View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12241_low_23 (Length: 262)

Name: NF12241_low_23
Description: NF12241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12241_low_23
NF12241_low_23
[»] chr2 (48 HSPs)
chr2 (1-62)||(28484532-28484593)
chr2 (1-64)||(17328263-17328327)
chr2 (5-64)||(39227965-39228024)
chr2 (1-51)||(9011812-9011862)
chr2 (1-51)||(23260375-23260425)
chr2 (1-51)||(29098074-29098124)
chr2 (7-64)||(37147723-37147780)
chr2 (3-64)||(38386100-38386160)
chr2 (1-64)||(29098187-29098251)
chr2 (1-64)||(3364499-3364562)
chr2 (1-64)||(28149490-28149553)
chr2 (1-51)||(1498942-1498992)
chr2 (1-51)||(30371441-30371491)
chr2 (1-50)||(1499065-1499114)
chr2 (7-64)||(28484421-28484478)
chr2 (1-49)||(38210920-38210968)
chr2 (8-51)||(16577178-16577221)
chr2 (1-64)||(17328148-17328211)
chr2 (5-48)||(28110313-28110355)
chr2 (5-50)||(37243480-37243525)
chr2 (1-64)||(22535621-22535685)
chr2 (202-234)||(33641133-33641165)
chr2 (1-64)||(37147606-37147670)
chr2 (5-51)||(85499-85546)
chr2 (5-64)||(3364387-3364445)
chr2 (5-44)||(9011942-9011981)
chr2 (202-237)||(25926886-25926921)
chr2 (1-51)||(28149617-28149668)
chr2 (202-241)||(38385929-38385968)
chr2 (1-64)||(38385989-38386051)
chr2 (1-44)||(38625095-38625137)
chr2 (202-245)||(41089145-41089188)
chr2 (205-242)||(2809615-2809652)
chr2 (203-236)||(16670498-16670531)
chr2 (201-234)||(38210865-38210898)
chr2 (8-51)||(85622-85666)
chr2 (202-234)||(16577371-16577403)
chr2 (202-234)||(17328093-17328125)
chr2 (202-234)||(19493472-19493504)
chr2 (202-234)||(19641447-19641479)
chr2 (202-234)||(19840040-19840072)
chr2 (202-234)||(22116156-22116188)
chr2 (202-234)||(29835103-29835135)
chr2 (206-234)||(29835324-29835352)
chr2 (205-237)||(34428635-34428667)
chr2 (202-234)||(34635707-34635739)
chr2 (202-234)||(37147552-37147584)
chr2 (203-239)||(38937533-38937569)
[»] chr4 (48 HSPs)
chr4 (1-64)||(17289914-17289977)
chr4 (1-51)||(9001500-9001550)
chr4 (1-51)||(16493672-16493722)
chr4 (1-51)||(17289799-17289849)
chr4 (1-51)||(39868524-39868574)
chr4 (1-51)||(44561507-44561557)
chr4 (1-64)||(45900723-45900786)
chr4 (1-51)||(21780306-21780356)
chr4 (5-51)||(22272990-22273036)
chr4 (1-51)||(47321042-47321091)
chr4 (7-51)||(17313011-17313055)
chr4 (3-51)||(21798391-21798439)
chr4 (1-49)||(39868650-39868698)
chr4 (5-49)||(40696161-40696205)
chr4 (7-51)||(56467598-56467642)
chr4 (1-64)||(1386176-1386239)
chr4 (1-51)||(9791595-9791646)
chr4 (1-51)||(16482110-16482161)
chr4 (1-51)||(51396214-51396265)
chr4 (1-51)||(21780177-21780227)
chr4 (1-51)||(56216895-56216945)
chr4 (7-44)||(21798524-21798561)
chr4 (7-51)||(16493580-16493624)
chr4 (1-64)||(18454249-18454313)
chr4 (1-44)||(18454386-18454430)
chr4 (202-234)||(46094264-46094296)
chr4 (1-64)||(55363860-55363923)
chr4 (7-51)||(56467477-56467520)
chr4 (4-51)||(6439370-6439417)
chr4 (4-51)||(10718095-10718142)
chr4 (4-51)||(10931864-10931911)
chr4 (1-64)||(11563349-11563411)
chr4 (4-51)||(45900610-45900657)
chr4 (1-51)||(43751230-43751280)
chr4 (201-234)||(6595267-6595300)
chr4 (2-51)||(18437172-18437220)
chr4 (202-234)||(550674-550706)
chr4 (202-234)||(3525892-3525924)
chr4 (11-51)||(10682748-10682788)
chr4 (11-51)||(10896388-10896428)
chr4 (202-234)||(11563541-11563573)
chr4 (202-234)||(20125442-20125474)
chr4 (202-234)||(21780123-21780155)
chr4 (202-234)||(24215765-24215797)
chr4 (202-234)||(27579768-27579800)
chr4 (202-234)||(37273419-37273451)
chr4 (202-234)||(50138489-50138521)
chr4 (1-64)||(53231829-53231893)
[»] chr1 (41 HSPs)
chr1 (1-64)||(31532428-31532491)
chr1 (1-51)||(9043625-9043675)
chr1 (1-50)||(5330476-5330525)
chr1 (1-64)||(28411085-28411149)
chr1 (1-64)||(5330592-5330655)
chr1 (1-64)||(51904035-51904098)
chr1 (1-51)||(6540869-6540919)
chr1 (2-51)||(13154636-13154686)
chr1 (1-51)||(46561441-46561491)
chr1 (1-64)||(16698925-16698990)
chr1 (1-64)||(4646813-4646877)
chr1 (5-64)||(5348307-5348366)
chr1 (1-51)||(7112673-7112724)
chr1 (1-51)||(16699055-16699106)
chr1 (1-51)||(21853950-21854000)
chr1 (5-50)||(46136146-46136191)
chr1 (202-242)||(4647897-4647937)
chr1 (202-234)||(5348164-5348196)
chr1 (202-242)||(24987601-24987641)
chr1 (1-64)||(27794413-27794477)
chr1 (1-44)||(27794551-27794595)
chr1 (1-64)||(28724467-28724531)
chr1 (4-51)||(21853476-21853523)
chr1 (202-241)||(32131927-32131966)
chr1 (204-234)||(16698870-16698900)
chr1 (1-62)||(29018536-29018598)
chr1 (5-51)||(47021897-47021943)
chr1 (6-51)||(47022019-47022065)
chr1 (1-50)||(7112550-7112599)
chr1 (202-234)||(2472608-2472640)
chr1 (3-51)||(4646944-4646992)
chr1 (205-237)||(7112748-7112780)
chr1 (202-234)||(9439426-9439458)
chr1 (202-234)||(10028001-10028033)
chr1 (1-36)||(15790438-15790474)
chr1 (202-234)||(18458826-18458858)
chr1 (202-234)||(25235775-25235807)
chr1 (202-234)||(26095815-26095847)
chr1 (202-234)||(26097051-26097083)
chr1 (202-234)||(47022093-47022125)
chr1 (1-49)||(50596114-50596162)
[»] chr6 (27 HSPs)
chr6 (1-63)||(3593396-3593458)
chr6 (1-50)||(9286258-9286307)
chr6 (1-64)||(24062334-24062397)
chr6 (1-51)||(3593524-3593574)
chr6 (1-51)||(4840741-4840790)
chr6 (1-51)||(30245891-30245941)
chr6 (1-51)||(30246015-30246065)
chr6 (2-51)||(7576133-7576182)
chr6 (1-49)||(31885984-31886031)
chr6 (1-51)||(5334699-5334749)
chr6 (1-50)||(7054135-7054185)
chr6 (1-64)||(13357525-13357589)
chr6 (1-44)||(9286390-9286433)
chr6 (4-61)||(12321007-12321065)
chr6 (1-51)||(12321132-12321182)
chr6 (5-51)||(29964603-29964648)
chr6 (205-234)||(3593599-3593628)
chr6 (203-243)||(56137-56177)
chr6 (7-51)||(1319178-1319221)
chr6 (202-234)||(3063507-3063539)
chr6 (202-234)||(10344051-10344083)
chr6 (202-234)||(13114399-13114431)
chr6 (202-234)||(14328670-14328702)
chr6 (202-234)||(14421680-14421712)
chr6 (206-234)||(18246148-18246176)
chr6 (202-234)||(24387785-24387817)
chr6 (202-234)||(29942467-29942499)
[»] chr3 (40 HSPs)
chr3 (1-51)||(19623961-19624011)
chr3 (1-51)||(5417218-5417268)
chr3 (1-51)||(12767118-12767168)
chr3 (1-51)||(22949433-22949483)
chr3 (1-64)||(30271600-30271663)
chr3 (2-51)||(25109887-25109937)
chr3 (1-51)||(30271729-30271778)
chr3 (1-64)||(27432757-27432821)
chr3 (7-51)||(36867698-36867742)
chr3 (5-51)||(5416120-5416167)
chr3 (1-51)||(7584305-7584353)
chr3 (1-51)||(22949302-22949353)
chr3 (1-51)||(27760344-27760395)
chr3 (1-63)||(29313953-29314016)
chr3 (1-51)||(30586219-30586270)
chr3 (1-51)||(30586348-30586399)
chr3 (1-51)||(10979903-10979952)
chr3 (1-51)||(46902054-46902104)
chr3 (5-50)||(43767720-43767765)
chr3 (1-64)||(3548293-3548357)
chr3 (5-64)||(49872887-49872947)
chr3 (1-43)||(36867815-36867858)
chr3 (1-51)||(49872771-49872822)
chr3 (1-64)||(53806735-53806798)
chr3 (1-51)||(25110013-25110062)
chr3 (1-51)||(27760472-27760522)
chr3 (1-63)||(43767831-43767893)
chr3 (1-51)||(46901928-46901978)
chr3 (1-38)||(12766994-12767030)
chr3 (1-64)||(3548177-3548241)
chr3 (202-234)||(6510216-6510248)
chr3 (202-234)||(19624034-19624066)
chr3 (202-248)||(22949231-22949279)
chr3 (202-234)||(30271545-30271577)
chr3 (202-234)||(47115586-47115618)
chr3 (202-234)||(49872973-49873005)
chr3 (202-234)||(49880761-49880793)
chr3 (1-64)||(51252221-51252285)
chr3 (202-234)||(51460787-51460819)
chr3 (202-234)||(54567767-54567799)
[»] chr5 (41 HSPs)
chr5 (1-64)||(31861547-31861610)
chr5 (1-64)||(31861664-31861727)
chr5 (1-64)||(20688851-20688914)
chr5 (2-64)||(36354722-36354783)
chr5 (1-51)||(42119240-42119289)
chr5 (1-50)||(24098489-24098538)
chr5 (1-51)||(26592378-26592429)
chr5 (1-51)||(20688981-20689030)
chr5 (1-50)||(21148853-21148903)
chr5 (2-63)||(33483064-33483126)
chr5 (1-51)||(35798634-35798684)
chr5 (6-64)||(39153562-39153620)
chr5 (1-64)||(12382881-12382945)
chr5 (1-64)||(21149038-21149102)
chr5 (202-234)||(36993007-36993039)
chr5 (7-51)||(37204931-37204975)
chr5 (202-233)||(16305133-16305164)
chr5 (1-44)||(24098622-24098664)
chr5 (1-51)||(33052872-33052923)
chr5 (1-44)||(35798515-35798558)
chr5 (1-51)||(40339386-40339437)
chr5 (1-39)||(40339500-40339539)
chr5 (1-51)||(9227035-9227085)
chr5 (1-51)||(11664129-11664178)
chr5 (203-241)||(15061848-15061886)
chr5 (1-51)||(22551699-22551748)
chr5 (5-51)||(24329467-24329513)
chr5 (202-248)||(26034832-26034878)
chr5 (1-46)||(35030873-35030919)
chr5 (1-51)||(39418902-39418952)
chr5 (20-64)||(9226925-9226969)
chr5 (202-234)||(10976771-10976803)
chr5 (1-64)||(12330909-12330973)
chr5 (1-41)||(12383005-12383045)
chr5 (202-234)||(12399610-12399642)
chr5 (3-50)||(20698472-20698520)
chr5 (202-234)||(22551523-22551555)
chr5 (202-234)||(29104445-29104477)
chr5 (202-234)||(37205004-37205036)
chr5 (202-234)||(38482319-38482351)
chr5 (1-49)||(38482374-38482422)
[»] scaffold0113 (2 HSPs)
scaffold0113 (1-51)||(28834-28884)
scaffold0113 (1-51)||(28127-28177)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-51)||(91232-91282)
scaffold0032 (202-234)||(91051-91083)
[»] scaffold0809 (2 HSPs)
scaffold0809 (1-64)||(3823-3885)
scaffold0809 (1-51)||(3949-3998)
[»] scaffold0740 (1 HSPs)
scaffold0740 (1-64)||(3702-3765)
[»] chr8 (29 HSPs)
chr8 (1-64)||(4105219-4105281)
chr8 (1-64)||(7988961-7989024)
chr8 (1-64)||(8315923-8315984)
chr8 (1-43)||(34985176-34985218)
chr8 (2-51)||(27198326-27198375)
chr8 (1-64)||(25601769-25601833)
chr8 (1-64)||(27198200-27198264)
chr8 (1-51)||(960326-960377)
chr8 (1-44)||(7988848-7988891)
chr8 (1-64)||(29726160-29726223)
chr8 (1-64)||(43121136-43121198)
chr8 (1-51)||(4105105-4105154)
chr8 (1-51)||(25601899-25601949)
chr8 (5-51)||(26447534-26447580)
chr8 (1-51)||(34019075-34019125)
chr8 (5-64)||(8388175-8388236)
chr8 (1-51)||(12330389-12330439)
chr8 (5-51)||(27987480-27987525)
chr8 (5-51)||(28044782-28044827)
chr8 (203-236)||(27164683-27164716)
chr8 (202-235)||(43400925-43400958)
chr8 (202-234)||(960521-960553)
chr8 (8-51)||(2696666-2696707)
chr8 (202-234)||(12330334-12330366)
chr8 (202-234)||(14329624-14329656)
chr8 (202-234)||(25277730-25277762)
chr8 (202-234)||(27543649-27543681)
chr8 (202-234)||(29309566-29309598)
chr8 (202-234)||(34985346-34985378)
[»] chr7 (56 HSPs)
chr7 (1-64)||(13279355-13279418)
chr7 (1-51)||(23314779-23314830)
chr7 (1-51)||(24204869-24204920)
chr7 (1-51)||(1693403-1693453)
chr7 (1-51)||(16902160-16902210)
chr7 (1-51)||(19979707-19979756)
chr7 (6-64)||(38193022-38193080)
chr7 (1-51)||(38193145-38193195)
chr7 (1-64)||(19410566-19410630)
chr7 (1-64)||(31186724-31186788)
chr7 (1-51)||(13279240-13279291)
chr7 (1-64)||(19272274-19272337)
chr7 (1-51)||(5021731-5021781)
chr7 (1-51)||(19410703-19410753)
chr7 (1-51)||(23371631-23371681)
chr7 (1-51)||(26930690-26930740)
chr7 (5-51)||(39580119-39580164)
chr7 (1-51)||(43251567-43251616)
chr7 (5-51)||(43251695-43251741)
chr7 (1-51)||(44414031-44414080)
chr7 (2-51)||(23784764-23784812)
chr7 (4-64)||(24205289-24205350)
chr7 (4-64)||(24206807-24206868)
chr7 (1-50)||(39118933-39118982)
chr7 (5-64)||(1693277-1693337)
chr7 (202-234)||(10688459-10688491)
chr7 (202-234)||(10980620-10980652)
chr7 (202-234)||(13882604-13882636)
chr7 (202-234)||(31186669-31186701)
chr7 (1-44)||(35913105-35913149)
chr7 (1-64)||(45163968-45164032)
chr7 (1-51)||(16902288-16902339)
chr7 (1-64)||(19272388-19272450)
chr7 (1-51)||(21298069-21298120)
chr7 (1-51)||(31186855-31186906)
chr7 (1-51)||(39119061-39119112)
chr7 (203-234)||(48168851-48168882)
chr7 (1-51)||(23784639-23784688)
chr7 (202-234)||(1594148-1594180)
chr7 (1-44)||(3624142-3624186)
chr7 (202-234)||(6269529-6269561)
chr7 (202-234)||(9915652-9915684)
chr7 (202-234)||(9923564-9923596)
chr7 (202-234)||(13279441-13279473)
chr7 (1-64)||(13286802-13286866)
