View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12250_high_1 (Length: 333)

Name: NF12250_high_1
Description: NF12250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12250_high_1
NF12250_high_1
[»] scaffold0133 (2 HSPs)
scaffold0133 (1-295)||(9379-9673)
scaffold0133 (1-290)||(13727-14007)
[»] chr6 (11 HSPs)
chr6 (1-277)||(16781977-16782253)
chr6 (13-253)||(16658896-16659134)
chr6 (81-171)||(16988403-16988490)
chr6 (19-143)||(17070399-17070523)
chr6 (19-143)||(16839375-16839499)
chr6 (82-253)||(16867041-16867210)
chr6 (14-143)||(18872327-18872457)
chr6 (19-143)||(16798062-16798186)
chr6 (89-143)||(18869850-18869905)
chr6 (14-143)||(18586845-18586975)
chr6 (14-143)||(18793764-18793894)
[»] scaffold0256 (1 HSPs)
scaffold0256 (1-295)||(10022-10293)
[»] chr3 (1 HSPs)
chr3 (19-267)||(38938380-38938624)
[»] chr5 (1 HSPs)
chr5 (103-198)||(11983113-11983206)
[»] scaffold0144 (1 HSPs)
scaffold0144 (81-143)||(38442-38504)
[»] chr8 (1 HSPs)
chr8 (89-140)||(13379060-13379112)
[»] scaffold0511 (1 HSPs)
scaffold0511 (14-143)||(10247-10377)
[»] scaffold0230 (1 HSPs)
scaffold0230 (14-143)||(5567-5697)


Alignment Details
Target: scaffold0133 (Bit Score: 243; Significance: 1e-135; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 9379 - 9673
Alignment:
Q  1 tttctagacagactttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaag 100  Q
    |||||||| || ||||| ||||| ||||||||||||||||| ||||||| | ||||||||||||||||| ||| || |||||||||||||||||||||||    
T  9379 tttctagataggctttgggtcaattctccaacacccaaataggtagcaagctcctcttgtacaaatgatccgaggttttgaatcaagattccaagtaaag 9478  T
Q  101 catcagccattttcagatatgagaacagaaatgaatcaaagttgtttggattggagatgactttgctctaggaagatgaaatatgagttgttatttgttt 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9479 catcagccattttcagatgtgagaacagaaatgaatcaaagttgtttggattggagatgattttgctctaggaagatgaaatatgagttgttatttgttt 9578  T
Q  201 tcaaagattatatattaaatcagtggatgtagttcttctgcaacatgtcaaaattggctgctatagaaaaataaataattagtgaatgacggtgg 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9579 tcaaagattatatattaaatcagtggatgtagttcttctgcaacatgtcaaaattggctgctatagaaaaataaataattagtgaatgacagtgg 9673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 13727 - 14007
Alignment:
Q  1 tttctagacagactttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaag 100  Q
    |||||||| || ||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||    
T  13727 tttctagataggctttgggtcaattctccaacacccaaataggtagcaaactcctcttgtacaaatgatccgaggttttgaatcaagattccaagtaaag 13826  T
Q  101 catcagccattttcagatatgagaacagaaatgaatcaaagttgtttggattggagatgactttgctctaggaagatgaaatatgagttgttatttgttt 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13827 catcagccattttcagatgtgagaacagaaatgaatcaaagttgtttggattggagatgattttgctctaggaagatgaaatatgagttgttatttgttt 13926  T
Q  201 tcaaagattatatattaaatcagtggatgtagttcttctgcaacatgtcaaaattggctgctatagaaaaataaataattagtgaatgac 290  Q
    ||||||||||||||||||||||||||||||||||||||         || ||||||||||||||||||||||||||||||||||||||||    
T  13927 tcaaagattatatattaaatcagtggatgtagttcttc---------tccaaattggctgctatagaaaaataaataattagtgaatgac 14007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 16781977 - 16782253
Alignment:
Q  1 tttctagacagactttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaag 100  Q
    |||||||| || ||||| ||||| ||||||||||||||||| ||||||| | ||||||||||||| ||| ||| || |||||||| ||| ||||||||||    
T  16781977 tttctagatagtctttgggtcaattctccaacacccaaataggtagcaagctcctcttgtacaaaagatccgaggttttgaatcacgataccaagtaaag 16782076  T
