View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12255_high_2 (Length: 464)

Name: NF12255_high_2
Description: NF12255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12255_high_2
NF12255_high_2
[»] chr8 (40 HSPs)
chr8 (17-463)||(15047035-15047482)
chr8 (362-464)||(4809106-4809208)
chr8 (357-456)||(33299004-33299103)
chr8 (362-464)||(2656012-2656114)
chr8 (362-464)||(37565719-37565821)
chr8 (362-464)||(43889964-43890066)
chr8 (362-463)||(27746955-27747055)
chr8 (383-464)||(44578172-44578253)
chr8 (369-464)||(34611946-34612041)
chr8 (362-464)||(11464313-11464415)
chr8 (362-464)||(23851334-23851436)
chr8 (362-464)||(43135419-43135521)
chr8 (383-464)||(42447888-42447969)
chr8 (362-464)||(9619197-9619299)
chr8 (362-460)||(11725826-11725924)
chr8 (362-464)||(14906763-14906865)
chr8 (361-463)||(33342577-33342679)
chr8 (362-463)||(28239984-28240085)
chr8 (363-464)||(43192188-43192289)
chr8 (362-454)||(44099776-44099868)
chr8 (362-464)||(9498439-9498541)
chr8 (362-464)||(11197025-11197127)
chr8 (362-452)||(11267162-11267252)
chr8 (362-464)||(29777361-29777463)
chr8 (361-464)||(33896224-33896331)
chr8 (383-464)||(9072860-9072941)
chr8 (383-464)||(32724342-32724423)
chr8 (383-464)||(35580598-35580679)
chr8 (357-449)||(16794448-16794540)
chr8 (362-464)||(8441327-8441428)
chr8 (362-463)||(39152982-39153084)
chr8 (419-464)||(19876352-19876397)
chr8 (384-464)||(15597030-15597110)
chr8 (362-434)||(3240540-3240611)
chr8 (405-464)||(17949377-17949434)
chr8 (17-96)||(15214978-15215057)
chr8 (362-453)||(24186519-24186609)
chr8 (389-432)||(43431913-43431956)
chr8 (328-357)||(9637194-9637223)
chr8 (328-357)||(17426995-17427024)
[»] chr6 (35 HSPs)
chr6 (362-464)||(33110746-33110848)
chr6 (362-464)||(10228814-10228916)
chr6 (362-464)||(16419293-16419395)
chr6 (362-464)||(4088595-4088697)
chr6 (362-464)||(4984407-4984509)
chr6 (362-464)||(8027958-8028060)
chr6 (362-464)||(16892656-16892758)
chr6 (362-464)||(17237126-17237228)
chr6 (362-464)||(17334888-17334990)
chr6 (362-464)||(35001725-35001827)
chr6 (368-464)||(12653079-12653175)
chr6 (362-464)||(12059613-12059715)
chr6 (393-464)||(7880973-7881044)
chr6 (361-464)||(8196246-8196349)
chr6 (362-464)||(8497102-8497205)
chr6 (362-464)||(23947157-23947260)
chr6 (398-464)||(4468693-4468759)
chr6 (362-460)||(28634953-28635051)
chr6 (362-464)||(33740418-33740520)
chr6 (362-454)||(25064381-25064473)
chr6 (402-464)||(7027998-7028060)
chr6 (363-463)||(25337701-25337801)
chr6 (393-464)||(7875915-7875986)
chr6 (403-464)||(20619602-20619663)
chr6 (362-447)||(30608375-30608459)
chr6 (398-463)||(34489357-34489421)
chr6 (374-464)||(1704004-1704093)
chr6 (430-464)||(12165974-12166008)
chr6 (419-452)||(4351902-4351935)
chr6 (363-432)||(7976048-7976117)
chr6 (328-357)||(19164838-19164867)
chr6 (328-357)||(31297093-31297122)
chr6 (329-357)||(12170742-12170770)
chr6 (362-446)||(29319737-29319821)
chr6 (383-451)||(33543485-33543553)
[»] chr4 (48 HSPs)
chr4 (362-464)||(25274030-25274132)
chr4 (365-464)||(10359391-10359490)
chr4 (362-464)||(9528717-9528819)
chr4 (362-464)||(44947559-44947661)
chr4 (383-464)||(43153875-43153956)
chr4 (362-464)||(4644005-4644107)
chr4 (362-464)||(9645364-9645466)
chr4 (362-464)||(38706550-38706652)
chr4 (362-464)||(51318132-51318234)
chr4 (370-464)||(52097764-52097858)
chr4 (362-464)||(53616490-53616592)
chr4 (383-463)||(27593690-27593770)
chr4 (362-464)||(34024278-34024380)
chr4 (362-464)||(43444539-43444641)
chr4 (362-464)||(45227881-45227983)
chr4 (362-464)||(49410370-49410472)
chr4 (363-464)||(1532055-1532156)
chr4 (383-464)||(10389615-10389696)
chr4 (383-455)||(12265618-12265690)
chr4 (383-463)||(18138775-18138855)
chr4 (383-463)||(49125988-49126068)
chr4 (398-464)||(868309-868376)
chr4 (393-464)||(6972957-6973028)
chr4 (362-456)||(9284066-9284160)
chr4 (362-464)||(21090289-21090391)
chr4 (398-464)||(50766388-50766454)
chr4 (362-464)||(56199243-56199345)
chr4 (363-464)||(2115429-2115530)
chr4 (397-464)||(32952626-32952693)
chr4 (398-463)||(1931627-1931692)
chr4 (362-463)||(35261340-35261441)
chr4 (362-455)||(46990971-46991064)
chr4 (383-464)||(49680684-49680765)
chr4 (362-462)||(3336004-3336104)
chr4 (389-456)||(35964843-35964910)
chr4 (398-464)||(47417809-47417875)
chr4 (362-464)||(20569402-20569506)
chr4 (419-464)||(29965782-29965827)
chr4 (364-464)||(37188437-37188537)
chr4 (419-464)||(14183949-14183993)
chr4 (419-451)||(7273711-7273743)
chr4 (428-460)||(31381578-31381610)
chr4 (325-357)||(56040430-56040462)
chr4 (328-357)||(2521072-2521101)
chr4 (328-357)||(26633458-26633487)
chr4 (328-357)||(56156435-56156464)
chr4 (328-360)||(35964750-35964782)
chr4 (328-360)||(47417945-47417977)
[»] chr1 (55 HSPs)
chr1 (362-464)||(11709547-11709649)
chr1 (362-464)||(45425906-45426008)
chr1 (362-464)||(25406124-25406226)
chr1 (362-464)||(38520375-38520477)
chr1 (368-464)||(50271986-50272082)
chr1 (389-464)||(30818218-30818293)
chr1 (362-464)||(5701398-5701500)
chr1 (362-464)||(7997928-7998030)
chr1 (362-464)||(9687045-9687147)
chr1 (362-464)||(19715735-19715837)
chr1 (370-463)||(18569159-18569252)
chr1 (361-464)||(50148509-50148612)
chr1 (362-464)||(40880853-40880955)
chr1 (362-464)||(51868485-51868587)
chr1 (362-464)||(51872002-51872104)
chr1 (383-464)||(28035278-28035359)
chr1 (362-463)||(50165939-50166040)
chr1 (384-464)||(5324420-5324500)
chr1 (362-464)||(19723452-19723554)
chr1 (362-464)||(33291258-33291360)
chr1 (383-464)||(3871547-3871628)
chr1 (362-461)||(20266444-20266543)
chr1 (365-463)||(7311949-7312047)
chr1 (362-464)||(7342861-7342963)
chr1 (362-464)||(9172629-9172731)
chr1 (362-464)||(9180611-9180713)
chr1 (362-464)||(11454074-11454178)
chr1 (363-455)||(39927396-39927488)
chr1 (361-464)||(9919528-9919630)
chr1 (396-463)||(14545657-14545724)
chr1 (361-444)||(48217596-48217679)
chr1 (362-464)||(27872876-27872978)
chr1 (362-464)||(32676975-32677072)
chr1 (362-464)||(34519267-34519369)
chr1 (362-464)||(45805669-45805770)
chr1 (383-464)||(33817029-33817110)
chr1 (383-464)||(33876499-33876580)
chr1 (362-464)||(35584462-35584560)
chr1 (383-464)||(40646813-40646894)
chr1 (362-463)||(41081544-41081645)
chr1 (361-461)||(31130432-31130532)
chr1 (383-464)||(27914965-27915046)
chr1 (398-463)||(39987528-39987592)
chr1 (369-464)||(30879214-30879309)
chr1 (361-448)||(31836989-31837076)
chr1 (383-463)||(48365627-48365707)
chr1 (363-432)||(19061071-19061140)
chr1 (362-447)||(47133051-47133135)
chr1 (368-447)||(32679007-32679085)
chr1 (328-362)||(24597109-24597143)
chr1 (328-357)||(3228548-3228577)
chr1 (328-357)||(21687654-21687683)
chr1 (362-411)||(27456667-27456716)
chr1 (362-447)||(37720009-37720093)
chr1 (370-411)||(39888365-39888406)
[»] chr5 (40 HSPs)
chr5 (361-464)||(43148864-43148967)
chr5 (368-464)||(781525-781621)
chr5 (361-464)||(4954129-4954232)
chr5 (362-464)||(7247096-7247198)
chr5 (362-464)||(27752062-27752164)
chr5 (383-464)||(19259673-19259754)
chr5 (363-456)||(34881862-34881955)
chr5 (368-464)||(18677311-18677407)
chr5 (368-463)||(15571045-15571140)
chr5 (362-464)||(27266699-27266801)
chr5 (362-464)||(30298981-30299083)
chr5 (362-453)||(7241932-7242023)
chr5 (362-464)||(3271242-3271344)
chr5 (369-464)||(16981427-16981524)
chr5 (361-464)||(28235722-28235827)
chr5 (362-464)||(41184280-41184382)
chr5 (383-464)||(2057699-2057780)
chr5 (362-463)||(20257536-20257637)
chr5 (383-463)||(42886616-42886696)
chr5 (389-464)||(10649781-10649856)
chr5 (389-464)||(21060150-21060225)
chr5 (398-464)||(26578389-26578455)
chr5 (368-457)||(11768143-11768232)
chr5 (383-464)||(19280807-19280887)
chr5 (362-450)||(7612898-7612986)
chr5 (389-464)||(35475205-35475280)
chr5 (389-464)||(30298344-30298421)
chr5 (398-464)||(42580025-42580091)
chr5 (383-464)||(7150196-7150277)
chr5 (362-463)||(22978764-22978865)
chr5 (362-445)||(43008155-43008238)
chr5 (362-464)||(7886779-7886880)
chr5 (419-464)||(43261716-43261761)
chr5 (405-464)||(41418605-41418664)
chr5 (363-455)||(13468744-13468835)
chr5 (361-446)||(11976794-11976878)
chr5 (362-447)||(13422077-13422161)
chr5 (370-446)||(25980302-25980377)
chr5 (328-360)||(37483320-37483352)
chr5 (370-446)||(38597942-38598017)
[»] scaffold0495 (1 HSPs)
scaffold0495 (362-464)||(5533-5635)
[»] chr2 (45 HSPs)
chr2 (362-463)||(9986182-9986283)
chr2 (361-464)||(8971467-8971570)
chr2 (394-464)||(4192976-4193046)
chr2 (362-464)||(8806005-8806107)
chr2 (362-464)||(27248991-27249093)
chr2 (363-464)||(32678952-32679052)
chr2 (361-464)||(27477287-27477390)
chr2 (357-464)||(32913379-32913486)
chr2 (393-464)||(34600353-34600424)
chr2 (362-464)||(84021-84123)
chr2 (362-464)||(41431167-41431269)
chr2 (363-464)||(38575326-38575427)
chr2 (384-464)||(2808334-2808414)
chr2 (361-464)||(4228261-4228365)
chr2 (369-464)||(7015558-7015653)
chr2 (370-464)||(21570256-21570350)
chr2 (388-464)||(33229006-33229082)
chr2 (362-464)||(3725319-3725421)
chr2 (362-464)||(40659772-40659874)
chr2 (362-463)||(17319460-17319561)
chr2 (361-464)||(41712628-41712731)
chr2 (362-464)||(20046922-20047024)
chr2 (362-464)||(27949565-27949667)
chr2 (403-464)||(6173771-6173832)
chr2 (383-464)||(45128343-45128424)
chr2 (362-464)||(25087176-25087277)
chr2 (391-456)||(459144-459209)
chr2 (419-464)||(36234147-36234192)
chr2 (362-464)||(22421867-22421969)
chr2 (362-464)||(40625897-40625999)
chr2 (362-433)||(31580495-31580566)
chr2 (357-464)||(37994422-37994528)
chr2 (405-463)||(9374450-9374508)
chr2 (361-447)||(30399889-30399974)
chr2 (393-455)||(37613997-37614059)
chr2 (328-359)||(17319590-17319621)
chr2 (371-436)||(3268684-3268749)
chr2 (328-357)||(4903933-4903962)
chr2 (362-463)||(7646617-7646717)
chr2 (328-357)||(31193124-31193153)
chr2 (370-411)||(32190854-32190895)
chr2 (398-463)||(37876503-37876567)
chr2 (328-357)||(38445449-38445478)
chr2 (325-357)||(17994505-17994537)
chr2 (361-417)||(30420855-30420911)
[»] chr3 (44 HSPs)
chr3 (361-464)||(25631365-25631468)
chr3 (362-464)||(25162568-25162670)
chr3 (362-464)||(39917238-39917340)
chr3 (362-464)||(49552064-49552166)
chr3 (361-464)||(29503593-29503696)
chr3 (362-464)||(36906254-36906356)
chr3 (362-464)||(38854876-38854978)
chr3 (362-464)||(44907239-44907341)
chr3 (362-464)||(3848759-3848861)
chr3 (362-464)||(32607601-32607703)
chr3 (383-456)||(12116238-12116311)
chr3 (383-464)||(17237937-17238018)
chr3 (362-463)||(22803163-22803264)
chr3 (393-464)||(4178697-4178768)
chr3 (365-464)||(42719649-42719748)
chr3 (363-464)||(30648560-30648661)
chr3 (362-463)||(46178701-46178802)
chr3 (368-456)||(21488233-21488321)
chr3 (362-464)||(46934774-46934873)
chr3 (362-464)||(35499040-35499140)
chr3 (393-464)||(50611289-50611360)
chr3 (419-464)||(2342595-2342640)
chr3 (368-461)||(14464645-14464738)
chr3 (398-463)||(36734569-36734634)
chr3 (419-464)||(51202151-51202196)
chr3 (361-464)||(21916605-21916708)
chr3 (367-464)||(25849941-25850038)
chr3 (398-451)||(37169374-37169427)
chr3 (362-434)||(50194195-50194267)
chr3 (362-411)||(51628988-51629037)
chr3 (363-463)||(4711610-4711709)
chr3 (328-360)||(38859922-38859954)
chr3 (361-411)||(6903105-6903155)
chr3 (393-463)||(31794203-31794272)
chr3 (362-432)||(43017046-43017116)
chr3 (328-357)||(953332-953361)
chr3 (328-357)||(19339447-19339476)
chr3 (328-357)||(23799735-23799764)
chr3 (362-447)||(27856309-27856393)
chr3 (363-412)||(30293348-30293397)
chr3 (328-357)||(40487597-40487626)
chr3 (370-463)||(44959841-44959933)
chr3 (328-357)||(46304308-46304337)
chr3 (370-446)||(40487470-40487545)
[»] chr7 (48 HSPs)
chr7 (362-464)||(433531-433633)
chr7 (362-464)||(32684803-32684905)
chr7 (363-464)||(17222841-17222942)
chr7 (363-463)||(35261433-35261533)
chr7 (389-464)||(1448697-1448772)
chr7 (361-464)||(22927709-22927812)
chr7 (362-464)||(42311415-42311515)
chr7 (361-463)||(13592348-13592450)
chr7 (362-464)||(26492500-26492602)
chr7 (362-464)||(46822150-46822252)
chr7 (362-464)||(26583844-26583947)
chr7 (362-464)||(48208035-48208138)
chr7 (362-464)||(2843081-2843183)
chr7 (362-464)||(7640615-7640717)
chr7 (361-463)||(20083474-20083576)
chr7 (362-464)||(20116717-20116818)
chr7 (369-463)||(31235631-31235725)
chr7 (357-463)||(32521764-32521870)
chr7 (362-464)||(34773846-34773948)
chr7 (383-464)||(35496036-35496117)
chr7 (398-464)||(19560133-19560199)
chr7 (362-464)||(21266525-21266627)
chr7 (362-464)||(23085656-23085758)
chr7 (362-464)||(23786710-23786812)
chr7 (362-464)||(35667072-35667174)
chr7 (362-464)||(45198873-45198975)
chr7 (362-464)||(1485096-1485199)
chr7 (393-464)||(6559012-6559083)
chr7 (389-464)||(42066929-42067004)
chr7 (389-463)||(17499548-17499622)
chr7 (389-463)||(17553592-17553666)
chr7 (383-463)||(46818279-46818360)
chr7 (380-463)||(6002165-6002246)
chr7 (393-456)||(23425244-23425307)
chr7 (362-464)||(46339189-46339291)
chr7 (420-464)||(14627777-14627821)
chr7 (405-463)||(17611245-17611303)
chr7 (370-447)||(38798928-38799004)
chr7 (328-359)||(46244038-46244069)
chr7 (383-453)||(27341691-27341760)
chr7 (328-362)||(42978876-42978910)
chr7 (328-362)||(42979049-42979083)
chr7 (362-456)||(43369614-43369707)
chr7 (328-357)||(4999805-4999834)
chr7 (383-432)||(5348473-5348522)
chr7 (328-357)||(12141094-12141123)
chr7 (328-357)||(46821528-46821557)
chr7 (328-357)||(48061697-48061726)
[»] scaffold0311 (1 HSPs)
scaffold0311 (398-464)||(8826-8892)
[»] scaffold0146 (1 HSPs)
scaffold0146 (383-464)||(16181-16262)
[»] scaffold0014 (1 HSPs)
scaffold0014 (401-464)||(201252-201315)
[»] scaffold0022 (1 HSPs)
scaffold0022 (362-461)||(83276-83377)
[»] scaffold0426 (1 HSPs)
scaffold0426 (383-460)||(6444-6521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (389-456)||(361666-361733)
[»] scaffold0445 (1 HSPs)
scaffold0445 (370-446)||(1490-1565)
[»] scaffold0002 (1 HSPs)
scaffold0002 (418-456)||(454056-454094)
[»] scaffold0136 (1 HSPs)
scaffold0136 (328-357)||(38333-38362)
[»] scaffold0009 (1 HSPs)
scaffold0009 (362-447)||(57948-58032)


Alignment Details
Target: chr8 (Bit Score: 363; Significance: 0; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 17 - 463
Target Start/End: Complemental strand, 15047482 - 15047035
Alignment:
Q  17 aaaaaatacaaatattgggttagagacccattttctctagcaagtgacaatattaact-cattataatcatgacttaccttatcctcttcactagnnnnn 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||         
T  15047482 aaaaaatacaaatattgggttagagacccattttctctagcaagtgacaatattaacttcattataatcatgacttaccttatcctcttcactagttttt 15047383  T
Q  116 nngtggtttccattcatatgtatgtgatcttttgaagccattagaggagaacacaattattagcatgaaagtattgttcttaaccagctactgtattatt 215  Q
      ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15047382 ttgtggtttccattcatatgtgtgtgatcttttgaagccattagaggagaacacaattattagcatgaaagtattgttcttaaccagctacagtattatt 15047283  T
Q  216 tatagttaggaagttttgtttaatattttacaaaataacacaattgcaataaacaatacttcacgagaaccttgtgaaatgtattttaaatggtatacct 315  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15047282 tatagctaggaagttttgtttaatattttacaaaataacacaattgcaataaacaatacttcacgagaaccttgtgaaatgtattctaaatggtatacct 15047183  T
Q  316 gctctacccttgtttttacaaaaacaaaacgatattcattcaaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgac 415  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||  ||||||||||||||| ||    
T  15047182 gctctacccctgtttttacaaaaacaaaacgatattcattcaaatcgtaaaagatgaatctgcgaacaaacttacaacattcaagttaatagcatataac 15047083  T
Q  416 ggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  15047082 ggtataatgcctacaaaaatatatgataaaattaaagtaatcggaata 15047035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 4809208 - 4809106
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  4809208 gtaaaggatgaatctgcgaacaaactcacaacatctaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 4809109  T
Q  462 tat 464  Q
    |||    
T  4809108 tat 4809106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 357 - 456
Target Start/End: Complemental strand, 33299103 - 33299004
Alignment:
Q  357 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||    
T  33299103 aaattgtaaatgatgaatctgcgaacaaactcacaacatctaagttaatagcatataacggcataatgcctataaaaatatatgataaaattaaagtgac 33299004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 2656114 - 2656012
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||||    
T  2656114 gtaaatgatgaatttgcgaacaaactcacagcatccaagttaatagcatataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 2656015  T
Q  462 tat 464  Q
    |||    
T  2656014 tat 2656012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 37565719 - 37565821
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||||||    
T  37565719 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaatagcatataacagcataatgcctacaaaaatatatgataaaatcaaagtgaccggaa 37565818  T
Q  462 tat 464  Q
    |||    
T  37565819 tat 37565821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 43889964 - 43890066
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| |||||| ||| | ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  43889964 gtaaaggatgaatctgcaaacaaaatcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 43890063  T
Q  462 tat 464  Q
    |||    
T  43890064 tat 43890066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 27746955 - 27747055