chr7 (202-234)||(13797635-13797667)
chr7 (202-234)||(19272473-19272505)
chr7 (202-234)||(23371450-23371482)
chr7 (202-234)||(23784585-23784617)
chr7 (202-242)||(24555925-24555965)
chr7 (1-44)||(26050363-26050407)
chr7 (1-44)||(26059722-26059766)
chr7 (1-44)||(26930823-26930867)
chr7 (202-234)||(38193218-38193250)
chr7 (202-234)||(39580190-39580222)
chr7 (202-234)||(48945185-48945217)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-51)||(38105-38155)
[»] scaffold0031 (3 HSPs)
scaffold0031 (1-64)||(1996-2060)
scaffold0031 (5-51)||(1887-1934)
scaffold0031 (202-234)||(1828-1860)
[»] scaffold0450 (3 HSPs)
scaffold0450 (1-64)||(8033-8097)
scaffold0450 (1-51)||(7914-7967)
scaffold0450 (202-234)||(8119-8151)
[»] scaffold0136 (1 HSPs)
scaffold0136 (202-234)||(660-692)
[»] scaffold0727 (1 HSPs)
scaffold0727 (202-237)||(834-869)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-51)||(4613-4664)
[»] scaffold0769 (1 HSPs)
scaffold0769 (202-234)||(4175-4207)
[»] scaffold0384 (1 HSPs)
scaffold0384 (202-234)||(4451-4483)
[»] scaffold0142 (1 HSPs)
scaffold0142 (202-234)||(34850-34882)
[»] scaffold0010 (1 HSPs)
scaffold0010 (202-234)||(26309-26341)


Alignment Details
Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28484593 - 28484532
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaatag 62  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  28484593 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttacatctctaatag 28484532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17328327 - 17328263
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||||||    
T  17328327 aaaatttttattttgattcaaccccctgtaaaatatttttgttttgatttacctctctaataggc 17328263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 39228024 - 39227965
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||  |||||||||||    
T  39228024 tttttattatgattcaccctctgtaaaatatttttgttttgatttactcctctaataggc 39227965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9011812 - 9011862
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  9011812 aaaatttttattttgattcaccctccgtaaaatatttttgttttgatttac 9011862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23260375 - 23260425
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  23260375 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 23260425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29098074 - 29098124
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  29098074 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 29098124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 37147780 - 37147723
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| || |||||||||    
T  37147780 tttattttgattcaccttctgtaaaatatttttgttttgatttacctccctaataggc 37147723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 38386160 - 38386100
Alignment:
Q  3 aatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||    
T  38386160 aatttttattttgattcaccc-ctgtaaaatatttttgttttgatttacctccctaataggc 38386100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29098251 - 29098187
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| |||||| || |||||||||    
T  29098251 aaaatttttattttgattcacccccctgtaaaatatttttgttttcatttacctccctaataggc 29098187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3364562 - 3364499
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| |  |||||||||||||||||||| |||||| || |||||||||    
T  3364562 aaaatttttattttgattcatctcctgtaaaatatttttgttttgatttacctccctaataggc 3364499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28149490 - 28149553
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||||  | |||||||||    
T  28149490 aaaaattttattttgattcaccccctgtaaaatatttttgttttgatttacccccctaataggc 28149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1498942 - 1498992
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  1498942 aaaatttttattttgattcaccccatgtaaaatatttttgttttgatttac 1498992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30371441 - 30371491
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  30371441 aaaatttttatttttattcaccccctgtaaaatatttttgttttgatttac 30371491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1499114 - 1499065
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  1499114 aaaatttttattttgattcaccccctttaaaatatttttgttttgattta 1499065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 28484421 - 28484478
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||  | |||||||||    
T  28484421 tttattttgattcaccccctgtaaaatatttttgttttgatttacccccctaataggc 28484478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38210920 - 38210968
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattt 49  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  38210920 aaaatttttattttgattcacctcctgtaaaatatttttgttttgattt 38210968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 16577178 - 16577221
Alignment:
Q  8 ttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||    
T  16577178 ttattttgattcatcctctgtaaaatatttttgttttgatttac 16577221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17328148 - 17328211
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||| || | ||||||||| |||||||||| |||||| ||| ||||||||    
T  17328148 aaaatttttattttgatttacaccctgtaaaatgtttttgttttgatttacctctttaataggc 17328211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 28110313 - 28110355
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatt 48  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  28110313 tttttattttgattcaccc-ctgtaaaatatttttgtttttatt 28110355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 37243480 - 37243525
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    |||||||||||||||| || |||||||||||||||||||| |||||    
T  37243480 tttttattttgattcatccactgtaaaatatttttgttttgattta 37243525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22535685 - 22535621
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||| ||||||  | |||||||||    
T  22535685 aaaatttttattttgattcaaccctttgtaaaacatttttgttttgatttacccccctaataggc 22535621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 33641165 - 33641133
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  33641165 acctatattacagagggtaaagacctattaacc 33641133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37147606 - 37147670
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| | | ||||||||||||||||| ||||||  | |||||||||    
T  37147606 aaaatttttattttgattcacccccttataaaatatttttgttttgatttacccccctaataggc 37147670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 85499 - 85546
Alignment:
Q  5 tttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  85499 tttttattttgattcatccccctgtaaaatatttttgttttgatttac 85546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 3364387 - 3364445
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||  | |||||||||    
T  3364387 tttttattttgattcaccc-ctgtaaagtatttttgttttgatttaccaccctaataggc 3364445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 9011981 - 9011942
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  9011981 tttttattttgattcaccccttgtaaaatatttttgtttt 9011942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 25926921 - 25926886
Alignment:
Q  202 acctatattacagagggtaaagacctattaacctta 237  Q
    |||||||||||||||| |||||||||||||||||||    
T  25926921 acctatattacagaggataaagacctattaacctta 25926886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28149668 - 28149617
Alignment:
Q  1 aaaatttttattttgattcaccctct-gtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||  || |||||||||||||||||| ||||||    
T  28149668 aaaatttttattttgattcaccgccttgtaaaatatttttgttttgatttac 28149617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 38385968 - 38385929
Alignment:
Q  202 acctatattacagagggtaaagacctattaaccttatttt 241  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  38385968 acctatattacagggggtaaagacctattaaccttttttt 38385929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38385989 - 38386051
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||  ||||| ||| |||||||||| |||||| || |||||||||    
T  38385989 aaaatttttattttgattcacctcctgtagaatgtttttgttttgatttacctc-ctaataggc 38386051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38625137 - 38625095
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  38625137 aaaatttttattttgattcatc-tctgtaaaatatttttgtttt 38625095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 41089188 - 41089145
Alignment:
Q  202 acctatattacagagggtaaagacctattaaccttattttatat 245  Q
    |||||||||||||||| |||||||||||||||||  ||||||||    
T  41089188 acctatattacagaggttaaagacctattaacctatttttatat 41089145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 2809652 - 2809615
Alignment:
Q  205 tatattacagagggtaaagacctattaaccttatttta 242  Q
    ||||||||||||||||||||||||||||| || |||||    
T  2809652 tatattacagagggtaaagacctattaactttttttta 2809615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 16670531 - 16670498
Alignment:
Q  203 cctatattacagagggtaaagacctattaacctt 236  Q
    |||||||||||| |||||||||||||||||||||    
T  16670531 cctatattacagggggtaaagacctattaacctt 16670498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 38210898 - 38210865
Alignment:
Q  201 tacctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||| |||||||||||||||||||    
T  38210898 tacctatattacagggggtaaagacctattaacc 38210865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 85666 - 85622
Alignment:
Q  8 ttattttgattcaccctc-tgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||    
T  85666 ttattttgattcaccctcctgtaaaatatttttgatttgatttac 85622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 16577371 - 16577403
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  16577371 acctatattacagggggtaaagacctattaacc 16577403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 17328125 - 17328093
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  17328125 acctatattacagggggtaaagacctattaacc 17328093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 19493472 - 19493504
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  19493472 acctatattacagggggtaaagacctattaacc 19493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 19641479 - 19641447
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  19641479 acctatattacagggggtaaagacctattaacc 19641447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 19840072 - 19840040
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  19840072 acctatattacagggggtaaagacctattaacc 19840040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 22116188 - 22116156
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  22116188 acctatattacagggggtaaagacctattaacc 22116156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 29835135 - 29835103
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  29835135 acctatattacagggggtaaagacctattaacc 29835103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 234
Target Start/End: Original strand, 29835324 - 29835352
Alignment:
Q  206 atattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||    
T  29835324 atattacagagggtaaagacctattaacc 29835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 34428667 - 34428635
Alignment:
Q  205 tatattacagagggtaaagacctattaacctta 237  Q
    |||||||||| ||||||||||||||||||||||    
T  34428667 tatattacagggggtaaagacctattaacctta 34428635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 34635739 - 34635707
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  34635739 acctatattacagggggtaaagacctattaacc 34635707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 37147584 - 37147552