Q  101 catcagccattttcagatatgagaacagaaatgaatcaaagttgtttggattggagatgactttgctctaggaagatgaaatatgagttgttatttgttt 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16782077 catcagccattttcagatgtgagaacagaaatgaatcaaagttgtttagattagagatgactttgctctaggaagatgaaatatgagttgttatttgttt 16782176  T
Q  201 tcaaagattatatattaaatcagtggatgtagttcttctgcaacatgtcaaaattggctgctatagaaaaataaata 277  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| ||| || ||||| ||||||||||||| |||||    
T  16782177 tcaaagattatctattaaatcagtggatgtagtttttctgcaacttgtgaatattggttgctatagaaaaaaaaata 16782253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 16658896 - 16659134
Alignment:
Q  13 ctttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccattt 112  Q
    ||||| ||||| ||||||||||||||| | |  |||| | ||||| | ||||| ||| ||| || ||  |||| ||||||||||||||| ||||||||||    
T  16658896 ctttgggtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccgaggttttctatcacgattccaagtaaagcttcagccattt 16658995  T
Q  113 t-cagatatgagaacagaaatgaatcaaagttgtttggattggagat-gactttgctctaggaagatgaaatatgagttgttatttgttttcaaagatta 210  Q
    |  || |||||||||||||||||| |||    |||||| |||||||| ||||||||| | ||||| || |||||| ||| |||||||||||||  |  ||    
T  16658996 tgtaggtatgagaacagaaatgaaacaa---ggtttggtttggagatagactttgcttttggaagttg-aatatgcgttattatttgttttcatgggcta 16659091  T
Q  211 tatattaaatcagtggatgtagttcttctgcaacatgtcaaaa 253  Q
    | ||||||||| |||| || ||||||  |||||| ||||||||    
T  16659092 tttattaaatcggtggttgcagttctgatgcaacttgtcaaaa 16659134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 16988403 - 16988490
Alignment:
Q  81 aatcaagattccaagtaaagcatcagccattttcagatatgagaacagaaatgaatcaaagttgtttggattggagatgactttgctctag 171  Q
    ||||| ||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||    ||||||||||| |||||||||||||||    
T  16988403 aatcacgattccaagtaaagcgtcagccatttacagatattagaacagaaatgaaccaaa---ttttggattggaaatgactttgctctag 16988490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 17070399 - 17070523
Alignment:
Q  19 gtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccattttcagat 118  Q
    ||||| ||||||||||||||| | |  |||| | ||||| | ||||| ||| ||| || || ||||| ||||||||||||||| ||||||||||  |||     
T  17070399 gtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccgaggttttcaatcacgattccaagtaaagcttcagccatttcgagaa 17070498  T
Q  119 atgagaacagaaatgaatcaaagtt 143  Q
    ||| |||||||||||||||||||||    
T  17070499 atgtgaacagaaatgaatcaaagtt 17070523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 16839375 - 16839499
Alignment:
Q  19 gtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccattttcagat 118  Q
    ||||| ||||||||||||||| | |  |||| | ||||| | ||||| ||| ||| || || ||||| |||||||| |||||| ||||||||||  |||     
T  16839375 gtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccgaggttttcaatcacgattccaattaaagcgtcagccatttcgagaa 16839474  T
Q  119 atgagaacagaaatgaatcaaagtt 143  Q
    ||| |||||||||||||||||||||    
T  16839475 atgtgaacagaaatgaatcaaagtt 16839499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 16867210 - 16867041
Alignment:
Q  82 atcaagattccaagtaaagcatcagccattttc-agatatgagaacagaaatgaatcaaagttgtttggattggagat-gactttgctctaggaagatga 179  Q
    |||| ||||||||  ||||| |||||||||||  || |||||||||||||||||| ||| |||   ||| |||||||| ||||||||| | ||||| |||    
T  16867210 atcacgattccaatcaaagcttcagccattttgtaggtatgagaacagaaatgaaacaaggtt---tggtttggagatagactttgcttttggaagttga 16867114  T
