View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12251_low_3 (Length: 486)

Name: NF12251_low_3
Description: NF12251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12251_low_3
NF12251_low_3
[»] chr3 (97 HSPs)
chr3 (149-466)||(49202958-49203275)
chr3 (149-466)||(49191852-49192169)
chr3 (149-466)||(49188116-49188433)
chr3 (152-426)||(49212972-49213246)
chr3 (152-466)||(49208132-49208446)
chr3 (14-148)||(6065633-6065768)
chr3 (14-148)||(747042-747177)
chr3 (14-148)||(456192-456325)
chr3 (14-148)||(458569-458702)
chr3 (14-148)||(10621366-10621502)
chr3 (28-149)||(41849351-41849471)
chr3 (14-148)||(6063283-6063418)
chr3 (14-148)||(28412870-28413003)
chr3 (14-149)||(5522465-5522600)
chr3 (18-148)||(42990587-42990717)
chr3 (14-149)||(22114142-22114278)
chr3 (14-149)||(10955866-10956000)
chr3 (14-148)||(25533709-25533842)
chr3 (14-146)||(5191935-5192066)
chr3 (14-148)||(10084229-10084362)
chr3 (16-148)||(11168387-11168519)
chr3 (16-148)||(50494285-50494417)
chr3 (14-148)||(1321763-1321897)
chr3 (14-149)||(38210655-38210790)
chr3 (14-148)||(10191152-10191285)
chr3 (14-148)||(10958163-10958296)
chr3 (18-148)||(25389194-25389326)
chr3 (22-148)||(53915338-53915467)
chr3 (22-148)||(53917506-53917635)
chr3 (14-111)||(26720831-26720928)
chr3 (14-130)||(38890324-38890441)
chr3 (14-141)||(53893900-53894029)
chr3 (14-148)||(3859794-3859930)
chr3 (22-148)||(36012114-36012243)
chr3 (22-148)||(9604447-9604575)
chr3 (22-149)||(4308121-4308251)
chr3 (22-148)||(18096740-18096870)
chr3 (14-148)||(51726847-51726980)
chr3 (28-148)||(1313698-1313822)
chr3 (31-148)||(43423308-43423428)
chr3 (14-149)||(4103735-4103869)
chr3 (31-154)||(27635491-27635618)
chr3 (22-139)||(43228578-43228696)
chr3 (29-150)||(5899969-5900093)
chr3 (22-148)||(18099010-18099140)
chr3 (29-148)||(5886496-5886618)
chr3 (31-148)||(23633745-23633862)
chr3 (47-148)||(31151653-31151754)
chr3 (34-148)||(43226381-43226495)
chr3 (14-148)||(7606443-7606578)
chr3 (30-153)||(11170670-11170793)
chr3 (22-148)||(32219372-32219503)
chr3 (18-148)||(42992669-42992799)
chr3 (28-148)||(28761287-28761407)
chr3 (31-148)||(43421260-43421380)
chr3 (31-148)||(45883237-45883357)
chr3 (31-148)||(3314979-3315100)
chr3 (29-148)||(54691417-54691538)
chr3 (29-142)||(27101028-27101144)
chr3 (28-148)||(12267819-12267942)
chr3 (28-148)||(15781170-15781293)
chr3 (33-148)||(24980007-24980126)
chr3 (28-145)||(880087-880208)
chr3 (31-148)||(28181298-28181417)
chr3 (31-148)||(32263881-32264001)
chr3 (31-141)||(880302-880416)
chr3 (32-142)||(18162960-18163074)
chr3 (28-148)||(17795549-17795669)
chr3 (28-148)||(19103989-19104109)
chr3 (31-148)||(3307054-3307176)
chr3 (75-148)||(28101848-28101922)
chr3 (30-146)||(47701522-47701638)
chr3 (31-114)||(51943667-51943752)
chr3 (31-131)||(561640-561739)
chr3 (28-148)||(1626525-1626649)
chr3 (31-150)||(6484652-6484775)
chr3 (28-142)||(5926615-5926731)
chr3 (18-71)||(42992553-42992606)
chr3 (33-149)||(53468294-53468414)
chr3 (28-148)||(25635671-25635788)
chr3 (79-142)||(36957651-36957713)
chr3 (76-149)||(51674607-51674682)
chr3 (28-148)||(47148745-47148861)
chr3 (31-148)||(25687998-25688121)
chr3 (64-148)||(53591512-53591597)
chr3 (31-142)||(4666808-4666922)
chr3 (31-148)||(36871149-36871265)
chr3 (88-148)||(35917876-35917937)
chr3 (29-148)||(25634178-25634294)
chr3 (14-99)||(35919018-35919105)
chr3 (28-114)||(48361546-48361634)
chr3 (64-148)||(6232128-6232208)
chr3 (110-148)||(43228695-43228733)
chr3 (96-148)||(22625829-22625882)
chr3 (68-148)||(24181669-24181749)
chr3 (77-148)||(53597575-53597644)
chr3 (96-148)||(27421004-27421055)
[»] chr1 (92 HSPs)
chr1 (149-466)||(37030627-37030944)
chr1 (152-463)||(32592383-32592694)
chr1 (14-148)||(9459277-9459411)
chr1 (14-148)||(9463104-9463238)
chr1 (14-148)||(16226472-16226607)
chr1 (14-148)||(16231867-16232002)
chr1 (14-148)||(28842798-28842931)
chr1 (14-155)||(13358877-13359018)
chr1 (14-148)||(39932378-39932514)
chr1 (14-148)||(51750343-51750476)
chr1 (14-148)||(13762140-13762275)
chr1 (14-148)||(46431548-46431682)
chr1 (14-119)||(28840983-28841088)
chr1 (14-149)||(13447116-13447250)
chr1 (14-148)||(15294678-15294811)
chr1 (14-148)||(10399669-10399805)
chr1 (14-150)||(31735363-31735498)
chr1 (16-148)||(23786145-23786278)
chr1 (22-150)||(23816195-23816325)
chr1 (14-148)||(47177666-47177801)
chr1 (22-149)||(47906576-47906705)
chr1 (220-466)||(51824717-51824954)
chr1 (14-150)||(47180017-47180154)
chr1 (14-148)||(20291760-20291894)
chr1 (14-148)||(51757834-51757973)
chr1 (14-151)||(24325967-24326104)
chr1 (14-149)||(20302745-20302880)
chr1 (31-149)||(2949078-2949199)
chr1 (22-148)||(6995540-6995669)
chr1 (28-142)||(25251127-25251244)
chr1 (28-148)||(50078635-50078759)
chr1 (31-148)||(31490226-31490345)
chr1 (22-148)||(2617829-2617955)
chr1 (33-148)||(15916706-15916821)
chr1 (39-148)||(16429277-16429387)
chr1 (31-142)||(9240940-9241054)
chr1 (22-148)||(39462826-39462956)
chr1 (28-149)||(4131220-4131345)
chr1 (14-148)||(51752667-51752805)
chr1 (28-148)||(40134255-40134378)
chr1 (22-148)||(50307389-50307519)
chr1 (152-274)||(31527272-31527394)
chr1 (345-463)||(31527430-31527548)
chr1 (14-131)||(2510202-2510319)
chr1 (31-148)||(18839902-18840022)
chr1 (28-148)||(50248417-50248540)
chr1 (33-148)||(17319203-17319321)
chr1 (22-148)||(28206912-28207042)
chr1 (31-149)||(3579430-3579550)
chr1 (30-148)||(8348905-8349021)
chr1 (31-149)||(25248397-25248518)
chr1 (28-148)||(14097815-14097939)
chr1 (28-148)||(14183455-14183574)
chr1 (31-148)||(31424862-31424982)
chr1 (31-143)||(11457327-11457442)
chr1 (33-140)||(16432705-16432813)
chr1 (22-133)||(27336799-27336914)
chr1 (28-142)||(6114959-6115074)
chr1 (28-142)||(18800429-18800543)
chr1 (29-148)||(47451943-47452065)
chr1 (31-148)||(17185979-17186096)
chr1 (31-148)||(13215398-13215518)
chr1 (31-124)||(17324388-17324484)
chr1 (22-133)||(27338990-27339105)
chr1 (32-148)||(30780361-30780482)
chr1 (66-152)||(31422702-31422789)
chr1 (31-148)||(18307423-18307543)
chr1 (31-148)||(41647234-41647355)
chr1 (31-108)||(16428966-16429043)
chr1 (48-148)||(30790250-30790350)
chr1 (28-148)||(12302349-12302475)
chr1 (28-148)||(13125310-13125428)
chr1 (28-148)||(28998094-28998220)
chr1 (28-148)||(29003810-29003936)
chr1 (30-148)||(38925328-38925451)
chr1 (29-132)||(15823861-15823968)
chr1 (22-131)||(25860270-25860378)
chr1 (31-138)||(8347136-8347241)
chr1 (149-215)||(51824287-51824353)
chr1 (68-142)||(17324484-17324560)
chr1 (53-142)||(26519295-26519381)
chr1 (75-142)||(25128233-25128301)
chr1 (28-106)||(50076563-50076643)
chr1 (31-133)||(155998-156097)
chr1 (30-113)||(13127576-13127656)
chr1 (48-111)||(15669281-15669344)
chr1 (27-113)||(26332400-26332483)
chr1 (28-132)||(28279578-28279680)
chr1 (96-133)||(2232872-2232909)
chr1 (96-133)||(9526743-9526779)
chr1 (46-91)||(13433482-13433527)
chr1 (96-132)||(13785123-13785159)
[»] chr8 (49 HSPs)
chr8 (152-466)||(26756496-26756812)
chr8 (14-148)||(28283062-28283196)
chr8 (13-148)||(24873039-24873176)
chr8 (16-132)||(43082335-43082451)
chr8 (14-148)||(3883436-3883570)
chr8 (16-132)||(43079964-43080080)
chr8 (14-153)||(15809578-15809716)
chr8 (14-148)||(3874353-3874487)
chr8 (14-148)||(43530475-43530609)
chr8 (14-148)||(18811067-18811202)
chr8 (14-148)||(4424378-4424512)
chr8 (14-148)||(18813241-18813376)
chr8 (14-148)||(27827345-27827479)
chr8 (14-148)||(22684491-22684628)
chr8 (31-141)||(13858341-13858452)
chr8 (22-149)||(15073073-15073203)
chr8 (14-148)||(27829656-27829790)
chr8 (14-148)||(32339669-32339803)
chr8 (14-129)||(44721203-44721318)
chr8 (14-149)||(609095-609231)
chr8 (28-149)||(14808128-14808253)
chr8 (22-148)||(15068343-15068472)
chr8 (28-152)||(27106743-27106867)
chr8 (22-149)||(28251409-28251539)
chr8 (28-148)||(15956323-15956443)
chr8 (28-131)||(31162579-31162683)
chr8 (30-148)||(35872301-35872422)
chr8 (22-148)||(41383025-41383154)
chr8 (28-149)||(15185563-15185684)
chr8 (34-148)||(33541255-33541372)
chr8 (61-148)||(14477652-14477740)
chr8 (32-148)||(25952891-25953010)
chr8 (28-148)||(2467979-2468099)
chr8 (31-143)||(30480352-30480468)
chr8 (31-151)||(21482679-21482801)
chr8 (28-131)||(36865906-36866012)
chr8 (28-148)||(37214109-37214232)
chr8 (31-148)||(14419035-14419155)
chr8 (47-149)||(3005485-3005586)
chr8 (22-148)||(41385107-41385233)
chr8 (28-148)||(27911446-27911567)
chr8 (28-148)||(27957865-27957986)
chr8 (28-148)||(21480868-21480990)
chr8 (85-151)||(183246-183313)
chr8 (30-132)||(5372042-5372148)
chr8 (71-129)||(1225567-1225626)
chr8 (28-83)||(181844-181901)
chr8 (30-92)||(3896188-3896248)
chr8 (96-132)||(30423489-30423524)
[»] chr5 (73 HSPs)
chr5 (14-148)||(39798334-39798468)
chr5 (16-148)||(38959972-38960104)
chr5 (14-148)||(18469313-18469448)
chr5 (14-148)||(18466988-18467123)
chr5 (14-142)||(27912840-27912969)
chr5 (14-153)||(38882392-38882530)
chr5 (14-149)||(2175205-2175342)
chr5 (14-150)||(10587119-10587254)
chr5 (16-129)||(31543040-31543153)
chr5 (14-148)||(25804328-25804463)
chr5 (14-148)||(27910737-27910872)
chr5 (14-148)||(34476894-34477028)
chr5 (14-148)||(15552550-15552685)
chr5 (14-148)||(4410326-4410458)
chr5 (14-148)||(21684294-21684427)
chr5 (14-157)||(10528928-10529073)
chr5 (19-149)||(3372976-3373107)
chr5 (14-129)||(25921333-25921448)
chr5 (14-148)||(31179213-31179348)
chr5 (14-148)||(34479259-34479393)
chr5 (16-129)||(31545389-31545502)
chr5 (14-148)||(4236932-4237065)
chr5 (16-148)||(10750005-10750137)
chr5 (16-148)||(10757481-10757613)
chr5 (28-148)||(41585580-41585703)
chr5 (22-148)||(18511056-18511185)
chr5 (28-142)||(21289070-21289187)
chr5 (22-148)||(36402170-36402300)
chr5 (31-148)||(2724207-2724328)
chr5 (31-147)||(6756806-6756926)
chr5 (31-141)||(40221843-40221956)
chr5 (22-134)||(16776466-16776580)
chr5 (31-142)||(17818340-17818455)
chr5 (31-148)||(26098129-26098251)
chr5 (16-148)||(15354414-15354548)
chr5 (16-148)||(15356690-15356824)
chr5 (28-148)||(36208884-36209007)
chr5 (33-148)||(23665368-23665484)
chr5 (33-148)||(23741697-23741813)
chr5 (33-148)||(23793103-23793219)
chr5 (31-148)||(34530559-34530679)
chr5 (33-149)||(21948348-21948469)
chr5 (22-148)||(39854791-39854921)
chr5 (28-147)||(12555757-12555881)
chr5 (31-148)||(31465833-31465954)
chr5 (32-148)||(20054151-20054266)
chr5 (28-147)||(6661038-6661156)
chr5 (22-140)||(2818186-2818307)
chr5 (22-148)||(6745375-6745507)
chr5 (22-148)||(6747611-6747743)
chr5 (22-110)||(18509201-18509291)
chr5 (32-149)||(1189453-1189571)
chr5 (31-148)||(37705626-37705747)
chr5 (31-148)||(658204-658323)
chr5 (31-148)||(18596959-18597079)
chr5 (28-148)||(24127167-24127291)
chr5 (34-140)||(10474176-10474285)
chr5 (28-123)||(20045297-20045395)
chr5 (31-111)||(26098045-26098127)
chr5 (29-148)||(696187-696310)
chr5 (28-148)||(20505687-20505813)
chr5 (22-111)||(17073192-17073283)
chr5 (31-148)||(25904417-25904536)
chr5 (31-140)||(20043303-20043416)
chr5 (31-142)||(2954728-2954843)
chr5 (30-148)||(31472458-31472577)
chr5 (31-148)||(16092045-16092164)
chr5 (31-131)||(15445135-15445234)
chr5 (28-149)||(9020531-9020650)
chr5 (16-148)||(23667624-23667760)
chr5 (31-148)||(39397857-39397970)
chr5 (96-149)||(1171089-1171143)
chr5 (31-112)||(42771089-42771167)
[»] chr7 (70 HSPs)
chr7 (16-149)||(9027033-9027166)
chr7 (14-148)||(7351491-7351626)
chr7 (14-148)||(11759441-11759575)
chr7 (14-148)||(38394300-38394434)
chr7 (14-148)||(7471821-7471955)
chr7 (14-148)||(20297676-20297810)
chr7 (14-147)||(28487867-28488000)
chr7 (14-148)||(44878-45012)
chr7 (22-148)||(20626355-20626481)
chr7 (22-148)||(20630246-20630372)
chr7 (22-148)||(20642665-20642791)
chr7 (16-148)||(40836583-40836716)
chr7 (16-148)||(1606695-1606827)
chr7 (17-148)||(7349117-7349248)
chr7 (14-149)||(48457967-48458101)
chr7 (14-148)||(20299774-20299908)
chr7 (14-148)||(25542842-25542976)
chr7 (14-149)||(1850295-1850430)
chr7 (14-148)||(7469864-7469997)
chr7 (14-148)||(28485879-28486013)
chr7 (14-142)||(3036038-3036166)
chr7 (14-137)||(35943-36066)
chr7 (14-148)||(1049129-1049270)
chr7 (14-148)||(18345855-18345989)
chr7 (14-150)||(40946642-40946779)
chr7 (14-148)||(43253358-43253492)
chr7 (14-148)||(1046757-1046899)
chr7 (16-148)||(2935584-2935716)
chr7 (14-146)||(38396948-38397084)
chr7 (14-148)||(7094301-7094435)
chr7 (22-148)||(13099317-13099446)
chr7 (28-149)||(26295765-26295886)
chr7 (14-148)||(3878891-3879027)
chr7 (28-148)||(44724898-44725022)
chr7 (31-148)||(42330846-42330966)
chr7 (14-148)||(7092054-7092188)
chr7 (28-150)||(31434890-31435016)
chr7 (33-148)||(4295781-4295899)
chr7 (31-148)||(24465857-24465975)
chr7 (28-148)||(24748914-24749035)
chr7 (22-148)||(27306076-27306205)
chr7 (30-148)||(42223479-42223600)
chr7 (31-148)||(21678386-21678506)
chr7 (29-148)||(26804833-26804955)
chr7 (31-148)||(27832488-27832606)
chr7 (14-103)||(31155811-31155903)
chr7 (33-148)||(40550161-40550277)
chr7 (28-148)||(21680349-21680472)
chr7 (31-148)||(7188861-7188979)
chr7 (16-148)||(22137393-22137527)
chr7 (31-126)||(22251452-22251550)
chr7 (16-148)||(40552420-40552554)
chr7 (31-148)||(443922-444044)
chr7 (28-148)||(22394042-22394161)
chr7 (29-148)||(11355581-11355705)
chr7 (28-133)||(37411982-37412090)
chr7 (31-139)||(9679383-9679495)
chr7 (33-132)||(6349122-6349220)
chr7 (28-123)||(39145856-39145954)
chr7 (31-148)||(21591989-21592108)
chr7 (99-148)||(31153691-31153740)
chr7 (80-148)||(1502816-1502883)
chr7 (31-114)||(21990474-21990560)
chr7 (33-140)||(9681146-9681257)
chr7 (33-115)||(22108401-22108484)
chr7 (77-148)||(25276497-25276566)
chr7 (75-148)||(20136991-20137066)
chr7 (28-113)||(20091041-20091125)
chr7 (77-149)||(24813347-24813419)
chr7 (32-90)||(16296932-16296989)
[»] scaffold0127 (1 HSPs)
scaffold0127 (18-148)||(12715-12845)
[»] chr6 (56 HSPs)
chr6 (14-148)||(2628727-2628861)
chr6 (14-148)||(12195354-12195489)
chr6 (14-148)||(26932403-26932538)
chr6 (16-148)||(5273055-5273189)
chr6 (14-153)||(14507013-14507151)
chr6 (14-148)||(30034447-30034578)
chr6 (14-148)||(28241163-28241296)
chr6 (16-148)||(26065961-26066094)
chr6 (16-148)||(26068235-26068368)
chr6 (16-148)||(29754549-29754682)
chr6 (14-148)||(1230090-1230224)
chr6 (14-132)||(4816087-4816206)
chr6 (22-149)||(9020269-9020399)
chr6 (14-149)||(30967540-30967674)
chr6 (22-148)||(11982872-11983000)
chr6 (16-148)||(33309197-33309329)
chr6 (16-148)||(33311466-33311598)
chr6 (14-148)||(14458607-14458742)
chr6 (14-148)||(19704403-19704542)
chr6 (64-148)||(18322482-18322566)
chr6 (14-132)||(20915213-20915332)
chr6 (33-148)||(15367380-15367498)
chr6 (31-144)||(30728673-30728789)
chr6 (29-141)||(15346691-15346806)
chr6 (28-148)||(24338295-24338418)
chr6 (16-148)||(26065320-26065457)
chr6 (16-148)||(26085289-26085426)
chr6 (28-148)||(3629711-3629835)
chr6 (75-148)||(8717195-8717268)
chr6 (33-148)||(17012387-17012502)
chr6 (31-148)||(3631784-3631904)
chr6 (28-148)||(3027703-3027822)
chr6 (31-148)||(3394716-3394837)
chr6 (77-149)||(13057587-13057660)
chr6 (22-142)||(14466665-14466785)
chr6 (31-148)||(25480227-25480346)
chr6 (22-148)||(3233567-3233697)
chr6 (28-142)||(22490959-22491073)
chr6 (72-148)||(15540990-15541067)
chr6 (33-148)||(32280348-32280463)
chr6 (31-148)||(1069563-1069683)
chr6 (90-149)||(13040173-13040233)
chr6 (31-138)||(26945493-26945600)
chr6 (29-150)||(15530001-15530129)
chr6 (33-131)||(19696791-19696887)
chr6 (29-131)||(6610378-6610478)
chr6 (92-148)||(10584355-10584413)
chr6 (52-147)||(3918747-3918841)
chr6 (77-148)||(16455280-16455350)
chr6 (77-148)||(22611069-22611138)
chr6 (96-150)||(28037574-28037630)
chr6 (70-113)||(25477614-25477657)
chr6 (96-148)||(17694701-17694754)
chr6 (96-148)||(22351704-22351756)
chr6 (77-148)||(25465444-25465513)
chr6 (77-132)||(28078063-28078118)
[»] chr4 (93 HSPs)
chr4 (14-148)||(22782577-22782712)
chr4 (14-148)||(22780212-22780347)
chr4 (14-149)||(18709002-18709138)
chr4 (14-148)||(26085818-26085952)
chr4 (14-148)||(53405491-53405626)
chr4 (14-148)||(37089212-37089347)
chr4 (14-148)||(5635318-5635451)
chr4 (14-148)||(24348559-24348692)
chr4 (14-148)||(9173987-9174121)
chr4 (14-148)||(2484715-2484848)
chr4 (15-148)||(6765203-6765335)
chr4 (16-133)||(22044247-22044364)
chr4 (16-148)||(16931631-16931763)
chr4 (14-148)||(8631260-8631394)
chr4 (14-148)||(9176315-9176449)
chr4 (29-148)||(14787274-14787396)
chr4 (29-148)||(14789273-14789395)
chr4 (14-148)||(31849440-31849574)
chr4 (14-148)||(47868759-47868894)
chr4 (14-133)||(51015603-51015722)
chr4 (14-148)||(9148593-9148727)
chr4 (14-148)||(14633676-14633810)
chr4 (16-148)||(22046526-22046659)
chr4 (28-148)||(38928024-38928147)
chr4 (16-148)||(44599680-44599811)
chr4 (14-148)||(11437720-11437855)
chr4 (14-139)||(11435312-11435438)
chr4 (14-149)||(5198761-5198896)
chr4 (14-148)||(11006094-11006229)
chr4 (14-148)||(11008408-11008543)
chr4 (14-148)||(7941681-7941814)
chr4 (22-148)||(22802577-22802706)
chr4 (22-156)||(24889157-24889294)
chr4 (31-148)||(36921338-36921458)
chr4 (16-148)||(38409564-38409696)
chr4 (14-132)||(18847510-18847628)
chr4 (31-148)||(16453676-16453796)
chr4 (28-148)||(49088921-49089044)
chr4 (14-129)||(22134476-22134593)
chr4 (22-148)||(22800705-22800834)
chr4 (30-148)||(47210637-47210755)
chr4 (16-148)||(16933988-16934117)
chr4 (28-148)||(2891657-2891780)
chr4 (28-148)||(3937126-3937244)
chr4 (14-129)||(22132248-22132366)
chr4 (21-148)||(17662092-17662220)
chr4 (31-145)||(36919432-36919549)
chr4 (31-148)||(56030828-56030945)
chr4 (31-148)||(37312924-37313044)
chr4 (30-148)||(24446502-24446623)
chr4 (33-148)||(18409192-18409309)
chr4 (22-148)||(40637435-40637566)
chr4 (33-148)||(40091259-40091378)
chr4 (31-149)||(33415333-33415455)
chr4 (32-148)||(4215672-4215792)
chr4 (28-147)||(6133202-6133326)
chr4 (28-142)||(27499413-27499530)
chr4 (64-148)||(16455629-16455714)
chr4 (31-148)||(5664605-5664722)
chr4 (31-148)||(47563127-47563248)
chr4 (31-148)||(5101284-5101404)
chr4 (31-141)||(41997858-41997968)
chr4 (31-148)||(12102450-12102566)
chr4 (33-142)||(18534689-18534797)
chr4 (33-148)||(3824447-3824569)
chr4 (28-146)||(12395692-12395813)
chr4 (28-146)||(12400654-12400775)
chr4 (31-148)||(19323061-19323177)
chr4 (31-148)||(36378659-36378777)
chr4 (29-142)||(48486687-48486803)
chr4 (22-148)||(52942329-52942460)
chr4 (31-132)||(38890090-38890191)
chr4 (28-148)||(8756103-8756221)
chr4 (28-113)||(18537360-18537444)
chr4 (31-148)||(47275092-47275212)
chr4 (53-141)||(15032401-15032488)
chr4 (72-148)||(19096293-19096370)
chr4 (22-92)||(24879351-24879423)
chr4 (29-148)||(619298-619416)
chr4 (29-141)||(30136915-30137026)
chr4 (31-148)||(10113236-10113351)
chr4 (29-149)||(28454051-28454168)
chr4 (31-141)||(36380716-36380827)
chr4 (72-148)||(38269995-38270071)
chr4 (33-140)||(13547524-13547635)
chr4 (28-148)||(16185686-16185804)
chr4 (31-132)||(52043427-52043528)
chr4 (90-148)||(18311215-18311275)
chr4 (22-92)||(24880813-24880887)
chr4 (96-149)||(16489628-16489682)
chr4 (96-148)||(4885149-4885202)
chr4 (68-148)||(9864115-9864196)
chr4 (30-111)||(40998907-40998986)
[»] chr2 (49 HSPs)
chr2 (14-146)||(45279844-45279976)
chr2 (14-145)||(27105077-27105209)
chr2 (33-148)||(19501843-19501958)
chr2 (14-132)||(13909902-13910020)
chr2 (35-148)||(19504178-19504291)
chr2 (14-142)||(23452084-23452212)
chr2 (14-148)||(24162063-24162198)
chr2 (14-148)||(36558721-36558856)
chr2 (14-148)||(45332020-45332155)
chr2 (16-150)||(35215431-35215565)
chr2 (16-148)||(36560981-36561114)
chr2 (16-132)||(35217826-35217942)
chr2 (28-148)||(19007927-19008051)
chr2 (27-148)||(17849403-17849528)
chr2 (31-148)||(28196925-28197045)
chr2 (28-148)||(22162869-22162992)
chr2 (14-120)||(42064778-42064884)
chr2 (22-150)||(7462787-7462919)
chr2 (22-148)||(21520534-21520664)
chr2 (53-151)||(22874423-22874522)
chr2 (31-148)||(14837558-14837679)
chr2 (31-148)||(28459038-28459157)
chr2 (28-148)||(3022459-3022582)
chr2 (28-151)||(11577954-11578077)
chr2 (22-149)||(43623422-43623553)
chr2 (31-148)||(22287181-22287301)
chr2 (28-148)||(42923351-42923475)
chr2 (40-148)||(11739421-11739532)
chr2 (64-148)||(42453807-42453890)
chr2 (33-148)||(20592368-20592484)
chr2 (31-142)||(6258668-6258782)
chr2 (31-142)||(38020370-38020484)
chr2 (31-148)||(45238842-45238964)
chr2 (31-148)||(22707595-22707716)
chr2 (31-149)||(31732630-31732746)
chr2 (28-148)||(6263993-6264116)
chr2 (28-127)||(15539396-15539497)
chr2 (33-114)||(5375225-5375308)
chr2 (28-149)||(17897098-17897216)
chr2 (31-142)||(34979440-34979554)
chr2 (29-148)||(37962791-37962910)
chr2 (28-148)||(38414028-38414150)
chr2 (31-102)||(22407346-22407419)
chr2 (31-148)||(23871106-23871229)
chr2 (75-116)||(17848775-17848816)
chr2 (14-56)||(42453043-42453085)
chr2 (27-132)||(13828192-13828296)
chr2 (96-148)||(17462714-17462767)
chr2 (77-148)||(20146459-20146529)
[»] scaffold0025 (1 HSPs)
scaffold0025 (14-148)||(69133-69267)
[»] scaffold0250 (1 HSPs)
scaffold0250 (14-142)||(3192-3319)
[»] scaffold0472 (1 HSPs)
scaffold0472 (16-148)||(6514-6646)
[»] scaffold1674 (1 HSPs)
scaffold1674 (14-142)||(1298-1426)
[»] scaffold0005 (3 HSPs)
scaffold0005 (29-148)||(50335-50457)
scaffold0005 (29-148)||(52334-52456)
scaffold0005 (14-148)||(183482-183616)
[»] scaffold0068 (1 HSPs)
scaffold0068 (14-148)||(29483-29616)
[»] scaffold0038 (1 HSPs)
scaffold0038 (14-148)||(41325-41458)
[»] scaffold0267 (1 HSPs)
scaffold0267 (14-148)||(337-473)
[»] scaffold0131 (2 HSPs)
scaffold0131 (31-148)||(14231-14349)
scaffold0131 (103-142)||(15393-15433)
[»] scaffold0370 (1 HSPs)
scaffold0370 (14-132)||(1309-1428)
[»] scaffold0011 (1 HSPs)
scaffold0011 (22-146)||(35909-36037)
[»] scaffold0031 (1 HSPs)
scaffold0031 (29-148)||(79508-79631)
[»] scaffold0891 (1 HSPs)
scaffold0891 (16-131)||(4535-4650)
[»] scaffold0140 (2 HSPs)
scaffold0140 (16-148)||(24705-24839)
scaffold0140 (16-148)||(22430-22564)
[»] scaffold0045 (1 HSPs)
scaffold0045 (28-146)||(85549-85671)
[»] scaffold0004 (1 HSPs)
scaffold0004 (22-148)||(80175-80305)
[»] scaffold0468 (1 HSPs)
scaffold0468 (30-148)||(1493-1609)
[»] scaffold0154 (1 HSPs)
scaffold0154 (22-147)||(11315-11445)
[»] scaffold0057 (1 HSPs)
scaffold0057 (28-149)||(16500-16619)
[»] scaffold1899 (1 HSPs)
scaffold1899 (87-139)||(1-53)
[»] scaffold0339 (1 HSPs)
scaffold0339 (31-148)||(4317-4437)
[»] scaffold0133 (1 HSPs)
scaffold0133 (38-142)||(5136-5241)
[»] scaffold0256 (1 HSPs)
scaffold0256 (96-148)||(16605-16656)


Alignment Details
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 149 - 466
Target Start/End: Original strand, 49202958 - 49203275
Alignment:
Q  149 taaactaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcacct 248  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49202958 taaactaaccttagtttcatattgaacactagctttgctaaggaactcggctttaagcttctcagtagtagtcaaagcattcatcctttcaacttcacct 49203057  T
Q  249 tgtaactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagccgccttcttcttagccaactcagaat 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49203058 tgtaactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagctgccttcttcttagccaactcagaat 49203157  T
Q  349 tagcctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctctccggtcctctgcagtgc 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49203158 tagcctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctatccggtcctctgcagtgc 49203257  T
Q  449 aataacttttgtctctgc 466  Q
    ||||||||||||||||||    
T  49203258 aataacttttgtctctgc 49203275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 149 - 466
Target Start/End: Original strand, 49191852 - 49192169
Alignment:
Q  149 taaactaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcacct 248  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  49191852 taaactaaccttggtttcatattgaacactagctttgctaaggaactcagctttaagcttctcagttgtagtcaaagcattcatcctctcaacttcacct 49191951  T
Q  249 tgtaactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagccgccttcttcttagccaactcagaat 348  Q
    ||||||||||||||||||||||| ||||| ||    ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  49191952 tgtaactcagcatcccttagagcgacggctttggcagcctcaacttcggccacttgagccgccttagtccaagccgctttcttcttagccaattcagaat 49192051  T
Q  349 tagcctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctctccggtcctctgcagtgc 448  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||  ||    
T  49192052 tagcctcagccacttcagcttctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcgccctctccagccctctgcatcgc 49192151  T
Q  449 aataacttttgtctctgc 466  Q
    |||||  |||||||||||    
T  49192152 aataatctttgtctctgc 49192169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 149 - 466
Target Start/End: Original strand, 49188116 - 49188433
Alignment:
Q  149 taaactaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcacct 248  Q
    |||||||||||| |||||||||||||||||||||||| |||| || || |||||||||||||||||  ||||||| ||||||||||| || |||||||||    
T  49188116 taaactaaccttggtttcatattgaacactagctttgctaagtaaatcagctttaagcttctcagttgtagtcaatgcattcatcctctcgacttcacct 49188215  T
Q  249 tgtaactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagccgccttcttcttagccaactcagaat 348  Q
    || |||||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  49188216 tgcaactcagcttcccttagagcaacagccttcttcgcctcgacttcagccacctgagccgccttggtccaagccgctttcttcttagccaactcagaat 49188315  T
Q  349 tagcctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctctccggtcctctgcagtgc 448  Q
    |||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |  |||||||  ||    
T  49188316 tagcttgagccacttcagcctctctttgattctcaaaaaccttcacttcagtcctcactttaattccctccttctcaccctctccagctctctgcatcgc 49188415  T
Q  449 aataacttttgtctctgc 466  Q
    |||||| || ||||||||    
T  49188416 aataaccttcgtctctgc 49188433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 152 - 426
Target Start/End: Original strand, 49212972 - 49213246
Alignment:
Q  152 actaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcaccttgt 251  Q
    |||||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||  ||||||||||||||||| | ||||| ||||||||     
T  49212972 actaaccttagtttcatattgaacactagctttgctaagtaaatcagctttaagcttctcagttgtagtcaaagcattcatcttctcaacctcaccttgc 49213071  T
Q  252 aactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagccgccttcttcttagccaactcagaattag 351  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||||||| |||||||    
T  49213072 aactcagcttcccttagagccacagccttcttcgcctcaacttcagccacctgagccgccttggtccaagcagccttctttttggccaactccgaattag 49213171  T
Q  352 cctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcac 426  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||||| ||| ||||    
T  49213172 cctcagccacttcagcctctctctgattctcaaatactttcacttcagttctcactttaattccctgcttctcac 49213246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 152 - 466
Target Start/End: Original strand, 49208132 - 49208446
Alignment:
Q  152 actaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcaccttgt 251  Q
    |||||||||||| ||||||| ||||||||||||| ||||||| || |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||     
T  49208132 actaaccttagtgtcatattcaacactagctttgctaaggaaatcagctttaagcttctcagtagtagtcaaagcattcatcctctcaacctcaccttgc 49208231  T
Q  252 aactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagccgccttcttcttagccaactcagaattag 351  Q
    |||||||| ||||||||||||||||| ||    |||||||  |||||||| ||||||||| | |||||||| || ||||||||||||||||| |||||||    
T  49208232 aactcagcttcccttagagccacggctttagcagcctcaagctcagccacttgagccgccattgtccaagcagctttcttcttagccaactcggaattag 49208331  T
Q  352 cctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctctccggtcctctgcagtgcaat 451  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||  || ||||| ||||| | ||||||||  |||||    
T  49208332 cctcagccacttcagcctctctttgattctcaaaaactttcacttcagtcctcactttaattccctgtttctcaccttctccagccctctgcatcgcaat 49208431  T
Q  452 aacttttgtctctgc 466  Q
    ||| || ||||||||    
T  49208432 aaccttcgtctctgc 49208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 6065768 - 6065633
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  6065768 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttaattatcccttgctccacacatcaag 6065669  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||||||    
T  6065668 ttgttattggtgtgatttttcatcgaattcgcaaca 6065633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 747042 - 747177
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  747042 tgtgttcttctcgcagttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccacacatcaag 747141  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  747142 ttgttattggtgtgatttttcatcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 456192 - 456325
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  456192 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgttttggttgcttgattatcccttgctccacacatcaagt 456291  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||||||||||| |||||    
T  456292 tgttattggtgtga-ttttcatcgaattcacaaca 456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 458569 - 458702
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  458569 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgttttggttgcttgattatcccttgctccacacatcaagt 458668  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||||||||||| |||||    
T  458669 tgttattggtgtga-ttttcatcgaattcacaaca 458702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 10621502 - 10621366
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg--ttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  10621502 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttggtttttggttgcttaattatcccttgctccacacatcaa 10621403  T
Q  112 gttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||| |||||    
T  10621402 gttgttattggtgtgatttttcatcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 41849351 - 41849471
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41849351 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 41849450  T
Q  128 tttttcatcgaattcgcaacat 149  Q
     |||||||||||||||||||||    
T  41849451 -ttttcatcgaattcgcaacat 41849471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 6063418 - 6063283
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||    
T  6063418 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgttccacacatcaag 6063319  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||| ||||||||||||||||||||||||||||    
T  6063318 ttgttatcggtgtgatttttcatcgaattcgcaaca 6063283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 28413003 - 28412870
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  28413003 tgtgttcttctcgccgttgttttctacttttgacttgtatttataactttcatacactt-gttttggttacttgattatcccttgctccacacatcaagt 28412905  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||| ||||||||||||||| |||||    
T  28412904 tgttattggtgtgttttttcatcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 5522600 - 5522465
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  5522600 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcttacactttgattttggttgcttgactatcccttgctccacacatcaag 5522501  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  5522500 ttgttattggtgtga-ttttcaacgaattcgcaacat 5522465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 42990587 - 42990717
Alignment:
Q  18 ttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  42990587 ttcttctcgccgttgttttctacttttggcttgtatttataacttacatacactttgttttggttgcctgattatcccttgctccacacatcaagtttgt 42990686  T
Q  117 tattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||| ||||||||||||||||||||    
T  42990687 tattggtgtga-ttttcatcgaattcgcaaca 42990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 22114278 - 22114142
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22114278 tgtgttcttctcgccgttttttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccacacatcaa 22114179  T
Q  112 gttgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  22114178 gttgctattggtgtga-ttttcatcgaattcgcaacat 22114142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 10956000 - 10955866
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10956000 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 10955901  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    |||||||||||||| |||||||||||||| ||||||    
T  10955900 tgttattggtgtga-ttttcatcgaattcacaacat 10955866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 25533709 - 25533842
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  25533709 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgat-atctcttgctccacacatcaagt 25533807  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||    
T  25533808 tgttattggtgtgatttttcatcgaattcgcaaca 25533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 5191935 - 5192066
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5191935 tgtgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 5192034  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaa 146  Q
    |||||||||||||| ||||||||||||||||||    
T  5192035 tgttattggtgtga-ttttcatcgaattcgcaa 5192066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 10084362 - 10084229
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10084362 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtcccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 10084263  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||| ||||||||||    
T  10084262 tgttattggtgtga-ttttcatcggattcgcaaca 10084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 11168387 - 11168519
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11168387 tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagtt 11168486  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||| ||||||||||||||||||||    
T  11168487 gttattggtgtga-ttttcatcgaattcgcaaca 11168519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 50494285 - 50494417
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  50494285 tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgttttggttgcttaattatctcttgctccacacatcaagttg 50494384  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||| |||||    
T  50494385 ttattggtgtgatttttcatcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 1321763 - 1321897
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||| |||||||||||||||||||||||||||     
T  1321763 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcctgattatcccttgctccacacatcaagt 1321862  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  1321863 ttgttattggtgtga-ttttcatcgaattcgcaaca 1321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 38210655 - 38210790
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||| |||||||||| ||| ||||| |||||||||||||||||||||||    
T  38210655 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgttttgtttgtttgataatcccttgctccacacatcaagt 38210754  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||||||||||||||||| ||||||    