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  37147584 acctatattacagggggtaaagacctattaacc 37147552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 38937533 - 38937569
Alignment:
Q  203 cctatattacagagggtaaagacctattaaccttatt 239  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  38937533 cctatattacagggggtaaagacctattaaccctatt 38937569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17289977 - 17289914
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||| | |||||||||    
T  17289977 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttacgcccctaataggc 17289914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9001500 - 9001550
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  9001500 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 9001550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16493722 - 16493672
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  16493722 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 16493672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17289799 - 17289849
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  17289799 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 17289849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39868524 - 39868574
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  39868524 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 39868574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44561507 - 44561557
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44561507 aaaatttttattttgattcaccccctgtaaaatatttttgttttaatttac 44561557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45900786 - 45900723
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| ||||||  | |||||||||    
T  45900786 aaaaattttattttgattcaccctttgtaaaatatttttgttttgatttacccccctaataggc 45900723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21780356 - 21780306
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  21780356 aaaatttttattttgattcaccccctgtaaaatattttggttttgatttac 21780306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 22272990 - 22273036
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  22272990 tttttattttgattcaccccctgtaaaatatttttgttttgatttac 22273036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47321042 - 47321091
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  47321042 aaaatttttattttgattcaccc-ctgtaaaatatttttgttttgatttac 47321091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 17313055 - 17313011
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  17313055 tttattttgattcaccccctgtaaaatatttttgttttgatttac 17313011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 21798391 - 21798439
Alignment:
Q  3 aatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||    
T  21798391 aatttttattttgattcatcccctgtaaaatatttttgttttgatttac 21798439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39868698 - 39868650
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattt 49  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  39868698 aaaaattttattttgattcaccccctgtaaaatatttttgttttgattt 39868650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 40696205 - 40696161
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttattt 49  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  40696205 tttttattttgattcaccccctgtaaaatatttttgttttgattt 40696161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 56467642 - 56467598
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  56467642 tttattttgattcaccccctgtaaaatatttttgttttgatttac 56467598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1386239 - 1386176
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||| | || |||||||||||||||||||| ||||||  | |||||||||    
T  1386239 aaaatttttattttgatttatcccctgtaaaatatttttgttttaatttacccccctaataggc 1386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9791646 - 9791595
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  9791646 aaaatttttattttgattcaaccccctgtaaaatatttttgttttgatttac 9791595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16482110 - 16482161
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  16482110 aaaatttttattttgattcatccctctgtaagatatttttgttttgatttac 16482161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51396214 - 51396265
Alignment:
Q  1 aaaatttttattttgattcaccct-ctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  51396214 aaaatttttattttgattcgccctactgtaaaatatttttgttttgatttac 51396265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21780177 - 21780227
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||||  ||||||||||||| ||||| ||||||    
T  21780177 aaaatttttattttgattcaccccatgtaaaatattttggttttaatttac 21780227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 56216945 - 56216895
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||| |  |||||||||||||||||| ||||||    
T  56216945 aaaatttttattttgattcacctttcgtaaaatatttttgttttgatttac 56216895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 21798561 - 21798524
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttt 44  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  21798561 tttattttgattcaccccctgtaaaatatttttgtttt 21798524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 16493580 - 16493624
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||    
T  16493580 tttattttgattcactccctgtaaaatatttttgttttgatttac 16493624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18454249 - 18454313
Alignment:
Q  1 aaaatttttattttgattcaccctct-gtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||| ||||| || |||||||||||||||||| ||||||  | |||||||||    
T  18454249 aaaatttttattttgatacacccccttgtaaaatatttttgttttgatttacccccctaataggc 18454313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18454430 - 18454386
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  18454430 aaaatttttattttgattcacccccctgtaaaatatttttgtttt 18454386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 46094264 - 46094296
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  46094264 acctatattacagagggtaaagacctattaacc 46094296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 55363923 - 55363860
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaata-tttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| || ||||||| |||||||||| ||||||  |||||||||||    
T  55363923 aaaatttttattttgattcaccc-ctataaaatattttttgttttgatttacacctctaataggc 55363860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 56467477 - 56467520
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  56467477 tttattttgattcaccc-ctgtaaaatatttttgttttgatttac 56467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 6439417 - 6439370
Alignment:
Q  4 atttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||| |||| ||| |||| |||||||||||||||||||||||||||    
T  6439417 atttttttttttatttaccccctgtaaaatatttttgtttttatttac 6439370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 10718142 - 10718095
Alignment:
Q  4 atttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||| ||| |||| |||| |||||||||||||||||||||||||||    
T  10718142 atttttttttggatttacccgctgtaaaatatttttgtttttatttac 10718095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 10931911 - 10931864
Alignment:
Q  4 atttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||| ||| |||| |||| |||||||||||||||||||||||||||    
T  10931911 atttttttttggatttacccgctgtaaaatatttttgtttttatttac 10931864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11563349 - 11563411
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| | || ||||||||||||||| ||||||  | |||||||||    
T  11563349 aaaatttttattttgattcaccc-ccgtgaaatatttttgttttgatttacccccctaataggc 11563411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 45900610 - 45900657
Alignment:
Q  4 atttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||| |||||||| |||| |||||||||||||||||||| ||||||    
T  45900610 atttttgttttgatttaccccctgtaaaatatttttgttttgatttac 45900657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43751280 - 43751230
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||| ||||| |  |||||||||||||||||||| ||||||    
T  43751280 aaaatttttattttaattcatctcctgtaaaatatttttgttttgatttac 43751230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 6595267 - 6595300
Alignment:
Q  201 tacctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||| |||||||||||    
T  6595267 tacctatattacagagggtaaaaacctattaacc 6595300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 18437172 - 18437220
Alignment:
Q  2 aaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| ||  ||||||||||||||||||| ||||||    
T  18437172 aaatttttattttgattcatcca-tgtaaaatatttttgttttgatttac 18437220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 550706 - 550674
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  550706 acctatattacagggggtaaagacctattaacc 550674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 3525892 - 3525924
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||| ||||||||    
T  3525892 acctatattacagagggtaaagacttattaacc 3525924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 10682748 - 10682788
Alignment:
Q  11 ttttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||| |||| |||||||||||||||||||| ||||||    
T  10682748 ttttgatttaccccctgtaaaatatttttgttttgatttac 10682788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 10896388 - 10896428
Alignment:
Q  11 ttttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||| |||| |||||||||||||||||||| ||||||    
T  10896388 ttttgatttaccccctgtaaaatatttttgttttgatttac 10896428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 11563541 - 11563573
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  11563541 acctatattacagggggtaaagacctattaacc 11563573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 20125442 - 20125474
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  20125442 acctatattacagggggtaaagacctattaacc 20125474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 21780155 - 21780123
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  21780155 acctatattacagggggtaaagacctattaacc 21780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 24215765 - 24215797
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  24215765 acctatattacagggggtaaagacctattaacc 24215797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 27579768 - 27579800
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||| ||||||||    
T  27579768 acctatattacagagggtaaagacatattaacc 27579800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 37273419 - 37273451
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  37273419 acctatattacagggggtaaagacctattaacc 37273451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 50138521 - 50138489
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  50138521 acctatattacagggggtaaagacctattaacc 50138489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53231829 - 53231893
Alignment:
Q  1 aaaatttttattttgattcaccctct-gtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||| | || || |||||||||||||||||| ||||||  | |||||||||    
T  53231829 aaaatttttattttgatttatccccttgtaaaatatttttgttttcatttacccccctaataggc 53231893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31532491 - 31532428
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||    
T  31532491 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttacctccctaataggc 31532428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9043675 - 9043625
