View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12258_low_13 (Length: 218)
Name: NF12258_low_13
Description: NF12258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12258_low_13 |
 | |
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| [»] scaffold0011 (2 HSPs) |
| | |
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| [»] scaffold0002 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0223 (1 HSPs) |
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| [»] scaffold0170 (1 HSPs) |
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| [»] scaffold0010 (1 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0291 (1 HSPs) |
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| [»] scaffold0006 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 15 - 177
Target Start/End: Original strand, 22405436 - 22405598
Alignment:
| Q |
15 |
agcagagatacaaagtaaaaggataatcaaacagttactatttgttggatgatcaaaacatgaagacattaaaagctagcatgaattccttcgtttttta |
114 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
22405436 |
agcaaagatacaaagtaaaaggataatcaaacagttactatttgttggatgatgaaaacatgaagacattaaaagctagcatgaattccttcgtttttta |
22405535 |
T |
|
| Q |
115 |
ttcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcata |
177 |
Q |
| |
|
||||||||||| |||| ||||||| | |||||||||||||||| |||||||||||||||||| |
|
|
| T |
22405536 |
ttcttgggttttgcactggtttccgacgcaccaaagatggacgattaatccggctcgtgcata |
22405598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 25295071 - 25294997
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| ||||||||||||||||| | |||||| | ||||||||||||||||||| ||||||||| |||||||||| |
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|
| T |
25295071 |
ttggctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactg |
25294997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 7650333 - 7650275
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagaga |
181 |
Q |
| |
|
||||||||||||||||| | |||||||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
7650333 |
tttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagaga |
7650275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 19147067 - 19147010
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
19147067 |
tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagag |
19147010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 3507519 - 3507603
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | |||||||| || ||||||||||||||||||| ||||| |||||||||| |
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|
| T |
3507519 |
tttttttttgttggttttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactg |
3507603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 49021189 - 49021273
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | |||||| | ||||||||||||||||||| ||| ||||| |||||||||| |
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|
| T |
49021189 |
ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
49021273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 54237569 - 54237481
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | ||| || | ||||||||| ||||||||| ||| |||||| |||||||||||||| |
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|
| T |
54237569 |
ttttttctttttggctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgacca |
54237481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 28572198 - 28572269
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
||||| || |||| |||||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||| |
|
|
| T |
28572198 |
tttttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagag |
28572269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 29128039 - 29127952
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||| || |||| ||||||| |||||||| | |||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
29128039 |
tttttttttttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgacca |
29127952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 10040659 - 10040593
Alignment:
| Q |
126 |
cgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||| | |||||||| |||||||| | |||||||||||| ||||| |||||||||| |
|
|
| T |
10040659 |
cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactg |
10040593 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 36043660 - 36043726
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgc |
174 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | |||||||| ||| ||||||||||||||||||| |
|
|
| T |
36043660 |
ttttttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgc |
36043726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 29762156 - 29762225
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||| | |||||||||||||| |||| ||||||||| |||||||||| |
|
|
| T |
29762156 |
tttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactg |
29762225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 34662320 - 34662393
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||||| ||||||||| ||| |||| |||||||||||| |||||| |||||||||| ||||| |||||||| |
|
|
| T |
34662320 |
tttcgcatcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgacca |
34662393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 47219255 - 47219182
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact |
191 |
Q |
| |
|
|||| |||||||||||||||| | || ||||| ||||||||||||||||||| ||| ||||| ||||||||| |
|
|
| T |
47219255 |
ttggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcact |
47219182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 3136680 - 3136764
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | ||||||| ||||||||||||||| ||| ||| ||||| |||||||||| |
|
|
| T |
3136680 |
ttttttttttttggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactg |
3136764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 6462533 - 6462449
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| ||||||||||||||||| | ||| || |||| ||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
6462533 |
ttttttttttttggttttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactg |
6462449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 7310689 - 7310761
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||| || |||| ||||||| |||||||| | ||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
7310689 |
ttttttttttttggctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagag |
7310761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 15320306 - 15320235
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
