View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12254_high_8 (Length: 297)
Name: NF12254_high_8
Description: NF12254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12254_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 7 - 286
Target Start/End: Original strand, 2667424 - 2667703
Alignment:
| Q |
7 |
catcgtgggtgactgagcgagnnnnnnnggaagatacttggattcaaggagttaaaatgttagaggttgacttgtttattttgcagtggctttatatggt |
106 |
Q |
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| T |
2667424 |
catcgtgggtgactgagtgagtttttttggaagatacttggattcaaggagttaaaatgttagaggttgacttgtttaatttgcagtggctttatatggt |
2667523 |
T |
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| Q |
107 |
ttttggaggaattaaaataatcatattttctaccaaatttcattgcttgacttgagcttatgttcatatgataactatattagctaaagaaattgatgat |
206 |
Q |
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| T |
2667524 |
ttttggaggaattaaaataatcatattttctaccaaatttcattggttgacttgagcttatgttcatatgataactatattagctaaagaaattgatgat |
2667623 |
T |
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| Q |
207 |
tcattcatctaaacttgatcttgatttagttgttttcttttaatgttttcgacattgttcctaactttctgcttgttctt |
286 |
Q |
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| T |
2667624 |
tcattcatctaaacttgatattgatttagttgtttccttttaatgttttcgacattgttcctaactttctgcttgttctt |
2667703 |
T |
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