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  9043675 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 9043625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5330476 - 5330525
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  5330476 aaaatttttattttgattcaccccctgtaaaatatttttgttttgattta 5330525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28411149 - 28411085
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||  |||||||||||    
T  28411149 aaaatttttattttgattcaaccccctgtaaaatatttttgttttgatttacccctctaataggc 28411085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5330655 - 5330592
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||||  | |||||||||    
T  5330655 aaaatttttattttgattcaccacctgtaaaatatttttgttttgatttacccccctaataggc 5330592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 51904035 - 51904098
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||||||  ||||| ||||||||||||| |||||| || |||||||||    
T  51904035 aaaatttttattttgattcaccccgtgtaatatatttttgttttgatttacctccctaataggc 51904098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6540919 - 6540869
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  6540919 aaaatttttattttgattcaccccctataaaatatttttgttttgatttac 6540869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 13154636 - 13154686
Alignment:
Q  2 aaatttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  13154636 aaatttttattttgattcacccctctgtaaaatatttttgttttgatttac 13154686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46561441 - 46561491
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  46561441 aaaatttttattttgattcacaccctgtaaaatatttttgttttgatttac 46561491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16698925 - 16698990
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgttttt-atttacgtctctaataggc 64  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||  |||||||||||    
T  16698925 aaaatttttattttgattcacccccctgtaaaatatttttgtttttgatttaccactctaataggc 16698990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4646813 - 4646877
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||  | |||||||||    
T  4646813 aaaatttttattttgattcaaccccctgtaaaatatttttgttttgatttacccccctaataggc 4646877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 5348366 - 5348307
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||  | |||||||||    
T  5348366 tttttattttgattcaccacctgtaaaatatttttgttttgatttacccccctaataggc 5348307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7112724 - 7112673
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  7112724 aaaatttttattttgattcaaccccctgtaaaatatttttgttttgatttac 7112673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16699106 - 16699055
Alignment:
Q  1 aaaatttttattttgattcaccct-ctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  16699106 aaaatttttattttgattcaccccactgtaaaatatttttgttttgatttac 16699055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21854000 - 21853950
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||  | ||||||||||||||||||| ||||||    
T  21854000 aaaatttttattttgattcactatttgtaaaatatttttgttttgatttac 21853950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 46136146 - 46136191
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||    
T  46136146 tttttattttgattcacctcctgtaaaatatttttgttttgattta 46136191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 4647897 - 4647937
Alignment:
Q  202 acctatattacagagggtaaagacctattaaccttatttta 242  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  4647897 acctatattacagagggtaaagatctattaaccttttttta 4647937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 5348196 - 5348164
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  5348196 acctatattacagagggtaaagacctattaacc 5348164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 24987641 - 24987601
Alignment:
Q  202 acctatattacagagggtaaagacctattaaccttatttta 242  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  24987641 acctatattacagggggtaaagacctattaaccctatttta 24987601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27794413 - 27794477
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| |||||||||||||||||| | ||||||||||||||||||| ||||||  | |||||||||    
T  27794413 aaaaattttattttgattcacccccctgtaaaatatttttgttttgatttacccccctaataggc 27794477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27794595 - 27794551
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  27794595 aaaatttttattttgattcacccccctgtaaaatatttttgtttt 27794551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28724531 - 28724467
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||| | ||| |||||||||||||||||||| ||||||  | |||||||||    
T  28724531 aaaatttttattttgatttatccccctgtaaaatatttttgttttgatttacccccctaataggc 28724467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 21853476 - 21853523
Alignment:
Q  4 atttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||| |||||||| |||| |||||||||||||||||||| ||||||    
T  21853476 atttttgttttgatttaccccctgtaaaatatttttgttttaatttac 21853523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 32131927 - 32131966
Alignment:
Q  202 acctatattacagagggtaaagacctattaaccttatttt 241  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  32131927 acctatattacagggggtaaagacctattaaccctatttt 32131966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 16698900 - 16698870
Alignment:
Q  204 ctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||    
T  16698900 ctatattacagagggtaaagacctattaacc 16698870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29018598 - 29018536
Alignment:
Q  1 aaaatttttattttgattcacc-ctctgtaaaatatttttgtttttatttacgtctctaatag 62  Q
    |||||||||||||| ||| ||| | |||||||||||||||||||| ||||||  |||||||||    
T  29018598 aaaatttttattttaatttacctccctgtaaaatatttttgttttgatttacccctctaatag 29018536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 47021897 - 47021943
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  47021897 tttttattttgattcaccccatgtaaaatatttttgatttgatttac 47021943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 47022065 - 47022019
Alignment:
Q  6 ttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  47022065 ttttattttgattcacccctttgtaaaatatttttgttttgatttac 47022019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7112550 - 7112599
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    |||||||||||||||||| ||||  ||||||| ||||||||||| |||||    
T  7112550 aaaatttttattttgatttaccccttgtaaaacatttttgttttgattta 7112599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 2472608 - 2472640
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  2472608 acctatattacagggggtaaagacctattaacc 2472640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 4646992 - 4646944
Alignment:
Q  3 aatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||  |||| ||||||||| |||||||||| ||||||    
T  4646992 aatttttattttgatataccccctgtaaaatgtttttgttttgatttac 4646944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 7112748 - 7112780
Alignment:
Q  205 tatattacagagggtaaagacctattaacctta 237  Q
    |||||||||| ||||||||||||||||||||||    
T  7112748 tatattacagggggtaaagacctattaacctta 7112780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 9439426 - 9439458
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  9439426 acctatattacagggggtaaagacctattaacc 9439458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 10028001 - 10028033
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  10028001 acctatattacagggggtaaagacctattaacc 10028033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 15790474 - 15790438
Alignment:
Q  1 aaaatttttattttgattcaccct-ctgtaaaatatt 36  Q
    |||||||||||||||||||||||| ||||||||||||    
T  15790474 aaaatttttattttgattcaccctcctgtaaaatatt 15790438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 18458826 - 18458858
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  18458826 acctatattacagggggtaaagacctattaacc 18458858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 25235807 - 25235775
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  25235807 acctatattacagggggtaaagacctattaacc 25235775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 26095847 - 26095815
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  26095847 acctatattacagggggtaaagacctattaacc 26095815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 26097051 - 26097083
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  26097051 acctatattacagggggtaaagacctattaacc 26097083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 47022093 - 47022125
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  47022093 acctatattacagggggtaaagacctattaacc 47022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50596162 - 50596114
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattt 49  Q
    ||||||| |||||||||||| || | |||||||||||||||||| ||||    
T  50596162 aaaatttatattttgattcatcccccgtaaaatatttttgttttgattt 50596114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3593396 - 3593458
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaatagg 63  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||    
T  3593396 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttacctccctaatagg 3593458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9286258 - 9286307
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  9286258 aaaatttttattttgattcaccccctgtaaaatatttttgttttgattta 9286307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24062397 - 24062334
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||||  | |||||||||    
T  24062397 aaaatttttattttgattcactcactgtaaaatatttttgttttgatttacccccctaataggc 24062334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3593574 - 3593524
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  3593574 aaaatttttattttgattcaccccctgttaaatatttttgttttgatttac 3593524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4840741 - 4840790
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  4840741 aaaatttttattttgattcaccc-ctgtaaaatatttttgttttgatttac 4840790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30245891 - 30245941
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  30245891 aaaatttttattttgattcaccccctataaaatatttttgttttgatttac 30245941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30246065 - 30246015
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  30246065 aaaatttttattttgattcaccccctgtaaaatattttagttttgatttac 30246015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 7576133 - 7576182
Alignment:
Q  2 aaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  7576133 aaatttttattttgattcaccccttgtaaaatatttttgttttaatttac 7576182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31886031 - 31885984
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattt 49  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  31886031 aaaatttttattttgattcaccc-ctgtaaaatatttttgttttgattt 31885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5334699 - 5334749
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| ||||||    
T  5334699 aaaatttttattttgatttaccccttgtaaaatatttttgttttgatttac 5334749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7054135 - 7054185
Alignment:
Q  1 aaaatttttattttgattcacc-ctctgtaaaatatttttgtttttattta 50  Q
    |||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  7054135 aaaatttttattttgattcacctccctgtaaaatatttttgttttgattta 7054185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13357589 - 13357525
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| ||||||||| ||||| ||| |||||||||||||||||||| ||||||| | |||||||||    