||||| || |||| ||||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||| |
|
|
| T |
15320306 |
tttttttttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagag |
15320235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 29136033 - 29135950
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| || |||| ||||| ||||||||||| | |||||| | |||| |||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
29136033 |
tttttttttttggctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactg |
29135950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 7648823 - 7648777
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| ||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
7648823 |
caaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactg |
7648777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 19873483 - 19873421
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||| ||| ||||| |||||| | ||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
19873483 |
ttggcttttgcaccagtttccgacccacaaaagatggacgactaatccggctcgtgcgtagag |
19873421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 51060277 - 51060355
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||| |||||||||||||||| | |||||| | |||||||||||||| | || ||| ||||| |||||||||||||| |
|
|
| T |
51060277 |
ttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgacca |
51060355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 31072984 - 31072911
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||||| ||||| || |||||| ||||| ||| |||||||||| |
|
|
| T |
31072984 |
tttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgacca |
31072911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 43330753 - 43330802
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
43330753 |
caccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactg |
43330802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 54261332 - 54261263
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | ||| |||| || |||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
54261332 |
tttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactg |
54261263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 3755655 - 3755607
Alignment:
| Q |
144 |
accaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||| | ||||||||||||||||| ||| |||||| |||||||||| |
|
|
| T |
3755655 |
accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactg |
3755607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 53649843 - 53649764
Alignment:
| Q |
113 |
tattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||| |||||||||||||||| ||| || ||||| || |||||||||||||||| ||| |||||| | |||||||| |
|
|
| T |
53649843 |
tatttttggttttcgcaccggtttccgatc-catcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactg |
53649764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 224426 - 224356
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactga |
193 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||| ||||||| |
|
|
| T |
224426 |
tttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactga |
224356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 186626 - 186553
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||| ||||||||||| | ||| ||||||| |||||||||||||||||||| ||||| ||| |||||||||| |
|
|
| T |
186626 |
tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgacca |
186553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 45; Significance: 8e-17; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 2467103 - 2467187
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
2467103 |
ttttttttttttggctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactg |
2467187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 15884540 - 15884624
Alignment:
| Q |
107 |
gttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact |
191 |
Q |
| |
|
||||||| || |||| |||||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
15884540 |
gttttttttttttggttttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcact |
15884624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 22958859 - 22958807
Alignment:
| Q |
144 |
accaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||| |||| ||||||||| |
|
|
| T |
22958859 |
accaaaggtggacgactaatccggctcatgcatagagacatgcacactgacca |
22958807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 4479296 - 4479365
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||||||||||| |||| ||| ||||| |||||||||| |
|
|
| T |
4479296 |
tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactg |
4479365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 13357941 - 13358013
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||| || |||| ||| |||||||||||| | ||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
13357941 |
ttttttttttttggtttttgcaccggtttccgacccactaaagggggacgactaatccggctcgtgcatagag |
13358013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 8803178 - 8803096
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact |
191 |
Q |
| |
|
||||| || |||| ||||||| |||||||| | ||||| ||||| ||||||||||||||||||| ||||| | |||||||| |
|
|
| T |
8803178 |
tttttttttttggctttcgcatcggtttccgacccaccattgatgggcgactaatccggctcgtgcgtagaggtctgcgcact |
8803096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 14846698 - 14846612
Alignment:
| Q |
110 |
ttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||||| |||| |||||||||| ||||| | |||||||| ||||||||| ||| | ||| ||| ||||| |||||||||||||| |
|
|
| T |
14846698 |
ttttatttttggctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgacca |
14846612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 43027415 - 43027349
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgca |
189 |
Q |
| |
|
||||||| |||||||| | || ||||||||||||||||||||||||| ||| ||||| ||||||| |
|
|
| T |
43027415 |
tttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgca |
43027349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 18374100 - 18374051
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
18374100 |
caccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactg |
18374051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 24837367 - 24837295
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||| || |||| ||||||||| |||||| ||| |||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
24837367 |
ttttttttttttggctttcgcaccagtttccgatc-caccaaaggtggacgactaatcctgctcgtgcttagag |
24837295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 43033011 - 43032942