T  38210755 tgttattggtgtgatttttcatcgaattcacaacat 38210790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 10191285 - 10191152
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10191285 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtcccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 10191186  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||  ||||||||||    
T  10191185 tgttattggtgtga-ttttcatcagattcgcaaca 10191152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 10958296 - 10958163
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    ||  ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10958296 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttctatacactttgttttggttgcttgattatctcttgctccacacatcaagt 10958197  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||||||||||| |||||    
T  10958196 tgttattggtgtga-ttttcatcgaattcacaaca 10958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 25389194 - 25389326
Alignment:
Q  18 ttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgt 116  Q
    ||||||||||||||||||||||||||| ||||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25389194 ttcttctcgccgttgttttctactttttggcttgtatttaattattccatacactttgttttggttgcttgattatcccttgctccacacatcaagttgt 25389293  T
Q  117 tattggtgtga-tttttcatcgaattcgcaaca 148  Q
    ||||||| ||| ||||||||||||||| |||||    
T  25389294 tattggtatgattttttcatcgaattcacaaca 25389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 53915467 - 53915338
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||    
T  53915467 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttggttttggttgcttgactatcccttgctccatacatcaagtttgtta 53915368  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||    
T  53915367 ttggtgtgatttttcatcgaattcgcaaca 53915338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 53917635 - 53917506
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  53917635 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgtta 53917536  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    || ||||||||||||||||| |||||||||    
T  53917535 ttagtgtgatttttcatcgatttcgcaaca 53917506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 26720831 - 26720928
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26720831 tgtgttcttctcgtcgttcttttctacttttggcttgtatttataacttccatacactttgttttggttgcttgattatcccttgctccacacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 38890324 - 38890441
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  38890324 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag 38890423  T
Q  113 ttgttattggtgtgattt 130  Q
    ||||||||||||||||||    
T  38890424 ttgttattggtgtgattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 53894029 - 53893900
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggctt-gtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53894029 tgtgttcttctcgccgttgtttttctacttttggctttgtatttaattattccatacactttgttttggttgcttgattatcccttgctccacacatcaa 53893930  T
Q  112 gttgttattggtgtgatttttcatcgaatt 141  Q
    ||||||||||||||||||||  ||||||||    
T  53893929 gttgttattggtgtgattttcgatcgaatt 53893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 3859794 - 3859930
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||| | ||||||||  ||||||||||||    
T  3859794 tgtgttcttctcgccgttgttttctacttttggcttgtattt-taattgtttcatacactttgttttggttgcttaactatcccttattccacacatcaa 3859892  T
Q  112 gttgttattggtgtgatttttc-atcgaattcgcaaca 148  Q
    |||||||||||||||| ||||| ||||||||| |||||    
T  3859893 gttgttattggtgtgacttttcgatcgaattcacaaca 3859930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 36012114 - 36012243
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||||||||||||||| |||||| ||||||| | |  |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  36012114 tctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttgttttggttgtttgattatcccttgctccatacatcaagtttgtta 36012213  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||    
T  36012214 ttggtgtgatttttcatcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 9604575 - 9604447
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| ||||||||||| ||||||| |||  |||||| |  ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  9604575 tctcgctgttgttttctatttttggcctgtgattataattgtttcatacactttggtttggttacttgattattccttgctccacacatcaagttgttat 9604476  T
Q  120 tggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||    
T  9604475 tggtgtgatttttcatcgaattcgcaaca 9604447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 4308251 - 4308121
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| |||||||||||||||||||||||  |||||| | |  |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  4308251 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttggttgttggattattccttgctccacacatcaagttgttat 4308152  T
Q  120 tggtgtgat-ttttcatcgaattcgcaacat 149  Q
    ||||||||| |||||||||||||||||||||    
T  4308151 tggtgtgatattttcatcgaattcgcaacat 4308121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 18096870 - 18096740
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  18096870 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 18096771  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||| ||||||||||||||||||||||    
T  18096770 attggtgtaatttttcatcgaattcgcaaca 18096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 51726980 - 51726847
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||||| |||||||  ||||| ||||||||||||    
T  51726980 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattat-tcttgccccacacatcaag 51726882  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  51726881 ttgttattggtgtga-ttttcatcgaattcgcaaca 51726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 1313698 - 1313822
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||| ||||| ||||||| | |  ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1313698 cgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtg 1313797  T
Q  125 tga-tttttcatcgaattcgcaaca 148  Q
    ||| |||||||||||||||||||||    
T  1313798 tgagtttttcatcgaattcgcaaca 1313822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 43423428 - 43423308
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaa-gttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| |    
T  43423428 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaactttgttattggtgtaa 43423329  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||    
T  43423328 tttttcatcgaattcgcaaca 43423308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 4103869 - 4103735
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||| |||||||||| ||| ||||| |||| ||| ||||||||||| |||||||     
T  4103869 tgtgttcttctcgccgttgttttttacttttgacatgtatttataacttccatacactttttttcggttgtttgactat-ccttgctccacgcatcaagt 4103771  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4103770 ttgttattggtgtga-ttttcatcgaattcgcaacat 4103735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 27635618 - 27635491
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  27635618 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtga 27635519  T
Q  128 tttt-tcatcgaattcgcaacataaact 154  Q
    |||| |||||||||| |||||| |||||    
T  27635518 ttttctcatcgaatttgcaacacaaact 27635491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 43228578 - 43228696
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| ||||||||||| ||||||||||||||| ||| | |  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43228578 tctcgctgttgttttctaattttggcttgtattt-taattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagttgttat 43228676  T
Q  120 tggtgtgatttttcatcgaa 139  Q
    ||||||||||| ||||||||    
T  43228677 tggtgtgatttctcatcgaa 43228696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 5899969 - 5900093
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||||||||||  |||||||| |  |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5899969 gttgttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatcaagttgttattggtgtg 5900067  T
Q  127 atttt--tcatcgaattcgcaacata 150  Q
    |||||  || ||||||||||||||||    
T  5900068 atttttctcgtcgaattcgcaacata 5900093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 18099140 - 18099010
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| |||| || | |  ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  18099140 tctcgctgttgttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgctccacacatcaagtttgtt 18099041  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||| |||||    
T  18099040 attggtgtgatttttcatcgaattcccaaca 18099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 5886496 - 5886618
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||||||||||  |||||||| |  |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5886496 gttgttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatcaagttgttattggtgtg 5886594  T
Q  127 atttt--tcatcgaattcgcaaca 148  Q
    |||||  || ||||||||||||||    
T  5886595 atttttctcgtcgaattcgcaaca 5886618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 23633745 - 23633862
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattt 130  Q
    |||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||| || |||||| |||||||| |||  |||||||||||||||    
T  23633745 tgttttctacttgtggcttgtgtttataaattccatacactttgttttggttgcttgattttcacttgcttcacacatctagtatttattggtgtgattt 23633844  T
Q  131 ttcatcgaattcgcaaca 148  Q
    |||||||||||| |||||    
T  23633845 ttcatcgaattcacaaca 23633862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 31151653 - 31151754
Alignment:
Q  47 cttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaa 146  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||| |||    
T  31151653 cttgtgtttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttattggtgtgatttttcatcgaattcacaa 31151752  T
Q  147 ca 148  Q
    ||    
T  31151753 ca 31151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 43226381 - 43226495
Alignment:
Q  34 tttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||| ||| | |  ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  43226381 tttctacttttggcttgtattt-taattgttccatacactt-gttttggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttc 43226478  T
Q  132 tcatcgaattcgcaaca 148  Q
    |||||||||||||||||    
T  43226479 tcatcgaattcgcaaca 43226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 7606578 - 7606443
Alignment:
Q  14 tgtgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||    || ||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  7606578 tgtgttcttctcgctgttgttttctactttttggcctgtatttaattgttccatacactttgattttggttgcttgactatctcttgctccacacatcaa 7606479  T
Q  112 gttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  7606478 gttgttattggtgt-atttttcatcgaatttgcaaca 7606443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 11170670 - 11170793
Alignment:
Q  30 ttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    |||||||||||||||||||||||||||    || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||||     
T  11170670 ttgttttctacttttggcttgtatttaattattccatacactttgattttggttgcttgattatcccttactccacacatcaagttgttattaatgtga- 11170768  T
Q  129 ttttcatcgaattcgcaacataaac 153  Q
    |||||||||||||||||||| ||||    
T  11170769 ttttcatcgaattcgcaacaaaaac 11170793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 32219372 - 32219503
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  32219372 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagtttgtt 32219471  T
Q  118 attggtgtga-tttttcatcgaattcgcaaca 148  Q
    ||| |||||| ||||||||||||||| |||||    
T  32219472 atttgtgtgattttttcatcgaattcacaaca 32219503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 42992669 - 42992799
Alignment:
Q  18 ttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgt 116  Q
    ||||||||||| ||||||||| |||||| | | |||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||| ||||    
T  42992669 ttcttctcgccattgttttctgcttttgacatatatttataacttccatacactttgttttggttgtctgattatcccttgctctacacatcaagtttgt 42992768  T
Q  117 tattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||| |||||| |||||||||||||| |||||    
T  42992769 tattagtgtga-ttttcatcgaattcacaaca 42992799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 28761407 - 28761287
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||||| |||||  |||||| || |||||||||| ||||||||| ||||||||| |||||||||||||||||| || |||||||||||    
T  28761407 cgttgttttctacttttg-cttgtgattataatttccatacactttattttggttgtttgattatcacttgctccacacatcaagattattattggtgtg 28761309  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||||||||||||||| |||||    
T  28761308 atttttcatcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 43421380 - 43421260
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtga 127  Q
    |||||| |||||||||||||| ||||||| | |  ||||||||||||||||||||||||| |||  ||||||||||||||||| || |||||||||||||    
T  43421380 tgttttatacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatatcttgctccacacatcaactttgttattggtgtga 43421281  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||    
T  43421280 tttttcatcgaattcgcaaca 43421260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 45883237 - 45883357
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||| ||||||||  |||||| | |  ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  45883237 tgttttctacttctggcttgtgattataattgttccatacactttgttttggttgcttaactatcccttgctccacacatcaagtttgttattggtgtga 45883336  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||    
T  45883337 tttttcatcgaatttgcaaca 45883357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 3314979 - 3315100
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||| |||||||||| ||||||| | |  ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  3314979 tgttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtg 3315078  T
Q  127 atttttcatcgaattcgcaaca 148  Q
     ||| |||||||||||||||||    
T  3315079 ttttctcatcgaattcgcaaca 3315100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 54691538 - 54691417
Alignment:
Q  29 gttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    ||||||||||||||||||||||| ||||||| |  |||||||| |||||||||||||| |||||||| |||||||||||||| || ||||||||| ||||    
T  54691538 gttgttttctacttttggcttgtgtttataattgtttcatacattttgttttggttgcctgattatcacttgctccacacataaatttgttattgatgtg 54691439  T
Q  127 atttttcatcgaattcgcaaca 148  Q
     ||| ||||||||||| |||||    
T  54691438 ttttctcatcgaattcacaaca 54691417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 27101144 - 27101028
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||| ||||||  |||||| | |  ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  27101144 gttgttttctactttttgcttgtgattataattgttccatacactttgttttggttgcctgattattcattgctccacacatcaagttgttattggtgtg 27101045  T
Q  127 at-ttttcatcgaattc 142  Q
    || ||||||||||||||    
T  27101044 atattttcatcgaattc 27101028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 12267942 - 12267819
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||| ||| || ||||||||||||| || ||||||||||||    
T  12267942 cgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactattccctgctccacacatcaaatttgttattggtg 12267843  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    | |||||||||||| ||| |||||    
T  12267842 taatttttcatcgagttcacaaca 12267819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 15781170 - 15781293
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||| ||||| ||||||||| |  |||||||||| |||||  |||||||||||||||| |||||||||||||| ||||||||||||    
T  15781170 cgttgttttctacttttgacttgtgtttataactgttccatacactttattttgcctgcttgattatcccttactccacacatcaagtttgttattggtg 15781269  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    || |||| |||||||||| |||||    
T  15781270 tgtttttccatcgaattcacaaca 15781293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 24980007 - 24980126
Alignment:
Q  33 ttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |    
T  24980007 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgtt 24980106  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    || ||||||||||| |||||    
T  24980107 ttctcatcgaattcacaaca 24980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 880208 - 880087
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||| ||||  ||||||||  |||||||||||||||||  |||||||||||| |||| |||||||||||||| || |||||||||    
T  880208 cgttgttttctacttttggtttgtgattataactgtttcatacactttgttttctttgcttgattattccttactccacacatcaagtttattattggtg 880109  T
Q  125 tga-tttttcatcgaattcgca 145  Q
    ||| ||||||||||||||||||    
T  880108 tgactttttcatcgaattcgca 880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 28181298 - 28181417
Alignment:
Q  31 tgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| |||||||   || |||||||||||||||||||| |||||| | ||||||||||||||||||| |||||||||||||||    
T  28181298 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgattgt-ccttgctccacacatcaagtttgttattggtgtga 28181396  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||  |||||||| |||||    
T  28181397 tttttgttcgaattcacaaca 28181417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 32264001 - 32263881
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||  |||||||| ||||||||||||||| || |||||||| ||||||    
T  32264001 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtctgattatcacttgctccacacatcaaatttgttattagtgtga 32263902  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||| |||||||| |||||    
T  32263901 tttttcttcgaattcacaaca 32263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 880416 - 880302
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||||||| ||||  |||||||| |  ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| |||||||    
T  880416 tgttttctacttttggtttgtgattataactgttccatacactttgttttggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtga 880317  T
Q  128 -tttttcatcgaatt 141  Q
     ||||||||||||||    
T  880316 ttttttcatcgaatt 880302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 18162960 - 18163074
Alignment:
Q  32 gttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    |||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||||||| ||||||||||| || || ||||||||||||    
T  18162960 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaaatttattattggtgtga 18163059  T
Q  128 tttttcatcgaattc 142  Q
    |||||||||||||||    
T  18163060 tttttcatcgaattc 18163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 17795549 - 17795669
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||||||  ||||  ||||||||| |||||| ||| |||||||||||||| ||||  |||||||||||||| || || |||||||||||    
T  17795549 cgttgttttctacttttgt-ttgtgattataacttccatacattttattttggttgcttgactatcagttgctccacacatcaaatttattattggtgtg 17795647  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||||||||||||||| |||||    
T  17795648 atttttcatcgaattcacaaca 17795669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 19103989 - 19104109
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||||||  ||||  ||||||||| |||||| ||| |||||||||||||| ||||  |||||||||||||| || || |||||||||||    
T  19103989 cgttgttttctacttttgt-ttgtgattataacttccatacattttattttggttgcttgactatcagttgctccacacatcaaatttattattggtgtg 19104087  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||||||||||||||| |||||    
T  19104088 atttttcatcgaattcacaaca 19104109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 3307054 - 3307176
Alignment:
Q  31 tgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgt 125  Q
    ||||||||||||||||||||| |||||||   |||||||||||||| ||||| ||| |||||||||||||||| || ||||||||  |||||||||||||    
T  3307054 tgttttctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcccttgcttcatacatcaagttttgttattggtgt 3307153  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    | ||| ||||||||||| |||||    
T  3307154 gttttctcatcgaattcacaaca 3307176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 28101922 - 28101848
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||    
T  28101922 ttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtaatttttcatcgaattcacaaca 28101848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 47701638 - 47701522
Alignment:
Q  30 ttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtg 126  Q
    |||||||||||||||||||||| || |||| | |  ||||||||||||||| |||||||||||||  |||| ||   |||||||||| ||||||||||||    
T  47701638 ttgttttctacttttggcttgtgttcataattgttccatacactttgttttcgttgcttgattattacttgatc---acatcaagtttgttattggtgtg 47701542  T
Q  127 atttttcatcgaattcgcaa 146  Q
    ||||||||||||||||||||    
T  47701541 atttttcatcgaattcgcaa 47701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 51943667 - 51943752
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||||||||||||||||||| ||||||| | |  || |||||||||||||||||||||| |||||||||||||||||||||||||    
T  51943667 tgttttctacttttggcttgtgtttataattgttccaaacactttgttttggttgcttgactatcccttgctccacacatcaagtt 51943752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 561739 - 561640
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||| ||||||||||||||  ||| ||||||||||||||| | ||||||||||||||    
T  561739 tgttttctacttttg-cttgtgtttataacttccatacactttgttt-ggttgcttgattattacttactccacacatcaagtattttattggtgtgatt 561642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 1626649 - 1626525
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||  ||||||| ||||| ||||||| | |  ||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  1626649 cgttgtttttcacttttgacttgtgtttataattgttccatacactttgtttttgttgcttgattattccttgctccacacatcaagtttgttattggtg 1626550  T
Q  125 tgatttt-tcatcgaattcgcaaca 148  Q
    || |||| | || ||||||||||||    
T  1626549 tggttttcttatggaattcgcaaca 1626525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 6484652 - 6484775
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||||| | |  ||||||||||| |||||||||||| ||||| |||||||||||||||| || |||||||| |||||    
T  6484652 tgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgctccacacatcaaatttgttattagtgtg 6484751  T
Q  127 atttttcatcgaattcgcaacata 150  Q
    |||||| || |||||| |||||||    
T  6484752 attttttattgaattcacaacata 6484775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 5926731 - 5926615
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||| ||||| ||||||| | |  | ||||||||||||||||| ||||||||| |||| || ||||||| ||| ||||||||||||    
T  5926731 cgttgttttctacttttg-cttgtgtttataattgttccttacactttgttttggttacttgattattccttacttcacacatgaagtttgttattggtg 5926633  T
Q  125 tgatttttcatcgaattc 142  Q
    ||| ||||||||||||||    
T  5926632 tgagttttcatcgaattc 5926615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 42992553 - 42992606
Alignment:
Q  18 ttcttctcgccgttgttttctacttttggcttgtatttataactttcatacact 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42992553 ttcttctcgccgttgttttctacttttggcttgtatttataacttccatacact 42992606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 53468414 - 53468294
Alignment:
Q  33 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||||||||| ||||  ||||| | ||||||||||||||||| |||||||||||||| ||    
T  53468414 ttttctacttttgacttgtgtttataattgttccatacactttgttttggctgctccattattcattgctccacacatcaagtttgttattggtgtggtt 53468315  T
Q  130 tt-tcatcgaattcgcaacat 149  Q
    || |||||||||| |||||||    
T  53468314 ttctcatcgaatttgcaacat 53468294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 25635671 - 25635788
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    |||||||||||||||||| ||||| ||||||||| | |  ||||| || ||||||||||||||||  |||||||||||||||||||  ||||| ||||||    
T  25635671 cgttgttttctacttttg-cttgtgtttataactgttacccactt-gtattggttgcttgattattacttgctccacacatcaagtatttattagtgtga 25635768  T
Q  128 tttttcatcgaattcgcaaca 148  Q
     |||||||||||||| |||||    
T  25635769 -ttttcatcgaattcacaaca 25635788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 36957651 - 36957713
Alignment:
Q  79 ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattc 142  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  36957651 ggttgcttgattatcccttgctccacacatcaagttgttattgatatga-ttttcatcgaattc 36957713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 51674682 - 51674607
Alignment:
Q  76 tttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt-tcatcgaattcgcaacat 149  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  51674682 tttggttgcttgattattccttgctccatacatcaagtttgttattggtgtgattttctcatcgaattcacaacat 51674607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 47148861 - 47148745
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||| ||||| ||||||| | |  |||||||||||||||||||| |||||||||       |||||||||||| ||||||||||||    
T  47148861 cgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgtttgattatc-------ccacacatcaagtttgttattggtg 47148769  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    ||| |||||||| ||||| |||||    
T  47148768 tgagttttcatcaaattcacaaca 47148745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 25688121 - 25687998
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| |||| || | |  ||||||||||| |||||||||  |||||||| |||||||||||||| ||| ||||||||||||||    
T  25688121 tgttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcacttgctccacacataaagtttgttattggtgtg 25688022  T
Q  127 a--tttttcatcgaattcgcaaca 148  Q
    |  ||| |||||||||| ||||||    
T  25688021 agttttctcatcgaatttgcaaca 25687998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 53591512 - 53591597
Alignment:
Q  64 catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| || ||||||||| |||| ||| |||| |||||| |||||    
T  53591512 catacattttgttttggttgcttgattatcccttgttccacacatcaaatttgttattgatgtgttttctcattgaattcacaaca 53591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 4666808 - 4666922
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    |||||| ||||||||| |||| ||||||| |  |||||||||||| |||||||||| |||| ||| ||| ||||||||||| || || ||||||||||||    
T  4666808 tgttttatacttttggtttgtttttataattgtttcatacactttattttggttgcatgataatcacttactccacacatcaaatttattattggtgtga 4666907  T
Q  128 tttttcatcgaattc 142  Q
    |||||| || |||||    
T  4666908 tttttcttcaaattc 4666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 36871265 - 36871149
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat-t 129  Q
    |||||||||  ||| |||||| ||||||||| |||  ||||| ||||||||||||||||||| | ||||||||||||||||||  |||| |||||||| |    
T  36871265 tgttttctatcttttgcttgtgtttataactgtcacccactt-gttttggttgcttgattattc-ttgctccacacatcaagtatttatcggtgtgattt 36871168  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||| ||||||| |||||    
T  36871167 tttcaacgaattcacaaca 36871149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 35917937 - 35917876
Alignment:
Q  88 attatcccttgctccacacatcaagttgttattggtgtga-tttttcatcgaattcgcaaca 148  Q
    ||||||||||| |||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  35917937 attatcccttgttccatacatcaagttgttattggtgtaattttttcatcgaattcgcaaca 35917876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 25634178 - 25634294
Alignment:
Q  29 gttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    |||||||||||||||| |||||| ||||||| | | |  ||| |||| ||||||||||||||||  |||||||| ||||| ||||  ||||||||||||     
T  25634178 gttgttttctactttt-gcttgtgtttataattgttacccac-ttgtattggttgcttgattattacttgctccccacattaagtatttattggtgtga- 25634274  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||    
T  25634275 ttttcatcgaattcacaaca 25634294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 35919105 - 35919018
Alignment:
Q  14 tgtgttcttctcgccgttg-ttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgc 99  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    || ||||||||||| |||||||||  ||||||||||||||    
T  35919105 tgtgttcttctcgccgttgtttttctacttttggcttctatttaattgttccatacactttgattttggttgtctgattatcccttgc 35919018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 48361634 - 48361546
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||| |||||  |||||| | |  ||||||||||||||||||||||||||||| | ||| |||| |||| |||||    
T  48361634 cgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattattcattgttccatacattaagtt 48361546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 6232128 - 6232208
Alignment:
Q  64 catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||| |||||||||||||||||    || ||||||||||| || |||||||| |||||| ||||||||||||||||||||    
T  6232128 catacactttattttggttgcttgatta----ttactccacacatcaaatttgttattagtgtga-ttttcatcgaattcgcaaca 6232208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 43228695 - 43228733
Alignment:
Q  110 aagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  43228695 aagttgttattggtgtgatttctcatcgaattcgcaaca 43228733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 22625882 - 22625829
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcgcaaca 148  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||| |||||    
T  22625882 ttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaaca 22625829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 24181669 - 24181749
Alignment:
Q  68 cactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||| ||||||||||||||||||   || ||||||||||||||| | ||||| |||||| ||||| |||||||| |||||    
T  24181669 cactttattttggttgcttgattattaatttctccacacatcaagtattttattagtgtga-ttttcttcgaattcacaaca 24181749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 53597575 - 53597644
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||   ||||||||||||| |||| | |||||||||||| |||||||||||||| |||||    
T  53597575 ttggttgcttgattat--tttgctccacacataaagtattttattggtgtga-ttttcatcgaattcacaaca 53597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 27421004 - 27421055
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||    
T  27421004 ttgctcaacacatcaagtt-ttattggtgtgatttttcaatgaattcacaaca 27421055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 149 - 466
Target Start/End: Original strand, 37030627 - 37030944
Alignment:
Q  149 taaactaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcacct 248  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||||| ||||||||||| ||||||||||||    
T  37030627 taaactaaccttggtttcatattgaacactagctttgctaaggaactctgctttaagcttttcagtagtagtcaatgcattcatcctctcaacttcacct 37030726  T
Q  249 tgtaactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagccgccttcttcttagccaactcagaat 348  Q
    ||||||||||| ||||||||   ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  37030727 tgtaactcagcttcccttagtttcacagccttcttcgcctcgacttcagccacctgagccgccttggtccaagccgctttcttcttagccaactcagaat 37030826  T
Q  349 tagcctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctctccggtcctctgcagtgc 448  Q
    |||| | |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||| |||    
T  37030827 tagcttgagccacttcagcctctctttgattctcaaaaactttcacttcagtcctcactttaattccctccttctcaccctctccagctctctgcattgc 37030926  T
Q  449 aataacttttgtctctgc 466  Q
    |||||| || ||||||||    
T  37030927 aataaccttcgtctctgc 37030944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 152 - 463
Target Start/End: Complemental strand, 32592694 - 32592383
Alignment:
Q  152 actaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcaccttgt 251  Q
    ||||||||| |||||||| ||||||||||||||| |||| || || |||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||     
T  32592694 actaaccttggtttcatactgaacactagctttgctaagtaaatcagctttaagcttctcagtagtagtcaaagcattcatcctctcaacctcaccctgc 32592595  T
Q  252 aactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagccgccttcttcttagccaactcagaattag 351  Q
    |||||||| |||||||||||||| || ||    || || ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32592594 aactcagcttcccttagagccacagctttagcagcttcgacttcagccacttgagccgccttagtccaagccgctttcttcttcgccaactcagaattag 32592495  T
Q  352 cctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctctccggtcctctgcagtgcaat 451  Q
     ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||| | ||||||||  |||||    
T  32592494 actcagccacttcagcctctctttgattctcaaaaaccttcacttcagtcctaactctaaatccctccttgtcactctctccagccctctgcatagcaat 32592395  T
Q  452 aacttttgtctc 463  Q
    || ||| |||||    
T  32592394 aattttcgtctc 32592383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 9459411 - 9459277
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9459411 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 9459312  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||| |||||    
T  9459311 tgttattggtgtgatttttcatcgaattcacaaca 9459277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 9463238 - 9463104
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9463238 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 9463139  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||| |||||    
T  9463138 tgttattggtgtgatttttcatcgaattcacaaca 9463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 16226472 - 16226607
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16226472 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccacacatcaag 16226571  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  16226572 ttgttattggtgtgatttttcatcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 16231867 - 16232002
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  16231867 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatccgttgctccacacatcaag 16231966  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  16231967 ttgttattggtgtgatttttcatcgaattcacaaca 16232002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 28842798 - 28842931
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28842798 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttactccacacatcaagt 28842897  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||| |||||| ||||||||||||||||||||    
T  28842898 tgttattagtgtga-ttttcatcgaattcgcaaca 28842931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 13358877 - 13359018
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  13358877 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgactatcccttactccacacatcaag 13358976  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaacataaacta 155  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  13358977 ttgttattggtgtga-ttttcatcgaattcgcaacaaaaacta 13359018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 39932378 - 39932514
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39932378 tgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttccatacactttgttttggttgcttgattatcccttgctccacacatcaag 39932477  T
Q  113 -ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
     |||||||||||||||||||||||||||||| |||||    
T  39932478 tttgttattggtgtgatttttcatcgaattcacaaca 39932514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 51750343 - 51750476
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51750343 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 51750442  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||| |||||||||||||||    