T  13357589 aaaaattttattttaattcatccccctgtaaaatatttttgttttgatttacgcccctaataggc 13357525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9286433 - 9286390
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||||||||   ||||||||||||||||||    
T  9286433 aaaatttttattttgattcaccccaagtaaaatatttttgtttt 9286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 12321007 - 12321065
Alignment:
Q  4 atttttattttgattcac-cctctgtaaaatatttttgtttttatttacgtctctaata 61  Q
    |||||||||||||||||  || |||||||||||||||||||| ||||||  ||||||||    
T  12321007 atttttattttgattcaatcccctgtaaaatatttttgttttgatttacccctctaata 12321065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12321182 - 12321132
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| ||   |||||||||||||||||||| ||||||    
T  12321182 aaaatttttattttgatttacatcctgtaaaatatttttgttttgatttac 12321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 29964648 - 29964603
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||    
T  29964648 tttttattttgattcacc-tctgtaaaatatgtttgttttgatttac 29964603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 234
Target Start/End: Original strand, 3593599 - 3593628
Alignment:
Q  205 tatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||||||||||||||||||||    
T  3593599 tatattacagagggtaaagacctattaacc 3593628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 56137 - 56177
Alignment:
Q  203 cctatattacagagggtaaagacctattaaccttattttat 243  Q
    |||||||||||| ||||||||||||||||||| || |||||    
T  56137 cctatattacagggggtaaagacctattaaccctactttat 56177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 1319178 - 1319221
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||    
T  1319178 tttattttgattcactc-ctgtaaaatatttttgttttgatttac 1319221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 3063507 - 3063539
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  3063507 acctatattacagggggtaaagacctattaacc 3063539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 10344083 - 10344051
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  10344083 acctatattacagggggtaaagacctattaacc 10344051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 13114431 - 13114399
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  13114431 acctatattacagggggtaaagacctattaacc 13114399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 14328670 - 14328702
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  14328670 acctatattacagggggtaaagacctattaacc 14328702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 14421680 - 14421712
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  14421680 acctatattacagggggtaaagacctattaacc 14421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 234
Target Start/End: Complemental strand, 18246176 - 18246148
Alignment:
Q  206 atattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||    
T  18246176 atattacagagggtaaagacctattaacc 18246148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 24387785 - 24387817
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  24387785 acctatattacagggggtaaagacctattaacc 24387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 29942467 - 29942499
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  29942467 acctatattacagggggtaaagacctattaacc 29942499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19624011 - 19623961
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19624011 aaaatttttattttgattcaccctctgtaaaatatttttgttttgatttac 19623961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5417268 - 5417218
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  5417268 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 5417218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12767168 - 12767118
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  12767168 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 12767118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22949483 - 22949433
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  22949483 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttac 22949433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30271600 - 30271663
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||||  | |||||||||    
T  30271600 aaaatttttattttgattcacctcctgtaaaatatttttgttttgatttacccccctaataggc 30271663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 25109887 - 25109937
Alignment:
Q  2 aaatttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  25109887 aaatttttattttgattcacccctctgtaaaatatttttgttttgatttac 25109937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30271778 - 30271729
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  30271778 aaaatttttattttgattcaccc-ctgtaaaatatttttgttttgatttac 30271729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27432821 - 27432757
Alignment:
Q  1 aaaatttttattttgattcaccctct-gtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| || |||||||||||||||||| ||||||  | |||||||||    
T  27432821 aaaatttttattttgattcacccccttgtaaaatatttttgttttgatttacccccctaataggc 27432757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 36867698 - 36867742
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  36867698 tttattttgattcaccccctgtaaaatatttttgttttcatttac 36867742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 5416120 - 5416167
Alignment:
Q  5 tttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  5416120 tttttattttgattcacccctctgtaaaatatttttgttttgatttac 5416167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7584305 - 7584353
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  7584305 aaaatttttattttgattcacc--ctgtaaaatatttttgttttgatttac 7584353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22949302 - 22949353
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  22949302 aaaatttttattttgattcacccccctgtaaaatatttttgttttgatttac 22949353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27760344 - 27760395
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  27760344 aaaatttttattttgattcaaccccctgtaaaatatttttgttttgatttac 27760395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29314016 - 29313953
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaatagg 63  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||   ||||||||||    
T  29314016 aaaatttttattttgattcaaccccctgtaaaatatttttgttttgatttatccctctaatagg 29313953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30586219 - 30586270
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttac 51  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  30586219 aaaaattttattttgattcaccctcctgtaaaatatttttgttttgatttac 30586270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30586399 - 30586348
Alignment:
Q  1 aaaatttttattttgattcacc-ctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  30586399 aaaatttttattttgattcacctccctgtaaaatatttttgttttgatttac 30586348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10979903 - 10979952
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  10979903 aaaatttttattttgattcaccc-ccgtaaaatatttttgttttgatttac 10979952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46902104 - 46902054
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||||  | ||||||||||||||||| ||||||    
T  46902104 aaaatttttattttgattcaccccatataaaatatttttgttttgatttac 46902054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 43767720 - 43767765
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||    
T  43767720 tttttattttgatttaccttctgtaaaatatttttgttttgattta 43767765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3548357 - 3548293
Alignment:
Q  1 aaaatttttattttgattcaccctct-gtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| |||||||||||||||||| || |||||||||||||||||| ||||||  | |||||||||    
T  3548357 aaaaattttattttgattcacccccttgtaaaatatttttgttttgatttacccccctaataggc 3548293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 49872947 - 49872887
Alignment:
Q  5 tttttattttgattcaccctct-gtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||||  | |||||||||    
T  49872947 tttttattttgattcacccccttgtaaaatatttttgttttgatttacccccctaataggc 49872887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36867858 - 36867815
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgttt 43  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  36867858 aaaatttttattttgattcacccccttgtaaaatatttttgttt 36867815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49872771 - 49872822
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttac 51  Q
    |||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  49872771 aaaagttttattttgattcacccccctgtaaaatatttttgttttgatttac 49872822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 53806798 - 53806735
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||| ||| |||||||| |||||||||||||  |||||||||| |||||| || |||||||||    
T  53806798 aaaatattttttttgatttaccctctgtaaaaattttttgttttgatttacctcactaataggc 53806735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25110062 - 25110013
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||||   |||||||||||||||||| ||||||    
T  25110062 aaaatttttattttgattcaccc-gagtaaaatatttttgttttgatttac 25110013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27760522 - 27760472
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| || |  ||||||||||||||||||| ||||||    
T  27760522 aaaatttttattttgatttactccttgtaaaatatttttgttttgatttac 27760472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43767893 - 43767831
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaatagg 63  Q
    |||||||||||||||||||| |   | ||||||||||||||||| ||||||  ||||||||||    
T  43767893 aaaatttttattttgattcaactcatataaaatatttttgttttgatttacccctctaatagg 43767831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46901928 - 46901978
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||  | |||| ||||||||||||||| ||||||    
T  46901928 aaaatttttattttgattcataccctgttaaatatttttgttttgatttac 46901978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12766994 - 12767030
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttt 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  12766994 aaaatttttattttgattcaccc-ctgtaaaatatttt 12767030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3548177 - 3548241
Alignment:
Q  1 aaaatttttattttgattcaccctct-gtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| |||||||||||||||||| |  |||||||||||||||||| ||||||  | |||||||||    
T  3548177 aaaaattttattttgattcacccccccgtaaaatatttttgttttgatttacccccctaataggc 3548241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 6510248 - 6510216
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  6510248 acctatattacagggggtaaagacctattaacc 6510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 19624034 - 19624066
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||| ||||||||||||||||    
T  19624034 acctatattacagaggataaagacctattaacc 19624066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 22949279 - 22949231
Alignment:
Q  202 acctatattacagagggtaaagacctattaac-ctt-attttatattga 248  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  22949279 acctatattacagggggtaaagacctattaactcttaattttatattga 22949231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 30271577 - 30271545
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||||||||||||| |||||||||    
T  30271577 acctatattacagagggtaaagaactattaacc 30271545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 47115586 - 47115618