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||||||| | |||||||| ||| |||||||||||||||||| ||||| |||||||||| |
|
|
| T |
43033011 |
tttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactg |
43032942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 10927731 - 10927647
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| ||||||| |||||||| | ||| |||| || |||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
10927731 |
ttttttttttttggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactg |
10927647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 12606554 - 12606471
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| || |||| ||||||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
12606554 |
tttttttttttggctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactg |
12606471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 30788839 - 30788922
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| || |||| |||||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
30788839 |
tttttttttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactg |
30788922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 9633620 - 9633694
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
9633620 |
ttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactg |
9633694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 19089622 - 19089551
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
||||| || |||| |||||||||||||||| | |||||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
19089622 |
tttttttttttggctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagag |
19089551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 2271326 - 2271372
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
2271326 |
caaaggtggacgactaatccggctcgtgcgtagagacatgcgcactg |
2271372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 3601194 - 3601144
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtg |
173 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||||||||||||||||||| |
|
|
| T |
3601194 |
tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtg |
3601144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 13469048 - 13468970
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||| ||||||||||||||||| | |||||| | ||| ||||||||| ||||||||| ||||| ||| |||||||||| |
|
|
| T |
13469048 |
ttggctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgacca |
13468970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 8149782 - 8149843
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggct |
169 |
Q |
| |
|
|||||| || |||| ||||||||||||||||| | |||||||| |||||||||||| ||||| |
|
|
| T |
8149782 |
ttttttttttttggttttcgcaccggtttccaacccaccaaaggtggacgactaattcggct |
8149843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 6606082 - 6606154
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | |||||| | ||||||||||||||||||| ||| ||||| |
|
|
| T |
6606082 |
ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagag |
6606154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 21898773 - 21898689
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | ||| |||| || |||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
21898773 |
ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactg |
21898689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 14783415 - 14783477
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||| |||||||||||||||| | |||||| | ||||||||||||||||||| ||| ||||| |
|
|
| T |
14783415 |
ttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagag |
14783477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 29444760 - 29444834
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||| |||||| | |||||||||||||| ||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
29444760 |
ttggctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactg |
29444834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 5253223 - 5253292
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| ||| ||||||||||| ||| ||||| |||||||||| |
|
|
| T |
5253223 |
tttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactg |
5253292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 32157187 - 32157236
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||||| |||||||| ||||| ||| ||||| ||||||||||| |
|
|
| T |
32157187 |
caccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactg |
32157236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 5029942 - 5029854
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||| || |||| ||||||||| |||||| | || ||||||||| |||||||||| ||| ||| ||||| |||||||||||||| |
|
|
| T |
5029942 |
ttttttttttttggctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgacca |
5029854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 40780861 - 40780934
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||||||||||||| | |||||||| ||||||||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
40780861 |
tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgacca |
40780934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 38166138 - 38166069
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
38166138 |
tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactg |
38166069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 4738744 - 4738660
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | |||||||| |||||||||||| | |||| ||| |||||| |||||||||| |
|
|
| T |
4738744 |
ttttttttttttggctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactg |
4738660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 2559418 - 2559349
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||||||| |||||||||| |||| ||||| |||||||||| |
|
|
| T |
2559418 |
tttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactg |
2559349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 6779302 - 6779253
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
6779302 |
caccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactg |
6779253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 7246646 - 7246715
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| ||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
7246646 |
tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactg |
7246715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 47682382 - 47682451
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| ||||||| ||||||||||| |||||| ||| |||||| |
|
|
| T |
47682382 |
tttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactg |
47682451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 8889128 - 8889064
