 |
T |
|
| Q |
825 |
agcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttcta |
924 |
Q |
| |
|
||| | ||||||||||| ||||| ||| || || | | || | ||||||||| ||||| |||| |||||||||||||||||| || || |||||| || |
|
|
| T |
14758054 |
agccctgtagaactcagctgaaacttgtagaaacgaagtctcgaattcttgctcttaaacagaagaacctaaatccattagcatctttgtaatattttta |
14758153 |
T |
|
| Q |
925 |
atcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacat |
1024 |
Q |
| |
|
||||||| | |||||| | ||||| ||||| ||||||||||||| | |||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |
|
|
| T |
14758154 |
atcagttctatattaacatcttccccagcacgttccttgcatactaattccaaaagcatattcgacagtcgagtcctgatctgttttgagtaaataacat |
14758253 |
T |
|
| Q |
1025 |
tttctctccacaggttc |
1041 |
Q |
| |
|
| ||| ||||||||||| |
|
|
| T |
14758254 |
tctctgtccacaggttc |
14758270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 17 - 472
Target Start/End: Original strand, 14749357 - 14749812
Alignment:
| Q |
17 |
cataaaagctctttatcgggtctagagatgtgttcatgtcggtaaacatgccctctaattttgcagtaaattggtatccacattctgtcttcatcttagc |
116 |
Q |
| |
|
||||||||| ||| ||| ||||||||| | |||||||| ||| ||| ||||||||||||| |||||||||||||||||||||| |||| | |||| |
|
|
| T |
14749357 |
cataaaagcccttcgtcgtgtctagagaagctttcatgtctttaagcattccctctaattttgaagtaaattggtatccacattctttcttgagcttaat |
14749456 |
T |
|
| Q |
117 |
tatgagactcctctcggcatcatcagaaactgtttttccacacaaaagccgctttgcaaggtgctgtttgtaatacttctcaaacacatctttttcctgc |
216 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| || |||||| ||||||||||||||||||| |||||||| ||| |
|
|
| T |
14749457 |
tatgagactcctctcggcatcttcagaaactgtctttccagccaaaagccgctttgccagatgctgtgtgtaatacttctcaaacacgtctttttcttgc |
14749556 |
T |
|
| Q |
217 |
aaataacggaataaaaccataaccttgttaagagtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtctataaatagtg |
316 |
Q |
| |
|
| || |||||||| | ||| ||||| | |||||||| ||||| | ||||||| |||| ||| |||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
14749557 |
aggtatcggaataacatcatcaccttttcaagagtaacctctaaatcatcctcgctaactccatttagaccctttctaagcttatcgtctacaaatagtg |
14749656 |
T |
|
| Q |
317 |
atatgtactctggagaacgaggattcaagttaatgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttat |
416 |
Q |
| |
|
| |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| | | || ||||||| |||| ||||||||| |||| ||||| |
|
|
| T |
14749657 |
aaatgtactctggagaacaagggttcaagttaatgaaaaattcaaaccaggaattcaaaacattttggaacatattgttgttactaaattccaagtttat |
14749756 |
T |
|
| Q |
417 |
aatcctgttgaatttatctttctcatctaagagcttctgcacaaattcaaccggat |
472 |
Q |
| |
|
|||| ||| | |||||||||||||||| |||||| |||||||||||||||| |||| |
|
|
| T |
14749757 |
aatcttgtcgtatttatctttctcatccaagagcctctgcacaaattcaacaggat |
14749812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 172; E-Value: 7e-92
Query Start/End: Original strand, 340 - 1041
Target Start/End: Complemental strand, 14661849 - 14661151
Alignment:
| Q |
340 |
ttcaagttaatgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttataatcctgttgaatttatctttct |
439 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| | | | ||| | || |||||||||||||||||||||| ||||||||| ||| | |||||||||| | |
|
|
| T |
14661849 |
ttcaagttagtgaaaaattcaaataaggaattaaaagcattccgtaaaaacttgtcattactaaatgccatgtttataatcttgtcgtatttatctttgt |
14661750 |
T |
|
| Q |
440 |
catctaagagcttctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttaccatagtctctaatgtatgaagtcatcacttc |
539 |
Q |
| |
|
|||| |||||| |||||| ||||||||| |||| || |||||| | ||||||||||||||||| | | | | ||| ||||| ||| ||||| |||| |
|
|
| T |
14661749 |
catccaagagcctctgcaaaaattcaacaggatcctccaacctctttggatcagtaacaagcttgtcaacggacactcgaatgtgtgagatcatcgcttc |
14661650 |
T |
|
| Q |
540 |
tcgtatttgtgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgtttactaacccagaa |
639 |
Q |
| |
|
| |||||| | | |||||| | |||||||||||||||||||||||||| |||||||||||| |||| | ||| || ||||||||| |||||||| |
|
|
| T |
14661649 |
ttgtatttttaagagaccatcaggaacacgacggaacaagttatacattctttccaaatcttcatatttattaccacaaagcatgtttacaaacccagag |
14661550 |
T |
|
| Q |
640 |
ttctccatatggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctca |
739 |
Q |
| |
|
|||||||||| || |||||| |||||| |||| || |||||||||||||| | | || || |||| ||||||| ||| ||| ||| ||| | || | |
|
|
| T |
14661549 |
ttctccatattgattaatctcagcatgggattttcaatcatctccttctcgatcgcattaataattttcttttcagtcttagggtccaagtaatgaat-- |
14661452 |
T |
|
| Q |
740 |
ctctatcaattaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactc |
839 |
Q |
| |
|
|||||| || || || |||||| | |||| | ||||||||||||||| | || |||||||||||||| |||||| |||||||| ||| | || |
|
|
| T |
14661451 |
-tctatccgtttcctcagtcaggcacctctcaactttcttgagataatcctcgcagtcacagcactcaatatatttctcagattcagccttgtaagattc |
14661353 |
T |
|
| Q |
840 |
agttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctatta |
939 |
Q |
| |
|
|| | ||| |||||| |||||| || ||||||||||| |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| ||| |
|
|
| T |
14661352 |
agctaaaacttgcagaaaaggagtctcaaattcttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgtta |
14661253 |
T |
|
| Q |
940 |
aaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggt |
1039 |
Q |
| |
|
| | ||||| | ||| |||||| |||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14661252 |
acatcttccccggcacgctccttgaatacaaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggt |
14661153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 459 - 1041
Target Start/End: Complemental strand, 14653295 - 14652716
Alignment:
| Q |
459 |
aaattcaaccggattcttcaacctttctggatcagtaacaagctgcttaccatagtctctaatgtatgaagtcatcacttctcgtatttgtgatagacca |
558 |
Q |
| |
|
||||| ||| |||| ||| | ||||| ||||||||||||||||| ||| || | ||| ||||| ||| ||||||||||| ||||| ||| |||||| |
|
|
| T |
14653295 |
aaattgaacaggatccttaaccctttttggatcagtaacaagcttgttaacagacactcgaatgtgtgagatcatcacttcttttatttttgagagacca |
14653196 |
T |
|
| Q |
559 |
ccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgtttactaacccagaattctccatatggactaatc |
658 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||| ||| | ||| || ||||||||| |||||||| |||||||||| || ||||| |
|
|
| T |
14653195 |
ttaggaacacgtcggaacaagttatacattctttccaaatcttcatatttagtaccacaaagcatgtttacaaacccagagttctccatattgattaatc |
14653096 |
T |
|
| Q |
659 |
taagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcatt |
758 |
Q |
| |
|
| |||||| |||| || |||||||||||||| | | || || |||| ||||||| ||| ||| ||| ||| | || |||||||| || || |||| |
|
|
| T |
14653095 |
tcagcatgggattttcaatcatctccttctcgatcgcattaataattttcttttcagtcttagggtccaagtaatga---actctatccgtttcctcatt |
14652999 |
T |
|
| Q |
759 |
caggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaa |
858 |
Q |
| |
|