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  47115586 acctatattacagggggtaaagacctattaacc 47115618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 49872973 - 49873005
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  49872973 acctatattacagggggtaaagacctattaacc 49873005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 49880761 - 49880793
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  49880761 acctatattacagggggtaaagacctattaacc 49880793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 51252285 - 51252221
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||| ||| |||||||| |||| | ||||||||||||||||||| |||||| || |||||||||    
T  51252285 aaaatattttttttgatttacccccctgtaaaatatttttgttttgatttacctccctaataggc 51252221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 51460787 - 51460819
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  51460787 acctatattacagggggtaaagacctattaacc 51460819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 54567767 - 54567799
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  54567767 acctatattacagggggtaaagacctattaacc 54567799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31861547 - 31861610
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||  | |||||||||    
T  31861547 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttacccccctaataggc 31861610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31861727 - 31861664
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||  | |||||||||    
T  31861727 aaaatttttattttgattcaccccctgtaaaatatttttgttttgatttacccccctaataggc 31861664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 20688851 - 20688914
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||  | |||||||||    
T  20688851 aaaatttttattttaattcaccccctgtaaaatatttttgttttgatttacccccctaataggc 20688914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 36354783 - 36354722
Alignment:
Q  2 aaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||| ||  ||||||||    
T  36354783 aaatttttattttgattcaccc-ctgtaaaatatttttgttttgatttacctccttaataggc 36354722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42119289 - 42119240
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  42119289 aaaatttttattttgattcaccc-ctgtaaaatatttttgttttgatttac 42119240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24098489 - 24098538
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  24098489 aaaatttttattttgattcaccccctgtaaaataattttgttttgattta 24098538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26592378 - 26592429
Alignment:
Q  1 aaaatttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  26592378 aaaatttttattttgattcacccatctataaaatatttttgttttgatttac 26592429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20689030 - 20688981
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  20689030 aaaatttctattttgattcaccc-ctgtaaaatatttttgttttgatttac 20688981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21148853 - 21148903
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttattta 50  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  21148853 aaaatttttattttgattcaacccgctgtaaaatatttttgttttgattta 21148903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 33483126 - 33483064
Alignment:
Q  2 aaatttttattttgattcacc-ctctgtaaaatatttttgtttttatttacgtctctaatagg 63  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| |||||  || ||||||||    
T  33483126 aaattcttattttgattcacctctctgtaaaatatttttgttttgatttatctccctaatagg 33483064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35798684 - 35798634
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||  | |||||||||||||||||| ||||||    
T  35798684 aaaatttttattttgattcacctccagtaaaatatttttgttttgatttac 35798634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 39153620 - 39153562
Alignment:
Q  6 ttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||  | |||||||||    
T  39153620 ttttattttgatttaccccctgtaaaatatttttgttttgatttactcccctaataggc 39153562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12382881 - 12382945
Alignment:
Q  1 aaaatttttattttgattcacc-ctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| | | | |||||||||||||||||| |||||| || |||||||||    
T  12382881 aaaatttttattttgattcagctcccggtaaaatatttttgttttgatttacctccctaataggc 12382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21149102 - 21149038
Alignment:
Q  1 aaaatttttatttt-gattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||| |||| |||| |||||||||||||||||||| ||||||  | |||||||||    
T  21149102 aaaatttttatttttgatttaccccctgtaaaatatttttgttttgatttactcccctaataggc 21149038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 36993007 - 36993039
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  36993007 acctatattacagagggtaaagacctattaacc 36993039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 37204975 - 37204931
Alignment:
Q  7 tttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||    
T  37204975 tttattttgatttaccccctgtaaaatatttttgttttgatttac 37204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 233
Target Start/End: Original strand, 16305133 - 16305164
Alignment:
Q  202 acctatattacagagggtaaagacctattaac 233  Q
    ||||||||||||||||||||||||||||||||    
T  16305133 acctatattacagagggtaaagacctattaac 16305164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24098664 - 24098622
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  24098664 aaaatttttattttgattcaccc-gtgtaaaatatttttgtttt 24098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33052872 - 33052923
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||| ||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  33052872 aaaaattttattttgattcaaccccctgtaaaatatttttgttttgatttac 33052923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35798515 - 35798558
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||||| |  ||||||||||||||||||||    
T  35798515 aaaatttttattttgattcatcacctgtaaaatatttttgtttt 35798558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40339386 - 40339437
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||||||    
T  40339386 aaaattttgattttgattcaaccccctgtaaaatatttttgttttgatttac 40339437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40339539 - 40339500
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatattttt 39  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  40339539 aaaatttttattttgattcacccctctgtaaaatattttt 40339500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9227085 - 9227035
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||| ||| |||||||| |||| |||||||||||||||||||| ||||||    
T  9227085 aaaatattttttttgatttaccccctgtaaaatatttttgttttgatttac 9227035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11664129 - 11664178
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| | | ||||||||||||||||||||| ||||||    
T  11664129 aaaatttttattttgatttatc-tctgtaaaatatttttgttttgatttac 11664178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 15061848 - 15061886
Alignment:
Q  203 cctatattacagagggtaaagacctattaaccttatttt 241  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  15061848 cctatattacagggggtaaagacctattaaccctatttt 15061886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22551748 - 22551699
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| |||| |||||||||| ||||||||| ||||||    
T  22551748 aaaatttttattttgatttaccccctgtaaaata-ttttgttttgatttac 22551699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 24329513 - 24329467
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||  | ||||||||||||||||||| ||||||    
T  24329513 tttttattttgattcactatttgtaaaatatttttgttttgatttac 24329467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 26034878 - 26034832
Alignment:
Q  202 acctatattacagagggtaaagacctattaaccttattttatattga 248  Q
    ||||||||| ||||||||||||||||||||||| | |||| ||||||    
T  26034878 acctatattgcagagggtaaagacctattaacccttttttttattga 26034832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35030919 - 35030873
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgttttta 46  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  35030919 aaaatttttattttgattcaatctcctgtaaaatatttttgttttta 35030873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39418952 - 39418902
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||| ||| |||||||| ||||||| ||||||||||||||||| ||||||    
T  39418952 aaaatattttttttgatttaccctctataaaatatttttgttttgatttac 39418902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 9226925 - 9226969
Alignment:
Q  20 accctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| |||||||||||||||||||| |||||| || |||||||||    
T  9226925 accccctgtaaaatatttttgttttgatttacctccctaataggc 9226969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 10976771 - 10976803
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  10976771 acctatattacagggggtaaagacctattaacc 10976803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 12330909 - 12330973
Alignment:
Q  1 aaaatttttattttgattcaccctct-gtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||| ||| |||||||| ||||||| |||||||||||||||||| ||||||  | |||||||||    
T  12330909 aaaatattttttttgatttaccctcttgtaaaatatttttgttttgatttacccccctaataggc 12330973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12383045 - 12383005
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgt 41  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  12383045 aaaatttttattttaattcaccccccgtaaaatatttttgt 12383005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 12399610 - 12399642
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  12399610 acctatattacagggggtaaagacctattaacc 12399642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 20698520 - 20698472
Alignment:
Q  3 aatttttattttgattcac-cctctgtaaaatatttttgtttttattta 50  Q
    ||||||||||||||||||| || || ||||||||||||||||| |||||    
T  20698520 aatttttattttgattcacacccctataaaatatttttgttttgattta 20698472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 22551555 - 22551523
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  22551555 acctatattacagggggtaaagacctattaacc 22551523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 29104477 - 29104445
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  29104477 acctatattacagggggtaaagacctattaacc 29104445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 37205004 - 37205036
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||| ||||||||    
T  37205004 acctatattacagagggtaaagacatattaacc 37205036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 38482351 - 38482319
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  38482351 acctatattacagggggtaaagacctattaacc 38482319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38482374 - 38482422
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattt 49  Q
    |||| ||||||||||||||| || ||||||||||||||| |||| ||||    
T  38482374 aaaaattttattttgattcatcccctgtaaaatatttttattttgattt 38482422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28884 - 28834
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  28884 aaaatttttattttgattcaccccctgtaaaatatttttgttttaatttac 28834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28127 - 28177
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  28127 aaaatttttactttgattcaccccctgtaaaatatttttgttttgatttac 28177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 91282 - 91232
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  91282 aaaatttttattttgattcaccctctgtaaaatatttttattttgatttac 91232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 91083 - 91051