Alignment:
| Q |
128 |
caccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||| | |||||||| ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
8889128 |
caccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactg |
8889064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 13073654 - 13073580
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||||||||||||| | |||||||| | |||||||||| || || ||| ||||| ||||||||||| |
|
|
| T |
13073654 |
ttgggtttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactg |
13073580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 18531635 - 18531557
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||| |||||||||||||||| | ||| |||| ||||||| ||||| || |||||||| ||| |||||||||||||| |
|
|
| T |
18531635 |
ttggctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactgacca |
18531557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 38168372 - 38168310
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||| ||||||||||||||||| | ||| |||| || |||||||||||||||| ||| ||||| |
|
|
| T |
38168372 |
ttggctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagag |
38168310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 49260660 - 49260734
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| ||| |||||| ||||| | |||||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
49260660 |
ttggcttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactg |
49260734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 1940779 - 1940844
Alignment:
| Q |
125 |
tcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcac |
190 |
Q |
| |
|
|||||||||||| | | |||||||| ||| ||||||||||||||||||| ||||| |||||||| |
|
|
| T |
1940779 |
tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac |
1940844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 5472868 - 5472917
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
5472868 |
caccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactg |
5472917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 14124127 - 14124058
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||||||||| | |||||| | || |||||||||||||||||| ||||| |||||||||| |
|
|
| T |
14124127 |
tttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactg |
14124058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 29895898 - 29895829
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
29895898 |
tttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
29895829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 36145200 - 36145285
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactga |
193 |
Q |
| |
|
|||||| || |||| |||||||||||||||| || ||||| ||||||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
36145200 |
ttttttttttttggctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactga |
36145285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 43458724 - 43458655
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||| |||||||| | || ||||| ||||||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
43458724 |
tttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactg |
43458655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 55703776 - 55703825
Alignment:
| Q |
147 |
aaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||||||| |||||||||||||||| | |||| |||||||||||||| |
|
|
| T |
55703776 |
aaagatggacaactaatccggctcgtgggttgagacatgcgcactgacca |
55703825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 295534 - 295602
Alignment:
| Q |
124 |
ttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||| | | |||||| | ||||||||||||| || |||||| ||||| |||||||||| |
|
|
| T |
295534 |
ttcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactg |
295602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 21429411 - 21429343
Alignment:
| Q |
124 |
ttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||||||| | |||||||| |||||||||| || | ||||||| ||||| |||||||||| |
|
|
| T |
21429411 |
ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactg |
21429343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 42722408 - 42722448
Alignment:
| Q |
152 |
tggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||||||| ||| ||||||||| ||||||||||| |
|
|
| T |
42722408 |
tggacgactaatccgactcatgcatagaggtatgcgcactg |
42722448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 29)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 25540404 - 25540473
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
25540404 |
tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactg |
25540473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 16813165 - 16813222
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||||| | |||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16813165 |
tttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagag |
16813222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 16852444 - 16852501
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||||| | |||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16852444 |
tttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagag |
16852501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 10823181 - 10823097
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | ||| |||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
10823181 |
ttttttttttttggctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactg |
10823097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 44945712 - 44945631
Alignment:
| Q |
110 |
ttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact |
191 |
Q |
| |
|
|||| ||||||| |||||||||||||||| ||| ||| |||| ||| ||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
44945712 |
tttttttcttggctttcgcaccggtttccgatc-cactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcact |
44945631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 2550974 - 2550905
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||| || | ||||||| ||| ||||||||||||||| ||| |||||| |||||||||| |
|
|
| T |
2550974 |
tttcgcaccggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactg |
2550905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 14169609 - 14169678
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||| | | ||||||||||||||||| ||| |||||| |||||||||| |
|
|
| T |
14169609 |
tttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactg |
14169678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 18902530 - 18902599
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| ||||||||| ||||||||| |||||| | |||||||| |