Q  180 aatatgagttgttatttgttttcaaagattatatattaaatcagtggatgtagttcttctgcaacatgtcaaaa 253  Q
    | ||||  ||||||||||||||||| | |||| |||||| || |||| || ||||||  |||||| ||||||||    
T  16867113 a-tatgctttgttatttgttttcaagggttatttattaactcggtggttgcagttctgatgcaacttgtcaaaa 16867041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 18872457 - 18872327
Alignment:
Q  14 tttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccatttt 113  Q
    |||| ||||| ||| ||||||||||| | || | || | ||||| | ||||| ||| ||| || ||||||||   ||||||||||| |||||||||||||    
T  18872457 tttgtgtcaattcttcaacacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggttttgaatcacagttccaagtaaaacatcagccatttt 18872358  T
Q  114 -cagatatgagaacagaaatgaatcaaagtt 143  Q
     ||| || |||||||||||||||||||||||    
T  18872357 gcaggtacgagaacagaaatgaatcaaagtt 18872327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 16798062 - 16798186
Alignment:
Q  19 gtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccattttcagat 118  Q
    ||||| ||||||||||||||| | |  |||| | ||||| | ||||| ||| ||| || || ||||| |||||||| |||||| ||||||||||  |||     
T  16798062 gtcaattctccaacacccaaaaaggatgcaatctcctctcgaacaaaagatccgaggttttcaatcacgattccaattaaagcgtcagccatttcgagaa 16798161  T
Q  119 atgagaacagaaatgaatcaaagtt 143  Q
    ||| ||||||||||| |||||||||    
T  16798162 atgtgaacagaaatgtatcaaagtt 16798186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 18869905 - 18869850
Alignment:
Q  89 ttccaagtaaagcatcagccattttc-agatatgagaacagaaatgaatcaaagtt 143  Q
    ||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||    
T  18869905 ttccaagtaaaacatcagccattttccagataagagaacataaatgaatcaaagtt 18869850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 18586975 - 18586845
Alignment:
Q  14 tttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccatttt 113  Q
    |||| ||||| ||||||||||||||| | || | || | ||||| | ||||| ||| ||| |  ||||||||   ||||||||||| |||||| ||||||    
T  18586975 tttgtgtcaattctccaacacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggatttgaatcacagttccaagtaaaacatcagtcatttt 18586876  T
Q  114 -cagatatgagaacagaaatgaatcaaagtt 143  Q
     ||| || | |||||||||||||||||||||    
T  18586875 gcaggtaagtgaacagaaatgaatcaaagtt 18586845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 18793894 - 18793764
Alignment:
Q  14 tttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccatttt 113  Q
    |||| ||||| ||||||||||||||| | || | || | ||||| | ||||| ||| ||| |  ||||||||   ||||||||||| |||||| ||||||    
T  18793894 tttgtgtcaattctccaacacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggatttgaatcacagttccaagtaaaacatcagtcatttt 18793795  T
Q  114 -cagatatgagaacagaaatgaatcaaagtt 143  Q
     ||| || | |||||||||||||||||||||    
T  18793794 gcaggtaagtgaacagaaatgaatcaaagtt 18793764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 10022 - 10293
Alignment:
Q  1 tttctagacagactttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaag 100  Q
    |||||||| || ||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||    
T  10022 tttctagataggctttgggtcaattctccaacacccaaataggtagcaaactcctcttgtacaaatgatccgaggttttgaatcaagattccaagtaaag 10121  T
Q  101 catcagccattttcagatatgagaacagaaatgaatcaaagttgtttggattggagatgactttgctctaggaagatgaaatatgagttgttatttgttt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||                   |||||| ||||||||||||||    
T  10122 catcagccattttcagatatgagaacagaaatgaatcaaagttgtttgga----agatga-------------------aatatgcgttgttatttgttt 10198  T
