View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12255_low_5 (Length: 302)
Name: NF12255_low_5
Description: NF12255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12255_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 10 - 286
Target Start/End: Original strand, 38123697 - 38123973
Alignment:
| Q |
10 |
aacctgtgaagacgagttagactcaatataaaaccctaataacaacggcagcggtaatttttctttgtctccgatgaaggcgcgaaacacttctccggtg |
109 |
Q |
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| T |
38123697 |
aacctgtaaagacgagttagactcaatataaaaccctaataacaacggcagcggcaatttttctttgtctccgatgaaggcgcgaaacacttctccggtg |
38123796 |
T |
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| Q |
110 |
aaccctcgtcaacaaagaaggtttcttccctcgccttccacctccatagaatccactgaatttccttccccttcctccgtcatacgtaagtcatcaattc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38123797 |
aaccctcgtcaacaaagaaggtttcttccctcgccttccatctccatagaatccactgaatttccttccccttcctccgtcatacgtaagtcatcaattc |
38123896 |
T |
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| Q |
210 |
ggagcttggaagacgatcgaagacacaaaataacagccgaagaatctgttctgcgccgtcagctttggccttcttcc |
286 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
38123897 |
ggagcttggaagacgatcgaagacacaaaataacagctgaagaatctgttctgcgccgtcagctttggccttcttcc |
38123973 |
T |
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