|
|
| T |
18902530 |
tttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactg |
18902599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 10669713 - 10669629
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| ||| |||||||||||| | |||||||| || |||| ||||||| ||||||| |||||| |||||||||| |
|
|
| T |
10669713 |
ttttttttttttggatttagcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactg |
10669629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 12455431 - 12455347
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | |||||| | || ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
12455431 |
ttttttttttttggctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactg |
12455347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 24179689 - 24179617
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||| || |||| ||| |||||||||| | | |||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
24179689 |
ttttttttttttggcttttgcaccggtttttaacccaccaaagatggacgactaatccggctcatgcgtagag |
24179617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 44023401 - 44023361
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaat |
163 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
44023401 |
tttcgcaccggtttccaacccaccaaagatggacgactaat |
44023361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 20612529 - 20612604
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaat-ccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||||||||||| | |||||| | |||||||||||| ||||||| ||||||||| |||||||||| |
|
|
| T |
20612529 |
ttggttttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactg |
20612604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 8410242 - 8410168
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||||||||||| | | ||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
8410242 |
ttggctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactg |
8410168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 22593244 - 22593171
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| ||||||||||||| | | | |||||||| ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
22593244 |
ttggctttcgcaccggttccgacc-caccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
22593171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 25549811 - 25549777
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25549811 |
caaagatggacgactaatccggctcgtgcgtagag |
25549777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 34722763 - 34722713
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||| ||| ||||||||||||||||||| |||||| ||| |||||||||| |
|
|
| T |
34722763 |
caaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgacca |
34722713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 37560256 - 37560206
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||| ||||||| ||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
37560256 |
caaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgacca |
37560206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 2785038 - 2784965
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||||||||||||| | || ||| ||||||||||||||| | ||| ||| ||||| |||||||||||||| |
|
|
| T |
2785038 |
tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgacca |
2784965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 3643887 - 3643956
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||| |||||||| | |||||||| |||||||||||||| |||| ||| ||||| |||||||||| |
|
|
| T |
3643887 |
tttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactg |
3643956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 7787142 - 7787105
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
7787142 |
caccaaagatgggcgactaatccggctcgtgcgtagag |
7787105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 9360748 - 9360817
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | ||| |||| ||| |||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
9360748 |
tttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactg |
9360817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 11069984 - 11069915
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||| |||||||| | |||||| | |||||||||||| | |||||||| ||||| ||||||||||| |
|
|
| T |
11069984 |
tttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactg |
11069915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 12864330 - 12864257
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||||||||||||| | |||||| | ||||||||||||| ||||| ||| |||| |||||||||||||| |
|
|
| T |
12864330 |
tttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgacca |
12864257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 28616379 - 28616448
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||||||| | ||| |||||||| ||||||||| ||||||||| ||||| |||||||||| |
|
|
| T |
28616379 |
tttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactg |
28616448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 35946844 - 35946787
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
||||||||| |||||| | |||||| | ||||||||||||||||||||||| ||||| |
|
|
| T |
35946844 |
tttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagag |
35946787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 7747395 - 7747323
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | ||| |||| || |||||||||||||||| ||| ||||| |
|
|
| T |
7747395 |
ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagag |
7747323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 20116607 - 20116687
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgaccatg |
198 |
Q |
| |
|
|||| |||||||||||||||| | || ||||| |||||| |||||||||||| ||| ||||| ||||||| || ||||| |
|
|
| T |
20116607 |
ttggctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatg |
20116687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 41220756 - 41220672
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | ||| |||| || ||||||||| |||||| ||| ||||| |||||||||| |
|
|
| T |
41220756 |
ttttttttttttggctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactg |
41220672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 37339942 - 37339858
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| ||||||||||||||||| | |||||||| ||| ||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
37339942 |
ttttttttttttggctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactg |
37339858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 8764103 - 8764029