T  51750443 tgttattggtgtgattttt-atcgaattcgcaaca 51750476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 13762140 - 13762275
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13762140 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatccctttctccacacatcaagt 13762239  T
Q  114 tgttattggtgtgatttt-tcatcgaattcgcaaca 148  Q
    |||||||||||||||||| |||||||||||||||||    
T  13762240 tgttattggtgtgattttctcatcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 46431682 - 46431548
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  46431682 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgttttggttgcttgattatctcttgctccaaacatcaagt 46431583  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||    
T  46431582 tgttattggtgtgatttttcatcgaattcgcaaca 46431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 28840983 - 28841088
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28840983 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccactcatcaagt 28841082  T
Q  114 tgttat 119  Q
    ||||||    
T  28841083 tgttat 28841088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 13447250 - 13447116
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13447250 tgtgtttttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 13447151  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    |||||||||||||| |||||||||||||||||||||    
T  13447150 tgttattggtgtga-ttttcatcgaattcgcaacat 13447116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 15294811 - 15294678
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15294811 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 15294712  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||| ||||||||    
T  15294711 tgttattggtgtga-ttttcatcgaaatcgcaaca 15294678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 10399805 - 10399669
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  10399805 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag 10399706  T
Q  113 ttgttattggtgtgat-ttttcatcgaattcgcaaca 148  Q
    |||||||||||||||| ||||||||||||||||||||    
T  10399705 ttgttattggtgtgatattttcatcgaattcgcaaca 10399669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 31735498 - 31735363
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||| ||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31735498 tgtgttcttctcgccgttgttttcta-ttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 31735400  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacata 150  Q
    |||||||||||| |||| |||||||||||||||||||    
T  31735399 tgttattggtgtaatttctcatcgaattcgcaacata 31735363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 23786145 - 23786278
Alignment:
Q  16 tgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||    || ||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  23786145 tgttcttctcgccgttgttttctactttttggcttgtatttaattgttccatacgctttgttttggttgcttaattatcccttgctccacacatcaagtt 23786244  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||| |||||    
T  23786245 gttattggtgtgatttttcatcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 23816195 - 23816325
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| ||||||||||||||||| |||||  |||||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23816195 tctcgctgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagttgttat 23816294  T
Q  120 tggtgtgatttttcatcgaattcgcaacata 150  Q
    |||||||||||||||||||||||||||||||    
T  23816295 tggtgtgatttttcatcgaattcgcaacata 23816325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 47177666 - 47177801
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  47177666 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag 47177765  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||| ||||||||| |||||    
T  47177766 ttgttattggtgtgatttttgatcgaattcacaaca 47177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 47906576 - 47906705
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| |||||||||||||||||||||||  |||||| | |  ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  47906576 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttggtttggttgcttgattatctcttgctccacacatcaagttgttat 47906675  T
Q  120 tggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||||||||||||||||||    
T  47906676 tggtgtgatttttcatcgaattcgcaacat 47906705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 220 - 466
Target Start/End: Original strand, 51824717 - 51824954
Alignment:
Q  220 tcaaagcattcatcctttcaacttcaccttgtaactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtcca 319  Q
    |||||||||||||| | ||||| |||||||| |||||||| ||||||||| |||| |  ||    |||||||||| |||||| ||||| |||||||||||    
T  51824717 tcaaagcattcatcttctcaacctcaccttgcaactcagcttcccttagaaccacagatttagcagcctcaacttgagccacttgagcagccttagtcca 51824816  T
Q  320 agccgccttcttcttagccaactcagaattagcctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctcc 419  Q
    |||||| |||||| | ||||||||||| ||||||||         ||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||    
T  51824817 agccgctttcttcatcgccaactcagagttagcctc---------agcctctctttgattctcaaaaaccttcacttcagtcctaactctaaatccctcc 51824907  T
Q  420 ttgtcaccctctccggtcctctgcagtgcaataacttttgtctctgc 466  Q
    |||| || |||||| | ||||||||  ||||||||||| ||||||||    
T  51824908 ttgttactctctccagccctctgcatcgcaataactttcgtctctgc 51824954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 47180017 - 47180154
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||| ||||| ||||| |||||| |||||||||||||||||||||||||    
T  47180017 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgattttgattgcttaattatcccttgctccacacatcaag 47180116  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaacata 150  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  47180117 ttgttattggtgtgatttttgatcgaattcacaacata 47180154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 20291760 - 20291894
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||| ||| |||||||| |||||||||| ||||||||||||||||||    
T  20291760 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctccacacatcaag 20291859  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  20291860 ttgttattggtgtga-ttttcatcgaattcgcaaca 20291894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 51757834 - 51757973
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-----ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacat 108  Q
    |||||||||||||||||||||||     |||||||||||||||||| |    || |||||||||||||||||||||||||||||||||||||||||||||    
T  51757834 tgtgttcttctcgccgttgtttttttccctacttttggcttgtattcaattgttccatacactttgttttggttgcttgattatcccttgctccacacat 51757933  T
Q  109 caagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  51757934 caagttgttattggtgtcatttttcatcgaattcacaaca 51757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 24325967 - 24326104
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||| |||||||||| ||| |||| ||||||||||    || ||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  24325967 tgtgttcttctcaccgttgttttttacctttgacttgtatttaattgttccatacactttactttggttgcttgattatcccttactccacacatcaagt 24326066  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacataa 151  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24326067 tgttattggtgtgatttttcatcgaattcacaacataa 24326104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 20302745 - 20302880
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||| ||| |||||||| |||||||||| ||||||||| ||||||||    
T  20302745 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctccagacatcaag 20302844  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20302845 ttgttattggtgtga-ttttcatcgaattcgcaacat 20302880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 2949199 - 2949078
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2949199 tgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtga 2949100  T
Q  128 tttttcatcgaattcgcaacat 149  Q
    ||||||||||||||| ||||||    
T  2949099 tttttcatcgaattcacaacat 2949078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 6995669 - 6995540
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||||||  | |  |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  6995669 tctcgctgttgttttctacttttggcttgtgtttatagttgttccatacactttgttttgattgcttgactatcccttgctccacacatcaagtttgtta 6995570  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||    
T  6995569 ttggtgtgatttttcatcgaattcgcaaca 6995540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 25251244 - 25251127
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||||  |||||| |  ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  25251244 cgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtg 25251145  T
Q  125 tgatttttcatcgaattc 142  Q
    ||||||||||||||||||    
T  25251144 tgatttttcatcgaattc 25251127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 50078759 - 50078635
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  50078759 cgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtg 50078660  T
Q  125 tgatttt-tcatcgaattcgcaaca 148  Q
    ||||||| |||||||||||||||||    
T  50078659 tgattttctcatcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 31490226 - 31490345
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    ||||||||||||||| ||||| ||||||| |  |||||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  31490226 tgttttctacttttgacttgtgtttataattgtttcatacactttattttggttgcttgattatctcttgctccacacatcaagtttgtattggtgtgat 31490325  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||    
T  31490326 ttttcatcgaattcgcaaca 31490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 2617829 - 2617955
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttatt 120  Q
    |||||| ||||||||||||||||||||||||||||    || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  2617829 tctcgctgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaagttgttatt 2617928  T
Q  121 ggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||  ||||||||||||||||||||    
T  2617929 ggtgtg-gttttcatcgaattcgcaaca 2617955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 15916706 - 15916821
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||  |||||||||||| ||||    
T  15916706 ttttctacttttggcttgtgtttataacttccatacactttgttttggttgcttgattgttacttgctccacacatcaagtatttattggtgtgactttt 15916805  T
Q  133 catcgaattcgcaaca 148  Q
    |||||||||| |||||    
T  15916806 catcgaattcacaaca 15916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 16429277 - 16429387
Alignment:
Q  39 acttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcg 137  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  16429277 acttttggtttgtgtttataacttccatacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcg 16429376  T
Q  138 aattcgcaaca 148  Q
    ||||| |||||    
T  16429377 aattcacaaca 16429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 9241054 - 9240940
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  9241054 tgttttctacttttggtttgtatttataattgtttcatacactttgttttggttgcttgattatcacttgctccacacttcaagtttgttattggtgtga 9240955  T
Q  128 tttttcatcgaattc 142  Q
    ||||| |||||||||    
T  9240954 ttttttatcgaattc 9240940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 39462826 - 39462956
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gtt 117  Q
    |||||| ||||||||||| ||||||||||| ||||||| | |  ||||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||    
T  39462826 tctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttgattttgattgcctgattatcccttgctccacacatcaagtttgtt 39462925  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||    
T  39462926 attggtgtgatttttcatcgaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 4131345 - 4131220
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||| ||||||||||| ||||||| | |  |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  4131345 cgttgttttctatttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgctccgcacatcaagtttgttattggtg 4131246  T
Q  125 tga-tttttcatcgaattcgcaacat 149  Q
    ||| ||||||||||||||||||||||    
T  4131245 tgagtttttcatcgaattcgcaacat 4131220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 51752667 - 51752805
Alignment:
Q  14 tgtgttcttctcgccgttgtttt------ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacaca 107  Q
    |||||||||||||||||||||||      |||||||||||||||||| |    |||||||||||||||||||||||||||||||||||||||||||||||    
T  51752667 tgtgttcttctcgccgttgtttttttttcctacttttggcttgtattcaattgtttcatacactttgttttggttgcttgattatcccttgctccacaca 51752766  T
Q  108 tcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    | ||||| |||||||||||| |||||||||||||| |||||    
T  51752767 t-aagttattattggtgtga-ttttcatcgaattcacaaca 51752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 40134255 - 40134378
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgat--tatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||   ||||||||| ||||||||||||||||||||| ||||  |||| |||||||||||||||||| ||||||||| ||    
T  40134255 cgttgttttctacttttggcttgagattataacttccatacactttgttttggttgcctgattatatcacttgctccacacatcaagtttgttattgatg 40134354  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||| |||||    
T  40134355 tgatttttcatcgaattcacaaca 40134378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 50307519 - 50307389
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||||||||||||| |||||||| || ||    
T  50307519 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccagacatcaagtttatt 50307420  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||| |||||    
T  50307419 attggtgtgatttttcatcgaattcccaaca 50307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 152 - 274
Target Start/End: Original strand, 31527272 - 31527394
Alignment:
Q  152 actaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcaccttgt 251  Q
    ||||||||| |||||||| | ||||||||||||| |||| || || |||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||     
T  31527272 actaaccttggtttcatactcaacactagctttgctaagtaaatcagctttaagcttctcagtagtagtcaaagcattcatcctctcaacctcaccctgc 31527371  T
Q  252 aactcagcatcccttagagccac 274  Q
    |||||||| ||||||||||||||    
T  31527372 aactcagcttcccttagagccac 31527394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 31527430 - 31527548
Alignment:
Q  345 gaattagcctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctctccggtcctctgca 444  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||| | ||||||||    
T  31527430 gaattagcctcagccacttcagcctctctttgattctcaaaaaccttcacttcagtcctaactctaaatccctccttgtcactctctccagccctctgca 31527529  T
Q  445 gtgcaataacttttgtctc 463  Q
      ||||||| ||| |||||    
T  31527530 tagcaataattttcgtctc 31527548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 2510319 - 2510202
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||    || ||||||||||||||| |||||||||||||| |||||| |||| |||||||    
T  2510319 tgtgttcttctcgccgttgttttctatttttgacttgtttttaattgttccatacactttgttttcgttgcttgattatctcttgcttcacatatcaagt 2510220  T
Q  114 tgttattggtgtgatttt 131  Q
    ||||||||||||||||||    
T  2510219 tgttattggtgtgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 18839902 - 18840022
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtga 127  Q
    ||||||||| ||||||||||| ||||||| | |  |||||||||||||| | || ||||||||| ||||||||||||||||||||| |||||||||||||    
T  18839902 tgttttctagttttggcttgtgtttataattgttccatacactttgtttcgattacttgattattccttgctccacacatcaagtttgttattggtgtga 18840001  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||    
T  18840002 tttttcatcgaattcgcaaca 18840022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 50248540 - 50248417
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    |||||||||| |||||||||||||  |||||| | |  |||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  50248540 cgttgttttcaacttttggcttgtggttataattgttccatacactttgttttggttgcttgattatcccttactccacacatcaaatttgttattggtg 50248441  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    |||||| ||||||||||| |||||    
T  50248440 tgatttatcatcgaattcacaaca 50248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 17319203 - 17319321
Alignment:
Q  33 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 129  Q
    ||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||||||| |||| ||||||||||| || |||||||||||| ||||    
T  17319203 ttttctacttttggcttgtgtttataactattccatacactttgttttggttgtttgattattccttactccacacatcaaatttgttattggtgcgatt 17319302  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||    
T  17319303 tttcatcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 28207042 - 28206912
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  28207042 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgtt 28206943  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||| ||| ||||||||||| |||||    
T  28206942 attggtgtgttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 3579550 - 3579430
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||||     
T  3579550 tgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg- 3579452  T
Q  128 tttttcatcgaattcgcaacat 149  Q
    ||||||||||||||| ||||||    
T  3579451 tttttcatcgaattcacaacat 3579430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 8349021 - 8348905
Alignment:
Q  30 ttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatt 129  Q
    ||||||||||||||||  |||| |||||||||| |||||||||||||| ||||||||||||||  |||| ||||||| ||||||| ||||||||||||||    
T  8349021 ttgttttctacttttgt-ttgtgtttataacttccatacactttgttt-ggttgcttgattattacttgttccacacgtcaagtttttattggtgtgatt 8348924  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||    
T  8348923 tttcatcgaattcacaaca 8348905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 25248518 - 25248397
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||| ||| | ||||||| |  ||||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||| |||||    
T  25248518 tgttttctacttttgacttttgtttataattgtttcatacactttgttttggttgcttgactattccttactccacacatcaagtttgttattgttgtga 25248419  T
Q  128 tttttcatcgaattcgcaacat 149  Q
    ||||||||||||||| ||||||    
T  25248418 tttttcatcgaattcacaacat 25248397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 14097939 - 14097815
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||||| | |  ||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  14097939 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgcttcacacatcaagtttgttattggt 14097840  T
Q  124 gtgatttttcatcgaattcgcaaca 148  Q
    ||| |||||| ||||||||||||||    
T  14097839 gtgttttttcttcgaattcgcaaca 14097815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 14183574 - 14183455
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    ||||||||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||  |||||| |||||||||||| | |||||||||||    
T  14183574 cgttgttttcttcttttg-cttgtgtttataacttccatacactttgttttggttgcttgattattacttgcttcacacatcaagtattttattggtgtg 14183476  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||||| ||||||||| |||||    
T  14183475 attttt-atcgaattcacaaca 14183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 31424982 - 31424862
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||| ||||| ||||||| | ||  ||||| |||||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  31424982 tgttttctacttttgacttgtgtttataattgtcccatacattttgttatggttgcttgagtattccttgctccacacatcaagtttgttattggtgtga 31424883  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||| ||||||||||||    
T  31424882 tttttcattgaattcgcaaca 31424862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 11457442 - 11457327
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| |||| || | |  |||| |||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||||||    
T  11457442 tgttttctacttttggcttgtgtttaaaattgttccatatactttgttttggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtga 11457343  T
Q  128 tttttcatcgaattcg 143  Q
    ||||||||||||||||    
T  11457342 tttttcatcgaattcg 11457327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 16432705 - 16432813
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatttt 131  Q
    |||||||||||||| || | ||||||||||||||||||| ||||||| |||| |||||||  ||||||||||||||| || |||||||||||||||||||    
T  16432705 ttttctacttttggtttatgtttataactttcatacactgtgttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtgatttt 16432804  T
Q  132 tcatcgaat 140  Q
    |||||||||    
T  16432805 tcatcgaat 16432813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 27336914 - 27336799
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  27336914 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 27336815  T
Q  118 attggtgtgatttttc 133  Q
    |||| |||||||||||    
T  27336814 attgatgtgatttttc 27336799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 6115074 - 6114959
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||| ||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||||||||||||| | |||  ||||||    
T  6115074 cgttgtcttctacttttgacttgtatttataacttccatacattttattttggttgcttgattatcactttctccacacatcaagtatattaccggtgtg 6114975  T
Q  127 atttttcatcgaattc 142  Q
    ||||||||| ||||||    
T  6114974 atttttcattgaattc 6114959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 18800543 - 18800429
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||   |||||| ||||||||||| | || ||||||||    
T  18800543 cgttgttttctacttttggcttgtgtttataacttccatacactttgttttgattgcttgattattatttgctctacacatcaagtattttgttggtgtg 18800444  T
Q  127 atttttcatcgaattc 142  Q
    | ||||||||||||||    
T  18800443 a-ttttcatcgaattc 18800429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 47451943 - 47452065
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 125  Q
    |||| |||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||    
T  47451943 gttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcgacacatcaaatttgttattgatgt 47452042  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    |||||||||| |||||| |||||    
T  47452043 gatttttcattgaattcacaaca 47452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 17186096 - 17185979
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    |||||||||||||||  ||||  ||||||||| ||||||||||||||||||||||||| |||| ||||||||||| |||||| || ||||||||||||||    
T  17186096 tgttttctacttttgt-ttgtgattataacttccatacactttgttttggttgcttgactatcacttgctccacatatcaagtttattattggtgtgatt 17185998  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||| ||||| |||||    
T  17185997 tttcatcaaattcacaaca 17185979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 13215398 - 13215518
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||||||||||     
T  13215398 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgactatcccttgctccacacatcaagtttattattggtgtgt 13215497  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| ||| ||||||| |||||    
T  13215498 tttctcaacgaattcacaaca 13215518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 17324388 - 17324484
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||| ||||||| |||  ||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  17324388 tgttttctacttttggcttgtgtttataattttttcatacactttgttatggttgcttgattattccttgctccacacatcaagtttgttattggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 27339105 - 27338990
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||    
T  27339105 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgttccacacatcaagtttgtt 27339006  T
Q  118 attggtgtgatttttc 133  Q
    |||| |||||||||||    
T  27339005 attgatgtgatttttc 27338990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 30780361 - 30780482
Alignment:
Q  32 gttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctc--cacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||  |||| ||||||| |  ||||||||||||||||||||||||||||||| |||| |||  ||||||||||| ||||||||||||||    
T  30780361 gttttctacttttgatttgtgtttataattgtttcatacactttgttttggttgcttgattattccttactccacacacatcaagtttgttattggtgtg 30780460  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    | |||||||||||||| |||||    
T  30780461 agttttcatcgaattcacaaca 30780482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 31422789 - 31422702
Alignment:
Q  66 tacactttgttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacataaa 152  Q
    |||||||| |||| |||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  31422789 tacactttattttagttgattgattattccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcgcaacataaa 31422702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 18307423 - 18307543
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||| | ||||||  ||||||||||||||||| ||||||||| |||      
T  18307423 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcatttgctccacacatcaagtttgttattgatgtat 18307522  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| |||||||||||||||||    
T  18307523 tttctcatcgaattcgcaaca 18307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 41647234 - 41647355
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||||| |  ||||||||||||| |||||||||  |||||||| |||||||| ||||||||| ||||||||||||||    
T  41647234 tgttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgctccgcacatcaagtttgttattggtgtg 41647333  T
Q  127 atttttcatcgaattcgcaaca 148  Q
     ||| ||||||||||| |||||    
T  41647334 ttttctcatcgaattcacaaca 41647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 16428966 - 16429043
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacat 108  Q
    |||||||||||||||| |||| ||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||    
T  16428966 tgttttctacttttggtttgtgtttataacttctatacactttgttttggttgcctgattatcacttgctccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 30790350 - 30790250
Alignment:
Q  48 ttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaa 146  Q
    |||| |||||||||| |||||||||||||||||||||||||||||  |||||| ||||||||| || | |||||||||||| |||||||||||||| |||    
T  30790350 ttgtgtttataacttccatacactttgttttggttgcttgattattacttgcttcacacatcaggtattttattggtgtga-ttttcatcgaattcacaa 30790252  T
Q  147 ca 148  Q
    ||    
T  30790251 ca 30790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 12302475 - 12302349
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||||| | |  ||||||||||| |||||||| | |||||||| |||||||||||||||||| |||||||||||    
T  12302475 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctccacacatcaagtttgttattggt 12302376  T
Q  124 gtg--atttttcatcgaattcgcaaca 148  Q
    |||   ||||| |||||||||||||||    
T  12302375 gtgtttttttttatcgaattcgcaaca 12302349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 13125428 - 13125310
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgtt-attggtgtg 126  Q
    |||||||||||||||||| ||||| ||||||||| |||  ||||| |||||||||||||||||||   ||||||||||||||||||  || |||||||||    
T  13125428 cgttgttttctacttttg-cttgtgtttataactgtcacccactt-gttttggttgcttgattattt-ttgctccacacatcaagtaatttattggtgtg 13125332  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||||| | |||||||||||||    
T  13125331 atttttgaacgaattcgcaaca 13125310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 28998220 - 28998094
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataa--ctttcatacactttg---ttttggttgcttgattatcccttgctccacacatcaag-ttgttattg 121  Q
    |||||||||||||||||||||||| |||||||   || |||||||||||    ||||||||| |||||||| |||||||||||||||||| |||| ||||    
T  28998220 cgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattg 28998121  T
Q  122 gtgtgatttttcatcgaattcgcaaca 148  Q
    ||||| ||| || |||||||| |||||    
T  28998120 gtgtgttttctcttcgaattcacaaca 28998094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 29003936 - 29003810
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataa--ctttcatacactttg---ttttggttgcttgattatcccttgctccacacatcaag-ttgttattg 121  Q
    |||||||||||||||||||||||| |||||||   || |||||||||||    ||||||||| |||||||| |||||||||||||||||| |||| ||||    
T  29003936 cgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattg 29003837  T
Q  122 gtgtgatttttcatcgaattcgcaaca 148  Q
    ||||| ||| || |||||||| |||||    
T  29003836 gtgtgttttctcttcgaattcacaaca 29003810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 38925451 - 38925328
Alignment:
Q  30 ttgttttctacttttggcttgtatttataacttt--catacactttg--ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||| ||||||| | |  |||||||||||  |||||||||| |||||||| ||| |||||||||||||| || |||||||||    
T  38925451 ttgttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcacttactccacacatcaagtttattattggtg 38925352  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    || ||| ||||| ||||| |||||    
T  38925351 tgttttctcatcaaattcacaaca 38925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 15823861 - 15823968
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||| |||||  |||||| | |  ||||||||||| |||||||||| |||||| ||||| |||||||||||||| ||||||||||||    
T  15823861 gttgttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattaccccttactccacacatcaagtttgttattggtg 15823960  T
Q  125 tgattttt 132  Q
    ||||||||    
T  15823961 tgattttt 15823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 25860378 - 25860270
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| ||||||||||||||||||||||| |||||||   || |||||||||||||||||    |||| ||||||||||||||||||||||| ||| ||    
T  25860378 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttgg----ttgactatcccttgctccacacatcaagtttgata 25860283  T
Q  119 ttggtgtgatttt 131  Q
    |||||||| ||||    
T  25860282 ttggtgtggtttt 25860270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 8347241 - 8347136
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||||| ||| | ||||||||||||||| ||||||||| ||||||||||||||  ||| |||||| ||||||||  ||| | |||||||||    
T  8347241 tgttttctacttttg-cttatgtttataactttcatatactttgttt-ggttgcttgattattacttactccacgcatcaagtatttacttgtgtgattt 8347144  T
Q  131 ttcatcga 138  Q
    ||||||||    
T  8347143 ttcatcga 8347136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 51824287 - 51824353
Alignment:
Q  149 taaactaaccttagtttcatattgaacactagctttgttaaggaactcggctttaagcttctcagta 215  Q
    |||||||||||| |||||||||||||||||||||||| |||| || || ||||||||||||||||||    
T  51824287 taaactaaccttggtttcatattgaacactagctttgctaagtaaatcagctttaagcttctcagta 51824353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 17324560 - 17324484
Alignment:
Q  68 cactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttttcatcgaattc 142  Q
    ||||||||| ||| ||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||||||    
T  17324560 cactttgttatggctgcttgactatcccttactccacacatcaagtttgttattggtgtgagtttttcatcgaattc 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 26519381 - 26519295
Alignment:
Q  53 tttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattc 142  Q
    |||||||||| |||||||||||||| ||||||||||||||  |||||||||||||  |||| | |||||||||||| ||||||||||||||    
T  26519381 tttataacttccatacactttgttt-ggttgcttgattattacttgctccacaca--aagtattttattggtgtga-ttttcatcgaattc 26519295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 25128233 - 25128301
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattc 142  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||  |||| ||||||| ||||||    
T  25128233 ttttggttgcttgattattccttgctctacacatcaagtttgttattgacgtgagttttcattgaattc 25128301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 50076643 - 50076563
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacac 106  Q
    |||||||||||||||||  ||||| ||||||| | |  ||||||||||||||| ||||||| ||||| | |||||||||||    
T  50076643 cgttgttttctacttttaacttgtgtttataattgttccatacactttgttttagttgctttattattcattgctccacac 50076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 155998 - 156097
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    ||||||||| ||||||||||| ||||||||| |||  ||||| ||||| ||| ||||||||  | || ||||||||||||||| | ||||||||||||||    
T  155998 tgttttcta-ttttggcttgtgtttataactgtcacccactt-gttttagttacttgatta--cttttctccacacatcaagtattttattggtgtgatt 156093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 13127656 - 13127576
Alignment:
Q  30 ttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||| |||||| ||||| ||||||||| |||  ||||| |||||||||||||||||||   ||||||||||||||||||    
T  13127656 ttgttttctccttttg-cttgtgtttataactgtcacccactt-gttttggttgcttgattat-ttttgctccacacatcaagt 13127576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 15669344 - 15669281
Alignment:
Q  48 ttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||   ||||| ||||||||||    
T  15669344 ttgtgtttataacttcgatacactttgttttgattgcttgattattatttgcttcacacatcaa 15669281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 26332483 - 26332400
Alignment:
Q  27 ccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||| | |||| ||||||||| |||  ||  |||||||| ||||||||||||   ||||||||||||||||||    
T  26332483 ccgttgttttctactttt-gtttgtgtttataactatcacccatgttgttttgattgcttgattat--tttgctccacacatcaagt 26332400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 28279578 - 28279680
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||||||||||||| | ||||| ||||||| | |||  ||| ||| |||||||| ||| ||| |  |||||||||||||||||| | |||||||||||    
T  28279578 cgttgttttctactttcg-cttgtgtttataattgtcacccacgttgatttggttgtttgtttaac--ttgctccacacatcaagtattttattggtgtg 28279674  T
Q  127 attttt 132  Q
    ||||||    
T  28279675 attttt 28279680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 2232872 - 2232909
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttttc 133  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  2232872 ttgctccacacatcaagtttttattggtgtggtttttc 2232909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 9526743 - 9526779
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttttc 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  9526743 ttgctccacacatcaagtt-ttattggtgtgatttttc 9526779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 13433482 - 13433527
Alignment:
Q  46 gcttgtatttataactttcatacactttgttttggttgcttgatta 91  Q
    |||||||||||||||| |||  ||| ||||||||||||||||||||    
T  13433482 gcttgtatttataactgtcacccacgttgttttggttgcttgatta 13433527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 13785159 - 13785123
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  13785159 ttgcttcacacatcaagtttttattggtgtgattttt 13785123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 4e-73; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 152 - 466
Target Start/End: Original strand, 26756496 - 26756812
Alignment:
Q  152 actaaccttagtttcatattgaacactagctttgttaa---ggaactcggctttaagcttctcagtaatagtcaaagcattcatcctttcaacttcacct 248  Q
    ||||||||| ||||||||| | |||||||||||  |||   ||||||| | |||||||||||||||  ||||||||||||||||||| ||||| ||||||    
T  26756496 actaaccttggtttcatat-gtacactagctttactaattaggaactcaggtttaagcttctcagtggtagtcaaagcattcatcctctcaacctcacct 26756594  T
Q  249 tgtaactcagcatcccttagagccacggccttcttcgcctcaacttcagccacctgagccgccttagtccaagccgccttcttcttagccaactcagaat 348  Q