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  91083 acctatattacagggggtaaagacctattaacc 91051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3823 - 3885
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||  ||||||||    
T  3823 aaaatttttattttgattcaccc-ctgtaaaatatttttgttttgatttacctccataataggc 3885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3998 - 3949
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  3998 aaaaattttattttgattcaccc-ctgtaaaatatttttgttttgatttac 3949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3702 - 3765
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| |||||||||||||||||| || ||||||||||||||||| ||||||  |||||||||||    
T  3702 aaaaattttattttgattcaccccctataaaatatttttgttttgatttacccctctaataggc 3765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4105281 - 4105219
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |||||| || |||||||||    
T  4105281 aaaatttttattttgattcaccccctataaaatatttttgttttgatttacctc-ctaataggc 4105219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7989024 - 7988961
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||||  | |||||||||    
T  7989024 aaaaattttattttgattcaccccctgtaaaatatttttgttttgatttacccccctaataggc 7988961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8315984 - 8315923
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||    
T  8315984 aaaatttttattttgattcaccc-ctgtaaaatatttttgttttgatttacctc-ctaataggc 8315923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34985176 - 34985218
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgttt 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  34985176 aaaatttttattttgattcaccctctgtaaaatatgtttgttt 34985218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 27198375 - 27198326
Alignment:
Q  2 aaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  27198375 aaatttttatttttattcaccccctgtaaaatatttttgttttgatttac 27198326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25601769 - 25601833
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| ||||||  | |||||||||    
T  25601769 aaaatttttattttgattcaaccctttgtaaaatatttttgttttgatttacccccctaataggc 25601833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27198200 - 27198264
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaata-tttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| ||||||  | |||||||||    
T  27198200 aaaatttttattttgattcaccccctgtaaaatattttttgttttgatttacccccctaataggc 27198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 960326 - 960377
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  960326 aaaatttttattttgattcaaccccctgtaaaatatttttgttttgatttac 960377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7988848 - 7988891
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  7988848 aaaatttttattttgatttaccccctgtaaaatatttttgtttt 7988891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29726160 - 29726223
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||| ||||||  | |||||||||    
T  29726160 aaaacttttattttgattcaccctatgtaaaatatttttggtttgatttacccccctaataggc 29726223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43121136 - 43121198
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||||  | |||||||||    
T  43121136 aaaaattttattttgattcaccc-ctgtaaaatatttttgttttgatttactcccctaataggc 43121198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4105105 - 4105154
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  4105105 aaaatttttattttgattcaccc-ctataaaatatttttgttttgatttac 4105154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25601949 - 25601899
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||| |||||||||||| |||| |||||||||||||||||||| ||||||    
T  25601949 aaaatgtttattttgatttaccccctgtaaaatatttttgttttgatttac 25601899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 26447580 - 26447534
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||    
T  26447580 tttttattttgattcatcccctgtaaaatatttttgttttgatttac 26447534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34019125 - 34019075
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||| ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  34019125 aaaaattttattttgattcaccccttgtaaaatatttttgttttgatttac 34019075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 8388175 - 8388236
Alignment:
Q  5 tttttattttgattca--ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||| |  ||| |||||||||||||||||||| ||||||  |||||||||||    
T  8388175 tttttattttgatttaacccccctgtaaaatatttttgttttgatttacccctctaataggc 8388236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12330389 - 12330439
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||| ||| |||||||| |||| |||||||||||||||||||| ||||||    
T  12330389 aaaatattttttttgatttaccccctgtaaaatatttttgttttgatttac 12330439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 27987525 - 27987480
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  27987525 tttttattttgattcaccc-ctgcaaaatatttttgttttgatttac 27987480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 28044827 - 28044782
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  28044827 tttttattttgattcaccc-ctgcaaaatatttttgttttgatttac 28044782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 27164683 - 27164716
Alignment:
Q  203 cctatattacagagggtaaagacctattaacctt 236  Q
    |||||||||||| |||||||||||||||||||||    
T  27164683 cctatattacagggggtaaagacctattaacctt 27164716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 43400925 - 43400958
Alignment:
Q  202 acctatattacagagggtaaagacctattaacct 235  Q
    |||||||||| |||||||||||||||||||||||    
T  43400925 acctatattagagagggtaaagacctattaacct 43400958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 960521 - 960553
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  960521 acctatattacagggggtaaagacctattaacc 960553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 2696666 - 2696707
Alignment:
Q  8 ttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||  |||||||||||||||||| ||||||    
T  2696666 ttattttgattcaccct--gtaaaatatttttgttttgatttac 2696707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 12330366 - 12330334
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  12330366 acctatattacagggggtaaagacctattaacc 12330334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 14329624 - 14329656
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  14329624 acctatattacagggggtaaagacctattaacc 14329656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 25277730 - 25277762
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  25277730 acctatattacagggggtaaagacctattaacc 25277762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 27543649 - 27543681
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  27543649 acctatattacagggggtaaagacctattaacc 27543681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 29309598 - 29309566
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  29309598 acctatattacagggggtaaagacctattaacc 29309566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 34985346 - 34985378
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  34985346 acctatattacagggggtaaagacctattaacc 34985378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13279418 - 13279355
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||  | |||||||||    
T  13279418 aaaatttttattttaattcaccccctgtaaaatatttttgttttgatttaccgccctaataggc 13279355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23314779 - 23314830
Alignment:
Q  1 aaaatttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  23314779 aaaatttttattttgattcacccctctgtaaaatatttttgttttgatttac 23314830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24204869 - 24204920
Alignment:
Q  1 aaaatttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  24204869 aaaatttttattttgattcacccctctgtaaaatatttttgttttgatttac 24204920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1693453 - 1693403
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  1693453 aaaatttttattttgattcatcccctgtaaaatatttttgttttgatttac 1693403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16902160 - 16902210
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  16902160 aaaattttgattttgatttaccctctgtaaaatatttttgttttgatttac 16902210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19979707 - 19979756
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  19979707 aaaatttttattttgattcaccc-ctgtaaaatatttttgttttgatttac 19979756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 38193022 - 38193080
Alignment:
Q  6 ttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||  |||||||||||    
T  38193022 ttttattttgatttaccccctgtaaaatatttttgttttgatttacccctctaataggc 38193080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38193195 - 38193145
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  38193195 aaaatttttattttgattcaacccctgtaaaatatttttgttttgatttac 38193145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19410566 - 19410630
Alignment:
Q  1 aaaatttttattttgattcac-cctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||||||  | |||||||||    
T  19410566 aaaatttttattttgattcactcccctgtaaaatatttttgttttgatttacccccctaataggc 19410630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31186724 - 31186788
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| ||||||  | |||||||||    
T  31186724 aaaatttttattttgattcacccccctgtaaaatatttttgttttgatttacccccctaataggc 31186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13279240 - 13279291
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  13279240 aaaatttttattttgattcacccccctgtaaaatatttttgttttgatttac 13279291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19272274 - 19272337
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| || ||||||||| |||||||||| ||||||  | |||||||||    
T  19272274 aaaatttttattttgattcagcccctgtaaaatttttttgttttaatttacccccctaataggc 19272337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5021781 - 5021731
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||   |||||||||||||||||||| ||||||    
T  5021781 aaaatttttattttgattcacttcctgtaaaatatttttgttttgatttac 5021731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19410753 - 19410703
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||| ||||||||||||| |||| |||||||||||||||||||| ||||||    
T  19410753 aaaacttttattttgatttaccccctgtaaaatatttttgttttgatttac 19410703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23371681 - 23371631
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||| | || |||||||||||||||||||| ||||||    
T  23371681 aaaatttttattttgatttatcccctgtaaaatatttttgttttgatttac 23371631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26930690 - 26930740
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||| |||||||| || |||||||||||||||||||| ||||||    
T  26930690 aaaatttttatgttgattcaacccctgtaaaatatttttgttttgatttac 26930740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 39580164 - 39580119
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  39580164 tttttattttgattcaccc-ctgtaaaatatttttgttttgatttac 39580119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43251567 - 43251616
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  43251567 aaaaattttattttgattcaccc-ctgtaaaatatttttgttttgatttac 43251616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 43251741 - 43251695
Alignment:
Q  5 tttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  43251741 tttttattttgattcaccccctgttaaatatttttgttttgatttac 43251695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44414080 - 44414031