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||||||||||| | |||||| | ||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
8764103 |
ttggctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactg |
8764029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 17642000 - 17642074
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| ||||||||| |||||| | |||||||| ||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
17642000 |
ttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactg |
17642074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 4581683 - 4581752
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
4581683 |
tttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactg |
4581752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 26325919 - 26325846
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||||||||||||| | |||||| | ||||||||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
26325919 |
tttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgacca |
26325846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 9659180 - 9659248
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact |
191 |
Q |
| |
|
||||||||||||||||| | |||||||| ||||||||||||||||||| ||| || || ||||||||| |
|
|
| T |
9659180 |
tttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcact |
9659248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 33418137 - 33418185
Alignment:
| Q |
144 |
accaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
33418137 |
accaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactg |
33418185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 41663842 - 41663930
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | |||||| | |||||||||||||| |||| ||| ||||| |||||||||||||| |
|
|
| T |
41663842 |
ttttttttttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgacca |
41663930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 10422895 - 10422826
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | ||||||| ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
10422895 |
tttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
10422826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 18915989 - 18915917
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||| || |||| ||||||||||||||||| | |||||| | || ||||||||||||||||||| ||||| |
|
|
| T |
18915989 |
ttttttttttttggctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagag |
18915917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 43959817 - 43959891
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||||||||||| ||| ||| |||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
43959817 |
ttggctttcgcaccggtttccgatc-cactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactg |
43959891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 31576552 - 31576605
Alignment:
| Q |
127 |
gcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
31576552 |
gcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagag |
31576605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 50371835 - 50371891
Alignment:
| Q |
123 |
tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcataga |
179 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||| |||||||||||||| |||| |||| |
|
|
| T |
50371835 |
tttcgcaccggtttccgatc-caccaaagatgggcgactaatccggcttgtgcgtaga |
50371891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 5063866 - 5063914
Alignment:
| Q |
144 |
accaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||| ||| |||||||||| ||||||||||||||| || ||||||| |
|
|
| T |
5063866 |
accaaaggtgggcgactaatccagctcgtgcatagagacatacgcactg |
5063914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 17092499 - 17092535
Alignment:
| Q |
144 |
accaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
17092499 |
accaaaggtggacgactaatccggctcgtgcgtagag |
17092535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 35908836 - 35908792
Alignment:
| Q |
152 |
tggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
35908836 |
tggacgactaatccggctcatgcgtagaggcatgcgcactgacca |
35908792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 49078236 - 49078152
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||||||| | ||||| | || |||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
49078236 |
ttttttttttttggctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactg |
49078152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 319545 - 319462
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| || |||| |||||||||||||||| | |||||||| |||||||||||||| |||| ||||||||| |||||||||| |
|
|
| T |
319545 |
tttttttttttggctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactg |
319462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 41158 - 41080
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||| ||||| |||||||||| | |||||||||||| ||||||||||||||||||| ||||| |||| ||||||||| |
|
|
| T |
41158 |
ttggctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgacca |
41080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 25)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 42086439 - 42086365
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||||||||||| | |||||||| ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
42086439 |
ttggctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
42086365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 9805116 - 9805042
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| ||||||||| |||||| | |||||||| ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
9805116 |
ttggctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
9805042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 8513626 - 8513569
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||||||||||||| | |||||||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
8513626 |
tttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagag |
8513569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 14588617 - 14588686
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||| | | |||||||| ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
14588617 |
tttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
14588686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 20682617 - 20682686
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||||||||||| | ||| |||| ||| ||| ||||||||||||||| ||||| |||||||||| |
|
|
| T |
20682617 |
tttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactg |
20682686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 24499094 - 24499019