    || |||||||| ||||| || ||||| || ||    |||||||||||||| || ||||||||||||||||||||||| |||||||||| |||||| ||||    
T  26756595 tgcaactcagcttccctaagggccacagctttagcagcctcaacttcagcgacttgagccgccttagtccaagccgctttcttcttagtcaactcggaat 26756694  T
Q  349 tagcctcagccacctcagcctctctctgattctcaaaaaccttcacttcagtcctcactttaattccctccttgtcaccctctccggtcctctgcagtgc 448  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||| ||| ||||||| | |||||||   ||    
T  26756695 tagcctcggccacctcagcctctctcttattctcaaaaaccttcacttcagtcctaactttaatttcttccttctcagcctctccagccctctgcgtcgc 26756794  T
Q  449 aataacttttgtctctgc 466  Q
    ||| ||||| ||||||||    
T  26756795 aatgactttcgtctctgc 26756812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 28283196 - 28283062
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28283196 tgtgttcttctcgccgttgttttctacttttggcttgtatttatttttttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 28283097  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||    
T  28283096 tgttattggtgtgatttttcatcgaattcgcaaca 28283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 24873176 - 24873039
Alignment:
Q  13 ctgtgttcttctcgccgttgttttctac-ttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatca 110  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  24873176 ctgtgttcttctcgccgttgttttctaccttttggcttgtatttataactttcatacactttgtttttggttgcttaattatcccttgctccacacatca 24873077  T
Q  111 agttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||| |||||    
T  24873076 agttgttattggtgtgatttttcatcgaattcacaaca 24873039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 43082335 - 43082451
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43082335 tgttcttctcgacgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttaattatcccttgctccacacatcaagttg 43082434  T
Q  116 ttattggtgtgattttt 132  Q
    |||||||||||||||||    
T  43082435 ttattggtgtgattttt 43082451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 3883570 - 3883436
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3883570 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcctttgctccacacatcaagt 3883471  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||| ||||||||||||||||||||||||||    
T  3883470 tgttattgatgtgatttttcatcgaattcgcaaca 3883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 43079964 - 43080080
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  43079964 tgttcttctcgccgttgttttctacttttgacttgtatttataactttcatacactttgttttggttgcttaattatccattgctccacacatcaagttg 43080063  T
Q  116 ttattggtgtgattttt 132  Q
    |||||||||||||||||    
T  43080064 ttattggtgtgattttt 43080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 15809578 - 15809716
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15809578 tgtgttcttctcgccgttgttttctatttttgccttgtatttaattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 15809677  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacataaac 153  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  15809678 tgttattggtgtga-ttttcatcgaattcgcaacagaaac 15809716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 3874353 - 3874487
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  3874353 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttggttatctcttgctccacacatcaagt 3874452  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| ||||||| |||||    
T  3874453 tgttattggtgtgatttttcaacgaattcacaaca 3874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 43530475 - 43530609
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||| ||| |||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43530475 tgtgttcttcttgccattgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 43530574  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||| ||||||||||||    
T  43530575 tgttattggtgtgatttttcattgaattcgcaaca 43530609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 18811067 - 18811202
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||| || |||||||||||||||||||||||||    || ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  18811067 tgtgttcttctcgctgtcgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag 18811166  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||||||    
T  18811167 ttgttattggtgtgatttttcatcgaattcgcaaca 18811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 4424378 - 4424512
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  4424378 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatcccttgctccacacaccaag 4424477  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||||||||||| |||||    
T  4424478 ttgttattggtgtga-ttttcatcgaattcacaaca 4424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 18813241 - 18813376
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||    || ||||||||||| ||||||||||||||||||| ||||||| ||| ||||||    
T  18813241 tgtgttcttctcgccgtcgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctctacatatcaag 18813340  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||||||    
T  18813341 ttgttattggtgtgatttttcatcgaattcgcaaca 18813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 27827345 - 27827479
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||    || ||||||||||||||||||||||||| |||||||||||||||||||||||     
T  27827345 tgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagt 27827444  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  27827445 ttgttattggtgtga-ttttcatcgaattcgcaaca 27827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 22684628 - 22684491
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  22684628 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccataaactttgattttggttgcctgattatcccttgctccacacatcaag 22684529  T
Q  113 ttgttattggtgtgattttt--catcgaattcgcaaca 148  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  22684528 ttgttattggtgtgattttttccatcgaattcgcaaca 22684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 13858452 - 13858341
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  13858452 tgttttctacttttggcttgtgtttataacttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgatt 13858353  T
Q  130 tttcatcgaatt 141  Q
    ||||||||||||    
T  13858352 tttcatcgaatt 13858341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 15073073 - 15073203
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  15073073 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgctccacacatcaagtttgtta 15073172  T
Q  119 ttggtgtgatttttcatcgaattcgcaacat 149  Q
    |||||||||||||||||||||||||||||||    
T  15073173 ttggtgtgatttttcatcgaattcgcaacat 15073203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 27829656 - 27829790
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    || ||||||||||||||||||||||||| |||||||||||||||||||||||     
T  27829656 tgtgttcttctcgccgttgttttctacttttgacttatatttaattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagt 27829755  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  27829756 ttgttattggtgtga-ttttcatcgaattcgcaaca 27829790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 32339669 - 32339803
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    || ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  32339669 tgtgttcttctcgccgttattttctacttttgacttgtatttaattgttccatacactttgattttggttgcttgattatcccttgccccacacatcaag 32339768  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  32339769 ttgttattggtgtga-ttttcatcgaattcgcaaca 32339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 44721203 - 44721318
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||| ||||||||||    || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44721203 tgtgttcttctcgccgttgttttctacttttgacttgtatttaattattccatacactttgttttggttgcttgattatcccttactccacacatcaagt 44721302  T
Q  114 tgttattggtgtgatt 129  Q
    ||||||||||||||||    
T  44721303 tgttattggtgtgatt 44721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 609095 - 609231
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgtttt--ggttgcttgattatcccttgctccacacatcaa 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||    ||||||||||||||||||  ||||||||||||||| |||||||||| ||||||    
T  609095 tgtgttcttcttgccgttgttttctacttttggcttgtatttaattgtttcatacactttgttttttggttgcttgattatctcttgctccacgcatcaa 609194  T
Q  112 gttgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||| || |||||||||||||| ||||||    
T  609195 gttgttattggtgcga-ttttcatcgaattcacaacat 609231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 14808128 - 14808253
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  14808128 cgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatccgttgctccacacatcaagtttgttattggtg 14808227  T
Q  125 tga-tttttcatcgaattcgcaacat 149  Q
    ||| ||||||||||||| ||||||||    
T  14808228 tgattttttcatcgaatgcgcaacat 14808253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 15068343 - 15068472
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||| ||| | |  ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||     
T  15068343 tctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacactttgttttggttgcttgactatcccttgttccacacatcaagtttgttg 15068442  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||    
T  15068443 ttggtgtgatttttcatcgaattcgcaaca 15068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 27106867 - 27106743
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||||| || ||  ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27106867 cgttgttttctacttttgtct-gtgattataacttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtg 27106769  T
Q  127 atttttcatcgaattcgcaacataaa 152  Q
     ||| |||||||||| ||||||||||    
T  27106768 ttttctcatcgaatttgcaacataaa 27106743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 28251539 - 28251409
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| |||||||||||||| ||||||||  |||||| | |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  28251539 tctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttgttttggttgcctgattattccttgctccacacatcaagttgttat 28251440  T
Q  120 tggtgtgat-ttttcatcgaattcgcaacat 149  Q
    ||||||||| |||||||||||||| ||||||    
T  28251439 tggtgtgattttttcatcgaattcacaacat 28251409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 15956323 - 15956443
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||| |  ||||  |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||||    
T  15956323 cgttgttttctactttcgt-ttgtgattataactttcatacactttgttttggttgtttgactatcccttgctccacacatcaagtttgttattgatgtg 15956421  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||||||||||||||| |||||    
T  15956422 atttttcatcgaattcacaaca 15956443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 31162579 - 31162683
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||  ||||||||||||||||||| | |||||||||||    
T  31162579 cgttgttttctacttttggcttgtatttataacttccatacactttgttttggttacttaattattacttgctccacacatcaagtattttattggtgtg 31162678  T
Q  127 atttt 131  Q
    |||||    
T  31162679 atttt 31162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 35872422 - 35872301
Alignment:
Q  30 ttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||||||||| ||||||| |||  |||||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  35872422 ttgttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttacttcacacatcaagtttgttattggtgtg 35872323  T
Q  127 atttttcatcgaattcgcaaca 148  Q
     ||| ||||||||||| |||||    
T  35872322 ttttctcatcgaattcacaaca 35872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 41383025 - 41383154
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||||||||||||| |||||||| ||||||| | |  |||| ||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  41383025 tctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttgttttgattgcttgattatctcttgctccacacatcaagtttgtta 41383124  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||| |||||||||||| ||||||||    
T  41383125 ttggtgtggtttttcatcgaactcgcaaca 41383154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 15185684 - 15185563
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||  || |  ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| ||||    
T  15185684 cgttgttttctacttttgt-ttatgattataacttccatacactttgttttggttgcttgactatcccttactccacacatcaagtttgttattgatgtg 15185586  T
Q  127 atttttcatcgaattcgcaacat 149  Q
    |||||||| ||||||| ||||||    
T  15185585 atttttcaccgaattcacaacat 15185563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 33541372 - 33541255
Alignment:
Q  34 tttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 130  Q
    |||||||||||||||||| ||||||| | |  |||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  33541372 tttctacttttggcttgtgtttataattgttccatacactttattttgattgcttgattatcccttactccacacatcaagtttgttattggtgtgattt 33541273  T
Q  131 ttcatcgaattcgcaaca 148  Q
    || ||||||||| |||||    
T  33541272 ttgatcgaattcacaaca 33541255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 14477652 - 14477740
Alignment:
Q  61 tttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  14477652 tttcatacactttgttttggttgtctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 14477740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 25952891 - 25953010
Alignment:
Q  32 gttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||| |||| ||||||| |  |||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |    
T  25952891 gttttctacttttggattgtgtttataattgcttcatacactttattttggttgcttgattatcactttctccacacatcaagtttgttattggtgtgtt 25952990  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    || ||||||||||| |||||    
T  25952991 ttctcatcgaattcacaaca 25953010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 2468099 - 2467979
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||| |||||  ||||  ||||||||| | ||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||    
T  2468099 cgttgttttctaattttgttttgtgattataacttccctacactttgttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtg 2468000  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    | |||||||||||||| |||||    
T  2467999 a-ttttcatcgaattcacaaca 2467979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 30480468 - 30480352
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    ||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||| |||| ||||||||||| || ||||||||||||| |    
T  30480468 tgttttctacttttggcttgtatttataattgttccatacactttgttttggttgcttgattattccttactccacacatcaaatttgttattggtgtca 30480369  T
Q  128 tttt-tcatcgaattcg 143  Q
    |||| |||| |||||||    
T  30480368 ttttctcattgaattcg 30480352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 21482679 - 21482801
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgtttt--ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||||||  ||||  ||||||||| |||||||||| ||||  |||||||| |||||| |||||||||||||||||| || ||||||||||||    
T  21482679 tgttttctacttttgt-ttgtgattataacttccatacactttattttttggttgcttcattatcacttgctccacacatcaagtttattattggtgtga 21482777  T
Q  128 tttttcatcgaattcgcaacataa 151  Q
    ||||||||||||||| ||||||||    
T  21482778 tttttcatcgaattcacaacataa 21482801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 36865906 - 36866012
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||| | ||||||| | |  |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||    
T  36865906 cgttgttttctacttttggcttttgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttgttattgatg 36866005  T
Q  125 tgatttt 131  Q
    || ||||    
T  36866006 tggtttt 36866012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 37214232 - 37214109
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact-ttc-atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| ||||| ||| ||||| |||||||| ||||||||||||    
T  37214232 cgttgttttctacttttggcttgtgtttataattgttctatacactttgttttggttgcttgcttatctcttactccatacatcaagtttgttattggtg 37214133  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    || ||| ||||| ||||| |||||    
T  37214132 tgttttctcatcaaattcacaaca 37214109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 14419155 - 14419035
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||| ||||| ||||||| | |  ||||||||||||||||||| | |||||||| ||||||||| |||||||| ||||||||||||||     
T  14419155 tgttttctacttttgacttgtgtttataattgttccatacactttgttttggtttcctgattatcacttgctccatacatcaagtttgttattggtgtgt 14419056  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| ||||||||||| |||||    
T  14419055 tttctcatcgaattcacaaca 14419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 3005586 - 3005485
Alignment:
Q  47 cttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgca 145  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||||| | |||||||||||| |||||||||||||| ||    
T  3005586 cttgtatttataacttccatacactttg-tttggttgtttgattattacttgctccacacatcaagtattttattggtgtga-ttttcatcgaattcaca 3005489  T
Q  146 acat 149  Q
    ||||    
T  3005488 acat 3005485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 41385107 - 41385233
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacacttt-gttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||||||| |||||||||||||| ||||||| | |  |||||||||| |||||||||| ||||||||||||||||||||    |||| |||||    
T  41385107 tctcgctgttgttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattatcccttgctccac----caagtttgtt 41385202  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    ||| |||||||||||||| ||||||||||||    
T  41385203 atttgtgtgatttttcatggaattcgcaaca 41385233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 27911446 - 27911567
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact-ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||||||||||| ||||||| | |||  |||||||||||| ||| | | |||||| |||||||||||||||||| || ||||||||||    
T  27911446 cgttgttttctacttttggcttgtgtttataattgttccaacactttgttttagtttc-taattatcacttgctccacacatcaagttttttattggtgt 27911544  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    ||||||||| | ||||| |||||    
T  27911545 gatttttcaacaaattcacaaca 27911567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 27957865 - 27957986
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact-ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||||||||||| ||||||| | |||  |||||||||||| ||| | | |||||| |||||||||||||||||| || ||||||||||    
T  27957865 cgttgttttctacttttggcttgtgtttataattgttccaacactttgttttagtttc-taattatcacttgctccacacatcaagttttttattggtgt 27957963  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    ||||||||| | ||||| |||||    
T  27957964 gatttttcaacaaattcacaaca 27957986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 21480868 - 21480990
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgtttt--ggttgcttgattatcccttgctccacacatcaagttg-ttattggtg 124  Q
    ||||||||||| ||||||  ||||  ||||||||| |||||||||||||||  ||||| |||||| || ||| ||||||||||||||||  |||||||||    
T  21480868 cgttgttttcttcttttgt-ttgtgattataacttccatacactttgttttttggttgtttgattgtcacttactccacacatcaagtttattattggtg 21480966  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    | |||||||||||||||| |||||    
T  21480967 ttatttttcatcgaattcacaaca 21480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 183246 - 183313
Alignment:
Q  85 ttgattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacataa 151  Q
    |||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||    
T  183246 ttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacataa 183313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 5372148 - 5372042
Alignment:
Q  30 ttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||||||||  ||||||||| |  |||||| |||  |||| ||||||||| ||||| ||||||||||||||||| ||||||||| |||    
T  5372148 ttgttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgt 5372049  T
Q  126 gattttt 132  Q
    |||||||    
T  5372048 gattttt 5372042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 1225567 - 1225626
Alignment:
Q  71 tttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    |||||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  1225567 tttgttttggttgcttgattattccttgttccacacatcaagtatgttattggcgtgatt 1225626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 181844 - 181901
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttg 83  Q
    |||||||||||||||||||||||| |||||||   |||||||||||||||||||||||    
T  181844 cgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 3896188 - 3896248
Alignment:
Q  30 ttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattat 92  Q
    |||||||||| |||  |||||||||||||| | |||| ||| |||||||||||||||||||||    
T  3896188 ttgttttctatttt--gcttgtatttataaatgtcattcaccttgttttggttgcttgattat 3896248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 30423489 - 30423524
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30423489 ttgctccacacatcaagtt-ttattggtgtgattttt 30423524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 9e-68; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 39798334 - 39798468
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39798334 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaaat 39798433  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||    
T  39798434 tgttattggtgtgatttttcatcgaattcgcaaca 39798468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 38960104 - 38959972
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38960104 tgttcttcttgtcgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 38960005  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||    
T  38960004 ttattggtgtgatttttcatcgaattcgcaaca 38959972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 18469313 - 18469448
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  18469313 tgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 18469412  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||| |||||||||||||||||| |||||    
T  18469413 ttgttattggtatgatttttcatcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 18466988 - 18467123
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||     
T  18466988 tgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttgttttgattgcttgattatcccttgctccacacatcaagt 18467087  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||| ||||||||||||||||||||| |||||    
T  18467088 ttgttattagtgtgatttttcatcgaattcacaaca 18467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 27912840 - 27912969
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  27912840 tgtgttcttctcgccgttgttttctacttttagcttgtatttataacttccatacactttgttttggttgcttgattatcccttactccacacatcaagt 27912939  T
Q  113 ttgttattggtgtgatttttcatcgaattc 142  Q
    |||||||||||| |||||||||||||||||    
T  27912940 ttgttattggtgggatttttcatcgaattc 27912969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 38882392 - 38882530
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38882392 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 38882491  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacataaac 153  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  38882492 tgttattggtgtga-ttttcatcgaattcgcaacagaaac 38882530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 2175205 - 2175342
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2175205 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 2175304  T
Q  114 tgttattggtgtga--tttttcatcgaattcgcaacat 149  Q
    ||||||||||||||  ||||| ||||||||| ||||||    
T  2175305 tgttattggtgtgacttttttgatcgaattcacaacat 2175342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 10587119 - 10587254
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||     
T  10587119 tgtgttcttctcgccgttgttttctacttttgacttgtatttataacttccatacactttgttttggttgcttgattat-ccttgctccacacatcaagt 10587217  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaacata 150  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  10587218 ttgttattggtgtga-ttttcatcgaattcacaacata 10587254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 31543040 - 31543153
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  31543040 tgttctcctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgttttggttgcttgattaacccttgctccacacatcaagttg 31543139  T
Q  116 ttattggtgtgatt 129  Q
    ||||||||||||||    
T  31543140 ttattggtgtgatt 31543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 25804328 - 25804463
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25804328 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 25804427  T
Q  114 tgttattggtgtgat-ttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||||||||| |||||||    
T  25804428 tgttattggtgtgatattttcatcgaatacgcaaca 25804463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 27910737 - 27910872
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatc-aag 112  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||     
T  27910737 tgtgttcttctcgccgttgttttatacttttagcttgtatttataacttccatacactttattttggttgattgattatcccttgctccacacatcaaat 27910836  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  27910837 ttgttattggtgtgatttttcatcgaattcacaaca 27910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 34477028 - 34476894
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34477028 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag 34476929  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  34476928 ttgttattggtgtga-ttttcatcgaattcgcaaca 34476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 15552550 - 15552685
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||||||    
T  15552550 tgtgttcttctcgccattattttctacttttagcttgtatttataactttcatacactttgttttagttgcttgattatcccttacttcacgcatcaagt 15552649  T
Q  114 tgttattggtgtga-tttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||||||| |||||    
T  15552650 tgttattggtgtgattttttcatcgaattcacaaca 15552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 4410326 - 4410458
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  4410326 tgtgctcttttcgccgctgttttctacttttggcttgtatttataacttccatacacctt-ttttggttgcttgattatcccttgctccacacatcaagt 4410424  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||| |||||||||||||    
T  4410425 tgttattggtgtga-ttttcaacgaattcgcaaca 4410458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 21684427 - 21684294
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    || |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21684427 tgtgttcttctctccgttgttttctacttttggcttttatttaattgttccatacactttgttttgattgcttgattatcccttgctccacacatcaagt 21684328  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||||||||||||    
T  21684327 tgttattggtgtga-ttttcatcgaattcgcaaca 21684294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 10529073 - 10528928
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||||| ||||||||||||||| |||||||||||    
T  10529073 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatcccttgcttcacacatcaag 10528974  T
Q  113 ttgttattggtgtgatttt-tcatcgaattcgcaacataaactaac 157  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  10528973 ttgttattggtgtgattttctcatcgaattcacaacataaagtaac 10528928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 3373107 - 3372976
Alignment:
Q  19 tcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgtt 117  Q
    ||||||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  3373107 tcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgtt 3373008  T
Q  118 attggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||||||||||||| ||||||    
T  3373007 attggtgtgatttttcatcgaattcacaacat 3372976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 25921448 - 25921333
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25921448 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttattttggttgcttgattatcccttgctccacacatcaagt 25921349  T
Q  114 tgttattggtgtgatt 129  Q
    ||||||||||||||||    
T  25921348 tgttattggtgtgatt 25921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 31179348 - 31179213
Alignment:
Q  14 tgtgttcttctcgccgttgtt-ttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    || ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  31179348 tgtgttcttctcgccgttgttcttctacttttggcttgtgtttaattattccatacactttgttttggttgcttaattatcccttgctccatacatcaag 31179249  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  31179248 ttgttattggtgtgatttttcatcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 34479393 - 34479259
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||    || ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34479393 tgtgttcttctcgccgttgttttctacttttggcttgcatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag 34479294  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||||| |||||||||||    
T  34479293 ttgttattggtgtga-ttttcatcaaattcgcaaca 34479259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 31545389 - 31545502
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||| ||||| |||||||||||||||||    
T  31545389 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttattttaattgcttgattaacccttactccacacatcaagttg 31545488  T
Q  116 ttattggtgtgatt 129  Q
    ||||||||||||||    
T  31545489 ttattggtgtgatt 31545502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 4236932 - 4237065
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  4236932 tgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgcttcacacatcaagt 4237031  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||| ||||||| |||||    
T  4237032 tgttattggtgtga-ttttcaacgaattcacaaca 4237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 10750005 - 10750137
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  10750005 tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 10750104  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||| ||||||||| |||||    
T  10750105 gttattggtgtga-ttttgatcgaattcacaaca 10750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 10757481 - 10757613
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  10757481 tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 10757580  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||| ||||||||| |||||    
T  10757581 gttattggtgtga-ttttgatcgaattcacaaca 10757613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 41585703 - 41585580
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  41585703 cgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgccccacacatcaagtttgttattggtg 41585604  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||| |||||    
T  41585603 tgatttttcatcgaattcacaaca 41585580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 18511185 - 18511056
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||||||||||||||| |||||| ||||||| |  ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  18511185 tctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttgttttagttgcttgactatcccttgctccacacatcaagtttgtta 18511086  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    ||| |||||||| |||||||||||||||||    
T  18511085 ttgatgtgatttatcatcgaattcgcaaca 18511056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 28 - 142
Target Start/End: Original strand, 21289070 - 21289187
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||| |  ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  21289070 cgttgttttctacttttggcttgtgtttattattcttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgatattggtg 21289169  T
Q  125 tgatttttcatcgaattc 142  Q
    ||||||||||||||||||    
T  21289170 tgatttttcatcgaattc 21289187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 36402300 - 36402170
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact-ttc-atacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gtt 117  Q
    |||||| |||||||||||||||| |||||| ||||||| | ||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  36402300 tctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 36402201  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||    
T  36402200 attggtgtgatttttcatcgaattcgcaaca 36402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 2724207 - 2724328
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  2724207 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctatacacatcaagtttgttattggtgtga 2724306  T
Q  128 -tttttcatcgaattcgcaaca 148  Q
     ||||||||| |||||||||||    
T  2724307 ttttttcatcaaattcgcaaca 2724328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 6756806 - 6756926
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||||| |  |||||||||||||||||| |||| |||||||| ||||||||||||||||||  ||||||||||||||    
T  6756806 tgttttctacttttggcttgtgtttataattgtttcatacactttgttttgattgcctgattatcacttgctccacacatcaagttttgttattggtgtg 6756905  T
Q  127 atttttcatcgaattcgcaac 147  Q
     ||| ||||||||||||||||    
T  6756906 ttttctcatcgaattcgcaac 6756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 40221843 - 40221956
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  40221843 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgctccacacatcaagtttgttattggtgtga 40221942  T
Q  128 tttttcatcgaatt 141  Q
    ||||||||| ||||    
T  40221943 tttttcatcaaatt 40221956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 16776466 - 16776580
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||||||||||||||||||||||||| |||| |  |||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||    
T  16776466 tctcgctgttgttttctacttttggcttgtatt-ataattgtttcatacactttgttttgattgcctgattattccttgctccacacatcaagtttgtta 16776564  T
Q  119 ttggtgtgatttttca 134  Q
    ||||||||||||||||    
T  16776565 ttggtgtgatttttca 16776580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 17818455 - 17818340
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||     
T  17818455 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgg 17818356  T
Q  128 tttt-tcatcgaattc 142  Q
    |||| |||||||||||    
T  17818355 ttttctcatcgaattc 17818340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 26098251 - 26098129
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  26098251 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgatattggtgtga 26098152  T
Q  128 --tttttcatcgaattcgcaaca 148  Q
      ||| |||||||||||||||||    
T  26098151 gttttctcatcgaattcgcaaca 26098129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 15354548 - 15354414
Alignment:
Q  16 tgttcttctcgccgttgtttt-ctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||| | |||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  15354548 tgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag 15354450  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||| |||||    
T  15354449 ttgttattggtgtgatttttcgtcgaattcacaaca 15354414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 15356824 - 15356690
Alignment:
Q  16 tgttcttctcgccgttgtttt-ctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||| | |||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  15356824 tgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag 15356726  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||| |||||    