Q  201 tcaaagattatatattaaatcagtggatgtagttcttctgcaacatgtcaaaattggctgctatagaaaaataaataattagtgaatgacggtgg 295  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  10199 tcaaagattatatattaaatcagtggatgtagttcttttgcaacatgtcaaaattgactgctatagaaaattaaataattagtgaatgacagtgg 10293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 38938624 - 38938380
Alignment:
Q  19 gtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccatttt-caga 117  Q
    ||||||||||||||||||||||| || |||| | |||||   ||||||| | ||| |  || ||||| |||| |||||||||| ||||||||||| |||     
T  38938624 gtcaactctccaacacccaaataggttgcaagctcctctccaacaaatgttccgagggtttcaatcaggatttcaagtaaagcgtcagccattttgcagg 38938525  T
Q  118 tatgagaacagaaatgaatcaaagttgtttggattggagatgactttgctctaggaagatgaaatatgagttgttatttgttttcaaagattatatatta 217  Q
    ||||||||||||| |||||||| |||   ||||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||| | |||||    
T  38938524 tatgagaacagaa-tgaatcaaggtt---tggattggagatg-ctttgctctaggaagatgaaatatgtgtagttattttttttcaaagattgtctatta 38938430  T
Q  218 aatcagtggatgtagttcttctgcaacatgtcaaaattggctgctataga 267  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| ||||    
T  38938429 aatcagtggatgtagttcttctgcaacttgtcaatattggctgctgtaga 38938380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 198
Target Start/End: Complemental strand, 11983206 - 11983113
Alignment:
Q  103 tcagccatttt-cagatatgagaacagaaatgaatcaaagttgtttggattggagatgactttgctctaggaagatgaaatatgagttgttatttgt 198  Q
    ||||||||||| ||| ||| ||||||||||||||||   || ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  11983206 tcagccattttgcaggtatcagaacagaaatgaatc---gtggtttggattggagatgactttgctctatgaagatgaaatatgcgttattatttgt 11983113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 38442 - 38504
Alignment:
Q  81 aatcaagattccaagtaaagcatcagccattttcagatatgagaacagaaatgaatcaaagtt 143  Q
    ||||| |||| |||||||||| || |||||||||| | ||||||||||| |||||||||||||    
T  38442 aatcacgattgcaagtaaagcgtcggccattttcaaaaatgagaacagatatgaatcaaagtt 38504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 13379060 - 13379112
Alignment:
Q  89 ttccaagtaaagcatcagccatttt-cagatatgagaacagaaatgaatcaaa 140  Q
    ||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||    
T  13379060 ttccaagtaaaacatcagccattttgcaggtatgataacagaaatgaatcaaa 13379112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 10247 - 10377
Alignment:
Q  14 tttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccatttt 113  Q
    |||| ||||| ||||||||||||||| | || | || | ||||| | ||||| ||| ||| |  ||||||||   ||||||||||| |||||| ||||||    
T  10247 tttgtgtcaattctccaacacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggatttgaatcacagttccaagtaaaacatcagtcatttt 10346  T
Q  114 -cagatatgagaacagaaatgaatcaaagtt 143  Q
     ||| || | |||||||||||||||||||||    
T  10347 gcaggtaagtgaacagaaatgaatcaaagtt 10377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 5567 - 5697
Alignment:
Q  14 tttgcgtcaactctccaacacccaaataagtagcaaacccctcttgtacaaatgatacgatgtgttgaatcaagattccaagtaaagcatcagccatttt 113  Q
    |||| ||||| ||||||||||||||| | || | || | ||||| | ||||| ||| ||| |  ||||||||   ||||||||||| |||||| ||||||    
T  5567 tttgtgtcaattctccaacacccaaaaaggtcgaaagctcctctcgaacaaaagatccgaggatttgaatcacagttccaagtaaaacatcagtcatttt 5666  T
Q  114 -cagatatgagaacagaaatgaatcaaagtt 143  Q
     ||| || | |||||||||||||||||||||    
T  5667 gcaggtaagtgaacagaaatgaatcaaagtt 5697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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