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| |||||||||| |||||||||| ||||||||||||||| |||  |||||||||||||||||||||||| |||| |||||||||||||    
T  27746955 gtaaatgatgaatctgcaaataaatttacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgat-aaataaaagtgaccggaa 27747053  T
Q  462 ta 463  Q
    ||    
T  27747054 ta 27747055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 44578253 - 44578172
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||| |||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  44578253 aaacttacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 44578172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 369 - 464
Target Start/End: Complemental strand, 34612041 - 34611946
Alignment:
Q  369 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||| ||| || ||||| |||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  34612041 atgaatctgcgaacaaactcacaacatccaagttaatagcatataacaagataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 34611946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 11464415 - 11464313
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| | | || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  11464415 gtaaaggatgaatctacgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 11464316  T
Q  462 tat 464  Q
    |||    
T  11464315 tat 11464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 23851334 - 23851436
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||| ||| ||| || ||||| |||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||| |||| ||    
T  23851334 gtaaaagataaatctgcgaacaaactcacaacatctaagttaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagttaccgaaa 23851433  T
Q  462 tat 464  Q
    |||    
T  23851434 tat 23851436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 43135419 - 43135521
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || | ||| |||||||| ||||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  43135419 gtaaatgatgaatttgcgaacatactcacaacatccaagttaataacatataacggcataatgcctacgaaaatatatgataaaattaaagtgaccagaa 43135518  T
Q  462 tat 464  Q
    |||    
T  43135519 tat 43135521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 42447888 - 42447969
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  42447888 aaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgtctggaatat 42447969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 9619197 - 9619299
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||| | |||||||||||||||| ||||||||||||||||||    
T  9619197 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatacttacaaaaatatatgatgaaattaaagtgaccggaa 9619296  T
Q  462 tat 464  Q
    |||    
T  9619297 tat 9619299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 460
Target Start/End: Complemental strand, 11725924 - 11725826
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  11725924 gtaaaggatgaatctgtgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaactaaagtgaccgga 11725826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 14906763 - 14906865
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||  ||| ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  14906763 gtaaaggatgaatctgcgaacaaactcacaggatccaagttaatagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 14906862  T
Q  462 tat 464  Q
    |||    
T  14906863 tat 14906865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 463
Target Start/End: Complemental strand, 33342679 - 33342577
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| || ||||| ||| |||  ||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| ||    
T  33342679 tgtaaatgatgaatctgcgaacaaactcacagcattcaagttaatagcatataacggcataatgcctacaaatatatatgataaaattaaagtgacctga 33342580  T
Q  461 ata 463  Q
    |||    
T  33342579 ata 33342577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 28240085 - 28239984
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| ||||||||||||||| |||| |||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  28240085 gtaaaggatgaatctgtgaacaaactcacagcatctaagttaatagaatataacggcataatgcttacaaaaataaatgataaaattaaagtgaccggaa 28239986  T
Q  462 ta 463  Q
    ||    
T  28239985 ta 28239984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 363 - 464
Target Start/End: Original strand, 43192188 - 43192289
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || ||||| | |||||| ||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||| ||||||    
T  43192188 taaaggatgaatctgcgaacaaactcagaacatccaagttaatagcatataacggcataatggatacaaaaatatatgataaaattaaagtgatcggaat 43192287  T
Q  463 at 464  Q
    ||    
T  43192288 at 43192289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 454
Target Start/End: Original strand, 44099776 - 44099868
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtg 454  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  44099776 gtaaaggatgaatctgctaacaaactcacaacatccaagttaatagcatataacgacataatgcatacaaaaatatatgataaaattaaagtg 44099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 9498439 - 9498541
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| | || |||||||||||||||||||||||| ||||||||||||| ||||    
T  9498439 gtaaaggatgaatctgtgaacaaactcacagcatccaagttaatagcatataatggcataatgcctacaaaaatatatgatgaaattaaagtgacaggaa 9498538  T
Q  462 tat 464  Q
    |||    
T  9498539 tat 9498541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 11197127 - 11197025
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||| ||| || ||| ||||| ||| |||| ||||||||||||||| || | ||||||||||||||||||||| ||||||||||||||| |||||    
T  11197127 gtaaatgataaatctgtaaacaaactcacagcatccaagttaatagcatataacagcataatgcctacaaaaatatataataaaattaaagtgatcggaa 11197028  T
Q  462 tat 464  Q
    |||    
T  11197027 tat 11197025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 452
Target Start/End: Complemental strand, 11267252 - 11267162
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaag 452  Q
    ||||| ||||||  ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  11267252 gtaaaggatgaaactgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaag 11267162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 29777463 - 29777361
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  ||||||||| |||||||||||||||| |||||||| |||||||    
T  29777463 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacgacataatgcctccaaaaatatatgataatattaaagtcaccggaa 29777364  T
Q  462 tat 464  Q
    |||    
T  29777363 tat 29777361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 33896331 - 33896224
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatat----gataaaattaaagtgac 456  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| || | |||||||||||||||||||||    |||||||||||||| ||    
T  33896331 tgtaaaggatgaatctgcgaaaaaactcacaacatccaagttaatagcatataacagcataatgcctacaaaaatatatgatagataaaattaaagtcac 33896232  T
Q  457 cggaatat 464  Q
    ||||||||    
T  33896231 cggaatat 33896224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 9072941 - 9072860
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  9072941 aaactcacagcatccaagttaatagcatataacggaataatgcatacaaaaatatatgataaaattaaagtcatcggaatat 9072860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 32724342 - 32724423
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||| |||||||||| |||| |||  |||||||||||||||||||| ||||| |||||||||||||||||||    
T  32724342 aaactcacaacatccaagttaatagtatataacgacataatgcctacaaaaatataagataagattaaagtgaccggaatat 32724423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 35580679 - 35580598
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| || |||||||| |||||||| ||| | || |||||||||||||||||||||||||||| |||||||||||||||||    
T  35580679 aaactcactacatctaaattaatagcgtataatggcataatgcctacaaaaatatatgataaaactaaagtgaccggaatat 35580598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 449
Target Start/End: Complemental strand, 16794540 - 16794448
Alignment:
Q  357 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaatta 449  Q
    |||| ||||| ||||||| ||| || ||||| |||||||| ||||||||| ||||| |||  |||||| ||||||||||||||||||||||||    
T  16794540 aaatagtaaaggatgaatctgcgaacaaactcacaacatccaagttaataccatataacgtcataatgtctacaaaaatatatgataaaatta 16794448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 8441428 - 8441327
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    |||||||||||||||||||||||||| | | ||||||| |||||||||||  ||| || ||| ||| |||| | |||||||||||||||||| | |||||    
T  8441428 gtaaaagatgaatttgcaaataaactcatatcatctaaattaatagcatacaacgataaaatacctgcaaata-atatgataaaattaaagttatcggaa 8441330  T
Q  462 tat 464  Q
    |||    
T  8441329 tat 8441327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 39152982 - 39153084
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaa-atatatgataaaattaaagtgaccgga 460  Q
    ||||| ||||||| ||| || |||||   ||||||||||||||||||| || ||   ||||||||||||||| |||||||||||||||||||||| ||||    
T  39152982 gtaaaggatgaatctgcgaacaaactcttaacatctaagttaatagcacataacaacataatgcctacaaaaaatatatgataaaattaaagtgatcgga 39153081  T
Q  461 ata 463  Q
    |||    
T  39153082 ata 39153084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 19876397 - 19876352
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  19876397 ataatgcctacaaaaatatatgatcaaattaaagtgaccggaatat 19876352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 15597030 - 15597110
Alignment:
Q  384 aacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||  ||||||||||||||  ||  ||||||| ||||||| ||||||| |||||||||||||||| |||||    
T  15597030 aacttacaacatccgagttaatagcatatatcgacataatgcatacaaaagtatatgagaaaattaaagtgaccgaaatat 15597110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 434
Target Start/End: Complemental strand, 3240611 - 3240540
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaa 434  Q
    ||||| ||||||| ||| |||||||| |||||||| ||||||||||||||| |||| | |||| |||||||||    
T  3240611 gtaaaggatgaatctgcgaataaactcacaacatccaagttaatagcatataacggcaaaatg-ctacaaaaa 3240540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 464
Target Start/End: Complemental strand, 17949434 - 17949377
Alignment:
Q  405 tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| || | ||||||||||||||  |||||||||||||||||||||||| |||||    
T  17949434 tagcatataacagcataatgcctacaaa--tatatgataaaattaaagtgaccgtaatat 17949377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 15214978 - 15215057
Alignment:
Q  17 aaaaaatacaaatattgggttagagacccattttctctagcaagtgacaatattaactcattataatcatgacttacctt 96  Q
    |||||||||| |||||| ||   | ||||||||||||||| ||||||||| ||||  | |||||||||||| ||||||||    
T  15214978 aaaaaatacatatattgagtctcacacccattttctctaggaagtgacaagattaggttattataatcatggcttacctt 15215057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 453
Target Start/End: Original strand, 24186519 - 24186609
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagt 453  Q
    ||||||||||||| ||| || ||||| | |||| |||||||||||| ||| ||||| | |||||||| ||| | ||||||||||||| ||||    
T  24186519 gtaaaagatgaatctgctaacaaactcataacacctaagttaatagtatacgacggcaaaatgcctataaata-atatgataaaatttaagt 24186609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 432
Target Start/End: Complemental strand, 43431956 - 43431913
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaa 432  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||    
T  43431956 acaacatccaagttaatagcatatgacggtaaaatgcttacaaa 43431913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 9637194 - 9637223
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  9637194 tttttacaaaaacaaaacgatattcattca 9637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 17426995 - 17427024
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  17426995 tttttacaaaaacaaaacgatattcattca 17427024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 33110848 - 33110746
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| |||||||||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  33110848 gtaaaggatgaatatgcaaataaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 33110749  T
Q  462 tat 464  Q
    |||    
T  33110748 tat 33110746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 10228916 - 10228814
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || |||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  10228916 gtaaaggatgaatttgcgaacaaacttacagtatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 10228817  T
Q  462 tat 464  Q
    |||    
T  10228816 tat 10228814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 16419395 - 16419293
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||||||| ||| || ||||| ||||||   |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  16419395 gtaaaagatgaatctgcgaacaaactcacaacaatcaagttaatagcatatgacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 16419296  T
Q  462 tat 464  Q
    |||    
T  16419295 tat 16419293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 4088697 - 4088595
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  4088697 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatggcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaa 4088598  T
Q  462 tat 464  Q
    |||    
T  4088597 tat 4088595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 4984407 - 4984509
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||||||| |||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||| |||||    
T  4984407 gtaaaggatgaatctgcgaacaaacttacatcatctaagttaatagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgatcggaa 4984506  T
Q  462 tat 464  Q
    |||    
T  4984507 tat 4984509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 8027958 - 8028060
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||||    
T  8027958 gtaaaggatgaatttgcgaacaaactcacatcatcaaagttaatagcatataatggcataatgcctacaaaaatatatgataaaattaaagtgactggaa 8028057  T
Q  462 tat 464  Q
    |||    
T  8028058 tat 8028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 16892656 - 16892758
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||| | ||| || |||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  16892656 gtaaatgatgattctgcgaacaaacttacgacatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 16892755  T
Q  462 tat 464  Q
    |||    
T  16892756 tat 16892758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 17237126 - 17237228
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || | ||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  17237126 gtaaaggatgaatctgcgaacacactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 17237225  T
Q  462 tat 464  Q
    |||    
T  17237226 tat 17237228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 17334990 - 17334888
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  17334990 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgactggaa 17334891  T
Q  462 tat 464  Q
    |||    
T  17334890 tat 17334888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 35001827 - 35001725
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||| ||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  35001827 gtaaaggattaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 35001728  T
Q  462 tat 464  Q
    |||    
T  35001727 tat 35001725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 12653175 - 12653079
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  12653175 gatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcgtacaaaaatatatgataaaattaaagcgaccggaatat 12653079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 12059613 - 12059715
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  ||||| |||||||||| ||||||||||||||||||||||||||    
T  12059613 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataattcctacaaaaaaatatgataaaattaaagtgaccggaa 12059712  T
Q  462 tat 464  Q
    |||    
T  12059713 tat 12059715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 7880973 - 7881044
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  7880973 catccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 7881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 361 - 464
Target Start/End: Original strand, 8196246 - 8196349
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||||||| || | ||| ||| |||| ||||||||||||||| |||  |||||||||||||||||||  |||||||||||||||||||||    
T  8196246 tgtaaaggatgaatttgcgaacacactcacagcatccaagttaatagcatataacgacataatgcctacaaaaatatgcgataaaattaaagtgaccgga 8196345  T
Q  461 atat 464  Q
    ||||    
T  8196346 atat 8196349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 8497205 - 8497102
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctaca-aaaatatatgataaaattaaagtgaccgga 460  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||    
T  8497205 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaaatatatgatgaaattaaagtgaccgga 8497106  T
Q  461 atat 464  Q
    ||||    
T  8497105 atat 8497102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 23947157 - 23947260
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa-ttaaagtgaccgga 460  Q
    ||||| ||||||| | | || ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||    
T  23947157 gtaaaggatgaatctacgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaatttaaagtgaccaga 23947256  T
Q  461 atat 464  Q
    ||||    
T  23947257 atat 23947260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 4468759 - 4468693
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  4468759 aagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtggccggaatat 4468693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 460
Target Start/End: Original strand, 28634953 - 28635051
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    ||||| ||||||| ||  || ||||| |||||||| |||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||||||    
T  28634953 gtaaaggatgaatctgtgaacaaactcacaacatccaagttaatcgcatataacggcataatgcctacaaaaatacatgataaaattaaagtgaccgga 28635051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 33740418 - 33740520
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||  ||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||    
T  33740418 gtaaaggatgaatctgcgaacaaactcacattatccaagttaatagcatataacggcataatgcctataaaaatatatgataaaattaaagtgaccgaaa 33740517  T
Q  462 tat 464  Q
    |||    
T  33740518 tat 33740520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 25064473 - 25064381
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtg 454  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||    
T  25064473 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtg 25064381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 7028060 - 7027998
Alignment:
Q  402 taatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  7028060 taatagcatataacgccataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 7027998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 25337801 - 25337701
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || ||||||||| |||  ||||||||| ||||| ||  ||||||||||||||||||||||||||||||||| ||||| |||||    
T  25337801 taaatgatgaatgtgcgaacaaacttacaccattcaagttaatatcatataacaatataatgcctacaaaaatatatgataaaattaaggtgactggaat 25337702  T
Q  463 a 463  Q
    |    
T  25337701 a 25337701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 7875915 - 7875986
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| ||||||||||||||| || | |||||||||||||||||||||||| |||||||||||| ||||||||    
T  7875915 catccaagttaatagcatataactgcataatgcctacaaaaatatatgatgaaattaaagtgatcggaatat 7875986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 464
Target Start/End: Complemental strand, 20619663 - 20619602
Alignment:
Q  403 aatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||| |||  ||||| | ||||||||||||||||||||||||||||||||||||||    
T  20619663 aatagcatataacgacataattcatacaaaaatatatgataaaattaaagtgaccggaatat 20619602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 447
Target Start/End: Original strand, 30608375 - 30608459
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    ||||| |||||||||||||| || || |||||||| ||||||||||||||  |||||| |||||||||||| | ||||||||||||    
T  30608375 gtaaaggatgaatttgcaaacaatctcacaacatccaagttaatagcatacaacggtaaaatgcctacaaata-atatgataaaat 30608459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 34489421 - 34489357
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||||||||||| |||  |||||| ||||||||||||| ||||||||||||||||||||||||    
T  34489421 aagttaatagcatataacgacataatggctacaaaaatata-gataaaattaaagtgaccggaata 34489357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 464
Target Start/End: Original strand, 1704004 - 1704093
Alignment:
Q  374 tttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||||||||||| |||||||||||| ||  |||  | |||| ||| ||| | |||||||| |||||||||||| |||||||    
T  1704004 tttgcaaataaacttacaacatttaagttaatagcgtacaacgacaaaatgtctataaata-atatgatacaattaaagtgactggaatat 1704093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 464
Target Start/End: Complemental strand, 12166008 - 12165974
Alignment:
Q  430 aaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||||||||||||||||||||||||    
T  12166008 aaaaatatatgataaaattaaagtgaccggaatat 12165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 452
Target Start/End: Original strand, 4351902 - 4351935
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaag 452  Q
    |||||||||||||||||||||||||| |||||||    
T  4351902 ataatgcctacaaaaatatatgataacattaaag 4351935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 7976048 - 7976117
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaa 432  Q
    |||| ||||||| ||| || ||||| |||||| ||||||||||||||||  |||| | ||||||||||||    
T  7976048 taaaggatgaatatgcgaacaaactcacaacacctaagttaatagcatacaacggcaaaatgcctacaaa 7976117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 19164867 - 19164838
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  19164867 tttttacaaaaacaaaacgatattcattca 19164838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 31297122 - 31297093
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  31297122 tttttacaaaaacaaaacgatattcattca 31297093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 12170770 - 12170742
Alignment:
Q  329 ttttacaaaaacaaaacgatattcattca 357  Q
    |||||||||||||||||||||||||||||    
T  12170770 ttttacaaaaacaaaacgatattcattca 12170742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 446
Target Start/End: Original strand, 29319737 - 29319821
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 446  Q
    ||||||| ||||| ||| || ||||| | |||| | ||||||||||||||  |||||| ||||| |||||||  |||||||||||    
T  29319737 gtaaaaggtgaatctgcgaacaaactcataacaaccaagttaatagcatacaacggtaaaatgcttacaaaataatatgataaaa 29319821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 33543485 - 33543553
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaa 451  Q
    ||||| ||||||||  ||||||||| ||||  |  ||||||| |||||||||||||| |||||||||||    
T  33543485 aaactcacaacatccgagttaatagtatatagcaatataatgtctacaaaaatatataataaaattaaa 33543553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 6e-32; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 25274132 - 25274030
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  25274132 gtaaaggatgaatctgcgaacaaactcacaacatctaagttaatagcatataacagcataatgcctacaaaaatatatgataaaattaaagtgaccggaa 25274033  T
Q  462 tat 464  Q
    |||    
T  25274032 tat 25274030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 365 - 464
Target Start/End: Original strand, 10359391 - 10359490
Alignment:
Q  365 aaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  10359391 aaagatgaatttgcgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaaataaagtgactggaatat 10359490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 9528717 - 9528819
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||  ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  9528717 gtaaaggatgaatctgcgaacaaactcacaacattcaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 9528816  T
Q  462 tat 464  Q
    |||    
T  9528817 tat 9528819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 44947661 - 44947559
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  44947661 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacatataacggcacaatgcctacaaaaatatatgataaaattaaagtgaccggaa 44947562  T
Q  462 tat 464  Q
    |||    
T  44947561 tat 44947559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 43153875 - 43153956
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43153875 aaactcacaacatccaagttaacagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 43153956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 4644107 - 4644005
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || || || |||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  4644107 gtaaaggatgaatctgcgaacaagctcacaacatccaagttaatagcatataacggcataatgcctacaataatatatgataaaattaaattgaccggaa 4644008  T
Q  462 tat 464  Q
    |||    
T  4644007 tat 4644005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 9645364 - 9645466
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  9645364 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatacctacaaaagtatatgataaaattaaagtgaccggaa 9645463  T
Q  462 tat 464  Q
    |||    
T  9645464 tat 9645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 38706550 - 38706652
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||| ||    
T  38706550 gtaaaagatgaatctgcgaacaaactcacatcatccaagttaatagcatataacgacataatgtctacaaaaatatatgataaaattaaagtgaccgaaa 38706649  T
Q  462 tat 464  Q
    |||    
T  38706650 tat 38706652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 51318234 - 51318132
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  51318234 gtaaaggatgaatctgtgaacaaactcacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 51318135  T
Q  462 tat 464  Q
    |||    
T  51318134 tat 51318132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 370 - 464
Target Start/End: Original strand, 52097764 - 52097858
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||||||| |||||||| ||||||||| ||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  52097764 tgaatatgcgaataaactcacaacatccaagttaataccatataacgtcataatgcctacaaagatatatgataaaattaaagtgaccggaatat 52097858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 53616490 - 53616592
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||    
T  53616490 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatataatgaaattaaagtgaccggaa 53616589  T
Q  462 tat 464  Q
    |||    
T  53616590 tat 53616592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 27593690 - 27593770
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||| |||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  27593690 aaactcacaacatccaagttaatagcatataacggcataattcctacaaaaatatatgataaaattaaagtgacaggaata 27593770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 34024278 - 34024380
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| ||   ||||||| ||||||||||||||||||||||||| |||||||||    
T  34024278 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacaacataatgcttacaaaaatatatgataaaattaaaatgaccggaa 34024377  T
Q  462 tat 464  Q
    |||    
T  34024378 tat 34024380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 43444641 - 43444539
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||  || |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  43444641 gtaaaggatgaatctgcgaacaaactcacagcattcaaattaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 43444542  T
Q  462 tat 464  Q
    |||    
T  43444541 tat 43444539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 45227881 - 45227983
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| | | || ||||| |||||||| ||||||||| ||||| || | |||||||| ||||||||||||||||||||||||||||||||||    
T  45227881 gtaaaggatgaatctacgaacaaactcacaacatccaagttaataacatataaccgcataatgcccacaaaaatatatgataaaattaaagtgaccggaa 45227980  T
Q  462 tat 464  Q
    |||    
T  45227981 tat 45227983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 49410472 - 49410370
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| |||||||  || || ||||| ||| |||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  49410472 gtaaaggatgaatcagcgaacaaactcacatcatccaagttaataacatataacggcataatgcctacaaaaatatatgataaaattaaagtgacaggaa 49410373  T
Q  462 tat 464  Q
    |||    
T  49410372 tat 49410370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 363 - 464
Target Start/End: Complemental strand, 1532156 - 1532055
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || || || |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| || ||||    
T  1532156 taaaggatgaatctgcgaacaagctcacaacatccaagttaatagcatataacggcataatgtctacaaaaatatatgataaaattaaagtgtccagaat 1532057  T
Q  463 at 464  Q
    ||    
T  1532056 at 1532055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 10389615 - 10389696
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  10389615 aaactcacagcatccaagttaatagcatataacggcataatgtctacaaaaatatatgataaaattaaagtgatcggaatat 10389696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 12265690 - 12265618
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtga 455  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  12265690 aaactcacaacatcaaagttaatagcatataacggcataatgcctaaaaaaatatatgataaaattaaagtga 12265618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 18138775 - 18138855
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||| |||||||    
T  18138775 aaactcacaacatccaagttaatagcatataacggcataatgactacaaaaatatatgataaaatttaagtgatcggaata 18138855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 49125988 - 49126068
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||| |||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||| |||||||    
T  49125988 aaactcacaacatccaagttaatagcatataacggcataatgactacaaaaatatatgataaaatttaagtgatcggaata 49126068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 868376 - 868309
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctac-aaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  868376 aagttaatagcatataacggcataatgcctaccaaaaatatatgataaaattaaagtgaccggaatat 868309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 6973028 - 6972957
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  6973028 catccaagttaatagcatataacggcataatacctacaaaaatatatgataaaattaaagtcaccggaatat 6972957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 456
Target Start/End: Complemental strand, 9284160 - 9284066
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    ||||||||||||| | | || ||||| |||||||| | | ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  9284160 gtaaaagatgaatctacgaacaaactcacaacatccatgataatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgac 9284066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 21090391 - 21090289
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| |||||| ||||| |||  ||| ||||||||| ||||| |||  ||||||||||||||| || ||||||||||||||||||||||||    
T  21090391 gtaaaggatgaatctgcaaacaaactcacactatccaagttaataacatataacgacataatgcctacaaaagtagatgataaaattaaagtgaccggaa 21090292  T
Q  462 tat 464  Q
    |||    
T  21090291 tat 21090289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 50766388 - 50766454
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||| || | |||||||||||||||||||||||| |||||||||||||||||||||    
T  50766388 aagttaatagcatataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 50766454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 56199345 - 56199243
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||| | |||| |||||| |||||||||||||||||||||||||||| | |||||    
T  56199345 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatgtaacggcataatgtctacaaaaatatatgataaaattaaagtcatcggaa 56199246  T
Q  462 tat 464  Q
    |||    
T  56199245 tat 56199243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 363 - 464
Target Start/End: Original strand, 2115429 - 2115530
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || ||||| |||  ||| ||||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||| |||||    
T  2115429 taaaggatgaatctgcgaacaaactcacagtatccaagttaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgactggaat 2115528  T
Q  463 at 464  Q
    ||    
T  2115529 at 2115530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 32952626 - 32952693
Alignment:
Q  397 taagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||||| |||  |||||||||||||||||||| |||||||||||| ||||||||||||    
T  32952626 taagttaatagcatataacgacataatgcctacaaaaatataagataaaattaaattgaccggaatat 32952693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 1931627 - 1931692
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||| ||||||    
T  1931627 aagttaatagcatataacgacattatgcctacaaaaatatatgataaaattaaagtgactggaata 1931692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 35261441 - 35261340
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| |||||| ||||| |||||||| ||||||||||||||| |  | |||||| ||||||| |||| ||||||||||||| |||||| ||    
T  35261441 gtaaaggatgaatctgcaaacaaactcacaacatccaagttaatagcatataagtgcataatgtctacaaacatatctgataaaattaaaatgaccgaaa 35261342  T
Q  462 ta 463  Q
    ||    
T  35261341 ta 35261340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 46990971 - 46991064
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtga 455  Q
    ||||| ||||||| ||| || ||||| |||||||  ||||||| ||||||  |||  |||||||||||||||||||||||||||||||||||||    
T  46990971 gtaaatgatgaatctgcgaacaaactcacaacattcaagttaacagcatagaacgacataatgcctacaaaaatatatgataaaattaaagtga 46991064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 49680765 - 49680684
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||  ||||||||| ||||| |||  |||||||||||||||||||||||| ||||||||||||||| |||||    
T  49680765 aaactcacaacattcaagttaataacatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccgaaatat 49680684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 462
Target Start/End: Original strand, 3336004 - 3336104
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| |||||| ||||| | |||||  |||||| |||||||| ||||  ||||||||||||| |||||||||||||||||| ||| |||||    
T  3336004 gtaaaggatgaatctgcaaacaaactcaaaacattcaagttattagcatataacggcgtaatgcctacaaatatatatgataaaattaaaatgatcggaa 3336103  T
Q  462 t 462  Q
    |    