T  15356725 ttgttattggtgtgatttttcgtcgaattcacaaca 15356690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 36208884 - 36209007
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact-ttc-atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||||  |||||| | ||| ||||||||||||||||||||||||||||| ||||||| |||||||||| || |||||| ||    
T  36208884 cgttgttttctacttttggcttgtgattataattgttctatacactttgttttggttgcttgattatcacttgctctacacatcaagtttattattgatg 36208983  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||| |||||    
T  36208984 tgatttttcatcgaattcacaaca 36209007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 23665368 - 23665484
Alignment:
Q  33 ttttctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattt 130  Q
    |||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23665368 ttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgattt 23665466  T
Q  131 ttcatcgaattcgcaaca 148  Q
    ||| |||||||| |||||    
T  23665467 ttcgtcgaattcacaaca 23665484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 23741813 - 23741697
Alignment:
Q  33 ttttctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattt 130  Q
    |||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23741813 ttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgattt 23741715  T
Q  131 ttcatcgaattcgcaaca 148  Q
    ||| |||||||| |||||    
T  23741714 ttcgtcgaattcacaaca 23741697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 23793219 - 23793103
Alignment:
Q  33 ttttctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattt 130  Q
    |||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23793219 ttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgattt 23793121  T
Q  131 ttcatcgaattcgcaaca 148  Q
    ||| |||||||| |||||    
T  23793120 ttcgtcgaattcacaaca 23793103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 34530679 - 34530559
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||| |||||||||| ||||| ||||||| | |  ||||| |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  34530679 tgttgtctacttttgacttgtgtttataattgttccatacgctttgttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtga 34530580  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||    
T  34530579 tttttcatcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 21948348 - 21948469
Alignment:
Q  33 ttttctacttttggcttgtatttataacttt--catacactttgtttt--ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||| ||||||| | |  |||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  21948348 ttttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgt 21948447  T
Q  128 tttttcatcgaattcgcaacat 149  Q
    ||| ||||||||||||| ||||    
T  21948448 tttctcatcgaattcgccacat 21948469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 39854791 - 39854921
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgtttt-ggttgcttgattatcccttgctccacacatcaagttg-tt 117  Q
    |||||| |||||||| |||||||||||||| ||||||| | |  |||||||||| |||| |||||||| | |||||||||||||||| ||||||||  ||    
T  39854791 tctcgctgttgttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttgctccacatatcaagtttatt 39854890  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||    
T  39854891 attggtgtgatttttcatcgaattcgcaaca 39854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 12555881 - 12555757
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    ||||||||||||||||||||||||  |||||| |  |||||||||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  12555881 cgttgttttctacttttggcttgtgattataattgtttcatacactttattttggttgcttgattattccttgctccacacatcaaatttgttattggtg 12555782  T
Q  125 tga--tttttcatcgaattcgcaac 147  Q
    |||  ||| ||||||||||| ||||    
T  12555781 tgagttttctcatcgaattcacaac 12555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 31465954 - 31465833
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtg 126  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||||| ||||| ||||| |||||||||||| || ||||||||||||    
T  31465954 tgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccacacatcaaatttgttattggtgtg 31465855  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||||||||| |||||||||||    
T  31465854 atttttcatcaaattcgcaaca 31465833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 20054151 - 20054266
Alignment:
Q  32 gttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattt 130  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| | ||||| |||||||||    
T  20054151 gttttctacttttgt-ttgtgtttataactttcatacactttgttttggttgcttgattattacttgctctacacatcaagtattttattagtgtgattt 20054249  T
Q  131 ttcatcgaattcgcaaca 148  Q
    || ||||||||| |||||    
T  20054250 tt-atcgaattcacaaca 20054266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 6661156 - 6661038
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||| | | | |||||||||    
T  6661156 cgttgttttctacttttg-cttgtgtttataacttccatacactttattttggttgcttgattattacttgctccacacatcaaatatttaattggtgtg 6661058  T
Q  127 atttttcatcgaattcgcaac 147  Q
    | |||||||||||||| ||||    
T  6661057 a-ttttcatcgaattcacaac 6661038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 2818307 - 2818186
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||||||||| |||||| ||| |||||||||||||||||| |||||||| |||||    
T  2818307 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatcccttgctccatacatcaagtttgtt 2818208  T
Q  118 attggtgtgatttttcatcgaat 140  Q
    ||||||||| |||||||||||||    
T  2818207 attggtgtg-tttttcatcgaat 2818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 6745375 - 6745507
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgtttt---ggttgcttgattatcccttgctccacacatcaag-ttg 115  Q
    |||||| ||||||||| ||||||||||||| ||||||| | |  |||||||||||||||   || ||||||| |||| |||||||||||||||||| |||    
T  6745375 tctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctcttgctccacacatcaagtttg 6745474  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||| ||| |||||||||||||||||    
T  6745475 ttattggtgtgttttctcatcgaattcgcaaca 6745507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 6747611 - 6747743
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgt---tttggttgcttgattatcccttgctccacacatcaag-ttg 115  Q
    |||||| ||||||||| ||||||||||||| ||||||| | |  ||||||||||||   |||||||||||||||||| ||||||| |||||||||| |||    
T  6747611 tctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctcttgctctacacatcaagtttg 6747710  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||| ||| ||||| |||||||||||    
T  6747711 ttattggtgtgttttctcatccaattcgcaaca 6747743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 18509291 - 18509201
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatca 110  Q
    |||||| ||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||| |||| |||||||||||||||||||||    
T  18509291 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 1189571 - 1189453
Alignment:
Q  32 gttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    |||||||||||||||||||| ||||||| | |  |||||| ||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||      
T  1189571 gttttctacttttggcttgtgtttataattgttccatacattttgttttggtggcttgattattccttgctccacacatcaagtttgatattggtgtg-- 1189474  T
Q  129 ttttcatcgaattcgcaacat 149  Q
    |||||||||||||| ||||||    
T  1189473 ttttcatcgaattcacaacat 1189453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 37705747 - 37705626
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||| ||| | |  |||| ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||     
T  37705747 tgttttctacttttggcttgtgtttttaattattccatatactttgttttggttgcttggttattccttgctccacacatcaagtttgttattggtgtgg 37705648  T
Q  128 tttt-tcatcgaattcgcaaca 148  Q
    |||| ||||||||||| |||||    
T  37705647 ttttctcatcgaattcacaaca 37705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 658323 - 658204
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    ||||||||||||||||||| | ||||| | | |  | ||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||||    
T  658323 tgttttctacttttggcttatgtttattattgttccgtacactttgttttggttgcctgattattccttgctccacacatcaaatttgttattggtgtga 658224  T
Q  128 tttttcatcgaattcgcaaca 148  Q
     ||||||||||||||||||||    
T  658223 -ttttcatcgaattcgcaaca 658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 18596959 - 18597079
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtga 127  Q
    ||||||||||||||| ||||| ||||||| | |  |||||||||| |||||| ||  |||||||| ||||||||| |||||||||| |||||||||||||    
T  18596959 tgttttctacttttgacttgtgtttataattgttccatacactttattttggatgtctgattatcacttgctccatacatcaagtttgttattggtgtga 18597058  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||    
T  18597059 tttttcatcgaatttgcaaca 18597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 24127167 - 24127291
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttg-gttgcttgattatcccttgctccacacatcaagtt-gttattggt 123  Q
    |||||||||||||||||| ||| | ||||||| |  |||||||||||||||||  ||||  ||||||||||||||||||||||| ||||| |||||| ||    
T  24127167 cgttgttttctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcccttgctccacacattaagtttgttatttgt 24127266  T
Q  124 gtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||| |||||    
T  24127267 gtgatttttcatcgaattcacaaca 24127291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 10474285 - 10474176
Alignment:
Q  34 tttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 130  Q
    ||||||||||| |||||| ||||||| | |  ||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||||| ||| ||||    
T  10474285 tttctacttttcgcttgtgtttataattgttccatacactttgttttggttacttgattattccttgctccacacatcaagtttattattgatgtaattt 10474186  T
Q  131 ttcatcgaat 140  Q
    ||||||||||    
T  10474185 ttcatcgaat 10474176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 20045297 - 20045395
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||| |||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||    
T  20045297 cgttgttttttacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcatttgcttcacacatcaagtttgttattggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 26098045 - 26098127
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||||| || ||||||| | |  ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26098045 tgttttctacttttggctagtgtttataattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 696187 - 696310
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgttttggttg-cttgattatcccttgctccacacatcaagt-tgttattggtg 124  Q
    |||||||||||||||||  |||| ||||||||| |  |||||||||| ||||||||  |||||||||| ||||||||||||||||||| ||||||||||     
T  696187 gttgttttctacttttgt-ttgtgtttataactgttccatacactttattttggttttcttgattatctcttgctccacacatcaagtctgttattggta 696285  T
Q  125 tgatttt-tcatcgaattcgcaaca 148  Q
    ||||||| ||||||||||| |||||    
T  696286 tgattttctcatcgaattcacaaca 696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 20505813 - 20505687
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttg---ttttggttgcttgattatcccttgctccacacatcaag-ttgttattg 121  Q
    |||||||||||| ||||||||||| ||||||| | |  |||||||||||   |||||||||| |||||||  |||||||||||||||||| |||||||||    
T  20505813 cgttgttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtttgttattg 20505714  T
Q  122 gtgtgatttttcatcgaattcgcaaca 148  Q
    ||||| ||| |||| |||||| |||||    
T  20505713 gtgtgttttctcattgaattcacaaca 20505687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 17073192 - 17073283
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||| ||||||||||||||||| ||||| ||||||| | |  ||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  17073192 tctcgctgttgttttctacttttgacttgtgtttataattgttccatacactttgttttagttgcttgatcatcacttgctccacacatcaa 17073283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 25904417 - 25904536
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    |||||||||||||||| |||| ||||||| | |  |||||||||||||||  |||||||| |||||||||| ||||||||||| ||  |  ||||||| |    
T  25904417 tgttttctacttttggtttgtgtttataattgttccatacactttgttttcattgcttgactatcccttgcaccacacatcaaatttattatggtgtgtt 25904516  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    || |||||||||||||||||    
T  25904517 ttctcatcgaattcgcaaca 25904536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 20043303 - 20043416
Alignment:
Q  31 tgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttga-ttatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| |||||||   || ||||||||||||||||| ||||||| ||||| ||||||||||| |||||| ||||||||| ||||    
T  20043303 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggctgcttgatttatcacttgctccacaaatcaagtttgttattgatgtg 20043402  T
Q  127 atttttcatcgaat 140  Q
     ||| |||| ||||    
T  20043403 ttttctcattgaat 20043416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 2954728 - 2954843
Alignment:
Q  31 tgttttctacttttggcttgtattt-ataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||  |||| | |  ||||||||||||||||||||  |||||||| ||| ||||||||||| || ||||||||||||||    
T  2954728 tgttttctacttttggcttgtgttacataattgttccatacactttgttttggttgtctgattatcacttactccacacatcaaatttgttattggtgtg 2954827  T
Q  127 atttttcatcgaattc 142  Q
     ||| |||||||||||    
T  2954828 ttttctcatcgaattc 2954843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 31472577 - 31472458
Alignment:
Q  30 ttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-a 127  Q
    |||||||||| |||||| ||||| |||||||| | |  ||||| || |||||||||||| |||| ||| || ||||||||||| ||||||| |||||| |    
T  31472577 ttgttttctaattttggtttgtaattataactgttacccactt-gtattggttgcttgagtatctcttacttcacacatcaagtttgttatcggtgtgta 31472479  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||    
T  31472478 tttttcatcgaattcgcaaca 31472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 16092164 - 16092045
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||  |||| || | |  |||| ||||||||| |||||||||| ||||| |||||||||| |||||| |||||||||||| |     
T  16092164 tgttttctacttttggcttgcgtttacaattgttccatatactttgttt-ggttgcttgactatccattgctccacatatcaagtttgttattggtgcgt 16092066  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| ||||||||||| |||||    
T  16092065 tttctcatcgaattcacaaca 16092045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 15445234 - 15445135
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    |||||||||  ||| |||||| ||||||| |||||| ||| |||||||| ||||||||||||   |||||||||||||||||| | ||||||||||| ||    
T  15445234 tgttttctatcttttgcttgtgtttataattttcatccacgttgttttgattgcttgattat--tttgctccacacatcaagtattttattggtgtgttt 15445137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 9020531 - 9020650
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||| ||||||||||||| ||||| ||||||||||  ||||||||| ||| ||||||||||||||   |||||||||| ||||| | | ||||| |||||    
T  9020531 cgttattttctacttttg-cttgtgtttataacttcaatacactttattt-ggttgcttgattattaattgctccacagatcaaatattttattcgtgtg 9020628  T
Q  127 atttttcatcgaattcgcaacat 149  Q
    | ||||||| |||||| ||||||    
T  9020629 a-ttttcattgaattcacaacat 9020650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 23667624 - 23667760
Alignment:
Q  16 tgttcttctcgccgttgtt--ttctacttttggcttgtatttataactttcatacactttgt-tttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||| | ||||||  |||||||||||||| |||||||    || ||||| |||||  ||||||||||| | ||||||| || ||||||||||||    
T  23667624 tgttcttctcacagttgttctttctacttttggctcgtatttaatcattccatacgctttgagtttggttgcttaactatccctcgccccacacatcaag 23667723  T
Q  113 ttgttattggtg-tgatttttcatcgaattcgcaaca 148  Q
    |||| ||||| | |||||||||| | ||||| |||||    
T  23667724 ttgtgattggagttgatttttcaaccaattcacaaca 23667760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 39397970 - 39397857
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcc-cttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||  ||||||| |  ||||||||||||||||||||||        ||| |||||||||||| ||||| |||| |||||||||    
T  39397970 tgttttctacttttggcttgagtttataattgtttcatacactttgttttggttg--------tccacttgctccacacgtcaagtttgtaattggtgtg 39397879  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||| || |||||||| |||||    
T  39397878 atttctcgtcgaattcacaaca 39397857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 1171089 - 1171143
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcgcaacat 149  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||| ||||||    
T  1171089 ttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaacat 1171143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 42771089 - 42771167
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||| |||| ||||| |||||||||| |||||| ||   ||||||| |||||||||  ||||||||||||||||||    
T  42771089 tgttttctacctttg-cttgtgtttataacttccatacattta--tttggttacttgattattacttgctccacacatcaag 42771167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 4e-67; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 9027166 - 9027033
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9027166 tgttcttctagccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 9027067  T
Q  116 ttattggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||||||||||||||||||||||    
T  9027066 ttattggtgtgatttttcatcgaattcgcaacat 9027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 7351626 - 7351491
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  7351626 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttaattatcccttactccacacatcaagt 7351527  T
Q  114 tgttattggtgtgat-ttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||||||||||| |||||    
T  7351526 tgttattggtgtgattttttcatcgaattcacaaca 7351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 11759441 - 11759575
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11759441 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 11759540  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||    
T  11759541 tgttattggtgtgatttttcatcgaattcgcaaca 11759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 38394300 - 38394434
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38394300 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 38394399  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||| |||||    
T  38394400 tgttattggtgtgatttttcatcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 7471955 - 7471821
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7471955 tgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 7471856  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||| ||||||||||||    
T  7471855 tgttattggtgtgatttttcattgaattcgcaaca 7471821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 20297676 - 20297810
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20297676 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 20297775  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||| |||||    
T  20297776 tgttattggtgtgatttttcatcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 28487867 - 28488000
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28487867 tgtgttcttctagccgttgttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 28487966  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaac 147  Q
    ||||||||||||||||||||||||||||||||||    
T  28487967 tgttattggtgtgatttttcatcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 44878 - 45012
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||||||||||||||| |||||||||||    || ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44878 tgtgttcttctcgccgttgttttctactttttgcttgtatttaattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagt 44977  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||| |||||||||||||||||    
T  44978 tgttattggtgtgatttctcatcgaattcgcaaca 45012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 20626355 - 20626481
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattg 121  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  20626355 tctcgctgttgttttctacttttggcttatatttataacttccatacactttattttggttgcttgattatctcttgctccacacatcaggttgttattg 20626454  T
Q  122 gtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||    
T  20626455 gtgtgatttttcatcgaattcgcaaca 20626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 20630246 - 20630372
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattg 121  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  20630246 tctcgctgttgttttctacttttggcttatatttataacttccatacactttattttggttgcttgattatctcttgctccacacatcaggttgttattg 20630345  T
Q  122 gtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||    
T  20630346 gtgtgatttttcatcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 20642665 - 20642791
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattg 121  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  20642665 tctcgctgttgttttctacttttggcttatatttataacttccatacactttattttggttgcttgattatctcttgctccacacatcaggttgttattg 20642764  T
Q  122 gtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||    
T  20642765 gtgtgatttttcatcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 40836716 - 40836583
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40836716 tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgtttgattatcccttgctccacacatcaagttg 40836617  T
Q  116 ttattggtgtgatttttc-atcgaattcgcaaca 148  Q
    |||||||||||||||||| |||||||||||||||    
T  40836616 ttattggtgtgatttttcgatcgaattcgcaaca 40836583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 1606695 - 1606827
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  1606695 tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgttttggttgcttaattatcccttgctccacacatcaagttg 1606794  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||| |||||    
T  1606795 ttattggtgtgatttttcatcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 7349248 - 7349117
Alignment:
Q  17 gttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgt 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  7349248 gttcttctcgccgttgtttt-tacttttggcttgtatttataactttcatacactttattttggttgcttaattatcccttactccacacatcaagttgt 7349150  T
Q  117 tattggtgtgat-ttttcatcgaattcgcaaca 148  Q
    |||||||||||| |||||||||||||| |||||    
T  7349149 tattggtgtgattttttcatcgaattcacaaca 7349117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 48457967 - 48458101
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||| ||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48457967 tgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 48458066  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    |||||||||||||| |||||||||||||||||||||    
T  48458067 tgttattggtgtga-ttttcatcgaattcgcaacat 48458101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 20299774 - 20299908
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||| ||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20299774 tgtgttcttctcgcagttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 20299873  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||| ||||| |||||    
T  20299874 tgttattggtgtgatttttcatcaaattcacaaca 20299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 25542842 - 25542976
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||    || |||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  25542842 tgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacattttgttttgattgcttgattatcccttgctccacacatcaagt 25542941  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||| |||||    
T  25542942 tgttattggtgtgatttttcatcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 1850295 - 1850430
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||| || | ||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1850295 tgtgttcttttcactgttgttttctacttttggcttgtatttaattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 1850394  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    |||||||||||||||||   ||||||||||||||||    
T  1850395 tgttattggtgtgatttcaaatcgaattcgcaacat 1850430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 7469997 - 7469864
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||    || ||||||||||||||| ||||||||||||||||| |||||||||||||| |    
T  7469997 tgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttgttttagttgcttgattatccct-gctccacacatcaaat 7469899  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||    
T  7469898 tgttattggtgtgatttttcatcgaattcgcaaca 7469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 28485879 - 28486013
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||  ||||||||||||||||||||||||||||||    || |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  28485879 tgtgttcttctatccgttgttttctacttttggcttgtatttaattgttccatacattttgttttggttgcttgattatcccttgctccacatatcaagt 28485978  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||| |||||    
T  28485979 tgttattggtgtgatttttcatcgaattcacaaca 28486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 3036038 - 3036166
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| ||||||||| ||||||| |    
T  3036038 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccaaacatcaaat 3036137  T
Q  114 tgttattggtgtgatttttcatcgaattc 142  Q
    ||||||||||||||||| |||||||||||    
T  3036138 tgttattggtgtgatttctcatcgaattc 3036166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 35943 - 36066
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35943 tgtgttcttctcgccattgttttctacttttggtttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 36042  T
Q  114 tgttattggtgtgatttttcatcg 137  Q
    ||||||||||||||||| ||||||    
T  36043 tgttattggtgtgatttctcatcg 36066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 1049270 - 1049129
Alignment:
Q  14 tgtgttcttctcgccgttgtttt--ctac--ttttggcttgtatttataactttcatacactttgtttt--ggttgcttgattatcccttgctccacaca 107  Q
    ||||||||||| |||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  1049270 tgtgttcttcttgccgttgttttttctacctttttggcttgtatttataactttcatacactttgttttttggttgcttgattatctcttgctccacaca 1049171  T
Q  108 tcaagttgttattggtgtg-atttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  1049170 tcaagttgttattggtgtgaatttttcttcgaattcgcaaca 1049129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 18345855 - 18345989
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18345855 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagt 18345954  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||| |||||||| |||  || ||||||| |||||    
T  18345955 tgttgttggtgtgttttcacaacgaattcacaaca 18345989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 40946642 - 40946779
Alignment:
Q  14 tgtgttcttctcgccgttgtttt--ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||||| ||||  ||| ||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40946642 tgtgttcttctcgccgtttttttttctatttttggcttgtatttaattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 40946741  T
Q  112 gttgttattggtgtgatttttcatcgaattcgcaacata 150  Q
    |||||||||| ||||| || ||||||||||| |||||||    
T  40946742 gttgttattgatgtga-ttctcatcgaattcacaacata 40946779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 43253492 - 43253358
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||     
T  43253492 tgtgttcttctcgctgttgtttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaaa 43253393  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  43253392 ttgttattggtgtga-ttttcatcgaattcgcaaca 43253358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 1046899 - 1046757
Alignment:
Q  14 tgtgttcttctcgccgttgtttt--ctac--ttttggcttgtatttataactttcat-acactttgtttt--ggttgcttgattatcccttgctccacac 106  Q
    |||||||||||||||||||||||  ||||  |||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||| ||||||||||||    
T  1046899 tgtgttcttctcgccgttgttttttctacctttttggcttgtatttataacttccattacactttgttttttggttgcttgattatctcttgctccacac 1046800  T
Q  107 atcaagttgttattggtgtgat-ttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  1046799 atcaagttgttattggtgtgattttttcttcgaattcgcaaca 1046757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 2935584 - 2935716
Alignment:
Q  16 tgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||    || ||||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  2935584 tgttcttctcgccgttgttttctactttttggcttgtatttaattgttccatacgctttgttttggttgcttaattatcccttgcttcacacatcaagtt 2935683  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||||||||||| |||||    
T  2935684 gttattggtgtga-ttttcatcgaattcacaaca 2935716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 38396948 - 38397084
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-----ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacat 108  Q
    |||||||||||||||||||||||     ||||||||||||||||||||    ||  |||||||||||||||||||||| |||||||||||||||||||||    
T  38396948 tgtgttcttctcgccgttgtttttttttctacttttggcttgtatttaattgttctatacactttgttttggttgctttattatcccttgctccacacat 38397047  T
Q  109 caagttgttattggtgtgatttttcatcgaattcgcaa 146  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  38397048 caagttgttattggtgtga-ttttcatcgaattcgcaa 38397084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 7094435 - 7094301
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||    || || ||||||| |||||||||||||| ||| |||||||||||||||||||     
T  7094435 tgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccacacactttattttggttgcttgactatgccttgctccacacatcaagt 7094336  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  7094335 ttgttattggtgtga-ttttcatcgaattcgcaaca 7094301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 13099446 - 13099317
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||| ||||  |||||||||||||||||||||| ||||||    
T  13099446 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgacgatcccttgctccacacatcaagtttgtta 13099347  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||| |||||    
T  13099346 ttggtgtgatttttcatcgaattcacaaca 13099317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 26295765 - 26295886
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| | ||||||| |||||||||  ||||||||||||    
T  26295765 cgttgttttctacttttggcttgtgtttataattttcatacactttgttttgattgcttgattatcacgtgctccatacatcaagtatttattggtgtga 26295864  T
Q  128 tttttcatcgaattcgcaacat 149  Q
    ||||||||| | ||| ||||||    
T  26295865 tttttcatcaatttcacaacat 26295886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 3878891 - 3879027
Alignment:
Q  14 tgtgttcttctcgccgttg-ttttctacttttggcttgtatttataactttcataca-ctttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    || ||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  3878891 tgtgttcttctcgccgttgtttttctacttttggtttgtatttaattgttccatacatttttgttttggttgcttgattatctcttgctccacacatcaa 3878990  T
Q  112 gttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||| |||||| |||||||| |||||||||||||||||    
T  3878991 gttattattgatgtgatttctcatcgaattcgcaaca 3879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 44724898 - 44725022
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataac---tttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| |||||||    || ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  44724898 cgttgttttctacttttggcttgtgtttataatatgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggt 44724997  T
Q  124 gtgatttttcatcgaattcgcaaca 148  Q
    ||| |||  ||||||||||||||||    
T  44724998 gtgttttcccatcgaattcgcaaca 44725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 42330966 - 42330846
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| ||||    
T  42330966 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtttattattggcgtga 42330867  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| |||||||||||||||||    
T  42330866 tttctcatcgaattcgcaaca 42330846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 7092188 - 7092054
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    ||||||||||||||| |||||||||||||||| ||| ||||||    || || ||||||| |||||||||||||| |||||||||||||||||||||||     
T  7092188 tgtgttcttctcgccattgttttctacttttgacttatatttaattgttccacacactttattttggttgcttgactatcccttgctccacacatcaagt 7092089  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||| ||||||    
T  7092088 ttgttattggtgtga-ttttcatcgaatttgcaaca 7092054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 31435016 - 31434890
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | |  | |||||||| ||||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  31435016 cgttgttttctacttttggcttgtgtttataattgttccttacactttattttgattgcttgattattccttgctccacacatcaagtttgttattggtg 31434917  T
Q  125 tgatttt-tcatcgaattcgcaacata 150  Q
    ||||||| |||||||||||||||||||    
T  31434916 tgattttctcatcgaattcgcaacata 31434890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 4295899 - 4295781
Alignment:
Q  33 ttttctacttttggcttgtatttataact-ttc-atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    ||||||||||||||||||| ||||| | | ||| ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  4295899 ttttctacttttggcttgtgtttattattgttctatacactttgttttggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgatt 4295800  T
Q  130 tttcatcgaattcgcaaca 148  Q
    |||||||||||| ||||||    
T  4295799 tttcatcgaatttgcaaca 4295781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 24465857 - 24465975
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatt 129  Q
    |||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||| || || ||||||||||||||    
T  24465857 tgttttctacttttggtttgtgattataacttccatacactttgttttggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgatt 24465956  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||    
T  24465957 tttcatcgaattcacaaca 24465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 24748914 - 24749035
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||  ||||  ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  24748914 cgttgttttctacttttgt-ttgtgattataacttccatacactttgttttggttgtttgattatcccttgctccacacatcaagtttgttattggtgtg 24749012  T
Q  127 atttt-tcatcgaattcgcaaca 148  Q
     |||| ||||||||||| |||||    
T  24749013 gttttctcatcgaattcacaaca 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 27306205 - 27306076
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||||||||| ||||||||||||  |||||| | |  ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  27306205 tctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttgttttggttgcttgactatcccttgttccacacatcaagtttgtta 27306106  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||| | |||||||||||||||||    
T  27306105 ttggtgtgatctctcatcgaattcgcaaca 27306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 42223479 - 42223600
Alignment:
Q  30 ttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||| ||||| ||||||| |  || ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  42223479 ttgttttctacttttgccttgtgtttataattgttttatacactttattttggttgcttgattatcccttactccacacatcaagtttgttattggtgtg 42223578  T
Q  127 atttttcatcgaattcgcaaca 148  Q
     ||||| |||||||||||||||    