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactga |
193 |
Q |
| |
|
|||| ||||||||| |||||| | |||||||||||||| | ||||||||||||| | ||||| ||||||||||| |
|
|
| T |
24499094 |
ttggctttcgcaccaatttccaacccaccaaagatggactattaatccggctcgtacgtagaggcatgcgcactga |
24499019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 30349700 - 30349617
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| || |||| |||||||||||||||| | |||| ||| |||||||||||| | |||| ||||||||| |||||||||| |
|
|
| T |
30349700 |
tttttttttttggctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactg |
30349617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 41801061 - 41801018
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagagatatgcgca |
189 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||| ||||||| |
|
|
| T |
41801061 |
caaagatgaacgactaatccggctcgtgcgtagagacatgcgca |
41801018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 1538543 - 1538469
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||||||||||| | |||||| | ||||||| ||||||||||| ||| ||||| |||||||||| |
|
|
| T |
1538543 |
ttggctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactg |
1538469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 7336726 - 7336657
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactga |
193 |
Q |
| |
|
|||||||||||||| ||| |||||||| | ||||| ||||||||||||||| ||||| ||||||||||| |
|
|
| T |
7336726 |
tttcgcaccggtttttatc-caccaaaggtagacgattaatccggctcgtgcgtagaggcatgcgcactga |
7336657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 19572836 - 19572762
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| |||||||| |||||||| | |||||| | || |||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
19572836 |
ttggctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactg |
19572762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 20525945 - 20525876
Alignment:
| Q |
123 |
tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| ||| |||||| | ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
20525945 |
tttcgcaccggtttccgatc-caccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
20525876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 24875429 - 24875383
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| ||||||| ||||||||||||||| |||||| |||||||||| |
|
|
| T |
24875429 |
caaaggtggacgattaatccggctcgtgcgtagagacatgcgcactg |
24875383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 40773385 - 40773331
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgt |
172 |
Q |
| |
|
|||| |||||||||||||||| | ||||||||||| |||||||||||| ||||| |
|
|
| T |
40773385 |
ttggctttcgcaccggtttccgacgcaccaaagatgaacgactaatccgactcgt |
40773331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 42291505 - 42291562
Alignment:
| Q |
123 |
tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||||||||||||| ||| || ||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
42291505 |
tttcgcaccggtttccgatc-catcaaaggtggacgactaatccggctcgtgcgtagag |
42291562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 3653934 - 3653983
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||| ||||| |||||||||| |
|
|
| T |
3653934 |
caccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactg |
3653983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 9168277 - 9168322
Alignment:
| Q |
147 |
aaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| ||||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
9168277 |
aaaggtggacgactaatccggctcatgcgtagaggtatgcgcactg |
9168322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 20255476 - 20255407
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||||||| |||||| | |||||||| ||||||||||||||| ||| ||| ||||| |||||||||| |
|
|
| T |
20255476 |
tttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactg |
20255407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 24463910 - 24463955
Alignment:
| Q |
147 |
aaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24463910 |
aaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactg |
24463955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 36783364 - 36783303
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctc |
170 |
Q |
| |
|
||||| || |||| ||| ||||||||||||| | |||||| | ||||||||||||||||||| |
|
|
| T |
36783364 |
tttttttttttggcttttgcaccggtttccaacccaccaatggtggacgactaatccggctc |
36783303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 38897704 - 38897788
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||| ||||||| ||| |||||||| ||| | ||||||||||||||||| ||||| |||||||||| |
|
|
| T |
38897704 |
ttttttttttttggctttcgcactggtttccgatc-caccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactg |
38897788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 43399235 - 43399166
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||| |||||||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
43399235 |
tttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactg |
43399166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 27648425 - 27648472
Alignment:
| Q |
123 |
tttcgcaccggtttcc-atcacaccaaagatggacgactaatccggctc |
170 |
Q |
| |
|
||||||| |||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
27648425 |
tttcgcatcggtttccgatc-caccaaagatggacgactaatccggctc |
27648472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 39099764 - 39099836
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagag |
180 |
Q |
| |
|
|||||| || |||| ||| |||||||||||| | |||||||| ||| ||||||||||||||| ||| ||||| |
|
|
| T |
39099764 |
ttttttttttttggcttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagag |
39099836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 42861203 - 42861287
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| |||||||||||| ||| | |||||| | ||||||| ||||||||||| ||| ||||| |||||||||| |
|
|
| T |
42861203 |
ttttttttttttggctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactg |
42861287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 41945582 - 41945513
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||| ||||| | |||||||| ||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
41945582 |
tttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactg |
41945513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 1797546 - 1797500
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||| |||||||||| |
|
|
| T |
1797546 |
caaagatggacgactagtccggctcgtgcgtagagacatgcgcactg |
1797500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 34659335 - 34659266
