View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12251_high_8 (Length: 374)
Name: NF12251_high_8
Description: NF12251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12251_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 20 - 359
Target Start/End: Complemental strand, 32207274 - 32206939
Alignment:
| Q |
20 |
gctaagaaaatgcaaaaatcaaagtagcaaaagttgcaataaaaacatagtagaaattcatgacatatatagttagttataagtgatgaaaactgaccag |
119 |
Q |
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| T |
32207274 |
gctaagaaaatgcaaaaatcgaagtagcaaaagttgcaataacaacatagtagaaattcatgacata----gttagttataagtgatgaaaactgaccag |
32207179 |
T |
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| Q |
120 |
ataataaggcaaagtaatgagtctttgaatgacaagccattgaaaaccataaccaagaaaccctaaaaaagcagacatgatcaaaaccacccacaatgga |
219 |
Q |
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| T |
32207178 |
ataataaggcaaagtaatgagtctttgaatgacaagccattgaaaaccataaccaagaagccctaaaaaagcagacatgatcaaaaccacccacaatgga |
32207079 |
T |
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| Q |
220 |
aaatacatgagtgtgacaccagaacaccaaccaaatgctttccccatatctgatgcaactgaaagagaattaagctgaagctgagttatatcaagaactg |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
32207078 |
aaatacatgagtgtgacaccagaacaccaaccaaatgctttccccatatctgatgcaactgagagagaattaagctgaagctgagttatatcaagaactg |
32206979 |
T |
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| Q |
320 |
atttcatctcagatgaatatgatgagaagtcaaagtttgt |
359 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
32206978 |
atttcatctcagatgaatatgatgagaagtcaaagtttgt |
32206939 |
T |
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