T  42223579 tttttttatcgaattcgcaaca 42223600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 21678386 - 21678506
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  | ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  21678386 tgttttctacttttggcttgtgtttataattgttccttacactttgttttggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtga 21678485  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||    
T  21678486 tttttcatcgaattcacaaca 21678506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 26804833 - 26804955
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 125  Q
    ||||||||||||||||| ||||| ||||||| | |  ||||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||||||    
T  26804833 gttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgctccacacatcaaatttgttattggtgt 26804932  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    ||||| ||||| |||||||||||    
T  26804933 gatttctcatcaaattcgcaaca 26804955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 27832606 - 27832488
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    |||||||||||||||| ||||  ||||||||| ||||||||||||||||||| |||||||||  | |||||||||||| ||| ||||||||||| |||||    
T  27832606 tgttttctacttttggtttgtgattataacttccatacactttgttttggttacttgattatttcctgctccacacattaagtttgttattggtatgatt 27832507  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||    
T  27832506 tttcatcgaattcacaaca 27832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 31155903 - 31155811
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg---ttttggttgcttgattatcccttgctcca 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||| ||| ||||||||||||||||    
T  31155903 tgtgttcttctcgccgtttttttctacttttggcttgtatttataactttcatacactttgtttttttggtttcttaattatcccttgctcca 31155811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 40550161 - 40550277
Alignment:
Q  33 ttttctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattt 130  Q
    |||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40550161 ttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgattt 40550259  T
Q  131 ttcatcgaattcgcaaca 148  Q
    ||| |||||||| |||||    
T  40550260 ttcgtcgaattcacaaca 40550277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 21680349 - 21680472
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | |  ||||||||||||||| ||||| ||||||| ||||||| ||||||||||| ||||||||||||    
T  21680349 cgttgttttctacttttggcttgtgtttataattgttccatacactttgtttttgttgcatgattattccttgcttcacacatcaagcttgttattggtg 21680448  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    ||  |||||||||||||| |||||    
T  21680449 tgggttttcatcgaattcacaaca 21680472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 7188861 - 7188979
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga-t 128  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||| ||||| |    
T  7188861 tgttttctacttttg-cttgtgtttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttattgatgtgatt 7188959  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    |||| ||||||||| |||||    
T  7188960 ttttgatcgaattcacaaca 7188979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 22137393 - 22137527
Alignment:
Q  16 tgttcttctcgccgttgtttt-ctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||| | |||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||| ||||||||||||||||||    
T  22137393 tgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatctcttgctccacacatcaag 22137491  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||| |||||    
T  22137492 ttgttattggtgtgatttttcgtcgaattcacaaca 22137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 22251550 - 22251452
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||||| |  |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  22251550 tgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgattatcccttgctcaacacatcaagtttgttattggtgtg 22251452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 40552420 - 40552554
Alignment:
Q  16 tgttcttctcgccgttgtttt-ctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||| | |||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||| ||||||||||||||||||    
T  40552420 tgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatctcttgctccacacatcaag 40552518  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||| |||||    
T  40552519 ttgttattggtgtgatttttcgtcgaattcacaaca 40552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 443922 - 444044
Alignment:
Q  31 tgttttctacttttggcttgtatttataact-ttca-tacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||||||||||||  |||||| | |||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  443922 tgttttctacttttggcttgtgattataattgttcaatacactttgttttggttgcttgactattccttgctccacacatcaagtttgttattggtgtga 444021  T
Q  128 --tttttcatcgaattcgcaaca 148  Q
      ||| ||||||||||| |||||    
T  444022 gttttctcatcgaattcacaaca 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 22394042 - 22394161
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||| |||| |||| |||||||  ||||||||| || |||||||||      
T  22394042 cgttgttttctacttttggtttgtgattataacttccatacactttgttttggttgtttgactatcacttgctc--cacatcaagtttattattggtgga 22394139  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||||||||||||||| |||||    
T  22394140 atttttcatcgaattcacaaca 22394161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 11355581 - 11355705
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgtttt-ggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    ||||||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||| ||||||| |||||||||||||||| || || |||||||||    
T  11355581 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctccacacatcaaatttattattggtg 11355680  T
Q  125 tga-tttttcatcgaattcgcaaca 148  Q
    ||| ||||||||||||||| |||||    
T  11355681 tgattttttcatcgaattcccaaca 11355705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 37412090 - 37411982
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||| |||||||||||  |||||| | |  ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  37412090 cgttgttttctagttttggcttgtgattataattgttccatacactttgttttggttgcttgattattccttgttccacacatcaagtttgttattggtg 37411991  T
Q  125 tgatttttc 133  Q
    ||| |||||    
T  37411990 tgagttttc 37411982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 9679383 - 9679495
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||||| | |  ||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  9679383 tgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 9679482  T
Q  127 atttttcatcgaa 139  Q
     ||| ||||||||    
T  9679483 ttttctcatcgaa 9679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 6349122 - 6349220
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||||  ||||||||| || ||||||  |||||||||||| ||||    
T  6349122 ttttctacttttg-cttgtgtttataacttccgtacactttgttttggttgcttgattattacttgctccatacgtcaagtatttattggtgtgagtttt 6349220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 39145954 - 39145856
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||||||||||||| |||| ||||||| |  || ||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  39145954 cgttgttttctacttttggtttgtgtttataattgtttaatacaatttgttttggttgcttgattatcacttactccacacatcaagtttgttattggt 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 21592108 - 21591989
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||| |||||||||  |||||||| |||||||||||||||||| ||||||| |  |||     
T  21592108 tgttttctacttttggcttgtgtttataattgttccatacacttt-ttttggttgtctgattatcacttgctccacacatcaagtttgttatagccgtgt 21592010  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| |||||||||||||||||    
T  21592009 tttctcatcgaattcgcaaca 21591989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 31153740 - 31153691
Alignment:
Q  99 ctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31153740 ctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 31153691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 1502883 - 1502816
Alignment:
Q  80 gttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  1502883 gttgcttgattatctcttgctccacacatcaagttgttattggtgtga-ttttcattgaattcacaaca 1502816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 21990474 - 21990560
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||| ||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21990474 tgtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtt 21990560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 9681146 - 9681257
Alignment:
Q  33 ttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||||||| |||||||   || ||||||||||| |||||||||  | |||||| |||| ||||||||||||| |||||||||||||| |    
T  9681146 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtgtt 9681245  T
Q  129 ttttcatcgaat 140  Q
    || |||| ||||    
T  9681246 ttctcattgaat 9681257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 22108401 - 22108484
Alignment:
Q  33 ttttctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  22108401 ttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttg 22108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 25276497 - 25276566
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |  ||| ||||||||||||||||||||||||||||||||| | ||||||| |||||    
T  25276497 ttggttgcttgattaac--ttgatccacacatcaagttgttattggtgtgattttttagcgaattcacaaca 25276566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 20137066 - 20136991
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga-tttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||||||||||||||||| || || ||||| || ||| ||||||||||||||| |||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaaatttattattcgtatgattttttcatcgaattcacaaca 20136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 20091125 - 20091041
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttt-tggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||  ||||| || ||||||| |||||||||||| | |||||||||||||||  ||||||| |||||||||||    
T  20091125 cgttgttttctactttta-cttgtgtt-ataacttccatacactttgtatctggttgcttgattattacttgctcaacacatcaagt 20091041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 24813419 - 24813347
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||||  ||||||||||||||||||| | |||||| ||||| ||||||||||| || ||||||    
T  24813419 ttggttgcttgattattacttgctccacacatcaagtattttattgatgtga-ttttcatcgaactcacaacat 24813347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 16296989 - 16296932
Alignment:
Q  32 gttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgatt 90  Q
    |||||||||||||| ||||| ||||||| | |||  |||||||||||||||||||||||    
T  16296989 gttttctacttttg-cttgtgtttataattgtcagccactttgttttggttgcttgatt 16296932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 12845 - 12715
Alignment:
Q  18 ttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgtt 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12845 ttcttctcgccgttgttgtctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgtt 12746  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||| |||||||||||||||| |||||    
T  12745 attggtgtcatttttcatcgaattcacaaca 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 8e-59; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 2628861 - 2628727
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2628861 tgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttgattttggttgcttgattatcccttgctccacacatcaag 2628762  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  2628761 ttgttattggtgtga-ttttcatcgaattcgcaaca 2628727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 12195489 - 12195354
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  12195489 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgctccacacatcaag 12195390  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  12195389 ttgttattggtgtgatttttcatcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 26932538 - 26932403
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26932538 tgtgttcttctcgccgttgtttttctacctttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 26932439  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||| ||||| |||||    
T  26932438 ttgttattggtgtgatttttcatcaaattcacaaca 26932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 5273189 - 5273055
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5273189 tgttcttctcgccgttgttttctacttttggcttgtatttaaaaattacatacactttgattttggttgcttgattatcccttgctccacacatcaagtt 5273090  T
Q  115 gttattggtgtgat-ttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||||||||||| |||||    
T  5273089 gttattggtgtgattttttcatcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 14507151 - 14507013
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14507151 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 14507052  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacataaac 153  Q
    |||||||||||||| | ||||||||||| |||||| ||||    
T  14507051 tgttattggtgtga-tattcatcgaatttgcaacaaaaac 14507013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 30034578 - 30034447
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  30034578 tgtgttcttctcgccattgttttctacttttagcttgtatttataactttcatacactttg-tttggttgcttgattat-ccttgctccatacatcaagt 30034481  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||||||||||||    
T  30034480 tgttattggtgtga-ttttcatcgaattcgcaaca 30034447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 28241296 - 28241163
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||| |||||||||||||||||||||||||||||||||    || |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  28241296 tgtgttcttttcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttgattgcttgattatctcttgctccacacatcaagt 28241197  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||||||||||| |||||    
T  28241196 tgttattggtgtga-ttttcatcgaattcacaaca 28241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 26066094 - 26065961
Alignment:
Q  16 tgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||| |||||||||||||||| ||||||||||||    || ||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  26066094 tgttcttctcgcagttgttttctactttttggcttgtatttaattgttccatacgctttgttttggttgcttaattatcccttgctccacacatcaagtt 26065995  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||| |||||    
T  26065994 gttattggtgtgatttttcatcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 26068368 - 26068235
Alignment:
Q  16 tgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||| |||||||||||||||| ||||||||||||    || ||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  26068368 tgttcttctcgcagttgttttctactttttggcttgtatttaattgttccatacgctttgttttggttgcttaattatcccttgctccacacatcaagtt 26068269  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||| |||||    
T  26068268 gttattggtgtgatttttcatcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 29754682 - 29754549
Alignment:
Q  16 tgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||| |||||||||||||||| |||| |||||||    || ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29754682 tgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttgttttggttgcttgattatcccttgctccacacatcaagtt 29754583  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||| |||||    
T  29754582 gttattggtgtgatttttcatcgaattcacaaca 29754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 1230224 - 1230090
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggctt-gtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    ||||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  1230224 tgtgttcttctcgccgttgttttatacttttggctttgtatttaattgtttcatacactttattttggttgcttgattatctcttgatccacacatcaag 1230125  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||| |||||||||||||||    
T  1230124 ttgttattggtgtgattttt-atcgaattcgcaaca 1230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 4816206 - 4816087
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4816206 tgtgttcttctcgccgttgtttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag 4816107  T
Q  113 ttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||    
T  4816106 ttgttattggtgtgattttt 4816087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 9020269 - 9020399
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| ||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||  |||||||| |||||||||||||||||| ||||||    
T  9020269 tctcgctgttgttttctacttttggcttgtatttataattgttccatacactttgttttggttgtctgattatctcttgctccacacatcaagtttgtta 9020368  T
Q  119 ttggtgtgatttttcatcgaattcgcaacat 149  Q
    |||||||||||||||||||||||||||||||    
T  9020369 ttggtgtgatttttcatcgaattcgcaacat 9020399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 30967540 - 30967674
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||| ||||||||||    || ||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  30967540 tgtgttcttctcgccgttgttttctacttttgacttgtatttaattattccatgcactttgttttggttacttgattatctcttgctccacacatcaagt 30967639  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    |||||||||||||| |||||| ||||||||||||||    
T  30967640 tgttattggtgtga-ttttcaacgaattcgcaacat 30967674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 11983000 - 11982872
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| |||||||||||||||||||||||  || ||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11983000 tctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagttgttat 11982901  T
Q  120 tggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||| |||||    
T  11982900 tggtgtgatttttcatcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 33309197 - 33309329
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  33309197 tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 33309296  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||||||||||| |||||    
T  33309297 gttattggtgtga-ttttcatcgaattcacaaca 33309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 33311466 - 33311598
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  33311466 tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 33311565  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||||||||||| |||||    
T  33311566 gttattggtgtga-ttttcatcgaattcacaaca 33311598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 14458742 - 14458607
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||    || ||||||||||| |||||||||| ||||||||| || ||||||||||||||    
T  14458742 tgtgttcttctcgtcgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatccattactccacacatcaag 14458643  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
     | |||||||||||||||||||||||||||||||||    
T  14458642 ctattattggtgtgatttttcatcgaattcgcaaca 14458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 19704542 - 19704403
Alignment:
Q  14 tgtgttcttctcgccgttgtttt--ctacttttggcttgtatttataactttcatacactttg--ttttggttgcttgattatcccttgctccacacatc 109  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    || |||||||||||  |||||||||||||||||||||||||||||||||||    
T  19704542 tgtgttcttctcgccgttgttttttctacttttggcttgtatttaattgttccatacactttgatttttggttgcttgattatcccttgctccacacatc 19704443  T
Q  110 aagttgttattggtgtgatttttc-atcgaattcgcaaca 148  Q
    ||||||||||||||||||||| || ||||||||| |||||    
T  19704442 aagttgttattggtgtgatttctcgatcgaattcacaaca 19704403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 18322482 - 18322566
Alignment:
Q  64 catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18322482 catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatagaattcgcaaca 18322566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 20915332 - 20915213
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  20915332 tgtgttcttctcgtcgttgtttttctacttttggcttgtatttaattatttcatacactttgttttggttgcttgattaccccttgccccacacatcaag 20915233  T
Q  113 ttgttattggtgtgattttt 132  Q
    || |||||||||||||||||    
T  20915232 ttattattggtgtgattttt 20915213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 15367380 - 15367498
Alignment:
Q  33 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  15367380 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacatgctccacacatcaagtttgttattggtgtgatt 15367479  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||    
T  15367480 tttcatcgaattcacaaca 15367498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 30728789 - 30728673
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||| ||||||||||||| | |  |||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  30728789 tgttttctacttttgacttgtatttataattgttccatacactttgttttggttgtttgactatcccttgctccacacatcaagtttgttattggtgtga 30728690  T
Q  128 tttttcatcgaattcgc 144  Q
    ||||||| |||||||||    
T  30728689 tttttcaacgaattcgc 30728673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 15346691 - 15346806
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||||||| | |  |||| ||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||    
T  15346691 gttgttttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgattatcacttgttccacacatcaagtttgttattggtgt 15346790  T
Q  126 gatttttcatcgaatt 141  Q
    ||||||||||||||||    
T  15346791 gatttttcatcgaatt 15346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 24338418 - 24338295
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||| |||| ||||||| | |  ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||| ||    
T  24338418 cgttgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgctccacacatcaagtttgttattgatg 24338319  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||| |||||    
T  24338318 tgatttttcatcgaattcacaaca 24338295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 26065320 - 26065457
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||| || ||||||||||||||||||| |||  |||||||| |  ||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  26065320 tgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag 26065419  T
Q  113 ttgttattggtgtgatttt--tcatcgaattcgcaaca 148  Q
    |||||||||||||||||||  ||||||||||| |||||    
T  26065420 ttgttattggtgtgatttttctcatcgaattcacaaca 26065457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 26085289 - 26085426
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||| || ||||||||||||||||||| |||  |||||||| |  ||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  26085289 tgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag 26085388  T
Q  113 ttgttattggtgtgatttt--tcatcgaattcgcaaca 148  Q
    |||||||||||||||||||  ||||||||||| |||||    
T  26085389 ttgttattggtgtgatttttctcatcgaattcacaaca 26085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 3629835 - 3629711
Alignment:
Q  28 cgttgttttctactttt-ggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||||||||||| ||||||| ||||||| | |  ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  3629835 cgttgttttctactttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcctttgctccacacatcaagtttgttattggt 3629736  T
Q  124 gtgatttttcatcgaattcgcaaca 148  Q
    ||| ||| ||||||||||| |||||    
T  3629735 gtgttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 8717268 - 8717195
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 17012387 - 17012502
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||   |||||||||||||||||| | |||||| |||||||||    
T  17012387 ttttctacttttggcttgtgttt-taacgttcatacactttgttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgatttt 17012485  T
Q  132 tcatcgaattcgcaaca 148  Q
    ||||||||||| |||||    
T  17012486 tcatcgaattcacaaca 17012502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 3631904 - 3631784
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||| | |||||| |||||||||||| ||||| ||||||||||||||     
T  3631904 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcacttgctccacacgtcaagtttgttattggtgtgt 3631805  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||    
T  3631804 tttttcatcgaattcacaaca 3631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 3027822 - 3027703
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||  ||||||||||||||||| |  |||| |||||||    
T  3027822 cgttgttttctacttttgacttgtatttataacttccatacacttt-atttggttgctcgattattacttgctccacacatcaaatatttatcggtgtga 3027724  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||| |||||| |||||    
T  3027723 tttttcattgaattcacaaca 3027703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 3394716 - 3394837
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgtttt-ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||||| || |||||||||||||| || |||||||||||    
T  3394716 tgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagatttttattggtgtg 3394815  T
Q  127 atttttcatcgaattcgcaaca 148  Q
     ||| |||||||||||||||||    
T  3394816 ttttctcatcgaattcgcaaca 3394837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 13057587 - 13057660
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacat 149  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13057587 ttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacat 13057660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 14466665 - 14466785
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttatt 120  Q
    |||||| | |||||||||||||||  ||||  |||||||||||||||| |||||||||||||||||| |||| |||||| |||||||| || || |||||    
T  14466665 tctcgctgctgttttctacttttgt-ttgtgattataactttcatacattttgttttggttgcttgactatcacttgctgcacacatcaaatttattatt 14466763  T
Q  121 ggtgtgatttttcatcgaattc 142  Q
    ||||||||||||||||||||||    
T  14466764 ggtgtgatttttcatcgaattc 14466785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 25480227 - 25480346
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    ||||||||||||||| |||||  |||||| |  |||||||||||| ||||||||||| || |||||||| ||| ||||||||| |  |||||||||||||    
T  25480227 tgttttctacttttgacttgtgattataattgtttcatacactttattttggttgctcgactatcccttactctacacatcaaatatttattggtgtgat 25480326  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||    
T  25480327 ttttcatcgaattcacaaca 25480346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 3233697 - 3233567
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttgctccacacatc-aagttgtt 117  Q
    |||||| |||||||||||||||||| |||| |||||||   |||||| ||||||| |||||||||| |||||||| ||| ||||||||||| || |||||    
T  3233697 tctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcacttactccacacatcaaatttgtt 3233598  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    |||| |||| ||| |||||||||||||||||    
T  3233597 attgatgtgttttctcatcgaattcgcaaca 3233567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 142
Target Start/End: Original strand, 22490959 - 22491073
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||||||| | | ||||||| | | |  ||| ||||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||    
T  22490959 cgttgttttctacttttggcctatgtttataattgttacccac-ttgttttggttgcttgattatccttagctccacacattaagtttgttattggtgtg 22491057  T
Q  127 atttttcatcgaattc 142  Q
    ||||||||||||||||    
T  22491058 atttttcatcgaattc 22491073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 15541067 - 15540990
Alignment:
Q  72 ttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  15541067 ttgttttggtttcttgactatcccttgctccacacatcaagtttgttattggtttgatttttcatcgaagtcgcaaca 15540990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 32280348 - 32280463
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||| | | |  ||| |||| ||||||||||||||||| ||| ||||| |||||||| |||||||| ||||||||||    
T  32280348 ttttctacttttggcttgtatttataattgttacccac-ttgtattggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgatttt 32280446  T
Q  132 tcatcgaattcgcaaca 148  Q
    | ||||||||| |||||    
T  32280447 ttatcgaattcacaaca 32280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 1069683 - 1069563
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    |||||||||||||| |||||| ||||||| | |  |||||||||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| |      
T  1069683 tgttttctactttttgcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgctccatacatcgaatttgttattggtatat 1069584  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| ||||||||||| |||||    
T  1069583 tttctcatcgaattcacaaca 1069563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 13040173 - 13040233
Alignment:
Q  90 tatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  13040173 tatccattgctccacacatcaagtttgttattagtgtgatttttcatcgaattcgcaacat 13040233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 138
Target Start/End: Original strand, 26945493 - 26945600
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    ||||||||||||||||||||| |||||||||| | ||||||||| |||| ||  ||||||||  |||| | |||| ||||||| | ||||||||||||||    
T  26945493 tgttttctacttttggcttgtgtttataacttccttacactttg-tttgattctttgattattacttgtttcacatatcaagtgttttattggtgtgatt 26945591  T
Q  130 tttcatcga 138  Q
    |||||||||    
T  26945592 tttcatcga 26945600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 15530129 - 15530001
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||||||||||| | |  |||||||||   ||||| |||  ||||||| |||| |||||||||||||| ||||||||||||    
T  15530129 gttgttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattccttactccacacatcaagtttgttattggtg 15530030  T
Q  125 tga---tttttcatcgaattcgcaacata 150  Q
    |||   ||| ||||||||||| |||||||    
T  15530029 tgagtttttctcatcgaattcacaacata 15530001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 19696791 - 19696887
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    |||||||||||||  |||| ||||||||| |||  |||||||||| |||||||||||||  | |||||||||||||||||| | ||||||||||||||||    
T  19696791 ttttctacttttgt-ttgtgtttataactgtcacccactttgtttcggttgcttgatta--ctttgctccacacatcaagtattttattggtgtgatttt 19696887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 6610478 - 6610378
Alignment:
Q  29 gttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga 127  Q
    |||||||| |||||||| ||| | ||||||| | | || |||||||||||||||||||||||||   ||||||||||||| |||| | ||||||||||||    
T  6610478 gttgttttatacttttg-cttatgtttataattgttatccactttgttttggttgcttgattat--tttgctccacacattaagtattttattggtgtga 6610382  T
Q  128 tttt 131  Q
    ||||    
T  6610381 tttt 6610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 10584355 - 10584413
Alignment:
Q  92 tcccttgctccacacatcaag-ttgttattggtgtgatttt-tcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||| |||||    
T  10584355 tcccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 10584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 3918747 - 3918841
Alignment:
Q  52 atttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaac 147  Q
    |||||||||| |||  ||| ||||||||||||||||||||    |||||||||| || |||| | ||||||||||||||||||| ||||||| ||||    
T  3918747 atttataactgtcactcacgttgttttggttgcttgatta--atttgctccacaaattaagtattttattggtgtgatttttcaacgaattcacaac 3918841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 16455350 - 16455280
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||  | |||||||||| ||||||| | |||||||| |||||||||||||||||| |||||    
T  16455350 ttggttgcttgatta--ctttgctccacatatcaagtattttattggtttgatttttcatcgaattcacaaca 16455280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 22611069 - 22611138
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||| ||||||||||| ||||||||    
T  22611069 ttggttgcttgattatt--ttgctccacacatcaagtattttattggtgtga-ttttcatcgaactcgcaaca 22611138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 28037630 - 28037574
Alignment:
Q  96 ttgctccacacatcaagt--tgttattggtgtgatttttcatcgaattcgcaacata 150  Q
    ||||||||||||||||||  | ||||||||||||||||||| ||||||| |||||||    
T  28037630 ttgctccacacatcaagtatttttattggtgtgatttttcaacgaattcacaacata 28037574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 25477614 - 25477657
Alignment:
Q  70 ctttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||||||| |||||||| || ||||||||||||    
T  25477614 ctttgttttggttgcttgactatcccttacttcacacatcaagt 25477657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 17694754 - 17694701
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcgcaaca 148  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||| |||||    
T  17694754 ttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaaca 17694701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 22351756 - 22351704
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgattttt-catcgaattcgcaaca 148  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||| |||||    
T  22351756 ttgctccacacatcaagtt-ttattggtgtgatttttacaacgaattcacaaca 22351704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 25465513 - 25465444
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||   |||||||| ||||||||| | |||||||||||||||| |||||||||| |||||    
T  25465513 ttggttgcttgattatt--ttgctccatacatcaagtattttattggtgtgatttt-catcgaattcacaaca 25465444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 28078118 - 28078063
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 132  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  28078118 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 28078063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 8e-59; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 22782712 - 22782577
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  22782712 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgtttttggttgcttaattatcccttgctccacacatcaag 22782613  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| ||||||||||||||    
T  22782612 ttgttattggtgtgatttttcgtcgaattcgcaaca 22782577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 22780347 - 22780212
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  22780347 tgtgttcttctcgccgttgttttctacttttggcttatatttataactttgatacgctttgtttttggttgcttaattatcccttgctccacacatcaag 22780248  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||||||    
T  22780247 ttgttattggtgtgatttttcatcgaattcgcaaca 22780212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 18709138 - 18709002
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18709138 tgtgttcttctcgccgttgttttctactattggcttgtatttataactttcatacactttgttttggttgcttgattatgccttgctccacacatcaagt 18709039  T
Q  114 tgttattggtgt-gatttttcatcgaattcgcaacat 149  Q
    |||||||||||| | ||||||||| ||||| ||||||    
T  18709038 tgttattggtgtggttttttcatcaaattcacaacat 18709002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 26085952 - 26085818
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  26085952 tgtgtttttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgactatcccttgctccacacatcaag 26085853  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| || |||||||||||||||||    
T  26085852 ttgttattggtgtga-ttctcatcgaattcgcaaca 26085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 53405491 - 53405626
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||     
T  53405491 tgtgttcttttcgccgatgttttctacttttggcttgtatttataacttccatacattttgttttggttgcttgattatcccttgctccacacatcaagt 53405590  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    || |||||||||||||||||||||||||||||||||    