||||| |||| | |||||||||||||||||||| ||| | |||| ||| ||||||| |||||||| ||| | |||| | ||| |||||| ||| |
|
|
| T |
14652998 |
caggcatctctcaactttcttgagataatccccacagtcaaaacacttaatatatttctgggattcagccttgtaagattcagctaaaacttgcagaaaa |
14652899 |
T |
|
| Q |
859 |
ggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagt |
958 |
Q |
| |
|
||| || ||||| ||||| |||||| ||||||||||||||||| ||||| || || | |||||||||||||| ||| |||| | ||||| | ||| | |
|
|
| T |
14652898 |
ggagtctcaaatacttgctcataaacagaaggacctaaatccatcagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgct |
14652799 |
T |
|
| Q |
959 |
ccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc |
1041 |
Q |
| |
|
|||| |||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14652798 |
ccttaaatacaaactccaaaagcgtattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc |
14652716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 565 - 1041
Target Start/End: Original strand, 14749875 - 14750348
Alignment:
| Q |
565 |
acacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgtttactaacccagaattctccatatggactaatctaagca |
664 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||| | ||| |||||| ||| || ||||||||||||||||||||||| || |||| ||||||||||| |
|
|
| T |
14749875 |
acacgatggaacaagttatacattctacccaaatcgttatatttatcaccacaaagcatgtttactaacccagaattctgcaattggattaatctaagca |
14749974 |
T |
|
| Q |
665 |
tgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtgtcgaagaagtggctcactctatcaattaccgcattcaggct |
764 |
Q |
| |
|
||||||| || || |||||||| | || | |||||||||||| || || | ||| || || || ||||||| |||||| || || ||||||| | |
|
|
| T |
14749975 |
tgtgattttcaatagtctccttc---agcatattagtaatcttctcttttgtcccagtatccaataaatggctcagtctatctgtttcctcattcagccg |
14750071 |
T |
|
| Q |
765 |
catctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattc |
864 |
Q |
| |
|
| | | | ||||||| |||||| || |||||| | | |||| |||||||| |||||||| | |||||||||| ||||| ||| | |||||| || |
|
|
| T |
14750072 |
ctttgcaactttcttgaaataatcaccgcaatcagaaaaatcaacaaatttctgggattcagccctatagaactcagctgaaacttgtaaaaaaggagtc |
14750171 |
T |
|
| Q |
865 |
acaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcctcagcatagtccttgc |
964 |
Q |
| |
|
||||||||| | |||||| | |||||||||||||||||||| || | || |||||||||| ||| |||||||| | ||||| |||||| |||||| |
|
|
| T |
14750172 |
tcaaattcttcctcataaacaaagggacctaaatccattagcatctttgatagatttctaatcggttctctattaacatcttccgcagcatgctccttga |
14750271 |
T |
|
| Q |
965 |
atactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc |
1041 |
Q |
| |
|
|||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
14750272 |
atacaaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattctctctccacaggttc |
14750348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 849 - 1041
Target Start/End: Complemental strand, 14627491 - 14627299
Alignment:
| Q |
849 |
ttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttctaatcagttttctattaaaaacttcc |
948 |
Q |
| |
|
|||||| |||||| || ||||| ||||| |||||| |||||||||||||| |||||||| || || | |||||||||||||| ||| |||| | ||||| |
|
|
| T |
14627491 |
ttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttcc |
14627392 |
T |
|
| Q |
949 |
tcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacaggttc |
1041 |
Q |
| |
|
| ||| || || |||| | |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14627391 |