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  44414080 aaaatttttattttgattcaccc-ctctaaaatatttttgttttgatttac 44414031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 23784812 - 23784764
Alignment:
Q  2 aaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  23784812 aaatttttattttgattcatcc-ctgtaaaatatttttgttttgatttac 23784764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 24205350 - 24205289
Alignment:
Q  4 atttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||||  | |||||||||    
T  24205350 atttttattttgattcacccccctgtaaaatatttttgttttgatttacccccctaataggc 24205289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 24206868 - 24206807
Alignment:
Q  4 atttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||||  | |||||||||    
T  24206868 atttttattttgattcacccccctgtaaaatatttttgttttgatttacccccctaataggc 24206807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39118933 - 39118982
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttattta 50  Q
    ||||||||||||||||| ||  |||||||||||||||||||||| |||||    
T  39118933 aaaatttttattttgatccattctctgtaaaatatttttgttttgattta 39118982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 1693277 - 1693337
Alignment:
Q  5 tttttattttgattcac-cctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||  | |||||||||    
T  1693277 tttttattttgattcacacccctgtaaaatatttttgttttgatttacccccctaataggc 1693337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 10688491 - 10688459
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  10688491 acctatattacagagggtaaagacctattaacc 10688459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 10980620 - 10980652
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  10980620 acctatattacagagggtaaagacctattaacc 10980652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 13882636 - 13882604
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  13882636 acctatattacagagggtaaagacctattaacc 13882604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 31186701 - 31186669
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  31186701 acctatattacagagggtaaagacctattaacc 31186669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35913105 - 35913149
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttt 44  Q
    ||||||||||||||||||||||| | |||||||||||||||||||    
T  35913105 aaaatttttattttgattcacccccttgtaaaatatttttgtttt 35913149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 45163968 - 45164032
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||||||||||||| | || |||||||||||||||| ||||||  | |||||||||    
T  45163968 aaaatttttattttgattcacccccttgcaaaatatttttgttttgatttacccccctaataggc 45164032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16902339 - 16902288
Alignment:
Q  1 aaaatttttattttgattcaccct-ctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||| ||||||    
T  16902339 aaaatttttattttgattcaacctcctgtaaaatatttttgctttgatttac 16902288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19272450 - 19272388
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||||||||||||||||| ||||| |||||||||||| |||| ||||||  | |||||||||    
T  19272450 aaaatttttattttgattca-cctctataaaatatttttattttgatttacccccctaataggc 19272388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21298069 - 21298120
Alignment:
Q  1 aaaatttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    |||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  21298069 aaaaattttattttgattcacccctttgtaaaatatttttgttttaatttac 21298120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31186906 - 31186855
Alignment:
Q  1 aaaatttttattttgattcaccc-tctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||  |||||| ||||||||||||||||||||| ||||||    
T  31186906 aaaatttttattttggctcacccctctgtaaaatatttttgttttgatttac 31186855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39119112 - 39119061
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatat-ttttgtttttatttac 51  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||| ||||||    
T  39119112 aaaatttttattttgattcacctcctgtaaaatattttttgttttgatttac 39119061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 234
Target Start/End: Complemental strand, 48168882 - 48168851
Alignment:
Q  203 cctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||||||||||||||||||||||    
T  48168882 cctatattacagagggtaaagacctattaacc 48168851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23784639 - 23784688
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||| ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  23784639 aaaaattttattttgattcaccca-tgtaaaatatttttgttttaatttac 23784688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 1594148 - 1594180
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  1594148 acctatattacagggggtaaagacctattaacc 1594180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3624186 - 3624142
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttt 44  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||    
T  3624186 aaaatttttgttttgatttaccctcctgtaaaatatttttgtttt 3624142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 6269561 - 6269529
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  6269561 acctatattacagggggtaaagacctattaacc 6269529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 9915684 - 9915652
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  9915684 acctatattacagggggtaaagacctattaacc 9915652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 9923596 - 9923564
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  9923596 acctatattacagggggtaaagacctattaacc 9923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 13279441 - 13279473
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  13279441 acctatattacagggggtaaagacctattaacc 13279473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13286866 - 13286802
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||| ||||||  | |||||||||    
T  13286866 aaaatttttatttcgatttaaccccctgtaaaatatttttgttttgatttacccccctaataggc 13286802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 13797635 - 13797667
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  13797635 acctatattacagggggtaaagacctattaacc 13797667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 19272473 - 19272505
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  19272473 acctatattacagggggtaaagacctattaacc 19272505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 23371482 - 23371450
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  23371482 acctatattacagggggtaaagacctattaacc 23371450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 23784617 - 23784585
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  23784617 acctatattacagggggtaaagacctattaacc 23784585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 24555925 - 24555965
Alignment:
Q  202 acctatattacagagggtaaagacctattaaccttatttta 242  Q
    ||||||||||||| ||||||| ||||||||||| |||||||    
T  24555925 acctatattacagggggtaaaaacctattaaccctatttta 24555965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26050407 - 26050363
Alignment:
Q  1 aaaatttttattttgattc-accctctgtaaaatatttttgtttt 44  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||    
T  26050407 aaaatttttattttgattcaaccccctgtaaaatacttttgtttt 26050363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26059766 - 26059722
Alignment:
Q  1 aaaatttttattttgattc-accctctgtaaaatatttttgtttt 44  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||    
T  26059766 aaaatttttattttgattcaaccccctgtaaaatacttttgtttt 26059722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26930867 - 26930823
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttt 44  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||    
T  26930867 aaaatttttattttgattcaccccgctgtaaaatatatttgtttt 26930823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 38193218 - 38193250
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  38193218 acctatattacagggggtaaagacctattaacc 38193250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 39580190 - 39580222
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  39580190 acctatattacagggggtaaagacctattaacc 39580222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 48945217 - 48945185
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||||||||||| |||||||||||    
T  48945217 acctatattacagagggtaaaaacctattaacc 48945185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38105 - 38155
Alignment:
Q  1 aaaatttttattttgattcaccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  38105 aaaatttttattttgattcaccccgtgtaaaatatttttgttttgatttac 38155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2060 - 1996
Alignment:
Q  1 aaaatttttattttgattcaccctct-gtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||||||  | |||||||||    
T  2060 aaaaattttattttgattcaccctcttgtaaaatatttttgttttgatttacccccctaataggc 1996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 1887 - 1934
Alignment:
Q  5 tttttattttgattcaccctct-gtaaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||||    
T  1887 tttttattttgattcacccccttgtaaaatatttttgttttgatttac 1934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 1860 - 1828
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  1860 acctatattacagggggtaaagacctattaacc 1828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8097 - 8033
Alignment:
Q  1 aaaatttttattttgattcaccctc-tgtaaaatatttttgtttttatttacgtctctaataggc 64  Q
    |||||| ||||||||||||||| || ||||||||||||||||||| ||||||  | |||||||||    
T  8097 aaaattgttattttgattcaccatcctgtaaaatatttttgttttgatttacccccctaataggc 8033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7914 - 7967
Alignment:
Q  1 aaaatttttattttgattcaccctctg---taaaatatttttgtttttatttac 51  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||| ||||||    
T  7914 aaaatttttattttgattcaccccctgtaataaaatatttttgttttgatttac 7967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 8119 - 8151
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  8119 acctatattacagtgggtaaagacctattaacc 8151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 660 - 692
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    |||||||||||||||||||||||||||||||||    
T  660 acctatattacagagggtaaagacctattaacc 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 237
Target Start/End: Complemental strand, 869 - 834
Alignment:
Q  202 acctatattacagagggtaaagacctattaacctta 237  Q
    |||||||||||||||| |||||||||||||||||||    
T  869 acctatattacagaggataaagacctattaacctta 834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4664 - 4613
Alignment:
Q  1 aaaatttttattttgattca-ccctctgtaaaatatttttgtttttatttac 51  Q
    |||||||||||||||||||| ||| || ||||||||||||||||| ||||||    
T  4664 aaaatttttattttgattcaaccccctataaaatatttttgttttgatttac 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 4175 - 4207
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  4175 acctatattacagggggtaaagacctattaacc 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 4451 - 4483
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  4451 acctatattacagggggtaaagacctattaacc 4483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 34850 - 34882
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  34850 acctatattacagggggtaaagacctattaacc 34882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 26341 - 26309
Alignment:
Q  202 acctatattacagagggtaaagacctattaacc 234  Q
    ||||||||||||| |||||||||||||||||||    
T  26341 acctatattacagggggtaaagacctattaacc 26309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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