T  53405591 ttattattggtgtgatttttcatcgaattcgcaaca 53405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 37089347 - 37089212
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||| |||||||||||||||||     
T  37089347 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagt 37089248  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||||||    
T  37089247 ttgttattggtgtgatttttcatcgaattcgcaaca 37089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 5635451 - 5635318
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5635451 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgattgattatcccttgctccacacatcaagt 5635352  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||||||||||||    
T  5635351 tgttattggtgtga-ttttcatcgaattcgcaaca 5635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 24348559 - 24348692
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||| ||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24348559 tgtgttcttctcgccgttgttttctatttttggcttgtatttagttgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 24348658  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||||||||||||    
T  24348659 tgttattggtgtga-ttttcatcgaattcgcaaca 24348692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 9174121 - 9173987
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9174121 tgtgttcttctcgccgttgtttttctacttttggcttgtatttaattatttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 9174022  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||| |||||| ||||||||||||||||||||    
T  9174021 ttgttattagtgtga-ttttcatcgaattcgcaaca 9173987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 2484848 - 2484715
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2484848 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttattttggttgcttgattatcccttgctccacacatcaagt 2484749  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||||||||||| |||||    
T  2484748 tgttattggtgtga-ttttcatcgaattcacaaca 2484715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 6765203 - 6765335
Alignment:
Q  15 gtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-t 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  6765203 gtgttcttctcgccgttgttttctacttt-ggcttgtatttataa-ttccatacactttgttttggttgcttgattatcccttactccacacatcaagtt 6765300  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||| |||||    
T  6765301 tgttattggtgtgatttttcatcgaattcacaaca 6765335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 22044364 - 22044247
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22044364 tgttcttctcgccgttgttttctacttttggcttgtatttaattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 22044265  T
Q  116 ttattggtgtgatttttc 133  Q
    |||||||||| |||||||    
T  22044264 ttattggtgttatttttc 22044247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 16931763 - 16931631
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  16931763 tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgttttggttgcttaattatcccttgctccacacattaagttg 16931664  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||| |||||    
T  16931663 ttattggtgtgatttttcatcgaattcacaaca 16931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 8631394 - 8631260
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8631394 tgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttgttttagttgcttgattatcccttgctccacacatcaag 8631295  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8631294 ttgttattggtgtga-ttttcatcgaattcgcaaca 8631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 9176449 - 9176315
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9176449 tgtgttcttctcgccgttgtttttctacttttggcttgtatttaattattccatacactttgttttggttgcttgattatcccttgctccacacatcaag 9176350  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||| ||||||||||||||    
T  9176349 ttgttattggtgtga-ttttcgtcgaattcgcaaca 9176315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 14787396 - 14787274
Alignment:
Q  29 gttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14787396 gttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgt 14787297  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||    
T  14787296 gatttttcatcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 14789395 - 14789273
Alignment:
Q  29 gttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14789395 gttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgt 14789296  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||    
T  14789295 gatttttcatcgaattcgcaaca 14789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 31849574 - 31849440
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31849574 tgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag 31849475  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||||||||||||||    
T  31849474 ttgttattggtgtga-ttttcatcgaattcgcaaca 31849440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 47868759 - 47868894
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||| |||||||||||||||||||||||||||||     || ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  47868759 tgtgttcttctcaccgttgttttctacttttggcttgtattttattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaag 47868858  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||||||||    
T  47868859 ttgttattggtgtgatttttcatcgaattcgcaaca 47868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 51015603 - 51015722
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51015603 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 51015702  T
Q  114 tgttattggtgtgatttttc 133  Q
    ||||||||||||| ||||||    
T  51015703 tgttattggtgtgttttttc 51015722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 9148593 - 9148727
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  9148593 tgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgttccacacatcaagt 9148692  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||| ||| |||||||||||||||||    
T  9148693 tgttattggtgtgttttctcatcgaattcgcaaca 9148727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 14633676 - 14633810
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  14633676 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacattttgtttcggttgcttgattatctcttgctccacacatcaagt 14633775  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||| |||||||||||| ||||    
T  14633776 tgttattggtgtgatttctcatcgaattcggaaca 14633810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 22046659 - 22046526
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    ||||||||||| |||||||||||||||||| ||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22046659 tgttcttctcgtcgttgttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 22046560  T
Q  116 ttattggtgtgatttttc-atcgaattcgcaaca 148  Q
    |||||||||||||||||| ||||||||| |||||    
T  22046559 ttattggtgtgatttttcgatcgaattcacaaca 22046526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 38928147 - 38928024
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||||  |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38928147 cgttgttttctacttttggcttgtgattataactgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtg 38928048  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||    
T  38928047 tgatttttcatcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 44599811 - 44599680
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||| ||||||||||    || ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  44599811 tgttcttctcgccgttgttttctacttttgccttgtatttaattattccatacgctttgttttggttgcttaattatcc-ttgctccacacatcaagttg 44599713  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||||||    
T  44599712 ttattggtgtgatttttcatcgaattcgcaaca 44599680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 11437720 - 11437855
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||| || |||||||||||| ||||||||| ||||||||    
T  11437720 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggctgcttgattatctcttgctccatacatcaag 11437819  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  11437820 ttgttattggtgtgatttttcatcgaattcacaaca 11437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 11435312 - 11435438
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||| |||||||||||||||||||||||||||    || ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11435312 tgtgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatctcttgctccacacatcaag 11435411  T
Q  113 ttgttattggtgtgatttttcatcgaa 139  Q
    |||||||||||||||||||||||||||    
T  11435412 ttgttattggtgtgatttttcatcgaa 11435438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 5198761 - 5198896
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5198761 tgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatccattgctccacacatcaag 5198860  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaacat 149  Q
    || |||||||||||| |||||||||||||| ||||||    
T  5198861 ttattattggtgtga-ttttcatcgaattcacaacat 5198896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 11006229 - 11006094
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11006229 tgtgttcttctcgccgttgtttttctactttttgcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag 11006130  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||  ||||||||| |||||    
T  11006129 ttgttattggtgtgtttttcgatcgaattcacaaca 11006094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 11008543 - 11008408
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11008543 tgtgttcttctcgccgttgtttttctactttttgcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag 11008444  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||  ||||||||| |||||    
T  11008443 ttgttattggtgtgtttttcgatcgaattcacaaca 11008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 7941681 - 7941814
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||||||| |||||||||||||||| |||||||||     || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7941681 tgtgttcttctcgccattgttttctacttttgccttgtatttcattgttccatacactttgttttggttgcttaattatcccttgctccacacatcaagt 7941780  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||| ||||||||| ||||||||||||||||||||    
T  7941781 tgttgttggtgtga-ttttcatcgaattcgcaaca 7941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 22802706 - 22802577
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||| |||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22802706 tctcgctgttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgtta 22802607  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||| |||||    
T  22802606 ttggtgtgatttttcatcgaattcacaaca 22802577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 24889157 - 24889294
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| |||||||||||||||||||||||  |||||| | |  |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  24889157 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttggttgttagattattccttgctccacacatcaagttgttat 24889256  T
Q  120 tggtgtgat-ttttcatcgaattcgcaacataaactaa 156  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  24889257 tggtgtgatattttcatcgaattcgcaacataaactaa 24889294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 36921458 - 36921338
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| |  |||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  36921458 tgttttctacttttggcttgtgtttataattgtttcatacactttattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga 36921359  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||    
T  36921358 tttttcatcgaattcgcaaca 36921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 38409564 - 38409696
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||    || |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  38409564 tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaatttgttttagttgcttgattatcccttgctccacacatcaagttg 38409663  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||| ||||  || |||||| |||||    
T  38409664 ttattggtgtgtttttcgattgaattcacaaca 38409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 18847510 - 18847628
Alignment:
Q  14 tgtgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    || |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18847510 tgtgttcttctcgccgttgttttctactttttggcttgtatttaattattccatacactttgttt-ggttgcttgattatcccttgctccacacatcaag 18847608  T
Q  113 ttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||    
T  18847609 ttgttattggtgtgattttt 18847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 16453676 - 16453796
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||||||||||||  ||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  16453676 tgttttctacttttggcttgtgattataactgtttcatacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtga 16453775  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||    
T  16453776 tttttcatcgaattcacaaca 16453796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 49088921 - 49089044
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||    
T  49088921 cgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttactcaacacatcaagtttgttattggtg 49089020  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||    
T  49089021 tgatttttcatcgaattcgcaaca 49089044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 22134593 - 22134476
Alignment:
Q  14 tgtgttcttctcgccgttgttttc--tacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||||||||||   |||||||||||||||||||    || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  22134593 tgtgttcttctcgccgttgtttttcttacttttggcttgtatttaattgttccatacactttgttttggttgtttgattatcccttgctccacacatcaa 22134494  T
Q  112 gttgttattggtgtgatt 129  Q
    ||||||||||||||||||    
T  22134493 gttgttattggtgtgatt 22134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 22800834 - 22800705
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||| |||||||||||||||||| ||||||| | |  |||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  22800834 tctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgactatcccttgctccccacatcaagtttgtta 22800735  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||||||    
T  22800734 ttggtgtgatttttcatcgaattcgcaaca 22800705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 47210755 - 47210637
Alignment:
Q  30 ttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatt 129  Q
    |||||||||||||||||||||||||||    || ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  47210755 ttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgctttattatctcttgctccacacatcaagttgttattggtgtgatt 47210656  T
Q  130 tttcatcgaattcgcaaca 148  Q
    |  || |||||||||||||    
T  47210655 tcacaacgaattcgcaaca 47210637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 16934117 - 16933988
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||    || ||||| | ||||||||||||||| ||  ||||||||||||||||| ||||||    
T  16934117 tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgc-ttgttttggttgcttaat--tcccttgctccacacattaagttg 16934021  T
Q  116 ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||||||||| |||||    
T  16934020 ttattggtgtgatttttcatcgaattcacaaca 16933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 2891657 - 2891780
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | |  |||||||||| |||||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  2891657 cgttgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattattctttgctccacacatcaagtttgttattggtg 2891756  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||| |||||    
T  2891757 tgatttttcatcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 3937244 - 3937126
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    ||||||||||||||||||  ||||  || || ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3937244 cgttgttttctacttttgt-ttgtgattttatcttccatacactttgttt-ggttgcttgattatcccttgctcctcacatcaagttgttattggtgtga 3937147  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||    
T  3937146 tttttcatcgaattcgcaaca 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 22132366 - 22132248
Alignment:
Q  14 tgtgttcttctcgccgttgttttc--tacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatca 110  Q
    |||||||||||||||||||||||   |||||||||||||||||||    || ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22132366 tgtgttcttctcgccgttgtttttcttacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatcccttgctccacacatca 22132267  T
Q  111 agttgttattggtgtgatt 129  Q
    |||||||||||||||||||    
T  22132266 agttgttattggtgtgatt 22132248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 17662220 - 17662092
Alignment:
Q  21 ttctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    ||||||| ||||||||||||||||||| |||  |||||| | |  ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  17662220 ttctcgctgttgttttctacttttggcatgtgattataattgttccatacactttggtttgattgcttgattatcccttgctccacacatcaagttgtta 17662121  T
Q  119 ttggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||| |||||| |||||||||||||    
T  17662120 ttggtgtga-ttttcaacgaattcgcaaca 17662092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 36919549 - 36919432
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||| ||||| ||||||| | |  |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  36919549 tgttttctacttttgacttgtgtttataattgttccatacactttattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga 36919450  T
Q  128 tttttcatcgaattcgca 145  Q
    ||||||||||||||||||    
T  36919449 tttttcatcgaattcgca 36919432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 56030828 - 56030945
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||| |||||| || ||||||||||||||    
T  56030828 tgttttctacttttgt-ttgtatttataacttccatacactttgttttggttgcgtgactatctcttgctccacatatcaagtttattattggtgtgatt 56030926  T
Q  130 tttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||    
T  56030927 tttcatcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 37313044 - 37312924
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||| |  |||||| |  ||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  37313044 tgttttctacttttggcttatgattataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttattattggtgtga 37312945  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||||||||| |||||||||||    
T  37312944 tttttcatcaaattcgcaaca 37312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 24446623 - 24446502
Alignment:
Q  30 ttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||||||||| ||||||| |||  |||||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  24446623 ttgttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttacttcacacatcaagtttgttattggtgtg 24446524  T
Q  127 atttttcatcgaattcgcaaca 148  Q
     ||| ||||||||||| |||||    
T  24446523 ttttctcatcgaattcacaaca 24446502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 18409309 - 18409192
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttt 130  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||| |||    
T  18409309 ttttctacttttgtcttgtgattataacttccatacactttgttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttt 18409210  T
Q  131 ttcatcgaattcgcaaca 148  Q
    |||||||||||| |||||    
T  18409209 ttcatcgaattcacaaca 18409192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 40637435 - 40637566
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgtttt--ggttgcttgattatcccttgctccacacatcaagttgtt 117  Q
    |||||| |||||||||||||||||||||||  |||||| | |  |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  40637435 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgattattccttgctccacacatcaagttgtt 40637534  T
Q  118 attggtgtgat-ttttcatcgaattcgcaaca 148  Q
    ||||||||||| || ||| |||||||||||||    
T  40637535 attggtgtgatattctcaacgaattcgcaaca 40637566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 40091378 - 40091259
Alignment:
Q  33 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-at 128  Q
    ||||||||||||||||||| ||||||| | |  |||||||||| |||||||||||||||||||  ||||||||||||||||| |||||||||||||| ||    
T  40091378 ttttctacttttggcttgtgtttataattattccatacactttattttggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaat 40091279  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||    
T  40091278 ttttcatcgaattcgcaaca 40091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 33415455 - 33415333
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttc--atacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||||| | ||  |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  33415455 tgttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtg 33415356  T
Q  127 atttttcatcgaattcgcaacat 149  Q
    |||| |||||| |||||||||||    
T  33415355 atttctcatcggattcgcaacat 33415333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 4215672 - 4215792
Alignment:
Q  32 gttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga-- 127  Q
    ||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||      
T  4215672 gttttctacttttggcttgtgattataattgtttcatacactttgtttttgttgcttgattattccttgcttcacacatcaagttgttatttgtgtgagt 4215771  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| |||||||||||||||||    
T  4215772 tttctcatcgaattcgcaaca 4215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 6133202 - 6133326
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||| ||||| ||||||| |  |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  6133202 cgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttcggttgcttgattattccttgctccacacatcaagtttgttattggtg 6133301  T
Q  125 tgattttt--catcgaattcgcaac 147  Q
    | ||||||  |||||||||| ||||    
T  6133302 taattttttccatcgaattcacaac 6133326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 142
Target Start/End: Original strand, 27499413 - 27499530
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||| ||||| ||||||| | |  |||| ||||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  27499413 cgttgttttctacttttgacttgtgtttataattgttccataaactttgttttggttgcttggttattcattgctccacacatcaagtttgttattggtg 27499512  T
Q  125 tgatttttcatcgaattc 142  Q
    ||||||||||||||||||    
T  27499513 tgatttttcatcgaattc 27499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 16455629 - 16455714
Alignment:
Q  64 catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  16455629 catacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 16455714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 5664605 - 5664722
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    |||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  | | ||||||||||||||| | |||||||||||| |    
T  5664605 tgttttctacttttggtttgtcattataacttccatacactttgttttggttgcttgattattaccttctccacacatcaagtattttattggtgtga-t 5664703  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||    
T  5664704 tttcatcgaattcacaaca 5664722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 47563127 - 47563248
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||| | ||||||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||     
T  47563127 tgttttctacttttggcttatgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgg 47563226  T
Q  128 tttt-tcatcgaattcgcaaca 148  Q
    |||| ||||| ||||| |||||    
T  47563227 ttttctcatcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 5101284 - 5101404
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||| | |||||||||| ||||||| | |  ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||     
T  5101284 tgttttctccctttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgatccacacatcaagtttgttattggtgtgt 5101383  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| ||||||||||| |||||    
T  5101384 tttctcatcgaattcacaaca 5101404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 41997858 - 41997968
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    |||||||||||||||  ||||  ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||||| ||    
T  41997858 tgttttctacttttgt-ttgtgattataacttccatacactttgttttggttgcttgattatcactttctccacacatcaagtttattattggtgtgttt 41997956  T
Q  130 tttcatcgaatt 141  Q
    ||||||| ||||    
T  41997957 tttcatcaaatt 41997968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 12102450 - 12102566
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg-ttattggtgtgatt 129  Q
    |||||| |||||||| ||||| |||||||||| |||||||||||||||||||||| | ||||  ||||||||||||||||||| | |||||||||||| |    
T  12102450 tgttttttacttttg-cttgtgtttataacttccatacactttgttttggttgctcggttattacttgctccacacatcaagtagtttattggtgtga-t 12102547  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||    
T  12102548 tttcatcgaattcacaaca 12102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 18534797 - 18534689
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    |||||||||||||  |||| |||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||  ||    
T  18534797 ttttctacttttgt-ttgtgtttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttattggtgtga-gtt 18534700  T
Q  132 tcatcgaattc 142  Q
    |||||||||||    
T  18534699 tcatcgaattc 18534689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 3824569 - 3824447
Alignment:
Q  33 ttttctactttt-ggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||| ||||||| ||||||||| |  |||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  3824569 ttttctactttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga 3824470  T
Q  128 tttt--tcatcgaattcgcaaca 148  Q
    ||||  ||||||||||| |||||    
T  3824469 tttttctcatcgaattcacaaca 3824447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 12395813 - 12395692
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||| ||||||||||||| ||| ||||||| |||   |||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  12395813 cgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtg 12395714  T
Q  125 tgatttttcatcgaattcgcaa 146  Q
    || ||| |||| ||||| ||||    
T  12395713 tgttttctcattgaatttgcaa 12395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 12400775 - 12400654
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||| ||||||||||||| ||| ||||||| |||   |||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  12400775 cgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtg 12400676  T
Q  125 tgatttttcatcgaattcgcaa 146  Q
    || ||| |||| ||||| ||||    
T  12400675 tgttttctcattgaatttgcaa 12400654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 19323061 - 19323177
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    |||||| |||||||| || || |||||||||| |||||||||| |||| |||||||||||||  ||||||||||||||||||| | |||||||||||| |    
T  19323061 tgttttatacttttg-ctcgtgtttataacttccatacactttattttagttgcttgattattacttgctccacacatcaagtattttattggtgtga-t 19323158  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||||||||||| |||||    
T  19323159 tttcatcgaattcacaaca 19323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 36378659 - 36378777
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga 127  Q
    |||||||||||||| | |||| ||||||| |  |||||||||||||||| ||||||||||||||  ||||||||||| ||||||| | ||||||||||||    
T  36378659 tgttttctacttttcgtttgtgtttataattgtttcatacactttgttt-ggttgcttgattattacttgctccacatatcaagtattttattggtgtga 36378757  T
Q  128 tttttcatcgaattcgcaaca 148  Q
     ||||||||||||||||||||    
T  36378758 -ttttcatcgaattcgcaaca 36378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 48486687 - 48486803
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||||||| | |  ||| ||||||||||| |||||||||||||| |||| ||||| |||| || |||||||||||||    
T  48486687 gttgttttctacttttggcttgtgtttataattgttccattcactttgttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgt 48486786  T
Q  126 gatttttcatcgaattc 142  Q
    | ||| |||||||||||    
T  48486787 gttttctcatcgaattc 48486803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 52942460 - 52942329
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttgctccacacatc-aagttgtt 117  Q
    |||||| ||||||||||||||||||||||| |||||||   || ||||||||||| ||||| |||| |||||||| ||| ||||||||||| || |||||    
T  52942460 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctcttactccacacatcaaatttgtt 52942361  T
Q  118 attggtgtga-tttttcatcgaattcgcaaca 148  Q
    ||| |||||| |||||||||||||| ||||||    
T  52942360 atttgtgtgattttttcatcgaatttgcaaca 52942329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 38890191 - 38890090
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    ||||||||| ||||| ||||| |||||||||| ||||||||||| |||||||||| |||||| |||||||||||| ||||| | | ||||||||||||||    
T  38890191 tgttttctaattttgccttgtgtttataacttccatacactttg-tttggttgctagattattccttgctccacatatcaaatattttattggtgtgatt 38890093  T
Q  130 ttt 132  Q
    |||    
T  38890092 ttt 38890090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 8756221 - 8756103
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    ||||||||| |||||||| ||||| ||||||||| |||  ||||| |||||||||||||||||||  ||||||||||||||||||| | |||||| ||||    
T  8756221 cgttgttttttacttttg-cttgtgtttataactgtcacccactt-gttttggttgcttgattattacttgctccacacatcaagtattttattgatgtg 8756124  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    | |||||||||||||| |||||    
T  8756123 a-ttttcatcgaattcacaaca 8756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 18537444 - 18537360
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||| ||||||||  |||| |||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  18537444 cgttgttttatacttttgt-ttgtgtttataacttccatacactttgttttgattgcttgattattacttgctccacacatcaagt 18537360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 47275092 - 47275212
Alignment:
Q  31 tgttttctacttttggcttgtatttataact-ttc-atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | ||| ||||||||  ||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||     
T  47275092 tgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgttattgatgtgt 47275191  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||  || ||||||| |||||    
T  47275192 tttcacaacgaattcacaaca 47275212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 15032488 - 15032401
Alignment:
Q  53 tttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaatt 141  Q
    |||||||||| |||||||||||||| ||||||||||||||  |||||||| |||||||||| | |||||||||||| |||||||||||||    
T  15032488 tttataacttccatacactttgttt-ggttgcttgattattacttgctccgcacatcaagtattttattggtgtga-ttttcatcgaatt 15032401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 19096293 - 19096370
Alignment:
Q  72 ttgttttggttgcttgattatcccttgctccacacatcaagttg-ttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||| |||||||||||| |||||||| ||||||||||||| ||  ||||| |||||||||||||||||||||||||||    
T  19096293 ttgtattggttgcttgactatcccttactccacacatcaaatttattattagtgtgatttttcatcgaattcgcaaca 19096370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 24879351 - 24879423
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattat 92  Q
    |||||| ||||||||||||||||||||||| |||||||   || |||||||||||||||||||||||||||||    
T  24879351 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattat 24879423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 619416 - 619298
Alignment:
Q  29 gttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    ||||||||||||||||| |||||  |||||||| | || ||||| || |||||||||||| |||||||| ||||||||||| || || |||||||||||     
T  619416 gttgttttctacttttg-cttgtgattataactgtgatccactt-gtattggttgcttgactatcccttactccacacatcaaatttattattggtgtgt 619319  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| ||||||||| |||||||    
T  619318 tttctcatcgaatccgcaaca 619298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 30136915 - 30137026
Alignment:
Q  29 gttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    |||||||||||||||||| |||| ||||||||||  |||||||||  |||||||| ||||||||  |||| |||||| ||||| |  |||||| ||||||    
T  30136915 gttgttttctacttttggtttgtgtttataacttctatacacttt-atttggttgtttgattattacttgttccacatatcaaatatttattgatgtgat 30137013  T
Q  129 ttttcatcgaatt 141  Q
    ||| |||||||||    
T  30137014 tttacatcgaatt 30137026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 10113236 - 10113351
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    |||| |||||||||| ||||| ||||||| | |||  |||||||||||||||||||||||||   |||||||||||||||| | | ||||||||||||||    
T  10113236 tgttatctacttttg-cttgtgtttataaatgtcacccactttgttttggttgcttgattat--tttgctccacacatcaaatattttattggtgtgatt 10113332  T
Q  130 tttcatcgaattcgcaaca 148  Q
    ||||| ||| ||| |||||    
T  10113333 tttcaacgacttcacaaca 10113351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 28454051 - 28454168
Alignment:
Q  29 gttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgt-tattggtgtga 127  Q
    ||||||||||||||||| ||||| ||||||| | |||| ||||||||||||||| |||||||||   ||||| ||||||||||||  | |||||||||||    
T  28454051 gttgttttctacttttg-cttgtgtttataattgtcatccactttgttttggtttcttgattat--tttgcttcacacatcaagtaatatattggtgtga 28454147  T
Q  128 tttttcatcgaattcgcaacat 149  Q
     |||||| ||||||| ||||||    
T  28454148 -ttttcaacgaattcacaacat 28454168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 36380716 - 36380827
Alignment:
Q  31 tgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga 127  Q
    ||||||||||||||||||||| |||||||   |||||||||||||| |||| ||||||||| ||  ||| ||||||||||||| | | ||||||||||||    
T  36380716 tgttttctacttttggcttgtgtttataattgtttcatacactttg-tttgattgcttgatcattacttactccacacatcaaatattttattggtgtga 36380814  T
Q  128 tttttcatcgaatt 141  Q
     |||||||||||||    
T  36380815 -ttttcatcgaatt 36380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 38270071 - 38269995
Alignment:
Q  72 ttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||  ||||||||| |||||    
T  38270071 ttgttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtg-ttttctatcgaattcccaaca 38269995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 13547524 - 13547635
Alignment:
Q  33 ttttctacttttggcttgtatttataa--ctttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||||||| |||||||   || ||||||||||| |||||||||  | |||||| |||| ||||||||||||| |||||||||||||| |    
T  13547524 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtgtt 13547623  T
Q  129 ttttcatcgaat 140  Q
    || |||| ||||    
T  13547624 ttctcattgaat 13547635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 16185804 - 16185686
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||||||||||||||| ||||| ||||||||| |||  ||||| ||||||||||||||||||    |||||||| ||||||||| | |||||||||||    
T  16185804 cgttgttttctacttttg-cttgtgtttataactgtcacccactt-gttttggttgcttgatta--atttgctccatacatcaagtattttattggtgtg 16185709  T
Q  127 at-ttttcatcgaattcgcaaca 148  Q
    || |||||| ||||||| |||||    
T  16185708 atcttttcaacgaattcacaaca 16185686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 52043528 - 52043427
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgtttt--ggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga 127  Q