ccggcacgctctttaaatacaaactccaaaagcgtattcgacaatcgattccttatctggtttgaataaataacattttctctccacaggttc |
14627299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 192 - 419
Target Start/End: Complemental strand, 14709423 - 14709196
Alignment:
| Q |
192 |
cttctcaaacacatctttttcctgcaaataacggaataaaaccataaccttgttaagagtaatctctacaacatcctcactaattccctttagaccattt |
291 |
Q |
| |
|
||||||||||| |||||||| ||||| || ||||||| | | ||||| | |||||||||||||| | |||| || |||| ||||||||| | ||| |
|
|
| T |
14709423 |
cttctcaaacatgtctttttcttgcaagtatcggaatagcgtcgtcaccttttcaagagtaatctctagatcatcttcgctaactccctttagttccttt |
14709324 |
T |
|
| Q |
292 |
tgaagcttatcgtctataaatagtgatatgtactctggagaacgaggattcaagttaatgaaaaattcaaatgaggaattcagatccttctggaacaact |
391 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||| ||| || ||||||||||||||||| || |||||||||| | | || |||||||| | |
|
|
| T |
14709323 |
ctaagcttatcgtctacaaatagtgaaatgtactctggagaacaagggtttaagttaatgaaaaattcgaacgaggaattcaaagcattttggaacaaat |
14709224 |
T |
|
| Q |
392 |
tgtcattactaaatgccaaatttataat |
419 |
Q |
| |
|
||| ||| |||||| |||| |||||||| |
|
|
| T |
14709223 |
tgttatttctaaattccaagtttataat |
14709196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 188 - 362
Target Start/End: Original strand, 14756732 - 14756906
Alignment:
| Q |
188 |
aatacttctcaaacacatctttttcctgcaaataacggaataaaaccataaccttgttaagagtaatctctacaacatcctcactaattccctttagacc |
287 |
Q |
| |
|
||||| ||||||||| |||||||| |||| || ||||||| ||| ||||| | |||||||||||||| | ||||||| |||| ||||||||| |
|
|
| T |
14756732 |
aatacatctcaaacatgtctttttcttgcaggtatcggaatagtctcatcaccttttcaagagtaatctctagatcatcctcgctaactccctttagtta |
14756831 |
T |
|
| Q |
288 |
attttgaagcttatcgtctataaatagtgatatgtactctggagaacgaggattcaagttaatgaaaaattcaaa |
362 |
Q |
| |
|
||| |||||||||||||| ||||||||| ||||||||||||| || ||| ||||||||||||||||||||||| |
|
|
| T |
14756832 |
ctttctaagcttatcgtctacaaatagtgaaatgtactctggagtacaagggttcaagttaatgaaaaattcaaa |
14756906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 220; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 49 - 923
Target Start/End: Original strand, 24394858 - 24395732
Alignment:
| Q |
49 |
ttcatgtcggtaaacatgccctctaattttgcagtaaattggtatccacattctgtcttcatcttagctatgagactcctctcggcatcatcagaaactg |
148 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| |||||||| || |||||||| ||||| | |||| | |||||||| || || |||||||||||||| | |
|
|
| T |
24394858 |
ttcatgtctgtaaacattccctctaattttgatgtaaattgatagccacattcagtcttgagcttaacaatgagacttctttcagcatcatcagaaaccg |
24394957 |
T |
|
| Q |
149 |
tttttccacacaaaagccgctttgcaaggtgctgtttgtaatacttctcaaacacatctttttcctgcaaataacggaataaaaccataaccttgttaag |
248 |
Q |
| |
|
|||||||| ||||||||| |||||| || |||||||| |||||||||||||| ||||||||||| ||||| || ||||| | | ||| ||||||| || |
|
|
| T |
24394958 |
tttttccagacaaaagcctctttgccagatgctgtttataatacttctcaaaaacatctttttcttgcaagtatcggaacagcatcatcaccttgtccag |
24395057 |
T |
|
| Q |
249 |
agtaatctctacaacatcctcactaattccctttagaccattttgaagcttatcgtctataaatagtgatatgtactctggagaacgaggattcaagtta |
348 |
Q |
| |
|
||||| |||||| | ||||| | | || || ||||| || |||| ||||| |||| ||||||||| ||| ||||||||||||| |||||||||||| |
|
|
| T |
24395058 |
agtaacttctacatcgtcctcgttgacccctttcagacccttacgaagtttatcatctacaaatagtgaaatgaactctggagaacggggattcaagtta |
24395157 |
T |
|
| Q |
349 |