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||| | |||||||| | ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
34659335 |
tttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactg |
34659266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 38578867 - 38578936
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| ||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
38578867 |
tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactg |
38578936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 39475025 - 39474976
Alignment:
| Q |
147 |
aaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||| ||||||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
39475025 |
aaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgacca |
39474976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 48804792 - 48804723
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||| | ||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
48804792 |
tttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg |
48804723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 28744285 - 28744222
Alignment:
| Q |
109 |
tttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgt |
172 |
Q |
| |
|
||||| || |||| ||||||||| |||||| | |||||||| ||||||||||||||||||||| |
|
|
| T |
28744285 |
tttttttttttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgt |
28744222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 3353510 - 3353464
Alignment:
| Q |
146 |
caaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
3353510 |
caaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactg |
3353464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 17748377 - 17748451
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||| ||||||| |||||||| | || ||||| ||||||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
17748377 |
ttggctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactg |
17748451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 173
Target Start/End: Complemental strand, 23658268 - 23658238
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtg |
173 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
23658268 |
caccaaagatggacgactaatccggctcgtg |
23658238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 8734686 - 8734755
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| ||||||||| ||||||||| | ||| |||||||||| |
|
|
| T |
8734686 |
tttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactg |
8734755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 37514998 - 37514957
Alignment:
| Q |
155 |
acgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||| ||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
37514998 |
acgattaatccggctcgtgcgtagagacatgcgcactgacca |
37514957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 3603466 - 3603394
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacc |
195 |
Q |
| |
|
|||||||||| ||||| | ||||||| || |||| ||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
3603466 |
tttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactgacc |
3603394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 4195202 - 4195270
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact |
191 |
Q |
| |
|
||||||| ||||||||| | |||||| | |||||| |||||||||||| ||| ||||| ||||||||| |
|
|
| T |
4195202 |
tttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcact |
4195270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 13095982 - 13095898
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||| || |||| ||| |||||||||||| | |||||||| || ||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
13095982 |
ttttttttttttggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactg |
13095898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 24983403 - 24983487
Alignment:
| Q |
108 |
ttttttattcttgggtttcgcaccggtttccat-cacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact |
191 |
Q |
| |
|
|||||| || |||| ||||||| ||||||||| | |||||| | ||||||||||||||||||| ||| ||||| ||||||||| |
|
|
| T |
24983403 |
ttttttttttttggctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact |
24983487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0223
Description:
Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 16988 - 16915
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||||| ||||||||| | |||||||| || ||||||||| ||||||||| |||||| || ||||||||||| |
|
|
| T |
16988 |
tttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgacca |
16915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 9934 - 9885
Alignment:
| Q |
143 |
caccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
9934 |
caccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactg |
9885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 155706 - 155779
Alignment:
| Q |
118 |
ttgggtttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcact |
191 |
Q |
| |
|
|||| ||||||||||| |||| | |||||||| ||| ||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
155706 |
ttggctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcact |
155779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 42832 - 42905
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
|||||||||||||||| | |||||||| ||| ||||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
42832 |
tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgacca |
42905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0291 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0291
Description:
Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 6964 - 6895
Alignment:
| Q |
123 |
tttcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcactg |
192 |
Q |
| |
|
|||||||||||||||| | |||||||| || ||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
6964 |
tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactg |
6895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 68621 - 68556
Alignment:
| Q |
125 |
tcgcaccggtttccatcacaccaaagatggacgactaatccggctcgtgcatagagatatgcgcac |
190 |
Q |
| |
|
|||||||||||| | | |||||||| ||| ||||||||||||||||||| ||||| |||||||| |
|
|
| T |
68621 |
tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac |
68556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 271107 - 271147
Alignment:
| Q |
156 |
cgactaatccggctcgtgcatagagatatgcgcactgacca |
196 |
Q |
| |
|
||||||| ||||||||||| |||||| |||||||||||||| |
|
|
| T |
271107 |
cgactaacccggctcgtgcgtagagacatgcgcactgacca |
271147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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