T  3336104 t 3336104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 389 - 456
Target Start/End: Original strand, 35964843 - 35964910
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||||||| ||||||||||||||| ||   ||||| ||||||||||||||||||||||||||||||||    
T  35964843 acaacatccaagttaatagcatataacaacataattcctacaaaaatatatgataaaattaaagtgac 35964910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 47417875 - 47417809
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||  |||||||    
T  47417875 aagttaataacatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaatggaatat 47417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 20569506 - 20569402
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaat--atatgataaaattaaagtgaccgg 459  Q
    ||||| ||||||| ||| || ||||| |||  ||| ||||||||||||||| ||   |||||||||||||||||  ||||||| ||||||||||||||||    
T  20569506 gtaaaggatgaatctgcgaacaaactcacattatccaagttaatagcatataacaacataatgcctacaaaaatatatatgatgaaattaaagtgaccgg 20569407  T
Q  460 aatat 464  Q
    |||||    
T  20569406 aatat 20569402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 29965827 - 29965782
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  29965827 ataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 29965782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 464
Target Start/End: Original strand, 37188437 - 37188537
Alignment:
Q  364 aaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||| ||| ||| || | ||| ||| |||| ||||||||||||||| | |  | ||||||||||||| |||||||||||||||||||||| ||||||    
T  37188437 aaaagataaatctgcgaacacactcacagcatccaagttaatagcatataatgacacaatgcctacaaaattatatgataaaattaaagtgacaggaata 37188536  T
Q  464 t 464  Q
    |    
T  37188537 t 37188537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 14183993 - 14183949
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||||| || ||||||||||||||||||||||||||    
T  14183993 ataatgcctacaaaaa-atttgataaaattaaagtgaccggaatat 14183949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 451
Target Start/End: Original strand, 7273711 - 7273743
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaa 451  Q
    |||||||||||||||||||||||||||||||||    
T  7273711 ataatgcctacaaaaatatatgataaaattaaa 7273743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 460
Target Start/End: Original strand, 31381578 - 31381610
Alignment:
Q  428 acaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||||||||||||||||||||||||||||||    
T  31381578 acaaaaatatatgataaaattaaagtgaccgga 31381610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 56040430 - 56040462
Alignment:
Q  325 ttgtttttacaaaaacaaaacgatattcattca 357  Q
    |||||||||||||||||||||||||||||||||    
T  56040430 ttgtttttacaaaaacaaaacgatattcattca 56040462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 2521101 - 2521072
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  2521101 tttttacaaaaacaaaacgatattcattca 2521072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 26633458 - 26633487
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  26633458 tttttacaaaaacaaaacgatattcattca 26633487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 56156435 - 56156464
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  56156435 tttttacaaaaacaaaacgatattcattca 56156464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 35964750 - 35964782
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaat 360  Q
    |||| ||||||||||||||||||||||||||||    
T  35964750 ttttgacaaaaacaaaacgatattcattcaaat 35964782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 47417977 - 47417945
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaat 360  Q
    ||||||||||||||||| |||||||||||||||    
T  47417977 tttttacaaaaacaaaatgatattcattcaaat 47417945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 11709547 - 11709649
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  11709547 gtaaaggatgaatctgcgaacaaactcacaacatctaaattaatagcatatcacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaa 11709646  T
Q  462 tat 464  Q
    |||    
T  11709647 tat 11709649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 45425906 - 45426008
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| |||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45425906 gtaaatgatgaatctgcgaataaactcacagcatccaagttaatagcatataacggtataatgcctacaaaaatatatgataaaattaaagtgaccgaaa 45426005  T
Q  462 tat 464  Q
    |||    
T  45426006 tat 45426008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 25406124 - 25406226
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  25406124 gtaaaagatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 25406223  T
Q  462 tat 464  Q
    |||    
T  25406224 tat 25406226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 38520375 - 38520477
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||  || ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  38520375 gtaaaggatgaatttgtgaacaaactcacaacatccaagttaatagcatataacggtataatgcctacaaaaatatacgataaaattaaagtgactggaa 38520474  T
Q  462 tat 464  Q
    |||    
T  38520475 tat 38520477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 464
Target Start/End: Original strand, 50271986 - 50272082
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||| ||| || ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  50271986 gatgaatctgcgaacaaactcacaacatctaagttaatagcatataacggcataatgcctacaaaaatatatgacaaaattaaagtgactggaatat 50272082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 389 - 464
Target Start/End: Original strand, 30818218 - 30818293
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30818218 acaacatccaagttaatagcatataacgctataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 30818293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 5701500 - 5701398
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  5701500 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacacaaatatatgatgaaattaaagtgaccggaa 5701401  T
Q  462 tat 464  Q
    |||    
T  5701400 tat 5701398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 7998030 - 7997928
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| |||||| ||||| ||| |||| ||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  7998030 gtaaaggatgaatctgcaaacaaactcacatcatccaagttaataacatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 7997931  T
Q  462 tat 464  Q
    |||    
T  7997930 tat 7997928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 9687045 - 9687147
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  9687045 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 9687144  T
Q  462 tat 464  Q
    |||    
T  9687145 tat 9687147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 19715735 - 19715837
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| |||||||| ||| |||| ||||||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||||    
T  19715735 gtaaaggatgaatctgcgaataaactcacagcatccaagttaatagcatataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 19715834  T
Q  462 tat 464  Q
    |||    
T  19715835 tat 19715837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 370 - 463
Target Start/End: Original strand, 18569159 - 18569252
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||||| |||||||| |||||||| || |||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  18569159 tgaatttgcgaataaactcacaacatccaaattaatagcatataacgacataatgcctacaaaagtatatgataaaattaaagtgaccggaata 18569252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 50148612 - 50148509
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| ||  |||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||    
T  50148612 tgtaaaggatgaatctgcgaaacaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccgga 50148513  T
Q  461 atat 464  Q
    ||||    
T  50148512 atat 50148509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 40880853 - 40880955
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| |||| || ||| || ||||| |||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| |||    
T  40880853 gtaaatgatgcatctgcgaacaaactcacaacatccaagttaatagcatataacagcataatgcctacaaaaatatatgataaaattaaagtgaccagaa 40880952  T
Q  462 tat 464  Q
    |||    
T  40880953 tat 40880955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 51868485 - 51868587
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| | |||||    
T  51868485 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaataacatataacggcataatgcctacaaaaatatatgataaaattaaagtcatcggaa 51868584  T
Q  462 tat 464  Q
    |||    
T  51868585 tat 51868587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 51872104 - 51872002
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  51872104 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaa 51872005  T
Q  462 tat 464  Q
    |||    
T  51872004 tat 51872002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 28035359 - 28035278
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||| ||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  28035359 aaactcacaacatcaaagttaataacatataacggcataatgcctacaaaaatttatgataaaattaaagtgaccggaatat 28035278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 50165939 - 50166040
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| |||    
T  50165939 gtaaaggatgaatctgtgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccagaa 50166038  T
Q  462 ta 463  Q
    ||    
T  50166039 ta 50166040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 5324420 - 5324500
Alignment:
Q  384 aacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  5324420 aactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccgaaatat 5324500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 19723554 - 19723452
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| |||||||| ||| |||| ||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||| |||| ||    
T  19723554 gtaaaggatgaatctgcgaataaactcacagcatccaagttaataacatataacgacataatgcctacaaaaatatatgataaaattaaagtaaccgaaa 19723455  T
Q  462 tat 464  Q
    |||    
T  19723454 tat 19723452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 33291258 - 33291360
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||| ||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  33291258 gtaaatgatgaatctgctaacaaactcacagcatccaagttaacagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 33291357  T
Q  462 tat 464  Q
    |||    
T  33291358 tat 33291360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 3871628 - 3871547
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||| |||||||| |||||||| |||||    
T  3871628 aaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgttaaaattatagtgaccgaaatat 3871547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 362 - 461
Target Start/End: Complemental strand, 20266543 - 20266444
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| |||||||| |||||||| |||||||| |||||| |||| |||||| |||||||| |||||||| ||||||||||||| ||||    
T  20266543 gtaaaggatgaatctgcgaataaactcacaacatccaagttaattgcatataacggcataatgtctacaaaagtatatgatgaaattaaagtgactggaa 20266444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 365 - 463
Target Start/End: Original strand, 7311949 - 7312047
Alignment:
Q  365 aaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||||| ||| ||| || ||||||| || ||| |||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  7311949 aaagataaatctgcgaacaaacttataatatccaagttaatagtatataacggcataatgcctacaaaaatatatgataaaactaaagtgaccgaaata 7312047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 7342963 - 7342861
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| ||   |||||||||| |||||||||||||||||||||||| |||||||    
T  7342963 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacatcataatgcctataaaaatatatgataaaattaaagtcaccggaa 7342864  T
Q  462 tat 464  Q
    |||    
T  7342863 tat 7342861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 9172731 - 9172629
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| |||||||||||| ||  ||| |||||||||| |||||||||||||||||||||||| |||||||    
T  9172731 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcaaatagcggcataatgcctataaaaatatatgataaaattaaagtcaccggaa 9172632  T
Q  462 tat 464  Q
    |||    
T  9172631 tat 9172629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 9180713 - 9180611
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| |||||||||||| ||  ||| |||||||||| |||||||||||||||||||||||| |||||||    
T  9180713 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcaaatagcggcataatgcctataaaaatatatgataaaattaaagtcaccggaa 9180614  T
Q  462 tat 464  Q
    |||    
T  9180613 tat 9180611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 11454178 - 11454074
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatg--acggtataatgcctacaaaaatatatgataaaattaaagtgaccgg 459  Q
    ||||| ||||||| ||| || ||||| |||||||| |||||||||||||||   | || |||||||||||| |||||||||||||||||||||||||| |    
T  11454178 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatatataatggcataatgcctacataaatatatgataaaattaaagtgaccag 11454079  T
Q  460 aatat 464  Q
    |||||    
T  11454078 aatat 11454074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 363 - 455
Target Start/End: Original strand, 39927396 - 39927488
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtga 455  Q
    |||| ||||||| ||| || ||||| |||||||| || ||||||  |||| |||| |||||||||||||||||||||||||||||||||||||    
T  39927396 taaaggatgaatatgcgaacaaactcacaacatccaaattaataagatataacggcataatgcctacaaaaatatatgataaaattaaagtga 39927488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 9919630 - 9919528
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||| ||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||| |||||||||||||||| |||||||||| ||||||    
T  9919630 tgtaaaggataaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgc-tacaaaaatatatgatcaaattaaagtcaccgga 9919532  T
Q  461 atat 464  Q
    ||||    
T  9919531 atat 9919528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 14545724 - 14545657
Alignment:
Q  396 ctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  14545724 ctaagttaatagcgtataacggcataatgcctacaaaaatatatgataaaattaaaatgatcggaata 14545657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 444
Target Start/End: Complemental strand, 48217679 - 48217596
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataa 444  Q
    |||||| ||||||||||| || ||||| |||||||| ||||||||||||||| ||   ||||||||||||||||||||||||||    
T  48217679 tgtaaaggatgaatttgcgaacaaactcacaacatccaagttaatagcatataacaacataatgcctacaaaaatatatgataa 48217596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 27872978 - 27872876
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||  ||||||||| ||||| |||| ||||||| ||||||||||||||||||||||||| |||  ||||    
T  27872978 gtaaatgatgaatctgcgaacaaactcacaacattcaagttaataacatataacggcataatgcttacaaaaatatatgataaaattaaaatgattggaa 27872879  T
Q  462 tat 464  Q
    |||    
T  27872878 tat 27872876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 32676975 - 32677072
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||||||| ||| || ||||| ||| |||| |||||||||     | |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  32676975 gtaaaagatgaatctgcgaacaaactcacatcatccaagttaata-----taacggcataatgcctacaaaaatatatgataaaattaaagtgactggaa 32677069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 34519369 - 34519267
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||  ||| |||||||||||| || | |  ||||||| |||||||||||||||||||||||||||||||||||    
T  34519369 gtaaaggatgaatctgcgaacaaactcacaggatccaagttaatagcaaataatgacataatgcatacaaaaatatatgataaaattaaagtgaccggaa 34519270  T
Q  462 tat 464  Q
    |||    
T  34519269 tat 34519267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 45805669 - 45805770
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||| ||||| |||  ||||| ||||||||||||||||||||||||||||| |||||||    
T  45805669 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaata-catataacgacataatacctacaaaaatatatgataaaattaaagtcaccggaa 45805767  T
Q  462 tat 464  Q
    |||    
T  45805768 tat 45805770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 33817029 - 33817110
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| ||||||||| ||||| | |  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  33817029 aaactcacatcatccaagttaataacatataatgacataatgcctacaaaaatatatgagaaaattaaagtgaccggaatat 33817110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 33876499 - 33876580
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| ||||||||| ||||| | |  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  33876499 aaactcacatcatccaagttaataacatataatgacataatgcctacaaaaatatatgagaaaattaaagtgaccggaatat 33876580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 35584462 - 35584560
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || ||||| ||| |||| ||||||||    ||| || | |||||||||||||||||||||||| ||||||||||||||||||    
T  35584462 gtaaaggatgaatttgcgaacaaactcacagcatccaagttaat----tataacagcataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 35584557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 40646894 - 40646813