atgaaaaattcaaatgaggaattcagatccttctggaacaacttgtcattactaaatgccaaatttataatcctgttgaatttatctttctcatctaaga |
448 |
Q |
| |
|
|||||| ||||||| |||||||||| | | |||||||| ||||||| || | |||||| ||||||||| ||| | |||| |||||||||||||||| |
|
|
| T |
24395158 |
atgaaatattcaaacgaggaattcaaagcattctggaaagacttgtcgttgttgaatgcctggtttataatcttgtcgtatttgtctttctcatctaaga |
24395257 |
T |
|
| Q |
449 |
gcttctgcacaaattcaaccggattcttcaacctttctggatcagtaacaagctgcttaccatagtctctaatgtatgaagtcatcacttctcgtatttg |
548 |
Q |
| |
|
|| |||||||||| || || |||| |||||| ||||| ||||| ||||||||||| |||||| | || || |||| | |||||||||| |||||||||| |
|
|
| T |
24395258 |
gcctctgcacaaactcgactggatccttcaatctttcaggatctgtaacaagctgtttaccagattcccttatgtgtaaagtcatcacctctcgtatttt |
24395357 |
T |
|
| Q |
549 |
tgatagaccaccgttgacacgacggaacaagttatacattctactcaaatcttcatacttatcatcaccaatcatgtttactaacccagaattctccata |
648 |
Q |
| |
|
| ||||| || ||||| ||||||||||||||||| |||| |||||||||||| |||||||||| || |||||| ||||| ||||||||||||||| |
|
|
| T |
24395358 |
caaaagaccgtcggctacacggcggaacaagttatacatcctacccaaatcttcatatttatcatcacaaagcatgttgactaaaccagaattctccata |
24395457 |
T |
|
| Q |
649 |
tggactaatctaagcatgtgattatcgatcatctccttctccaccacaatagtaatcttcttttgagtgctagtg-tcgaagaagtggctcactctatca |
747 |
Q |
| |
|
|||| ||| || ||||||||||| || ||||||| | |||||||||| || |||||||||||| ||| || | | || | | | |||| |||||||| |
|
|
| T |
24395458 |
tggattaacctgagcatgtgattttcaatcatctgcgtctccaccactttattaatcttcttttcagt-ctcgggatccatgtaatggccaactctatcc |
24395556 |
T |
|
| Q |
748 |
attaccgcattcaggctcatctcggccttcttgagataatccccacaatcacagcactcaatcaatttctgtgattcagcacggtagaactcagttgaaa |
847 |
Q |
| |
|
||| || ||||||| | | | || || ||||| |||||||| ||||||||||| |||||||| ||| | || ||||| | | || ||||||| ||||| |
|
|
| T |
24395557 |
atttcctcattcagacgcctttcagctttcttaagataatcaccacaatcacaacactcaatgaatctttgggattctacctgataaaactcagctgaaa |
24395656 |
T |
|
| Q |
848 |
gttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatatttct |
923 |
Q |
| |
|
||| || ||| || | |||| ||||| |||||| | |||||||||||||||||||| || ||||||||||| |
|
|
| T |
24395657 |
cttgaagaaaatgagcctcaaaatcttgaccataaacagctggacctaaatccattagcatttttgttatatttct |
24395732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1961 (Bit Score: 177; Significance: 7e-95; HSPs: 1)
Name: scaffold1961
Description:
Target: scaffold1961; HSP #1
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 817 - 1041
Target Start/End: Original strand, 1 - 225
Alignment:
| Q |
817 |
tgtgattcagcacggtagaactcagttgaaagttgcagcaaaggattcacaaattcttgcatataaacggaaggacctaaatccattagcatattcgtta |
916 |
Q |
| |
|
||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1 |
tgtgattcagcccggtagaactcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatattcgtta |
100 |
T |
|
| Q |
917 |
tatttctaatcagttttctattaaaaacttcctcagcatagtccttgcatactactcccaaaagcatattcgacaatcgagtccttatctggtttgaata |
1016 |
Q |
| |
|
| ||||||||||||||| |||||| ||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
101 |
tttttctaatcagttttttattaacgacttcctcagcatagtccttgcatattaatcccaaaagcatattcaaaaatcgagtccttatctggtttgaata |
200 |
T |
|
| Q |
1017 |
aataacattttctctccacaggttc |
1041 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
201 |
aataacattttctctccacaggttc |
225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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