    |||||||||| |||| ||||| ||||||||| |||  ||| |||||||  |||||||||||||| |  ||||||||||||||||| | ||||||||||||    
T  52043528 tgttttctacgtttg-cttgtgtttataactgtcacccacgttgttttttggttgcttgattattc--tgctccacacatcaagtattttattggtgtga 52043432  T
Q  128 ttttt 132  Q
    |||||    
T  52043431 ttttt 52043427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 18311275 - 18311215
Alignment:
Q  90 tatcccttgctccacacatcaag-ttgttattggtgtga-tttttcatcgaattcgcaaca 148  Q
    |||| |||||||||||||||||| || |||||||||||| ||||||||||||||| |||||    
T  18311275 tatcacttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaaca 18311215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 24880813 - 24880887
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataa--ctttcatacactt--tgttttggttgcttgattat 92  Q
    |||||| ||||||||||||||||||||||| |||||||   || | |||||||  ||||||||||||||||||||    
T  24880813 tctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgattat 24880887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 16489628 - 16489682
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcgcaacat 149  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||| ||||||    
T  16489628 ttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaacat 16489682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 4885149 - 4885202
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgattttt-catcgaattcgcaaca 148  Q
    ||||||||| ||||||||| ||||||||||||||||| || ||||||| |||||    
T  4885149 ttgctccacgcatcaagtttttattggtgtgatttttacaacgaattcacaaca 4885202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 9864115 - 9864196
Alignment:
Q  68 cactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||| |||||||| |||||||||   ||  |||||||||||||| | |||||| |||||||||||| ||||||| |||||    
T  9864115 cactttattttggtttcttgattattttttcttccacacatcaagtattttattgatgtgatttttcaacgaattcacaaca 9864196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 40998986 - 40998907
Alignment:
Q  30 ttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||  ||||| ||||||||| |||  ||||| |||||||||||||||||||  |||| | ||||||||||    
T  40998986 ttgttttctactttta-cttgtgtttataactgtcacccactt-gttttggttgcttgattattacttgtttcacacatcaa 40998907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 45279976 - 45279844
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45279976 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt 45279877  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaa 146  Q
    ||||||||||||||||| |||||||||||||||    
T  45279876 tgttattggtgtgatttctcatcgaattcgcaa 45279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 27105077 - 27105209
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||    || |||||||||||||||||||||||||||||||||||||||||||||||||     
T  27105077 tgtgttcttctcgccgttgttttctacttttggcttgcatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 27105176  T
Q  113 ttgttattggtgtgatttttcatcgaattcgca 145  Q
    |||||||||||||||||||||||||||||||||    
T  27105177 ttgttattggtgtgatttttcatcgaattcgca 27105209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 19501958 - 19501843
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19501958 ttttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga-ttt 19501860  T
Q  132 tcatcgaattcgcaaca 148  Q
    |||||||||||||||||    
T  19501859 tcatcgaattcgcaaca 19501843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 13910020 - 13909902
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13910020 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttactccacacatcaagt 13909921  T
Q  114 tgttattggtgtgattttt 132  Q
    |||||||||||||| ||||    
T  13909920 tgttattggtgtgactttt 13909902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 19504291 - 19504178
Alignment:
Q  35 ttctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttc 133  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19504291 ttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga-ttttc 19504193  T
Q  134 atcgaattcgcaaca 148  Q
    ||||||||| |||||    
T  19504192 atcgaattcacaaca 19504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 23452212 - 23452084
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||    || ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23452212 tgtgttcttctcgccgttgttttctacttttagcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag 23452113  T
Q  113 ttgttattggtgtgatttttcatcgaattc 142  Q
    ||||||||||||||| ||||||||||||||    
T  23452112 ttgttattggtgtga-ttttcatcgaattc 23452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 24162198 - 24162063
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  24162198 tgtgtttttctcgccgttgttttctacttttggcttgtatttaattgtttcatacacttttttttggttgcttgattatctctttctccacacatcaagt 24162099  T
Q  114 tgttattggtgtgat-ttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| ||||||||| |||| |||||    
T  24162098 tgttattggtgtgatattttcatcgtattcacaaca 24162063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 36558856 - 36558721
Alignment:
Q  14 tgtgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||||||| |||||||||||||||| |||| |||||||    || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36558856 tgtgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttgttttggttgcttgattatcccttgctccacacatcaag 36558757  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    || ||||||||||||||||||||||||||| |||||    
T  36558756 ttattattggtgtgatttttcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 45332155 - 45332020
Alignment:
Q  14 tgtgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    || || || ||||||||||||||||| ||||||||||| |||||||||||||    
T  45332155 tgtgttcttctcgccgttgttttctactttttggcttgtatttaattgttacaaacgctttgttttggttgcttaattatcccttgttccacacatcaag 45332056  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||||| |||||    
T  45332055 ttgttattggtgtgatttttcatcgaattcacaaca 45332020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 35215565 - 35215431
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||| ||||||||||    |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  35215565 tgttcttctcgccgttgttttctacttttgacttgtatttaattatttcatatgctttgttttggttgcttaattatcccttgctccacacatcaagttg 35215466  T
Q  116 ttattggtgtgatttttcatcgaattcgcaacata 150  Q
    ||||||||||||||||| |||  |||| |||||||    
T  35215465 ttattggtgtgatttttgatcagattcacaacata 35215431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 36561114 - 36560981
Alignment:
Q  16 tgttcttctcgccgttgttttctactttt-ggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||| |||||||||||||||| |||| |||||||    || ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  36561114 tgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttgttttggttgcttgattattccttgctccacacatcaagtt 36561015  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||| |||||    
T  36561014 gttattggtgtgatttttcatcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 35217942 - 35217826
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||||||||||||||||| ||||||||||    || ||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  35217942 tgttcttctcgccgttgttttctacttttgacttgtatttaattattccatacgctttgttttggttgcttaattatctcttgctccacacatcaagttg 35217843  T
Q  116 ttattggtgtgattttt 132  Q
    |||||||||||||||||    
T  35217842 ttattggtgtgattttt 35217826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 19007927 - 19008051
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  19007927 cgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttattggtg 19008026  T
Q  125 tga-tttttcatcgaattcgcaaca 148  Q
    ||| ||||||||||||||| |||||    
T  19008027 tgattttttcatcgaattcacaaca 19008051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 17849403 - 17849528
Alignment:
Q  27 ccgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||||||||||||||||||| |||| || | |  ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17849403 ccgttgttttctacttttggcttgtgtttaaaattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggt 17849502  T
Q  124 gtga-tttttcatcgaattcgcaaca 148  Q
    |||| ||||||||||||||| |||||    
T  17849503 gtgattttttcatcgaattcacaaca 17849528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 28196925 - 28197045
Alignment:
Q  31 tgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||| || |||||||||||||||||||| || |||||||||||||||    
T  28196925 tgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgctggactatcccttgctccacacatcaaatttgttattggtgtga 28197024  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||||||||||| || |||||    
T  28197025 tttttcatcgaactcacaaca 28197045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 22162992 - 22162869
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    ||||||||||||||||||||||||  |||||||| |  |||||| |||||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  22162992 cgttgttttctacttttggcttgtgcttataactgttccatacaatttgttttggttgcttgattatcccttgcttcacacatcaaaattgttattggtg 22162893  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    || ||| |||||||||||||||||    
T  22162892 tgttttctcatcgaattcgcaaca 22162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 42064778 - 42064884
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    || ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  42064778 tgtgttcttcttgccgttgttttctactttttgcttgtatttaattgttccatacactttgttttagttgcttgatcatcccttgctccacacatcaagt 42064877  T
Q  114 tgttatt 120  Q
    |||||||    
T  42064878 tgttatt 42064884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 7462919 - 7462787
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||||||||||||||||||||||  |||||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7462919 tctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgattatcctttgctccacacatcaagtttgtta 7462820  T
Q  119 ttggtgtgatttt-tcatcgaattcgcaacata 150  Q
    | | |||| |||| ||| |||||||||||||||    
T  7462819 tcgatgtggttttctcaacgaattcgcaacata 7462787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 21520664 - 21520534
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||||| | |  ||||||||||  |||||||||| |||||||| |||||||||||||||||| |||||    
T  21520664 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttgctccacacatcaagtttgtt 21520565  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||| ||| |||||||||||||||||    
T  21520564 attggtgtgttttctcatcgaattcgcaaca 21520534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 22874423 - 22874522
Alignment:
Q  53 tttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaacataa 151  Q
    |||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  22874423 tttataacttccatacactttgttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaacataa 22874522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 14837558 - 14837679
Alignment:
Q  31 tgttttctacttttggcttgtatttataact-ttc-atacactttgttttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgtg 126  Q
    |||||| |||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||    
T  14837558 tgttttatacttttggcttgtgtttataattgttctatacactttgttttggttgcttgattatcacttgctccacacatcaagtattgttattgatgtg 14837657  T
Q  127 atttttcatcgaattcgcaaca 148  Q
    |||| ||||||||||| |||||    
T  14837658 atttctcatcgaattcacaaca 14837679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 28459157 - 28459038
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga 127  Q
    |||||||||||||||| |||| ||||||| | |  |||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  28459157 tgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtgttttattggtgtga 28459058  T
Q  128 tttttcatcgaattcgcaaca 148  Q
     |||||||||||||| |||||    
T  28459057 -ttttcatcgaattcacaaca 28459038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 3022459 - 3022582
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||| |||||||||||| ||||||| | |  |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||    
T  3022459 cgttgttttctgcttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttgttatttgtg 3022558  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    |||| | ||| ||||||| |||||    
T  3022559 tgatctctcaccgaattcacaaca 3022582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 11578077 - 11577954
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    |||||||||||||||||||||||| |||| ||||| |||| ||||| ||||||||||||||||||  |||| ||||||||||||||| |||||  |||||    
T  11578077 cgttgttttctacttttggcttgtgttta-aacttccatatactttattttggttgcttgattattacttgttccacacatcaagtttttattaatgtga 11577979  T
Q  128 -tttttcatcgaattcgcaacataa 151  Q
     ||||||||||||||| ||||||||    
T  11577978 ttttttcatcgaattcacaacataa 11577954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 43623553 - 43623422
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gtt 117  Q
    |||||| ||||||||||||||||||||| |  |||||| | |  ||||||||||  |||||||||| ||||||||  ||||||||||||||||||| |||    
T  43623553 tctcgctgttgttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattgctccacacatcaagttagtt 43623454  T
Q  118 attggtgtgatttttcatcgaattcgcaacat 149  Q
    ||||||||||||||||||||||||||||||||    
T  43623453 attggtgtgatttttcatcgaattcgcaacat 43623422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 22287301 - 22287181
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||| |||| ||||| ||||||| | |  |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||     
T  22287301 tgttttctacgtttgacttgtttttataattgttccatacactatgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgt 22287202  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||| ||||||||||| |||||    
T  22287201 tttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 42923475 - 42923351
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact--ttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||||| |  ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||    
T  42923475 cgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgctccacacatcaagtttgttattggt 42923376  T
Q  124 gtgatttttcatcgaattcgcaaca 148  Q
    ||| |||  || ||||||| |||||    
T  42923375 gtgttttcacaacgaattcacaaca 42923351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 11739532 - 11739421
Alignment:
Q  40 cttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 136  Q
    |||||| ||||||||||||| |  |||||||||||||||||  || ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttatttcttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcatc 11739433  T
Q  137 gaattcgcaaca 148  Q
    |||||| |||||    
T  11739432 gaattcacaaca 11739421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 42453807 - 42453890
Alignment:
Q  64 catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  42453807 catacattttattttggttgcttgattatctcttgctccacacatcaagttgttattggtgtga-ttttcatcgaattcacaaca 42453890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 20592368 - 20592484
Alignment:
Q  33 ttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga-ttt 130  Q
    ||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||||||  ||||||| |||||||| || | |||||||||||| |||    
T  20592368 ttttctacttttg-cttgtgattataacttccatacactttgttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgatttt 20592466  T
Q  131 ttcatcgaattcgcaaca 148  Q
    |||||||||||| |||||    
T  20592467 ttcatcgaattcacaaca 20592484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 6258782 - 6258668
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||||| |||||| ||||||| | |  || |||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||     
T  6258782 tgttttctacttttagcttgtgtttataattgttccagacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttattggtatgt 6258683  T
Q  128 tttttcatcgaattc 142  Q
    ||| |||||||||||    
T  6258682 tttctcatcgaattc 6258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 38020370 - 38020484
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    |||||||||||||| ||||||  |||||| | |  ||||||||||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||    
T  38020370 tgttttctacttttagcttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccatacatcaaatttgttattggtgtga 38020469  T
Q  128 tttttcatcgaattc 142  Q
    |||| |||| |||||    
T  38020470 ttttacatcaaattc 38020484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 45238964 - 45238842
Alignment:
Q  31 tgttttctacttttggcttgtatttataact-ttcata--cactttg-ttttggttgcttgattatcccttgctccacacatcaagttg-ttattggtgt 125  Q
    |||||||||||||||||||||  |||||||| || |||  ||||| | |||||||||||||| |||| |||| |||||||||||||||  ||||||||||    
T  45238964 tgttttctacttttggcttgtgattataactgttgatatccacttcgattttggttgcttgactatcgcttggtccacacatcaagtttattattggtgt 45238865  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||    
T  45238864 gatttttcatcgaattcgcaaca 45238842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 22707716 - 22707595
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    |||||||||||| || ||||| ||||||| | |  ||||||||||||||||||||||||||| | |||| ||||||||||| || ||||||||||||||     
T  22707716 tgttttctacttctgccttgtgtttataattgttccatacactttgttttggttgcttgattgttccttactccacacatcaaatttgttattggtgtgg 22707617  T
Q  128 tttt-tcatcgaattcgcaaca 148  Q
    |||| |||||||||||||||||    
T  22707616 ttttctcatcgaattcgcaaca 22707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 31732746 - 31732630
Alignment:
Q  31 tgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga-tt 129  Q
    |||||||||||||||| ||||  ||||||||| |||||||| ||||||||||||||||||||  |||||| ||||||||||    ||||| |||||| ||    
T  31732746 tgttttctacttttggtttgtgattataacttccatacactctgttttggttgcttgattataacttgcttcacacatcaa---attattcgtgtgattt 31732650  T
Q  130 tttcatcgaattcgcaacat 149  Q
    ||||||||||||| ||||||    
T  31732649 tttcatcgaattcacaacat 31732630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 6264116 - 6263993
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||| ||||||| || |||| | |  ||||||||||||||||||||| ||||  || |||||||||||||||||| |||||||| |||    
T  6264116 cgttgttttctactttcggcttgtgttaataattgttccatacactttgttttggttgcctgatagtcacttgctccacacatcaagtttgttattagtg 6264017  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    || ||| ||||||||||| |||||    
T  6264016 tgttttctcatcgaattcacaaca 6263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 15539497 - 15539396
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataact-ttc-atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||| |||||| ||||||| | ||| ||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||||||    
T  15539497 cgttgttttctactttttgcttgtgtttataattgttcaatacactttgttttgattgcttgataat-ccttgctccacacatcaagtttgttattggtg 15539399  T
Q  125 tga 127  Q
    |||    
T  15539398 tga 15539396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 5375308 - 5375225
Alignment:
Q  33 ttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||| |||||||| ||||||||||||| | |  |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  5375308 ttttttacttttgacttgtatttataattgttccatacactttgttttgattgcttgattatcccttactccacacatcaagtt 5375225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 17897216 - 17897098
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||||||||||||||| ||||| ||||||||| ||||  ||||||||||||||||||||||||   |||||||||||||||||| | |||||| |||     
T  17897216 cgttgttttctacttttg-cttgtgtttataactgtcatcaactttgttttggttgcttgattat--tttgctccacacatcaagtattttattgatgt- 17897121  T
Q  127 atttttcatcgaattcgcaacat 149  Q
    |||||| | ||||||| ||||||    
T  17897120 attttttaacgaattcacaacat 17897098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 34979554 - 34979440
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||| ||| | ||||||| | |  |||||||||| |||||||||||| ||||| |||| |||||||||||||| ||||||||||||||     
T  34979554 tgttttctacttttgacttatgtttataattgttccatacactttattttggttgctttattattccttactccacacatcaagtttgttattggtgtgt 34979455  T
Q  128 tttttcatcgaattc 142  Q
    ||| |||| ||||||    
T  34979454 tttctcattgaattc 34979440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 37962910 - 37962791
Alignment:
Q  29 gttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||   ||||  |||||||||  ||||||| ||||||| || ||| |||||| ||| |||||||||||||| || |||||| |||||    
T  37962910 gttgttttctacttttat-ttgtgattataacttctatacactctgttttgattacttaattatcacttactccacacatcaagtttattattgatgtga 37962812  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||    
T  37962811 tttttcatcgaattcacaaca 37962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 38414150 - 38414028
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgt 125  Q
    |||||||||||||||||  ||||| ||||||| | |  ||||||||||||||| ||||| | |||||| | ||||||||||| ||| ||  | |||||||    
T  38414150 cgttgttttctacttttaccttgtgtttataattattccatacactttgttttcgttgcctaattatcacgtgctccacacaccaattttgttttggtgt 38414051  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    |||||||||| |||||| |||||    
T  38414050 gatttttcatggaattcacaaca 38414028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 22407419 - 22407346
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||| |||| ||||||||    
T  22407419 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgctcc 22407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 23871106 - 23871229
Alignment:
Q  31 tgttttctacttttggcttgtatttataa----ctttcatacactttgttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 125  Q
    ||||||||||||||| ||||| |||||||     ||||||||||||||||||||||  || ||| | |||||||||||||||| || |||||||||||||    
T  23871106 tgttttctacttttgccttgtgtttataattgtttttcatacactttgttttggttatttaattgttccttgctccacacatcaaatttgttattggtgt 23871205  T
Q  126 -gatttttcatcgaattcgcaaca 148  Q
     | ||| |||||||||| ||||||    
T  23871206 agttttctcatcgaatttgcaaca 23871229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 17848775 - 17848816
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagttgt 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  17848775 ttttggttgcttgattatcacttgctccacacatcaagttgt 17848816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 42453043 - 42453085
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtattta 56  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  42453043 tgtgttcttctcgcctttgttttctatttttggcttgtattta 42453085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 13828296 - 13828192
Alignment:
Q  27 ccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtg 124  Q
    |||||||||||||||||| | |||| ||||||||| |||  ||| ||| | ||||||||||||||||   |||||||||||||||| | | |||||||||    
T  13828296 ccgttgttttctactttt-gtttgtgtttataactgtcacccacgttgatattggttgcttgattat--tttgctccacacatcaaatattttattggtg 13828200  T
Q  125 tgattttt 132  Q
    ||||||||    
T  13828199 tgattttt 13828192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 17462714 - 17462767
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcgcaaca 148  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||| |||||    
T  17462714 ttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaaca 17462767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 20146529 - 20146459
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||  | || || |||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  20146529 ttggttgcttgatta--ctttacttcacacatcaagtattttattggtgtgatttttcaacgaattcacaaca 20146459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 69267 - 69133
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag- 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||     
T  69267 tgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacattttgttttggttgcctgattatcccttgctccacacatcaagt 69168  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||| |||||||||||||| |||||    
T  69167 ttgttattggtgtga-ttttcatcgaattcacaaca 69133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 3192 - 3319
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttgg-cttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3192 tgtgttcttctcgccgttgttttctactttttgacttgtatttataactttcatacactttgttt-ggttgcttgattatcccttgctccacacatcaag 3290  T
Q  113 ttgttattggtgtgatttttcatcgaattc 142  Q
    ||||||||||||||| ||||||||||||||    
T  3291 ttgttattggtgtga-ttttcatcgaattc 3319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 6514 - 6646
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  6514 tgttcttctcgccgttgttttctacttttggcttgtatttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 6612  T
Q  115 gttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||||||| |||||    
T  6613 gttattggtgtgatttttcatcgaattcacaaca 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 1426 - 1298
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||||||||||||||||||  || |||||||||||||||    
T  1426 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctttttctccacacatcaagt 1327  T
Q  114 tgttattggtgtgatttttcatcgaattc 142  Q
    |||||||||||||||||||||||||||||    
T  1326 tgttattggtgtgatttttcatcgaattc 1298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 96; Significance: 7e-47; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 50335 - 50457
Alignment:
Q  29 gttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50335 gttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgt 50434  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||    
T  50435 gatttttcatcgaattcgcaaca 50457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 52334 - 52456
Alignment:
Q  29 gttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  52334 gttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgt 52433  T
Q  126 gatttttcatcgaattcgcaaca 148  Q
    |||||||||||||||||||||||    
T  52434 gatttttcatcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 183616 - 183482
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    || |||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  183616 tgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacattttgtttcggttgcttgattatctcttgctccacacatcaagt 183517  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||| |||||||||||| ||||    
T  183516 tgttattggtgtgatttctcatcgaattcggaaca 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 29483 - 29616
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    || |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29483 tgtgttcttctctccgttgttttctacttttggcttttatttaattgttccatacactttgttttgattgcttgattatcccttgctccacacatcaagt 29582  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| ||||||||||||||||||||    
T  29583 tgttattggtgtga-ttttcatcgaattcgcaaca 29616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 41458 - 41325
Alignment:
Q  14 tgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 113  Q
    ||||||||| |||||||||||||||||||||||||||||||||    || |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  41458 tgtgttcttttcgccgttgttttctacttttggcttgtatttaattgttccatacactttgttttgattgcttgattatctcttgctccacacatcaagt 41359  T
Q  114 tgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||||||||||| |||||    
T  41358 tgttattggtgtga-ttttcatcgaattcacaaca 41325  T

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Target: scaffold0267 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 337 - 473
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaa 111  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    || ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  337 tgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa 436  T
Q  112 gttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||| ||| ||||||| |||||    
T  437 gttgttattggtgtgatttctcaacgaattcacaaca 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 14349 - 14231
Alignment:
Q  31 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    ||||||||||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14349 tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga- 14251  T
Q  129 ttttcatcgaattcgcaaca 148  Q
    |||||||||||||| |||||    
T  14250 ttttcatcgaattcacaaca 14231  T

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Target: scaffold0131; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 15393 - 15433
Alignment:
Q  103 acacatcaagtt-gttattggtgtgatttttcatcgaattc 142  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  15393 acacatcaagtttgttattggtgtgatttttcatcgaattc 15433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 1428 - 1309
Alignment:
Q  14 tgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1428 tgtgatcttctcgccgttgtttttctacttttggcttgtatttaattgttacatacactttgttttggttgcttgattatctcttgctccacacatcaag 1329  T
Q  113 ttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||    
T  1328 ttgttattggtgtgattttt 1309  T

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Target: scaffold0011 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 35909 - 36037
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataact--ttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||| | ||||||||||| ||||||| |  ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  35909 tctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttgctccacacatcaagtttgtt 36008  T
Q  118 attggtgtgatttttcatcgaattcgcaa 146  Q
    |||||||| ||||||||||||||||||||    
T  36009 attggtgtaatttttcatcgaattcgcaa 36037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 79508 - 79631
Alignment:
Q  29 gttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||||  |||||| | |  ||||||||||| |||||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  79508 gttgttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgctccacacatcaagtttgttattggtg 79607  T
Q  125 tgatttttcatcgaattcgcaaca 148  Q
    ||||||||||| ||||||||||||    
T  79608 tgatttttcattgaattcgcaaca 79631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 4650 - 4535
Alignment:
Q  16 tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    ||||||||||||| |||||||||||||||||||||||||||    || ||||| |||||  || |||||||||||||||||| ||||||||||||| |||    
T  4650 tgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacgctttgactttgttgcttgattatcccttactccacacatcaaattg 4551  T
Q  116 ttattggtgtgatttt 131  Q
    ||||||||||||||||    
T  4550 ttattggtgtgatttt 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 24705 - 24839
Alignment:
Q  16 tgttcttctcgccgttgtttt-ctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||| | |||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  24705 tgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag 24803  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||| |||||    
T  24804 ttgttattggtgtgatttttcgtcgaattcacaaca 24839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 22430 - 22564
Alignment:
Q  16 tgttcttctcgccgttgtttt-ctacttttggcttgtattt-ataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 112  Q
    |||||||||| | |||||||| |||||||||||| |||||| || | || ||| | ||||| |||||||||||| |||||||||||||||||||||||||    
T  22430 tgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatgcgctttgattttggttgcttaattatcccttgctccacacatcaag 22528  T
Q  113 ttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||||||||||||||| |||||||| |||||    
T  22529 ttgttattggtgtgatttttcgtcgaattcacaaca 22564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 85549 - 85671
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||||| | |  ||||||||||| ||||||||| ||||||||| |||||||||||||| ||| |||||||||||    
T  85549 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgctccacacattaagattgttattggt 85648  T
Q  124 gtgatttttcatcgaattcgcaa 146  Q
    |||||||||||||||||||||||    
T  85649 gtgatttttcatcgaattcgcaa 85671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 80175 - 80305
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||||| |||  ||||||||||| |||| ||||| |||||||  |||||||||||||||||| |||||    
T  80175 tctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttgctccacacatcaagtttgtt 80274  T
Q  118 attggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||| ||| |||||||||||||||||    
T  80275 attggtgtgttttctcatcgaattcgcaaca 80305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 1609 - 1493
Alignment:
Q  30 ttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatt 129  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||  ||||||||||||||||| |  |||||||||||| |    
T  1609 ttgttttctacttttggcttgtgtttataacttccatacactttg-tttggttgcttgattattacttgctccacacatcaaatatttattggtgtga-t 1512  T
Q  130 tttcatcgaattcgcaaca 148  Q
    |||||| |||||| |||||    
T  1511 tttcattgaattcacaaca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 11445 - 11315
Alignment:
Q  22 tctcgccgttgttttctacttttggcttgtatttataacttt--catacactttgttttg--gttgcttgattatcccttgctccacacatcaagttgtt 117  Q
    |||||| |||||||||||||||||||||||  |||||| | |  |||||||||| ||||   ||||||| ||||| |||| |||||||||||||||||||    
T  11445 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattccttactccacacatcaagttgtt 11346  T
Q  118 attggtgtgat-ttttcatcgaattcgcaac 147  Q
    ||||||||||| |||||||||||||||||||    
T  11345 attggtgtgatattttcatcgaattcgcaac 11315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 16619 - 16500
Alignment:
Q  28 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||||||||| ||||| |||||||||||||||| ||| |||||||||| | ||||||||||||  ||||||||||||||||||| | |||||||| |     
T  16619 cgttgttttctatttttg-cttgtatttataacttccatgcactttgtttag-ttgcttgattattacttgctccacacatcaagtattttattggtata 16522  T
Q  127 atttttcatcgaattcgcaacat 149  Q
    |||||| ||||||||| ||||||    
T  16521 attttt-atcgaattcacaacat 16500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 1 - 53
Alignment:
Q  87 gattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaa 139  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1 gattatctcttgctccacacatcaagttgttattggtgtgatttttcatcgaa 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 4317 - 4437
Alignment:
Q  31 tgttttctacttttggcttgtatttataact-ttc-atacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||||| | ||| ||||||||  ||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||     
T  4317 tgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgttattgatgtgt 4416  T
Q  128 tttttcatcgaattcgcaaca 148  Q
    |||  || ||||||| |||||    
T  4417 tttcacaacgaattcacaaca 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 5136 - 5241
Alignment:
Q  38 tacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatc 136  Q
    |||||||||||||  |||||||| | ||||||||||  ||| |||||||||||||  |||| |  | ||||||||| | ||| ||||||||||||||||     
T  5136 tacttttggcttgcgtttataacgtccatacacttttattttgttgcttgattattacttgtttgatacatcaagtattttaatggtgtgatttttcatt 5235  T
Q  137 gaattc 142  Q
    ||||||    
T  5236 gaattc 5241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 16605 - 16656
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 148  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||| |||||    
T  16605 ttgctccacgcatcaagtttttattggtgtga-ttttcatcgaattcacaaca 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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