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||| ||| ||||||||||| |||  |||||||||||||||||||||||| |||||| ||||||| ||||||    
T  40646894 aaactcacaacatccaagataatagcatataacgacataatgcctacaaaaatatatgatgaaattatagtgaccagaatat 40646813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 41081544 - 41081645
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    |||||| |||||| ||  || ||||| ||||||||  |||||||| ||||| || | ||||||||||||||||||||||||||||||||| ||||| |||    
T  41081544 gtaaaacatgaatctgtgaacaaactcacaacatccgagttaataacatataactgcataatgcctacaaaaatatatgataaaattaaaatgaccagaa 41081643  T
Q  462 ta 463  Q
    ||    
T  41081644 ta 41081645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 31130432 - 31130532
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||  || ||||| ||| |||| |||||||||| |||| |||  |||||||||||||||||| || ||||||||||||||||||||    
T  31130432 tgtaaaggatgaatatgtgaacaaactcacagcatccaagttaatagaatataacgacataatgcctacaaaaatacataataaaattaaagtgaccgga 31130531  T
Q  461 a 461  Q
    |    
T  31130532 a 31130532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 27914965 - 27915046
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| || |||||||||||| |||  | ||| |||||||||||||||||| |||||||||||||||||||||    
T  27914965 aaactcacagcatccaaattaatagcatataacgacaaaatacctacaaaaatatatgatgaaattaaagtgaccggaatat 27915046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 39987592 - 39987528
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||||||||||| || | |||||||||| |||| |||||||||||||||||||||||||||||    
T  39987592 aagttaatagcatataacagcataatgcctataaaa-tatatgataaaattaaagtgaccggaata 39987528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 464
Target Start/End: Complemental strand, 30879309 - 30879214
Alignment:
Q  369 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||| ||| || ||||| ||||||||  ||||||||| |||| ||   |||||| ||||||||||||||||| |||||||||||| ||||||||    
T  30879309 atgaatctgcgaacaaactcacaacatcatagttaatagtatataacaacataatgtctacaaaaatatatgatgaaattaaagtgatcggaatat 30879214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 448
Target Start/End: Complemental strand, 31837076 - 31836989
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaatt 448  Q
    |||||| ||| ||| ||| || ||||| |||  ||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  31837076 tgtaaaggataaatctgcgaacaaactcacagtatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaatt 31836989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 48365627 - 48365707
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||| ||| |||| ||||||||| | ||| |||  ||||| ||||||||||||||||||||||||||||| | |||||||    
T  48365627 aaactcacagcatccaagttaataacttataacgacataattcctacaaaaatatatgataaaattaaagtaatcggaata 48365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 19061140 - 19061071
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaa 432  Q
    |||||||||||| ||| || ||||| |||||||| ||||||||||||||  |||| | ||||||||||||    
T  19061140 taaaagatgaatgtgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaa 19061071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 447
Target Start/End: Complemental strand, 47133135 - 47133051
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    ||||| ||| ||| ||| || ||||| |||||||| ||||||||||||||| |||| | |||||||||||||| ||||||| ||||    
T  47133135 gtaaaggataaatctgcgaacaaactcacaacatccaagttaatagcatataacggcaaaatgcctacaaaaa-atatgatgaaat 47133051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 32679007 - 32679085
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    ||||||| ||| || ||||| |||||||| |||||||| |||||| |||| | |||||||||||||| ||||||| ||||    
T  32679007 gatgaatctgcgaacaaactcacaacatccaagttaatggcatataacggcaaaatgcctacaaaaa-atatgatgaaat 32679085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 24597109 - 24597143
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaattg 362  Q
    |||||||||||| ||||||||||||||||||||||    
T  24597109 tttttacaaaaataaaacgatattcattcaaattg 24597143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 3228577 - 3228548
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  3228577 tttttacaaaaacaaaacgatattcattca 3228548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 21687683 - 21687654
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  21687683 tttttacaaaaacaaaacgatattcattca 21687654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 411
Target Start/End: Complemental strand, 27456716 - 27456667
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcata 411  Q
    ||||||||||||||||| || ||||| |||||| | ||||||||||||||    
T  27456716 gtaaaagatgaatttgcgaacaaactcacaacacccaagttaatagcata 27456667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 447
Target Start/End: Original strand, 37720009 - 37720093
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    ||||||| |||||||||||| ||||| |||||| | |||||||||||||   || | | |||||||||||| | ||||||||||||    
T  37720009 gtaaaaggtgaatttgcaaacaaactcacaacacccaagttaatagcattccacagaaaaatgcctacaaata-atatgataaaat 37720093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 39888406 - 39888365
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcata 411  Q
    ||||| ||| |||||||| |||||||||||||||||||||||    
T  39888406 tgaatctgcgaataaactcacaacatctaagttaatagcata 39888365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 43148967 - 43148864
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  43148967 tgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccgga 43148868  T
Q  461 atat 464  Q
    ||||    
T  43148867 atat 43148864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 781621 - 781525
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||| ||| |||| ||| |||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  781621 gatgaatctgcgaatatactcacaacatccaagttaatagcatataacggcataatgtctacaaaaatatatgataaaattaaagtgaccggaatat 781525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 4954232 - 4954129
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||  || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  4954232 tgtaaaggatgaatatgtgaacaaactcacaacatcaaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccgga 4954133  T
Q  461 atat 464  Q
    ||||    
T  4954132 atat 4954129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 7247198 - 7247096
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  7247198 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 7247099  T
Q  462 tat 464  Q
    |||    
T  7247098 tat 7247096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 27752164 - 27752062
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||||||| | | || | ||| ||| |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  27752164 gtaaaagatgaatctacgaacatactcacagcatccaagttaatagcatataatggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 27752065  T
Q  462 tat 464  Q
    |||    
T  27752064 tat 27752062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 19259673 - 19259754
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19259673 aaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 19259754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 456
Target Start/End: Complemental strand, 34881955 - 34881862
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||| ||||||| |||||| ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  34881955 taaaggatgaatctgcaaacaaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgatataattaaagtgac 34881862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 368 - 464
Target Start/End: Original strand, 18677311 - 18677407
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||| ||| || ||||  |||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18677311 gatgaatctgcgaacaaacacacaacatccaagttaatagcatataacggcataatgcttacaaaaatatatgataaaattaaagtgaccggaatat 18677407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 368 - 463
Target Start/End: Complemental strand, 15571140 - 15571045
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| ||||||    
T  15571140 gatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgactggaata 15571045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 27266699 - 27266801
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  27266699 gtaaatgatgaatctgcgaacaaactcacagcatccaagttaatagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 27266798  T
Q  462 tat 464  Q
    |||    
T  27266799 tat 27266801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 30299083 - 30298981
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || | ||| | |||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||    
T  30299083 gtaaaggatgaatctgcgaacatactcagaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccagaa 30298984  T
Q  462 tat 464  Q
    |||    
T  30298983 tat 30298981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 362 - 453
Target Start/End: Complemental strand, 7242023 - 7241932
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagt 453  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  7242023 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagt 7241932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 3271242 - 3271344
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| | |||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||| |||||    
T  3271242 gtaaaggatgaatctgcgaacaaactcataacatccaagttaatagcatataacgacataatgcttacaaaaatatatgataaaattaaagtgatcggaa 3271341  T
Q  462 tat 464  Q
    |||    
T  3271342 tat 3271344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 369 - 464
Target Start/End: Complemental strand, 16981524 - 16981427
Alignment:
Q  369 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaat--atatgataaaattaaagtgaccggaatat 464  Q
    |||||| ||| || ||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  16981524 atgaatctgcgaacaaactcacaacatccaagttaatagcatataacgatataatgcctacaaaaatatatatgataaaattaaagtcaccggaatat 16981427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 28235827 - 28235722
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatg--acggtataatgcctacaaaaatatatgataaaattaaagtgaccg 458  Q
    |||||| ||||||| ||| || ||||| |||||||| |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||| ||    
T  28235827 tgtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcatatataacggcataatgcctacaaaaatatatgataaaattaaagtgatcg 28235728  T
Q  459 gaatat 464  Q
     |||||    
T  28235727 aaatat 28235722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 41184280 - 41184382
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||| ||||    
T  41184280 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgccggcaaaaatatatgataaaattaaagtgactggaa 41184379  T
Q  462 tat 464  Q
    |||    
T  41184380 tat 41184382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 2057699 - 2057780
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||||||||||||||||  |||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  2057699 aaactcacaacatctaagttaactgcatataacgacataatgcctacaaaaatatatgataaaattatagtgaccggaatat 2057780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 20257536 - 20257637
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  20257536 gtaaatgatgaatctgtgaacaaactcacatcatccaagttaataacatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 20257635  T
Q  462 ta 463  Q
    ||    
T  20257636 ta 20257637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 42886696 - 42886616
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||| |||||||  ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  42886696 aaactcacaacattcaagttaatagcatataacggcataatgcctacaaaaatatattataaaattaaattgaccggaata 42886616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 464
Target Start/End: Complemental strand, 10649856 - 10649781
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| || |||||| ||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  10649856 acaacatccaatttaataccatataacggcataatgcctacaaaaacatatgataaaattaaagtgaccggaatat 10649781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 464
Target Start/End: Original strand, 21060150 - 21060225
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| ||||| |||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  21060150 acaacatccaagttgatagaatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 21060225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 26578455 - 26578389
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  26578455 aagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccgaaatat 26578389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 457
Target Start/End: Complemental strand, 11768232 - 11768143
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgacc 457  Q
    ||||||| ||| || ||||| ||| |||| ||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  11768232 gatgaatctgcgaacaaactcacatcatccaagataatagcatataacggcataatggctacaaaaatatatgataaaattaaagtgacc 11768143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 19280807 - 19280887
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||| |||||||| ||||||||||    
T  19280807 aaactcacaacatccaagttaatagcatataacgc-ataatgcctacaaaaatatatgataatattaaagtcaccggaatat 19280887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 450
Target Start/End: Original strand, 7612898 - 7612986
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaa 450  Q
    ||||||||||||||||| || ||||| |||||||  || |||||||||||  |||  ||||||||||||||||||||||||||||||||    
T  7612898 gtaaaagatgaatttgcgaacaaactcacaacattcaatttaatagcatagaacgacataatgcctacaaaaatatatgataaaattaa 7612986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 389 - 464
Target Start/End: Original strand, 35475205 - 35475280
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| ||||||||||||||| |||   | ||||||||||||||||||||||||||||||||||| |||||||    
T  35475205 acaacatccaagttaatagcatataacgacgttatgcctacaaaaatatatgataaaattaaagtgactggaatat 35475280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 464
Target Start/End: Complemental strand, 30298421 - 30298344
Alignment:
Q  389 acaacatctaagttaatagcatatg--acggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| |||||||||||||||   || | |||||||||||||||||||||||||||||||||||| |||||||||    
T  30298421 acaacatccaagttaatagcatatataacagcataatgcctacaaaaatatatgataaaattaaagtggccggaatat 30298344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 42580091 - 42580025
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||| |||| |||||  || ||||||||||||||||||||||||||||||||||||    
T  42580091 aagttaatagcatataacggcataatatctgcaaaaatatatgataaaattaaagtgaccggaatat 42580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 7150196 - 7150277
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| || |||||||||||| |||| |||||| |||||||||||||||||||||||||||| |||| |||||    
T  7150196 aaactcacagcatccaaattaatagcatataacggcataatgactacaaaaatatatgataaaattaaagtcaccgaaatat 7150277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 22978764 - 22978865
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| |||||||||| | |||| ||  ||||||||||| |||| |||||| |||||||||||| | ||||||| |||||||||| ||    
T  22978764 gtaaaggatgaatttgcgaataaacttaaatcatccaaactaatagcatataacggcataatggctacaaaaatattttataaaatgaaagtgaccgaaa 22978863  T
Q  462 ta 463  Q
    ||    
T  22978864 ta 22978865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 362 - 445
Target Start/End: Original strand, 43008155 - 43008238
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaa 445  Q
    ||||| ||| ||||||  || ||||| | |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  43008155 gtaaaggataaatttgagaacaaactcataacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaa 43008238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 7886779 - 7886880
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||||||| ||  || ||||| |||  ||| ||||||||||||||| || | |||||||||||||||| ||||||||||| || |||||||||||    
T  7886779 gtaaaagatgaatctgtgaacaaactcacagtatccaagttaatagcatataacagaataatgcctacaaaaa-atatgataaaactatagtgaccggaa 7886877  T
Q  462 tat 464  Q
    |||    
T  7886878 tat 7886880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 43261716 - 43261761
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  43261716 ataatgcctacaaaaatatatgataacattaaagtgaccggaatat 43261761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 41418605 - 41418664
Alignment:
Q  405 tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| |||  |||||| | |||||||||||||||||||||||||||| ||||||||    
T  41418605 tagcatataacgacataatgtccacaaaaatatatgataaaattaaagtgagcggaatat 41418664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 455
Target Start/End: Complemental strand, 13468835 - 13468744
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtga 455  Q
    |||| ||||||||| | || ||||| |||| ||| |||||||||||||||||||  | |||||||||| | | ||||||||||| ||||||||    
T  13468835 taaatgatgaatttacgaacaaactcacaaaatcaaagttaatagcatatgacgacaaaatgcctacacata-atatgataaaactaaagtga 13468744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 446
Target Start/End: Original strand, 11976794 - 11976878
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 446  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||| ||||  |||| | |||||||||||| | |||||||||||    
T  11976794 tgtaaaggatgaatctgcgaacaaactcacaacatccaagttaataacataaaacgggaaaatgcctacaaata-atatgataaaa 11976878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 447
Target Start/End: Complemental strand, 13422161 - 13422077
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||  |||| | |||||||||| | | ||||||||||||    
T  13422161 gtaaaggatgaatatgcgaacaaactcacaacatccaagttaatagcataaaacggaaaaatgcctacatata-atatgataaaat 13422077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 446
Target Start/End: Complemental strand, 25980377 - 25980302
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 446  Q
    ||||| |||||| ||||| ||| || | ||||||||||||||| |||| | |||||||||||| | |||||||||||    
T  25980377 tgaatctgcaaacaaactcacatcacccaagttaatagcatataacggcaaaatgcctacaaata-atatgataaaa 25980302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 37483352 - 37483320
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaat 360  Q
    ||||||||||||||||| |||||||||||||||    
T  37483352 tttttacaaaaacaaaatgatattcattcaaat 37483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 446
Target Start/End: Complemental strand, 38598017 - 38597942
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 446  Q
    ||||||||| || ||||| |||||| | ||||||||||||||  |||| | |||||||||||| | |||||||||||    
T  38598017 tgaatttgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaata-atatgataaaa 38597942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 5635 - 5533
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || |||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  5635 gtaaaggatgaatttgcgaacaaacttacagtatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 5536  T
Q  462 tat 464  Q
    |||    
T  5535 tat 5533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 362 - 463
Target Start/End: Original strand, 9986182 - 9986283
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  9986182 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 9986281  T
Q  462 ta 463  Q
    ||    
T  9986282 ta 9986283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 361 - 464
Target Start/End: Original strand, 8971467 - 8971570
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  8971467 tgtaaaggatgaatatgcgaacaaactcacagcatccaagttaatagcatataacggcataatgtctacaaaaatatatgataaaattaaagtgaccgga 8971566  T
Q  461 atat 464  Q
    ||||    
T  8971567 atat 8971570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 4193046 - 4192976
Alignment:
Q  394 atctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4193046 atctaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 4192976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 8806107 - 8806005
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || || || |||||||| ||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  8806107 gtaaaggatgaatctgcgaacaatctcacaacatccaagttaatagcatataacggcaaaatgcctacaaaaatatatgataaaattaaagtgaccggaa 8806008  T
Q  462 tat 464  Q
    |||    
T  8806007 tat 8806005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 27248991 - 27249093
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  27248991 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatgcgtacaaaaatatatgatgaaattaaagtgaccggaa 27249090  T
Q  462 tat 464  Q
    |||    
T  27249091 tat 27249093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 464
Target Start/End: Original strand, 32678952 - 32679052
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  32678952 taaatgatgaatctgcgaacaaactcacaacatc-aagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccggaat 32679050  T
Q  463 at 464  Q
    ||    
T  32679051 at 32679052  T

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Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 27477390 - 27477287
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| || | ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| |    
T  27477390 tgtaaatgatgaatctgcgaacatactcacaacatccaagttaatagtatttaacggtataatgcctacaaaaatatatgataaaattaaagtgaccgaa 27477291  T
Q  461 atat 464  Q
    ||||    
T  27477290 atat 27477287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 357 - 464
Target Start/End: Complemental strand, 32913486 - 32913379
Alignment:
Q  357 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||| ||||| ||||||| ||| || | ||| |||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  32913486 aaatcgtaaaggatgaatctgcgaacatactcacaacatccaagttaatagcatataacggcataatgcatacaaaaatatatgataaaattaaagtgac 32913387  T
Q  457 cggaatat 464  Q
    || |||||    
T  32913386 cgtaatat 32913379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 34600424 - 34600353
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34600424 catccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 34600353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 84021 - 84123
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  84021 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacgaaaatatatgataaaattaaagtggccggaa 84120  T
Q  462 tat 464  Q
    |||    
T  84121 tat 84123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 41431269 - 41431167
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||| ||| ||| |||||||| |||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| | |||||    
T  41431269 gtaaaggataaatctgcgaataaactcacaacatccaagttaatagtatataacggcataatgcctacaaaaatatatgataaaattaaagtcatcggaa 41431170  T
Q  462 tat 464  Q
    |||    
T  41431169 tat 41431167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 363 - 464
Target Start/End: Original strand, 38575326 - 38575427
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || ||||| |||||||| ||| ||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||    
T  38575326 taaaggatgaatctgcgaacaaactcacaacatccaagataatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaat 38575425  T
Q  463 at 464  Q
    ||    
T  38575426 at 38575427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 2808334 - 2808414
Alignment:
Q  384 aacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  2808334 aactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgatcggaatat 2808414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 4228365 - 4228261
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgat-aaaattaaagtgaccgg 459  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||| |||    
T  4228365 tgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaaattaaagtgatcgg 4228266  T
Q  460 aatat 464  Q
    |||||    
T  4228265 aatat 4228261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 369 - 464
Target Start/End: Original strand, 7015558 - 7015653
Alignment:
Q  369 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  7015558 atgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagcgacgggaatat 7015653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 464
Target Start/End: Original strand, 21570256 - 21570350
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| || ||||||||| |||  ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  21570256 tgaatctgcgaacaaacttacagcattcaagttaatagcatacaacggcataatgcctacaaaaatatatgataaaattaaagtgaacggaatat 21570350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 388 - 464
Target Start/End: Original strand, 33229006 - 33229082
Alignment:
Q  388 tacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  33229006 tacatcatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgactggaatat 33229082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 3725421 - 3725319
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| || ||| ||||||||| |||| ||  ||||||||||| ||||  |||||||||||||||||||||| ||||||||||||| |||||    
T  3725421 gtaaaggatgaatctgtaaacaaacttacatcatccaaactaatagcatataacggcgtaatgcctacaaaaatatatgaaaaaattaaagtgatcggaa 3725322  T
Q  462 tat 464  Q
    |||    
T  3725321 tat 3725319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 40659772 - 40659874
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| |||||| ||||| ||||| || || ||||||||||||||||||    
T  40659772 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatggctacagaaataaattatgaaattaaagtgaccggaa 40659871  T
Q  462 tat 464  Q
    |||    
T  40659872 tat 40659874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 17319561 - 17319460
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| || ||||| ||||||||| ||||| |||  |||||||||| | ||||||||||||||||||||||||||||||    
T  17319561 gtaaaggatgaatctgcgaacaaactcacgacatccaagttaataacatataacgacataatgcctatacaaatatatgataaaattaaagtgaccggaa 17319462  T
Q  462 ta 463  Q
    ||    
T  17319461 ta 17319460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 464
Target Start/End: Original strand, 41712628 - 41712731
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||| ||| ||| || ||||| |||| || |||||||||| ||||| || | ||||| ||||||||||||||||||||||||||| ||||||||    
T  41712628 tgtaaatgataaatctgcgaacaaactcacaatatataagttaataacatataactgcataatacctacaaaaatatatgataaaattaaaatgaccgga 41712727  T
Q  461 atat 464  Q
    ||||    
T  41712728 atat 41712731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 20046922 - 20047024
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||| | ||| |||| |||||||||  |||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  20046922 gtaaaggatgaatctgcgaacaaaatcacagcatccaagttaataagatataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaa 20047021  T
Q  462 tat 464  Q
    |||    
T  20047022 tat 20047024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 27949667 - 27949565
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| | | || ||||| |||||||| ||||||||||||||  |||  |||||| ||| ||||||||||||||||||||||||||| ||||    
T  27949667 gtaaatgatgaatctccgaacaaactcacaacatccaagttaatagcatacaacgtcataatgtctataaaaatatatgataaaattaaagtgactggaa 27949568  T
Q  462 tat 464  Q
    |||    
T  27949567 tat 27949565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 403 - 464
Target Start/End: Complemental strand, 6173832 - 6173771
Alignment:
Q  403 aatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||| ||||||||||    
T  6173832 aatagcatataactgcataatgcctacaaaaatatatgataaaattaaagtcaccggaatat 6173771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 45128424 - 45128343
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| |||||||| || |||||||||||| ||   |||||| |||||||||||||||||||||||||||| ||||||||||    
T  45128424 aaactcacaacatccaaattaatagcatataacaacataatgtctacaaaaatatatgataaaattaaagtcaccggaatat 45128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 25087277 - 25087176
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| ||||  |||||||||| |||||||||||||| ||||||||||| ||||    
T  25087277 gtaaaggatgaatctgggaacaaactcacatcatccaagttaatagcatataacggcttaatgcctac-aaaatatatgataagattaaagtgactggaa 25087179  T
Q  462 tat 464  Q
    |||    
T  25087178 tat 25087176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 459144 - 459209
Alignment:
Q  391 aacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||||| ||||||||||||||| | || |||||| |||||||||||||||||||||||||| ||||    
T  459144 aacatcaaagttaatagcatataatggcataatgtctacaaaaatatatgataaaattaaaatgac 459209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 36234192 - 36234147
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  36234192 ataatgcctacaaaaatatatgatgaaattaaagtgaccggaatat 36234147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 22421969 - 22421867
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| |||| |||||||| |||||| |  | ||| || ||||||||||||||||||||| ||||||||||||||    
T  22421969 gtaaaggatgaatctgtgaacaaactcacagcatccaagttaattgcatataatagcatagtgtctacaaaaatatatgataaaactaaagtgaccggaa 22421870  T
Q  462 tat 464  Q
    |||    
T  22421869 tat 22421867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 40625897 - 40625999
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| | |||||  ||||||||||||||| |    |||||||||||||||| |||  |||||||||||||||||||||    
T  40625897 gtaaatgatgaatctgcgaacaaactcataacattcaagttaatagcatataaaaagataatgcctacaaaaacataacataaaattaaagtgaccggaa 40625996  T
Q  462 tat 464  Q
    |||    
T  40625997 tat 40625999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 433
Target Start/End: Original strand, 31580495 - 31580566
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaa 433  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||    
T  31580495 gtaaatgatgaatctgcgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaa 31580566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 464
Target Start/End: Complemental strand, 37994528 - 37994422
Alignment:
Q  357 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||| ||||||||||||| ||| || ||||| |||||| | ||||||||||||||| || | | |||||||||||| | ||||||||||||  || | ||    
T  37994528 aaatcgtaaaagatgaatctgcgaacaaactcacaacacccaagttaatagcatataacagcaaaatgcctacaaata-atatgataaaatctaaatcac 37994430  T
Q  457 cggaatat 464  Q
    ||||||||    
T  37994429 cggaatat 37994422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 9374450 - 9374508
Alignment:
Q  405 tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||||||| |||  |||||||||||||||||| ||||||||||||||||| | ||||||    
T  9374450 tagcatataacgacataatgcctacaaaaatacatgataaaattaaagtgtctggaata 9374508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 447
Target Start/End: Original strand, 30399889 - 30399974
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    |||||| ||||||| ||| || |||||||||||| ||||||||||  |||| ||||| | |||||||||||| | ||||||||||||    
T  30399889 tgtaaaggatgaatctgcgaacaaacttacaacacctaagttaatgacatacgacggcaaaatgcctacaaata-atatgataaaat 30399974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 455
Target Start/End: Original strand, 37613997 - 37614059
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtga 455  Q
    |||| ||||||||| ||||| ||   ||||||| |||||||||||||||||||||||||||||    
T  37613997 catccaagttaataacatataacaacataatgcatacaaaaatatatgataaaattaaagtga 37614059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 359
Target Start/End: Complemental strand, 17319621 - 17319590
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaa 359  Q
    ||||||||||||||||||||||||||||||||    
T  17319621 tttttacaaaaacaaaacgatattcattcaaa 17319590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 3268684 - 3268749
Alignment:
Q  371 gaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaata 436  Q
    |||| |||||| ||||| ||| |||| ||||||||| ||||| | || ||||||||||||||||||    
T  3268684 gaatctgcaaacaaactcacagcatccaagttaataccatataaaggcataatgcctacaaaaata 3268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 4903933 - 4903962
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  4903933 tttttacaaaaacaaaacgatattcattca 4903962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 7646717 - 7646617
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||| ||||| ||| || ||||| |||||| | ||||||||||||||  |||| | |||||||||||| | ||||||||||| | |||| |||| ||    
T  7646717 gtaaaaggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaata-atatgataaaacttaagtcaccgaaa 7646619  T
Q  462 ta 463  Q
    ||    
T  7646618 ta 7646617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 31193124 - 31193153
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  31193124 tttttacaaaaacaaaacgatattcattca 31193153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 32190895 - 32190854
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcata 411  Q
    ||||| |||||||||||| ||||||| |||||||||||||||    
T  32190895 tgaatctgcaaataaactcacaacatttaagttaatagcata 32190854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 37876503 - 37876567
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||||||||||||| ||||| | |||||||||||| | ||||||||||||| |||| |||| ||||    
T  37876503 aagttaatagcatacgacggcaaaatgcctacaaata-atatgataaaatttaagtcaccgaaata 37876567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 38445478 - 38445449
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  38445478 tttttacaaaaacaaaacgatattcattca 38445449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 17994505 - 17994537
Alignment:
Q  325 ttgtttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||| |||||||    
T  17994505 ttgtttttacaaaaacaaaacgataatcattca 17994537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 417
Target Start/End: Complemental strand, 30420911 - 30420855
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacgg 417  Q
    |||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| ||||    
T  30420911 tgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgg 30420855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 361 - 464
Target Start/End: Original strand, 25631365 - 25631468
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| || ||||| ||| |||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  25631365 tgtaaaggatgaatctgcgaacaaactcacatcatccaagttaataacatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccgga 25631464  T
Q  461 atat 464  Q
    ||||    
T  25631465 atat 25631468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 25162670 - 25162568
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| |||||||  || || ||||| |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||    
T  25162670 gtaaaggatgaatccgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 25162571  T
Q  462 tat 464  Q
    |||    
T  25162570 tat 25162568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 39917238 - 39917340
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  |||||||| |||||||| ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||||    
T  39917238 gtaaaggatgaatctgtgaataaactcacaacatccaagttaatagcatataaaggcataatgcctacaaaaatatatgataaaattaaagtgactggaa 39917337  T
Q  462 tat 464  Q
    |||    
T  39917338 tat 39917340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 49552064 - 49552166
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| |||||||    
T  49552064 gtaaaggatgaatctgcgaacaaacttacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaactaaagtcaccggaa 49552163  T
Q  462 tat 464  Q
    |||    
T  49552164 tat 49552166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 29503696 - 29503593
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| || | ||| |||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  29503696 tgtaaaggatgaatatgcgaacatactcacagaatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccgga 29503597  T
Q  461 atat 464  Q
    ||||    
T  29503596 atat 29503593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 36906356 - 36906254
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  36906356 gtaaaggatgaatctgcgaacaaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgactggaa 36906257  T
Q  462 tat 464  Q
    |||    
T  36906256 tat 36906254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 38854876 - 38854978
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  38854876 gtaaaggatgaatatgcgaaaaaactcacatcatccaagttaataacatataacggtataatgactacaaaaatatatgataaaattaaagtgcccggaa 38854975  T
Q  462 tat 464  Q
    |||    
T  38854976 tat 38854978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 44907239 - 44907341
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| || |||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||    
T  44907239 gtaaaggatgaatctgcgaacaaactcacaacatccaaattaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 44907338  T
Q  462 tat 464  Q
    |||    
T  44907339 tat 44907341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 3848759 - 3848861
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| |||||||||||||||  ||| |||||||||||||| |||||||||||||||||||| |||||||    
T  3848759 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatatagcggcataatgcctacaaatatatatgataaaattaaagtcaccggaa 3848858  T
Q  462 tat 464  Q
    |||    
T  3848859 tat 3848861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 32607703 - 32607601
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| | ||||||||||||| | || |||||||||||||||||||||||| |||||||||||| |||||    
T  32607703 gtaaaggatgaatctgcgaacaaactcacaacatccaggttaatagcatataatggcataatgcctacaaaaatatatgatgaaattaaagtgatcggaa 32607604  T
Q  462 tat 464  Q
    |||    
T  32607603 tat 32607601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 12116311 - 12116238
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  12116311 aaactcacaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgac 12116238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 17238018 - 17237937
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| ||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17238018 aaactcacatcatccaagttaatagcatataacgacataatgcctacaaaaatatataataaaattaaagtgaccggaatat 17237937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 22803264 - 22803163
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||| ||||||  || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||    
T  22803264 gtaaaggataaatttgtgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatacatgataaaattaaagtgatcggaa 22803165  T
Q  462 ta 463  Q
    ||    
T  22803164 ta 22803163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 4178768 - 4178697
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| ||||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||||||||    
T  4178768 catccaagttaatagcatataacagcataatgcctagaaaaatatatgataaaattaaagtgaccggaatat 4178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 365 - 464
Target Start/End: Complemental strand, 42719748 - 42719649
Alignment:
Q  365 aaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||| | | || |||||||||  ||  |||||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  42719748 aaagatgaatctacgaacaaacttacagtattcaagttaatggcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 42719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 363 - 464
Target Start/End: Original strand, 30648560 - 30648661
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  ||| |||||| |||||||||||||||||||||||| |||| |||    
T  30648560 taaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacatattgcctataaaaatatatgataaaattaaagttaccgaaat 30648659  T
Q  463 at 464  Q
    ||    
T  30648660 at 30648661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 463
Target Start/End: Complemental strand, 46178802 - 46178701
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||| ||  ||| || ||||| ||| |||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||| |||||||||||||    
T  46178802 gtaaaagataaaactgcgaacaaactcacatcatccaagttaatagcatataacgacataatgcttacaaaaatatatgataaaataaaagtgaccggaa 46178703  T
Q  462 ta 463  Q
    ||    
T  46178702 ta 46178701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 368 - 456
Target Start/End: Complemental strand, 21488321 - 21488233
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    ||||||| ||| |||||||| |||  ||  ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  21488321 gatgaatctgcgaataaactcacagtattcaagttaatagcatataagagtataatgcctacaaaaatatatgataaaattaaagtgac 21488233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 46934873 - 46934774
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| | | || ||||| |||||||| ||||||||||||||| |||     ||||||||||||||||||||||||||||||||||||||||    
T  46934873 gtaaaggatgaatctacgaacaaactcacaacatccaagttaatagcatataacg---acatgcctacaaaaatatatgataaaattaaagtgaccggaa 46934777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 35499040 - 35499140
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || |||||||||||||| || |||||||||||| |||  |||||||  ||||||||||||||| |||||||||||| |||||    
T  35499040 gtaaaggatgaatctgcgaaaaaacttacaacatccaaattaatagcatataacgacataatgc--acaaaaatatatgatgaaattaaagtgatcggaa 35499137  T
Q  462 tat 464  Q
    |||    
T  35499138 tat 35499140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 50611289 - 50611360
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| ||||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  50611289 catccaagttaatagcatataactgtataatgcctacaaaaacatatgataaaatttaagtgacccgaatat 50611360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 2342640 - 2342595
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2342640 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 2342595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 14464738 - 14464645
Alignment:
Q  368 gatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||| ||| || ||||| | |||||| |||||||||| |||| || | ||||||||||||||||||||||| |||||||||||||| ||||    
T  14464738 gatgaatctgcgaacaaactcagaacatccaagttaatagtatataacagcataatgcctacaaaaatatatgacaaaattaaagtgactggaa 14464645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 36734569 - 36734634
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||| ||||    
T  36734569 aagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtaaccgaaata 36734634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 51202151 - 51202196
Alignment:
Q  419 ataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  51202151 ataatgcctacaaaaatatatgataaaattaaagtgaccgggatat 51202196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 21916708 - 21916605
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||    || |||||  ||||||||||||||||||||||||||||||||| |    
T  21916708 tgtaaaggatgaatctgagaacaaactcacatcatccaagttaatagcatacaggggcataatatctacaaaaatatatgataaaattaaagtgaccgaa 21916609  T
Q  461 atat 464  Q
    ||||    
T  21916608 atat 21916605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 464
Target Start/End: Complemental strand, 25850038 - 25849941
Alignment:
Q  367 agatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| ||| || ||||| |||||| | |||||||||| |||| |||  ||||||| ||||||||||||  ||||| |||||||||| |||||||    
T  25850038 agatgaatatgcgaacaaactcacaacacccaagttaatagtatataacgacataatgcttacaaaaatatacaataaagttaaagtgactggaatat 25849941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 451
Target Start/End: Complemental strand, 37169427 - 37169374
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaa 451  Q
    ||||||||||||||| || | |||||||||||||||||||||||| ||||||||    
T  37169427 aagttaatagcatataacagcataatgcctacaaaaatatatgatcaaattaaa 37169374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 434
Target Start/End: Original strand, 50194195 - 50194267
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaa 434  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| | ||||||||||||||    
T  50194195 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcaaaatgcctacaaaaa 50194267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 411
Target Start/End: Original strand, 51628988 - 51629037
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcata 411  Q
    |||||||||||||||||||||||| | ||| ||| |||||||||||||||    
T  51628988 gtaaaagatgaatttgcaaataaattcacatcatttaagttaatagcata 51629037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 4711709 - 4711610
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| |||||| ||||| |||||| | ||||||||||||||  |||| | |||||||||||| | ||||||||||| | |||| |||| |||    
T  4711709 taaaggatgaatctgcaaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaata-atatgataaaacttaagtcaccgaaat 4711611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 38859922 - 38859954
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaat 360  Q
    |||||||||||||||||||||||||||||||||    
T  38859922 tttttacaaaaacaaaacgatattcattcaaat 38859954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 6903155 - 6903105
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcata 411  Q
    |||||| ||||||||| |||| ||||| |||| ||||||||||||||||||    
T  6903155 tgtaaaggatgaatttacaaacaaactcacaatatctaagttaatagcata 6903105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 31794272 - 31794203
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||| ||||||||||||||| |||   || ||||||||| | ||||||||||||||||| |||||||||||    
T  31794272 catccaagttaatagcatataacgacgta-tgcctacaacagtatatgataaaattaaactgaccggaata 31794203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 43017116 - 43017046
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaa 432  Q
    ||||| ||||||| ||  |||||||| |||||| ||||||||||||||||  |||| | ||||||||||||    
T  43017116 gtaaaggatgaatatgtgaataaactcacaacacctaagttaatagcatacaacggcaaaatgcctacaaa 43017046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 953332 - 953361
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  953332 tttttacaaaaacaaaacgatattcattca 953361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 19339476 - 19339447
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  19339476 tttttacaaaaacaaaacgatattcattca 19339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 23799735 - 23799764
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  23799735 tttttacaaaaacaaaacgatattcattca 23799764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 447
Target Start/End: Complemental strand, 27856393 - 27856309
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    ||||||||||||| ||| || ||||| ||| |||| |||||||||||||   |||| | |||||||||||| | ||||||||||||    
T  27856393 gtaaaagatgaatctgcgaacaaactcacatcatccaagttaatagcatgcaacggaaaaatgcctacaaata-atatgataaaat 27856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 412
Target Start/End: Original strand, 30293348 - 30293397
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatat 412  Q
    |||||||||||| |||||||||||| |  ||||| |||||||||||||||    
T  30293348 taaaagatgaatctgcaaataaactcatgacatccaagttaatagcatat 30293397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 40487626 - 40487597
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  40487626 tttttacaaaaacaaaacgatattcattca 40487597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 463
Target Start/End: Original strand, 44959841 - 44959933
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||| |||||||||||| ||| |||| ||||||||||||||  | || | |||||||||||| | ||||||||||| | |||| |||| ||||    
T  44959841 tgaatctgcaaataaactcacagcatccaagttaatagcatacaatggcaaaatgcctacaaata-atatgataaaacttaagtcaccgaaata 44959933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 46304308 - 46304337
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  46304308 tttttacaaaaacaaaacgatattcattca 46304337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 446
Target Start/End: Complemental strand, 40487545 - 40487470
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 446  Q
    ||||||||| || ||||| |||||| | ||||||||| ||||| |||| | |||||||||||| | |||||||||||    
T  40487545 tgaatttgcgaacaaactcacaacacccaagttaataacatataacggcaaaatgcctacaaata-atatgataaaa 40487470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 433531 - 433633
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||    
T  433531 gtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagcatataacagcataatgcctacaaaaatatatgataaaattaaagtcaccggaa 433630  T
Q  462 tat 464  Q
    |||    
T  433631 tat 433633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 32684905 - 32684803
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| | | || ||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  32684905 gtaaaggatgaatctacgaacaaacttacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaactaaagtgaccggaa 32684806  T
Q  462 tat 464  Q
    |||    
T  32684805 tat 32684803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 464
Target Start/End: Original strand, 17222841 - 17222942
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || ||||| |||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  17222841 taaaggatgaatctgcgaacaaactcacaacatccaagttactagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccagaat 17222940  T
Q  463 at 464  Q
    ||    
T  17222941 at 17222942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 35261533 - 35261433
Alignment:
Q  363 taaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaat 462  Q
    |||| ||||||| ||| || ||||| |||| ||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35261533 taaaggatgaatctgcgaacaaactcacaatatccaagttaatagcatacaacggcataatgcctacaaaaatatatgataaaattaaagtgaccggaat 35261434  T
Q  463 a 463  Q
    |    
T  35261433 a 35261433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 389 - 464
Target Start/End: Original strand, 1448697 - 1448772
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  1448697 acaacatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgatcggaatat 1448772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 361 - 464
Target Start/End: Original strand, 22927709 - 22927812
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||||||| || ||||| ||| || | ||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  22927709 tgtaaaggatgaatttgcgaacaaactcacagcaaccaagttgatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtcaccgga 22927808  T
Q  461 atat 464  Q
    ||||    
T  22927809 atat 22927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 42311515 - 42311415
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||| || |||||  || |||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  42311515 gtaaaggatgaatttgcgaacaaact--cagcatccaagttaatagcatataacggcataatgcgtacaaaaatatatgataaaattaaagtgaccggaa 42311418  T
Q  462 tat 464  Q
    |||    
T  42311417 tat 42311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 361 - 463
Target Start/End: Original strand, 13592348 - 13592450
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||    
T  13592348 tgtaaaggatgaatctgcgaacaaactcacagcatcgaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccaga 13592447  T
Q  461 ata 463  Q
    |||    
T  13592448 ata 13592450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 26492602 - 26492500
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||||||||||| ||  || ||||| ||| |||| ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  26492602 gtaaaagatgaatctgtgaacaaactcacagcatccaagttaatagcatataacaacataatgcctacaaaaatatatgataaaattaaagtgaccggaa 26492503  T
Q  462 tat 464  Q
    |||    
T  26492502 tat 26492500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 46822252 - 46822150
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||    
T  46822252 gtaaaggatgaatctgcgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgatcggaa 46822153  T
Q  462 tat 464  Q
    |||    
T  46822152 tat 46822150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 26583947 - 26583844
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacat-ctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    ||||| ||||||| ||| ||||| || ||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||    
T  26583947 gtaaaggatgaatctgcgaataagctcacagcattcaaagttaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtgaccgga 26583848  T
Q  461 atat 464  Q
    ||||    
T  26583847 atat 26583844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 48208138 - 48208035
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaa-tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    ||||| ||||||| ||| || | ||| |||||||| ||||||| |||||||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  48208138 gtaaaggatgaatctgcgaaaatactcacaacatccaagttaaatagcatataacggcataatgccaacaaaaatatatgataaaattaaagtgaccgga 48208039  T
Q  461 atat 464  Q
    ||||    
T  48208038 atat 48208035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 2843081 - 2843183
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| |||||||| ||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||    
T  2843081 gtaaaggatgaatatgtgaacaaactcacagcatctaagctaatagcatataacgacataatgcctacaaaaatatatgatgaaattaaagtgaccggaa 2843180  T
Q  462 tat 464  Q
    |||    
T  2843181 tat 2843183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 7640615 - 7640717
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||  |||||||||| ||||||||||||| |||||||||||||| |||    
T  7640615 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcatataacgacataatgcctataaaaatatatgatgaaattaaagtgaccagaa 7640714  T
Q  462 tat 464  Q
    |||    
T  7640715 tat 7640717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 463
Target Start/End: Complemental strand, 20083576 - 20083474
Alignment:
Q  361 tgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    |||||| ||||||| ||| || ||||| | |||||| ||||||||||| ||| |||  |||||||||||||||||||||||||||| |||||||||||||    
T  20083576 tgtaaatgatgaatctgcgaacaaactaataacatcaaagttaatagcgtataacgacataatgcctacaaaaatatatgataaaactaaagtgaccgga 20083477  T
Q  461 ata 463  Q
    |||    
T  20083476 ata 20083474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 20116818 - 20116717
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| |||||||| ||||||||||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||    
T  20116818 gtaaatgatgaatctgtgaacaaactcacaacatccaagttaatagcatat-acgacataatgcctacaaaaatatttgataaaattaaagtgaccggaa 20116720  T
Q  462 tat 464  Q
    |||    
T  20116719 tat 20116717  T

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Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 369 - 463
Target Start/End: Original strand, 31235631 - 31235725
Alignment:
Q  369 atgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||||||||  || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||||    
T  31235631 atgaatttgtgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatacatgataaaattaaagtgatcggaata 31235725  T

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Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 463
Target Start/End: Original strand, 32521764 - 32521870
Alignment:
Q  357 aaattgtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||| ||||| ||||||||||  || ||||| |||||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||| |    
T  32521764 aaatcgtaaaggatgaatttgtgaacaaactcacaacatccaagttaataacatataacggcataatgcctacaaaaatatatgataaaataaaagtgtc 32521863  T
Q  457 cggaata 463  Q
     ||||||    
T  32521864 tggaata 32521870  T

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Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 34773948 - 34773846
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||| ||| |||||| ||||| ||| |||| |||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  34773948 gtaaaggataaatctgcaaacaaactcacagcatccaagttaatagtatataacgatataatgcctacaaaaatatatgatgaaattaaagtgactggaa 34773849  T
Q  462 tat 464  Q
    |||    
T  34773848 tat 34773846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 35496036 - 35496117
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  35496036 aaactcacatcatccaagttaatagcatataacggcataatgcctacaaaaatatatgatgaaattaaagtgaccgaaatat 35496117  T

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Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 19560199 - 19560133
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||||||||||    
T  19560199 aagttaatagcatataacggcataatgtgtacaaaaatatatgataaaattaaagtgaccggaatat 19560133  T

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Target: chr7; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 21266627 - 21266525
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| |||| ||    
T  21266627 gtaaatgatgaatctgtgaacaaactcacagcatccaagttaatagcatataacggcataatgcctacaaaaatatatgataaaactaaagtcaccgaaa 21266528  T
Q  462 tat 464  Q
    |||    
T  21266527 tat 21266525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 23085758 - 23085656
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| |||  ||| || |||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  23085758 gtaaaggatgaatctgcgaacaaactcacagtatccaaattaatagcatataacgacataatgcctacaaaaatatatgataaaattaaagtcaccggaa 23085659  T
Q  462 tat 464  Q
    |||    
T  23085658 tat 23085656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 23786812 - 23786710
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || ||||| ||| |||||||||| ||||||||| ||   ||||||| |||||||||||||||||||||||||||||| ||||    
T  23786812 gtaaatgatgaatctgcgaacaaactcacagcatctaagttgatagcatataacaacataatgcatacaaaaatatatgataaaattaaagtgacaggaa 23786713  T
Q  462 tat 464  Q
    |||    
T  23786712 tat 23786710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 35667072 - 35667174
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||||||  || ||||| || ||||| ||||||||| ||||| ||   ||||||| |||||||||||||||||||||||||||||||||||    
T  35667072 gtaaatgatgaatttgtgaacaaactcacgacatccaagttaatatcatataacaacataatgcatacaaaaatatatgataaaattaaagtgaccggaa 35667171  T
Q  462 tat 464  Q
    |||    
T  35667172 tat 35667174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 45198873 - 45198975
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||| || | ||| |||||||| |||||||||| |||| |||  ||||| ||||||||||||||||||||||| |||||||||||||    
T  45198873 gtaaaggatgaatctgcgaacatactcacaacatccaagttaatagtatataacgacataatacctacaaaaatatatgataaaatcaaagtgaccggaa 45198972  T
Q  462 tat 464  Q
    |||    
T  45198973 tat 45198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 1485096 - 1485199
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatg-ataaaattaaagtgaccgga 460  Q
    ||||| ||||||| ||| || ||  |||||||||| ||||||||||||||| | || |||||||||||||||||||||| | ||||||||||| ||||||    
T  1485096 gtaaaggatgaatctgcgaacaagtttacaacatccaagttaatagcatataagggcataatgcctacaaaaatatatgaaaaaaattaaagtcaccgga 1485195  T
Q  461 atat 464  Q
    ||||    
T  1485196 atat 1485199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 6559083 - 6559012
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||| ||||||||||||||| |||  ||||||| | ||||||||||||||||||||||||||||||||||||    
T  6559083 catccaagttaatagcatataacgacataatgcttgcaaaaatatatgataaaattaaagtgaccggaatat 6559012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 389 - 464
Target Start/End: Original strand, 42066929 - 42067004
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||| |||||||||||| ||  |||  | |||||||||||||||||||||||||||||||||||||||||||    
T  42066929 acaacatccaagttaatagcacatatcggcgttatgcctacaaaaatatatgataaaattaaagtgaccggaatat 42067004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 463
Target Start/End: Original strand, 17499548 - 17499622
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||||| | ||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||| ||||||    
T  17499548 acaacaacaaagttaatagcatataacgacattatgcctacaaaaatatatgataaaattaaagtgactggaata 17499622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 463
Target Start/End: Complemental strand, 17553666 - 17553592
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||||| | ||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||| ||||||    
T  17553666 acaacaacaaagttaatagcatataacgacattatgcctacaaaaatatatgataaaattaaagtgactggaata 17553592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 46818279 - 46818360
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcc-tacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||| |||||||| ||||||||||||||| |||  |||||| | ||||||||||||||||||||||||||||| |||||||    
T  46818279 aaactcacaacatccaagttaatagcatataacgacataatgtcgtacaaaaatatatgataaaattaaagtgaacggaata 46818360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 6002246 - 6002165
Alignment:
Q  380 aataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    |||||||| ||| |||| ||||||||||||||  | || |||||||||||||||||| ||||||||||||| ||||||||||||    
T  6002246 aataaactcacatcatccaagttaatagcata--atggcataatgcctacaaaaatacatgataaaattaaggtgaccggaata 6002165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 23425244 - 23425307
Alignment:
Q  393 catctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||| ||||||||| ||||| |||| |||||||||||||||||||||||||||| |||||||||    
T  23425244 catccaagttaataacatataacggcataatgcctacaaaaatatatgataaaagtaaagtgac 23425307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 46339291 - 46339189
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaa 461  Q
    ||||| ||||||| ||  || ||||| ||| |||| ||||||||| ||||| |||  ||||||| | |||||||||||||| ||||||||||||||||||    
T  46339291 gtaaaggatgaatctgtgaacaaactcacatcatccaagttaataacatataacgacataatgcatgcaaaaatatatgatgaaattaaagtgaccggaa 46339192  T
Q  462 tat 464  Q
    |||    
T  46339191 tat 46339189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 420 - 464
Target Start/End: Original strand, 14627777 - 14627821
Alignment:
Q  420 taatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  14627777 taatgcctacaaaaatatatgataaaattaaagtgactggaatat 14627821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 17611303 - 17611245
Alignment:
Q  405 tagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaata 463  Q
    ||||||||  || |||||||||||||||||||||||||||||||||| |||||| ||||    
T  17611303 tagcatatagcgatataatgcctacaaaaatatatgataaaattaaaatgaccgaaata 17611245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 447
Target Start/End: Complemental strand, 38799004 - 38798928
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    ||||| ||| || ||||| |||||||| |||||||||||||| ||||| | |||||||||||| | ||||||||||||    
T  38799004 tgaatctgcgaacaaactcacaacatccaagttaatagcataagacggcaaaatgcctacaaata-atatgataaaat 38798928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 359
Target Start/End: Original strand, 46244038 - 46244069
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaa 359  Q
    ||||||||||||||||||||||||||||||||    
T  46244038 tttttacaaaaacaaaacgatattcattcaaa 46244069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 453
Target Start/End: Complemental strand, 27341760 - 27341691
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagt 453  Q
    ||||||| |||||| ||||||||||||||| |||| | |||||||||||| | |||| |||||||| ||||    
T  27341760 aaacttataacatcaaagttaatagcatataacggcaaaatgcctacaaata-atattataaaatttaagt 27341691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 42978910 - 42978876
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaattg 362  Q
    |||| ||||||||||||||||||||||||||||||    
T  42978910 ttttgacaaaaacaaaacgatattcattcaaattg 42978876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 42979083 - 42979049
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattcaaattg 362  Q
    |||| ||||||||||||||||||||||||||||||    
T  42979083 ttttgacaaaaacaaaacgatattcattcaaattg 42979049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 43369614 - 43369707
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    ||||| ||| |||||| ||| ||||||||| |||  ||||||||| ||||  |||| | |||||||| ||| | |||||||||||||||||||||    
T  43369614 gtaaaggataaatttgtaaacaaacttacatcatacaagttaatatcatacaacggcaaaatgcctataaata-atatgataaaattaaagtgac 43369707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 4999805 - 4999834
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  4999805 tttttacaaaaacaaaacgatattcattca 4999834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 5348473 - 5348522
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaa 432  Q
    ||||| |||||||| ||||||||||||||  |||||| ||||||||||||    
T  5348473 aaactaacaacatccaagttaatagcatacaacggtaaaatgcctacaaa 5348522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 12141094 - 12141123
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  12141094 tttttacaaaaacaaaacgatattcattca 12141123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 46821528 - 46821557
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  46821528 tttttacaaaaacaaaacgatattcattca 46821557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 48061726 - 48061697
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  48061726 tttttacaaaaacaaaacgatattcattca 48061697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 8892 - 8826
Alignment:
Q  398 aagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  8892 aagttaatagcatataacggcataatgcctacaaaaatatatgataaaattaaagtgaccagaatat 8826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 16181 - 16262
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    ||||| ||| |||| ||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16181 aaactcacatcatccaagttaatagcatataacgacataatgcctacaaaaatatataataaaattaaagtgaccggaatat 16262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 201252 - 201315
Alignment:
Q  401 ttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccggaatat 464  Q
    |||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  201252 ttaatagcatataacggcatgatgcctacaaaaatatatgataaaattaaagtgaccggaatat 201315  T

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Target: scaffold0022 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 362 - 461
Target Start/End: Original strand, 83276 - 83377
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataat--gcctacaaaaatatatgataaaattaaagtgaccgg 459  Q
    ||||| ||||||| ||| || ||||| |||||||| ||||||||||||||| |||| |||||  |||||||||||| |||| ||||||||||||||||||    
T  83276 gtaaatgatgaatctgcgaacaaactcacaacatccaagttaatagcatataacggcataatatgcctacaaaaatgtatggtaaaattaaagtgaccgg 83375  T
Q  460 aa 461  Q
    ||    
T  83376 aa 83377  T

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Target: scaffold0426 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 460
Target Start/End: Complemental strand, 6521 - 6444
Alignment:
Q  383 aaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgaccgga 460  Q
    ||||| |||||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||| |||||||||||||    
T  6521 aaactcacaacatccaagttaatagcatataacgacataatgcatacaaaaatatatgataaaactaaagtgaccgga 6444  T

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Target: scaffold0003 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 389 - 456
Target Start/End: Original strand, 361666 - 361733
Alignment:
Q  389 acaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||||||| ||||||| | ||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  361666 acaacatccaagttaacaacatataacggcataatgcctacaaaaatatatgagaaaattaaagtgac 361733  T

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Target: scaffold0445 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 446
Target Start/End: Complemental strand, 1565 - 1490
Alignment:
Q  370 tgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaa 446  Q
    ||||| |||||| ||||| |||||||| ||||||||||||||  |||| | |||||||||||| | |||||||||||    
T  1565 tgaatctgcaaacaaactcacaacatccaagttaatagcataaaacggcaaaatgcctacaaata-atatgataaaa 1490  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 418 - 456
Target Start/End: Complemental strand, 454094 - 454056
Alignment:
Q  418 tataatgcctacaaaaatatatgataaaattaaagtgac 456  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  454094 tataatgcttacaaaaatatataataaaattaaagtgac 454056  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Complemental strand, 38362 - 38333
Alignment:
Q  328 tttttacaaaaacaaaacgatattcattca 357  Q
    ||||||||||||||||||||||||||||||    
T  38362 tttttacaaaaacaaaacgatattcattca 38333  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 447
Target Start/End: Original strand, 57948 - 58032
Alignment:
Q  362 gtaaaagatgaatttgcaaataaacttacaacatctaagttaatagcatatgacggtataatgcctacaaaaatatatgataaaat 447  Q
    ||||| ||| ||| ||| || ||||| ||| |||| ||||||||||||||| |||| | |||||||||||||| ||||||| ||||    
T  57948 gtaaaggataaatctgcgaacaaactcacagcatccaagttaatagcatataacggcaaaatgcctacaaaaa-atatgatgaaat 58032  T

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